Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64513.t1 | XP_003625516.1 | 100 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 6.70E-115 | 423.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64513.t1 | O24466 | 94.4 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 5.9e-112 | 404.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64513.t1 | G7L0L9 | 100.0 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 4.8e-115 | 423.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64513.t1 | MTR_7g100020 | 100.000 | 216 | 0 | 0 | 1 | 216 | 1 | 216 | 9.38e-162 | 445 |
MS.gene64513.t1 | MTR_1g068740 | 94.907 | 216 | 11 | 0 | 1 | 216 | 1 | 216 | 9.36e-157 | 432 |
MS.gene64513.t1 | MTR_1g068730 | 94.444 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 5.91e-156 | 431 |
MS.gene64513.t1 | MTR_1g115325 | 94.634 | 205 | 11 | 0 | 11 | 215 | 11 | 215 | 1.08e-144 | 402 |
MS.gene64513.t1 | MTR_4g063160 | 91.705 | 217 | 15 | 2 | 1 | 215 | 1 | 216 | 3.93e-137 | 383 |
MS.gene64513.t1 | MTR_2g096550 | 77.315 | 216 | 45 | 3 | 1 | 215 | 1 | 213 | 3.29e-117 | 332 |
MS.gene64513.t1 | MTR_1g068740 | 97.163 | 141 | 4 | 0 | 1 | 141 | 1 | 141 | 3.97e-99 | 286 |
MS.gene64513.t1 | MTR_1g068730 | 96.454 | 141 | 5 | 0 | 1 | 141 | 1 | 141 | 4.07e-98 | 283 |
MS.gene64513.t1 | MTR_7g081700 | 61.058 | 208 | 70 | 4 | 11 | 216 | 4 | 202 | 3.64e-87 | 256 |
MS.gene64513.t1 | MTR_8g006970 | 59.903 | 207 | 71 | 4 | 13 | 216 | 20 | 217 | 5.13e-83 | 246 |
MS.gene64513.t1 | MTR_2g005500 | 55.288 | 208 | 81 | 4 | 11 | 215 | 5 | 203 | 1.11e-79 | 237 |
MS.gene64513.t1 | MTR_8g006970 | 65.882 | 170 | 57 | 1 | 11 | 180 | 4 | 172 | 9.37e-79 | 234 |
MS.gene64513.t1 | MTR_4g099470 | 54.945 | 182 | 71 | 4 | 37 | 216 | 6 | 178 | 6.85e-67 | 204 |
MS.gene64513.t1 | MTR_6g021790 | 47.368 | 209 | 103 | 4 | 12 | 214 | 3 | 210 | 1.48e-60 | 189 |
MS.gene64513.t1 | MTR_2g027660 | 46.890 | 209 | 103 | 3 | 12 | 213 | 3 | 210 | 1.07e-59 | 186 |
MS.gene64513.t1 | MTR_3g069510 | 45.327 | 214 | 104 | 4 | 11 | 216 | 8 | 216 | 1.87e-59 | 186 |
MS.gene64513.t1 | MTR_4g064897 | 42.991 | 214 | 116 | 3 | 7 | 216 | 4 | 215 | 4.28e-59 | 185 |
MS.gene64513.t1 | MTR_2g014990 | 44.495 | 218 | 108 | 3 | 7 | 216 | 5 | 217 | 1.63e-57 | 181 |
MS.gene64513.t1 | MTR_4g088090 | 44.954 | 218 | 107 | 5 | 7 | 216 | 5 | 217 | 5.00e-57 | 180 |
MS.gene64513.t1 | MTR_2g005510 | 43.128 | 211 | 114 | 2 | 11 | 216 | 11 | 220 | 5.48e-57 | 180 |
MS.gene64513.t1 | MTR_8g031660 | 43.627 | 204 | 112 | 2 | 12 | 213 | 3 | 205 | 8.22e-57 | 179 |
MS.gene64513.t1 | MTR_4g079350 | 45.413 | 218 | 106 | 5 | 7 | 216 | 5 | 217 | 1.69e-56 | 179 |
MS.gene64513.t1 | MTR_1g078200 | 42.991 | 214 | 107 | 4 | 13 | 214 | 12 | 222 | 1.02e-55 | 177 |
MS.gene64513.t1 | MTR_2g075950 | 43.721 | 215 | 114 | 3 | 7 | 216 | 5 | 217 | 1.91e-55 | 176 |
MS.gene64513.t1 | MTR_1g062760 | 48.309 | 207 | 96 | 7 | 12 | 214 | 11 | 210 | 1.28e-54 | 174 |
MS.gene64513.t1 | MTR_3g086980 | 42.453 | 212 | 108 | 4 | 13 | 214 | 14 | 221 | 2.32e-54 | 173 |
MS.gene64513.t1 | MTR_7g103070 | 45.673 | 208 | 101 | 5 | 12 | 214 | 13 | 213 | 2.85e-54 | 173 |
MS.gene64513.t1 | MTR_8g089985 | 43.396 | 212 | 111 | 4 | 13 | 216 | 15 | 225 | 5.08e-54 | 172 |
MS.gene64513.t1 | MTR_8g031870 | 49.091 | 165 | 83 | 1 | 14 | 178 | 5 | 168 | 3.50e-53 | 169 |
MS.gene64513.t1 | MTR_8g093740 | 44.393 | 214 | 105 | 7 | 6 | 214 | 4 | 208 | 4.81e-53 | 169 |
MS.gene64513.t1 | MTR_2g083860 | 49.123 | 171 | 86 | 1 | 7 | 177 | 5 | 174 | 6.94e-53 | 169 |
MS.gene64513.t1 | MTR_1g029450 | 45.411 | 207 | 103 | 6 | 11 | 213 | 13 | 213 | 2.03e-52 | 168 |
MS.gene64513.t1 | MTR_1g052475 | 41.589 | 214 | 111 | 4 | 13 | 215 | 13 | 223 | 2.36e-52 | 168 |
MS.gene64513.t1 | MTR_2g090865 | 42.991 | 214 | 108 | 4 | 11 | 216 | 7 | 214 | 2.41e-52 | 168 |
MS.gene64513.t1 | MTR_8g031680 | 44.681 | 188 | 97 | 3 | 12 | 195 | 3 | 187 | 6.93e-52 | 167 |
MS.gene64513.t1 | MTR_1g090717 | 42.857 | 217 | 115 | 6 | 1 | 214 | 1 | 211 | 9.24e-52 | 166 |
MS.gene64513.t1 | MTR_7g051940 | 41.951 | 205 | 113 | 3 | 14 | 214 | 12 | 214 | 9.27e-52 | 166 |
MS.gene64513.t1 | MTR_3g096350 | 44.712 | 208 | 103 | 6 | 11 | 214 | 8 | 207 | 1.27e-51 | 166 |
MS.gene64513.t1 | MTR_8g027220 | 46.667 | 165 | 87 | 1 | 13 | 177 | 24 | 187 | 9.06e-51 | 164 |
MS.gene64513.t1 | MTR_8g036220 | 42.647 | 204 | 113 | 2 | 13 | 213 | 14 | 216 | 1.79e-50 | 164 |
MS.gene64513.t1 | MTR_6g079550 | 41.262 | 206 | 116 | 2 | 13 | 214 | 10 | 214 | 7.24e-50 | 162 |
MS.gene64513.t1 | MTR_8g031830 | 49.359 | 156 | 78 | 1 | 14 | 169 | 5 | 159 | 3.23e-49 | 159 |
MS.gene64513.t1 | MTR_7g405790 | 39.130 | 207 | 119 | 4 | 14 | 214 | 14 | 219 | 4.10e-49 | 160 |
MS.gene64513.t1 | MTR_0262s0050 | 45.455 | 165 | 89 | 1 | 13 | 177 | 13 | 176 | 2.44e-47 | 155 |
MS.gene64513.t1 | MTR_2g005500 | 40.865 | 208 | 71 | 5 | 11 | 215 | 5 | 163 | 1.33e-45 | 149 |
MS.gene64513.t1 | MTR_8g107070 | 46.114 | 193 | 95 | 3 | 13 | 201 | 12 | 199 | 4.52e-45 | 151 |
MS.gene64513.t1 | MTR_3g064390 | 38.191 | 199 | 111 | 4 | 17 | 214 | 12 | 199 | 1.43e-44 | 147 |
MS.gene64513.t1 | MTR_1g094220 | 44.242 | 165 | 90 | 2 | 16 | 179 | 32 | 195 | 1.51e-44 | 147 |
MS.gene64513.t1 | MTR_8g103550 | 39.698 | 199 | 109 | 4 | 17 | 215 | 11 | 198 | 1.65e-44 | 147 |
MS.gene64513.t1 | MTR_5g076590 | 36.869 | 198 | 115 | 3 | 17 | 214 | 12 | 199 | 1.20e-43 | 145 |
MS.gene64513.t1 | MTR_1g094220 | 45.283 | 159 | 85 | 2 | 16 | 173 | 32 | 189 | 2.04e-43 | 145 |
MS.gene64513.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 7.11e-43 | 144 |
MS.gene64513.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 1.30e-42 | 144 |
MS.gene64513.t1 | MTR_8g090215 | 38.191 | 199 | 110 | 3 | 17 | 205 | 11 | 206 | 1.27e-41 | 140 |
MS.gene64513.t1 | MTR_7g117910 | 43.312 | 157 | 87 | 2 | 7 | 163 | 12 | 166 | 2.45e-41 | 140 |
MS.gene64513.t1 | MTR_2g102060 | 37.000 | 200 | 115 | 3 | 17 | 216 | 12 | 200 | 3.52e-41 | 139 |
MS.gene64513.t1 | MTR_4g069850 | 39.901 | 203 | 108 | 7 | 5 | 198 | 2 | 199 | 9.07e-41 | 138 |
MS.gene64513.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 11 | 131 | 8 | 129 | 9.96e-41 | 136 |
MS.gene64513.t1 | MTR_3g096350 | 51.538 | 130 | 60 | 3 | 11 | 138 | 8 | 136 | 1.46e-40 | 136 |
MS.gene64513.t1 | MTR_5g013900 | 36.364 | 209 | 127 | 3 | 5 | 213 | 3 | 205 | 1.37e-39 | 135 |
MS.gene64513.t1 | MTR_8g093740 | 41.143 | 175 | 92 | 5 | 44 | 214 | 8 | 175 | 1.66e-39 | 134 |
MS.gene64513.t1 | MTR_3g087160 | 42.405 | 158 | 90 | 1 | 17 | 174 | 11 | 167 | 4.28e-39 | 134 |
MS.gene64513.t1 | MTR_4g098950 | 40.000 | 170 | 97 | 2 | 5 | 174 | 3 | 167 | 1.74e-38 | 132 |
MS.gene64513.t1 | MTR_2g101890 | 37.379 | 206 | 115 | 6 | 15 | 214 | 10 | 207 | 9.83e-37 | 128 |
MS.gene64513.t1 | MTR_4g012940 | 37.864 | 206 | 114 | 6 | 15 | 214 | 8 | 205 | 1.96e-36 | 127 |
MS.gene64513.t1 | MTR_7g103070 | 44.025 | 159 | 77 | 5 | 61 | 214 | 6 | 157 | 2.13e-36 | 125 |
MS.gene64513.t1 | MTR_8g092020 | 37.853 | 177 | 104 | 2 | 15 | 185 | 12 | 188 | 7.67e-36 | 125 |
MS.gene64513.t1 | MTR_1g097420 | 35.176 | 199 | 121 | 3 | 15 | 205 | 8 | 206 | 1.96e-35 | 124 |
MS.gene64513.t1 | MTR_6g039490 | 35.533 | 197 | 121 | 3 | 15 | 205 | 8 | 204 | 2.15e-33 | 120 |
MS.gene64513.t1 | MTR_3g064390 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 7.80e-31 | 111 |
MS.gene64513.t1 | MTR_1g097420 | 30.973 | 226 | 121 | 4 | 15 | 205 | 8 | 233 | 3.18e-29 | 109 |
MS.gene64513.t1 | MTR_4g088055 | 33.533 | 167 | 98 | 5 | 15 | 170 | 6 | 170 | 1.73e-26 | 101 |
MS.gene64513.t1 | MTR_1g059590 | 41.358 | 162 | 87 | 3 | 18 | 179 | 398 | 551 | 1.68e-25 | 103 |
MS.gene64513.t1 | MTR_1g059590 | 41.358 | 162 | 87 | 3 | 18 | 179 | 431 | 584 | 1.71e-25 | 103 |
MS.gene64513.t1 | MTR_2g090875 | 32.934 | 167 | 99 | 5 | 15 | 170 | 6 | 170 | 2.39e-25 | 98.2 |
MS.gene64513.t1 | MTR_4g073250 | 32.979 | 188 | 113 | 6 | 15 | 191 | 6 | 191 | 3.52e-25 | 97.8 |
MS.gene64513.t1 | MTR_3g078260 | 32.335 | 167 | 100 | 5 | 15 | 170 | 8 | 172 | 1.95e-24 | 96.3 |
MS.gene64513.t1 | MTR_3g107717 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.16e-24 | 95.9 |
MS.gene64513.t1 | MTR_3g107713 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.82e-24 | 95.9 |
MS.gene64513.t1 | MTR_3g107707 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.94e-24 | 95.9 |
MS.gene64513.t1 | MTR_8g075240 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 4.65e-23 | 92.4 |
MS.gene64513.t1 | MTR_6g087980 | 31.138 | 167 | 102 | 5 | 15 | 170 | 6 | 170 | 6.14e-23 | 92.4 |
MS.gene64513.t1 | MTR_5g022600 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 8.85e-23 | 91.7 |
MS.gene64513.t1 | MTR_8g031810 | 40.952 | 105 | 48 | 1 | 14 | 118 | 5 | 95 | 7.01e-22 | 86.3 |
MS.gene64513.t1 | MTR_3g078260 | 33.621 | 116 | 74 | 3 | 15 | 129 | 8 | 121 | 3.69e-18 | 78.2 |
MS.gene64513.t1 | MTR_4g113620 | 28.395 | 162 | 103 | 4 | 16 | 177 | 14 | 162 | 3.79e-18 | 79.7 |
MS.gene64513.t1 | MTR_1452s0010 | 47.143 | 70 | 37 | 0 | 40 | 109 | 6 | 75 | 2.03e-17 | 75.1 |
MS.gene64513.t1 | MTR_1686s0010 | 38.571 | 70 | 43 | 0 | 40 | 109 | 6 | 75 | 1.49e-13 | 64.3 |
MS.gene64513.t1 | MTR_5g092060 | 25.466 | 161 | 111 | 3 | 16 | 170 | 105 | 262 | 1.19e-12 | 65.9 |
MS.gene64513.t1 | MTR_2g078000 | 50.000 | 46 | 23 | 0 | 76 | 121 | 46 | 91 | 8.13e-12 | 60.1 |
MS.gene64513.t1 | MTR_5g078090 | 30.488 | 164 | 95 | 6 | 16 | 170 | 20 | 173 | 8.53e-12 | 62.0 |
MS.gene64513.t1 | MTR_1g069245 | 38.462 | 78 | 47 | 1 | 44 | 121 | 122 | 198 | 3.57e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64513.t1 | AT3G53610 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.83e-146 | 405 |
MS.gene64513.t1 | AT3G53610 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.83e-146 | 405 |
MS.gene64513.t1 | AT3G53610 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 3.83e-146 | 405 |
MS.gene64513.t1 | AT5G59840 | 95.146 | 206 | 10 | 0 | 11 | 216 | 11 | 216 | 6.48e-146 | 405 |
MS.gene64513.t1 | AT3G46060 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.17e-145 | 404 |
MS.gene64513.t1 | AT3G46060 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.17e-145 | 404 |
MS.gene64513.t1 | AT3G46060 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 2.17e-145 | 404 |
MS.gene64513.t1 | AT5G03520 | 86.916 | 214 | 27 | 1 | 1 | 214 | 1 | 213 | 6.18e-131 | 367 |
MS.gene64513.t1 | AT3G09900 | 85.116 | 215 | 31 | 1 | 1 | 214 | 1 | 215 | 2.32e-128 | 361 |
MS.gene64513.t1 | AT5G03520 | 86.061 | 165 | 22 | 1 | 50 | 214 | 40 | 203 | 7.71e-104 | 298 |
MS.gene64513.t1 | AT1G02130 | 60.287 | 209 | 71 | 4 | 11 | 216 | 4 | 203 | 1.86e-88 | 259 |
MS.gene64513.t1 | AT4G17530 | 59.135 | 208 | 74 | 4 | 11 | 216 | 4 | 202 | 1.01e-83 | 247 |
MS.gene64513.t1 | AT5G47200 | 58.654 | 208 | 75 | 4 | 11 | 216 | 4 | 202 | 5.40e-83 | 245 |
MS.gene64513.t1 | AT3G11730 | 56.938 | 209 | 78 | 4 | 11 | 215 | 4 | 204 | 9.94e-81 | 240 |
MS.gene64513.t1 | AT4G17160 | 48.058 | 206 | 102 | 3 | 12 | 215 | 3 | 205 | 1.12e-64 | 199 |
MS.gene64513.t1 | AT4G35860 | 48.571 | 210 | 101 | 4 | 12 | 215 | 3 | 211 | 2.25e-64 | 198 |
MS.gene64513.t1 | AT4G17170 | 47.143 | 210 | 104 | 4 | 12 | 215 | 3 | 211 | 8.44e-62 | 192 |
MS.gene64513.t1 | AT1G09630 | 44.860 | 214 | 113 | 2 | 7 | 216 | 4 | 216 | 4.38e-61 | 190 |
MS.gene64513.t1 | AT3G46830 | 43.636 | 220 | 108 | 3 | 7 | 216 | 4 | 217 | 9.40e-58 | 182 |
MS.gene64513.t1 | AT3G46830 | 43.636 | 220 | 108 | 3 | 7 | 216 | 4 | 217 | 9.40e-58 | 182 |
MS.gene64513.t1 | AT4G18430 | 44.907 | 216 | 106 | 3 | 7 | 214 | 5 | 215 | 9.92e-58 | 182 |
MS.gene64513.t1 | AT1G16920 | 45.581 | 215 | 105 | 4 | 7 | 214 | 5 | 214 | 2.56e-57 | 181 |
MS.gene64513.t1 | AT1G07410 | 42.056 | 214 | 117 | 3 | 7 | 216 | 4 | 214 | 3.56e-57 | 180 |
MS.gene64513.t1 | AT5G59150 | 42.326 | 215 | 118 | 3 | 7 | 216 | 4 | 217 | 4.45e-57 | 180 |
MS.gene64513.t1 | AT5G60860 | 44.954 | 218 | 107 | 5 | 7 | 216 | 5 | 217 | 2.68e-56 | 178 |
MS.gene64513.t1 | AT4G39990 | 44.340 | 212 | 107 | 4 | 13 | 216 | 15 | 223 | 1.13e-55 | 177 |
MS.gene64513.t1 | AT3G15060 | 45.413 | 218 | 106 | 5 | 7 | 216 | 5 | 217 | 1.41e-55 | 176 |
MS.gene64513.t1 | AT3G07410 | 42.995 | 207 | 112 | 3 | 13 | 214 | 10 | 215 | 1.49e-55 | 176 |
MS.gene64513.t1 | AT5G45750 | 44.340 | 212 | 112 | 3 | 7 | 214 | 5 | 214 | 2.03e-55 | 176 |
MS.gene64513.t1 | AT4G18800 | 44.076 | 211 | 112 | 3 | 7 | 214 | 5 | 212 | 1.15e-54 | 174 |
MS.gene64513.t1 | AT5G47520 | 43.458 | 214 | 107 | 3 | 13 | 216 | 12 | 221 | 1.70e-54 | 174 |
MS.gene64513.t1 | AT2G33870 | 43.379 | 219 | 110 | 4 | 7 | 216 | 5 | 218 | 2.00e-54 | 173 |
MS.gene64513.t1 | AT2G43130 | 41.176 | 204 | 117 | 2 | 13 | 214 | 10 | 212 | 6.24e-54 | 172 |
MS.gene64513.t1 | AT1G28550 | 43.779 | 217 | 112 | 4 | 7 | 216 | 5 | 218 | 1.21e-53 | 171 |
MS.gene64513.t1 | AT1G05810 | 40.191 | 209 | 119 | 3 | 13 | 216 | 10 | 217 | 3.40e-53 | 170 |
MS.gene64513.t1 | AT1G06400 | 43.256 | 215 | 110 | 4 | 7 | 214 | 5 | 214 | 7.80e-53 | 169 |
MS.gene64513.t1 | AT1G05810 | 40.191 | 209 | 119 | 3 | 13 | 216 | 56 | 263 | 1.12e-52 | 170 |
MS.gene64513.t1 | AT1G01200 | 47.337 | 169 | 89 | 0 | 13 | 181 | 26 | 194 | 1.18e-52 | 169 |
MS.gene64513.t1 | AT5G47960 | 41.706 | 211 | 115 | 3 | 13 | 216 | 13 | 222 | 3.04e-52 | 168 |
MS.gene64513.t1 | AT2G31680 | 47.879 | 165 | 85 | 1 | 13 | 177 | 10 | 173 | 3.39e-52 | 168 |
MS.gene64513.t1 | AT5G03530 | 45.024 | 211 | 105 | 6 | 8 | 214 | 6 | 209 | 7.75e-52 | 166 |
MS.gene64513.t1 | AT5G03530 | 45.024 | 211 | 105 | 6 | 8 | 214 | 6 | 209 | 7.75e-52 | 166 |
MS.gene64513.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 9.89e-52 | 166 |
MS.gene64513.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 9.89e-52 | 166 |
MS.gene64513.t1 | AT1G43890 | 50.898 | 167 | 78 | 4 | 6 | 170 | 4 | 168 | 9.89e-52 | 166 |
MS.gene64513.t1 | AT5G65270 | 40.376 | 213 | 117 | 4 | 13 | 216 | 15 | 226 | 1.23e-51 | 166 |
MS.gene64513.t1 | AT1G73640 | 46.114 | 193 | 99 | 2 | 13 | 201 | 11 | 202 | 2.49e-51 | 166 |
MS.gene64513.t1 | AT3G12160 | 41.315 | 213 | 110 | 4 | 13 | 215 | 13 | 220 | 4.95e-51 | 165 |
MS.gene64513.t1 | AT1G18200 | 50.296 | 169 | 83 | 1 | 13 | 181 | 11 | 178 | 2.23e-50 | 163 |
MS.gene64513.t1 | AT3G54840 | 44.382 | 178 | 94 | 3 | 3 | 179 | 24 | 197 | 2.32e-47 | 155 |
MS.gene64513.t1 | AT3G54840 | 46.154 | 169 | 86 | 3 | 3 | 170 | 24 | 188 | 6.06e-47 | 153 |
MS.gene64513.t1 | AT3G54840 | 45.399 | 163 | 87 | 2 | 18 | 179 | 2 | 163 | 2.56e-46 | 151 |
MS.gene64513.t1 | AT4G35860 | 46.667 | 165 | 81 | 4 | 57 | 215 | 2 | 165 | 1.67e-44 | 146 |
MS.gene64513.t1 | AT3G09910 | 45.312 | 192 | 101 | 4 | 8 | 197 | 6 | 195 | 2.81e-44 | 147 |
MS.gene64513.t1 | AT3G09910 | 45.312 | 192 | 101 | 4 | 8 | 197 | 6 | 195 | 2.81e-44 | 147 |
MS.gene64513.t1 | AT4G19640 | 38.191 | 199 | 113 | 4 | 17 | 215 | 12 | 200 | 4.33e-43 | 144 |
MS.gene64513.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.16e-42 | 141 |
MS.gene64513.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.16e-42 | 141 |
MS.gene64513.t1 | AT3G09910 | 47.126 | 174 | 88 | 4 | 8 | 179 | 6 | 177 | 5.16e-42 | 141 |
MS.gene64513.t1 | AT3G18820 | 39.109 | 202 | 112 | 5 | 5 | 200 | 2 | 198 | 2.96e-41 | 139 |
MS.gene64513.t1 | AT4G39890 | 43.396 | 159 | 88 | 2 | 17 | 174 | 11 | 168 | 6.15e-41 | 139 |
MS.gene64513.t1 | AT5G45130 | 36.683 | 199 | 116 | 5 | 17 | 215 | 12 | 200 | 9.54e-41 | 138 |
MS.gene64513.t1 | AT2G22290 | 37.186 | 199 | 120 | 4 | 17 | 214 | 11 | 205 | 2.42e-40 | 137 |
MS.gene64513.t1 | AT2G44610 | 36.667 | 210 | 127 | 3 | 5 | 214 | 3 | 206 | 5.24e-40 | 136 |
MS.gene64513.t1 | AT5G10260 | 36.364 | 198 | 124 | 2 | 17 | 214 | 11 | 206 | 3.41e-39 | 134 |
MS.gene64513.t1 | AT5G45130 | 36.041 | 197 | 116 | 5 | 19 | 215 | 22 | 208 | 6.20e-39 | 133 |
MS.gene64513.t1 | AT1G22740 | 38.579 | 197 | 113 | 4 | 15 | 205 | 8 | 202 | 3.76e-38 | 131 |
MS.gene64513.t1 | AT5G64990 | 37.374 | 198 | 121 | 3 | 17 | 213 | 9 | 204 | 8.69e-38 | 130 |
MS.gene64513.t1 | AT1G52280 | 41.667 | 168 | 92 | 3 | 15 | 176 | 8 | 175 | 8.88e-38 | 130 |
MS.gene64513.t1 | AT4G09720 | 38.191 | 199 | 114 | 4 | 15 | 205 | 8 | 205 | 1.07e-37 | 130 |
MS.gene64513.t1 | AT5G59150 | 48.760 | 121 | 61 | 1 | 57 | 177 | 3 | 122 | 1.27e-37 | 129 |
MS.gene64513.t1 | AT1G49300 | 36.058 | 208 | 120 | 6 | 5 | 204 | 2 | 204 | 1.31e-37 | 130 |
MS.gene64513.t1 | AT1G49300 | 36.058 | 208 | 120 | 6 | 5 | 204 | 2 | 204 | 1.31e-37 | 130 |
MS.gene64513.t1 | AT3G16100 | 37.864 | 206 | 113 | 4 | 15 | 214 | 8 | 204 | 4.71e-37 | 129 |
MS.gene64513.t1 | AT4G09720 | 37.745 | 204 | 113 | 5 | 15 | 205 | 8 | 210 | 6.48e-36 | 125 |
MS.gene64513.t1 | AT2G21880 | 36.058 | 208 | 111 | 4 | 15 | 205 | 9 | 211 | 1.02e-35 | 125 |
MS.gene64513.t1 | AT5G64990 | 36.098 | 205 | 121 | 4 | 17 | 213 | 9 | 211 | 3.98e-35 | 124 |
MS.gene64513.t1 | AT4G09720 | 35.238 | 210 | 116 | 4 | 15 | 205 | 8 | 216 | 1.55e-34 | 122 |
MS.gene64513.t1 | AT5G39620 | 38.462 | 169 | 92 | 3 | 16 | 175 | 6 | 171 | 9.15e-34 | 120 |
MS.gene64513.t1 | AT4G19640 | 38.843 | 121 | 74 | 0 | 17 | 137 | 12 | 132 | 7.00e-30 | 108 |
MS.gene64513.t1 | AT4G19640 | 38.843 | 121 | 74 | 0 | 17 | 137 | 12 | 132 | 4.56e-29 | 107 |
MS.gene64513.t1 | AT4G09720 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.15e-28 | 106 |
MS.gene64513.t1 | AT4G09720 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.15e-28 | 106 |
MS.gene64513.t1 | AT4G09720 | 38.235 | 170 | 96 | 4 | 44 | 205 | 3 | 171 | 1.15e-28 | 106 |
MS.gene64513.t1 | AT2G21880 | 35.519 | 183 | 96 | 4 | 40 | 205 | 9 | 186 | 1.47e-27 | 103 |
MS.gene64513.t1 | AT2G21880 | 35.519 | 183 | 96 | 4 | 40 | 205 | 9 | 186 | 1.47e-27 | 103 |
MS.gene64513.t1 | AT4G35020 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.21e-27 | 102 |
MS.gene64513.t1 | AT4G35020 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.21e-27 | 102 |
MS.gene64513.t1 | AT4G35020 | 35.928 | 167 | 94 | 6 | 15 | 170 | 6 | 170 | 8.21e-27 | 102 |
MS.gene64513.t1 | AT2G21880 | 32.212 | 208 | 111 | 5 | 15 | 205 | 9 | 203 | 7.15e-26 | 99.8 |
MS.gene64513.t1 | AT2G44690 | 32.335 | 167 | 100 | 5 | 15 | 170 | 18 | 182 | 8.93e-26 | 99.8 |
MS.gene64513.t1 | AT5G20010 | 28.972 | 214 | 142 | 6 | 3 | 212 | 2 | 209 | 1.17e-25 | 99.8 |
MS.gene64513.t1 | AT3G48040 | 32.934 | 167 | 99 | 5 | 15 | 170 | 8 | 172 | 1.38e-25 | 99.4 |
MS.gene64513.t1 | AT5G45970 | 31.138 | 167 | 102 | 5 | 15 | 170 | 6 | 170 | 3.64e-25 | 97.8 |
MS.gene64513.t1 | AT5G62880 | 31.844 | 179 | 109 | 5 | 15 | 182 | 8 | 184 | 4.19e-25 | 98.2 |
MS.gene64513.t1 | AT5G55080 | 32.716 | 162 | 105 | 3 | 16 | 177 | 14 | 171 | 7.48e-25 | 97.8 |
MS.gene64513.t1 | AT3G51300 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 1.15e-24 | 96.7 |
MS.gene64513.t1 | AT1G20090 | 34.132 | 167 | 97 | 6 | 15 | 170 | 5 | 169 | 1.47e-24 | 96.3 |
MS.gene64513.t1 | AT1G75840 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 1.90e-24 | 95.9 |
MS.gene64513.t1 | AT5G55190 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 3.72e-24 | 95.9 |
MS.gene64513.t1 | AT5G20020 | 30.286 | 175 | 117 | 4 | 3 | 177 | 2 | 171 | 5.21e-24 | 95.5 |
MS.gene64513.t1 | AT2G17800 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 5.62e-24 | 94.7 |
MS.gene64513.t1 | AT2G17800 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 5.62e-24 | 94.7 |
MS.gene64513.t1 | AT4G28950 | 31.515 | 165 | 102 | 5 | 15 | 170 | 6 | 168 | 1.70e-23 | 94.0 |
MS.gene64513.t1 | AT4G35950 | 32.335 | 167 | 100 | 6 | 15 | 170 | 6 | 170 | 4.02e-23 | 92.4 |
MS.gene64513.t1 | AT3G48040 | 32.075 | 159 | 95 | 5 | 15 | 162 | 8 | 164 | 5.72e-23 | 91.7 |
MS.gene64513.t1 | AT5G62880 | 32.075 | 159 | 95 | 5 | 15 | 162 | 8 | 164 | 5.77e-22 | 89.4 |
MS.gene64513.t1 | AT4G35020 | 36.207 | 116 | 71 | 3 | 15 | 129 | 6 | 119 | 8.68e-19 | 79.7 |
MS.gene64513.t1 | AT4G35020 | 36.207 | 116 | 71 | 3 | 15 | 129 | 6 | 119 | 8.68e-19 | 79.7 |
MS.gene64513.t1 | AT5G46025 | 35.294 | 102 | 64 | 2 | 77 | 177 | 6 | 106 | 1.52e-15 | 70.5 |
MS.gene64513.t1 | AT3G51290 | 30.769 | 143 | 86 | 6 | 44 | 175 | 636 | 776 | 7.60e-13 | 67.4 |
MS.gene64513.t1 | AT5G37680 | 27.215 | 158 | 108 | 3 | 16 | 170 | 20 | 173 | 4.09e-12 | 62.8 |
MS.gene64513.t1 | AT2G15310 | 28.058 | 139 | 88 | 6 | 16 | 153 | 18 | 145 | 1.35e-11 | 62.0 |
Find 48 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATTAAACTTCTCCTAAT+TGG | 0.159282 | 7.3:-12610255 | MS.gene64513:CDS |
AGCGAATCAAATTGCAAATA+TGG | 0.180362 | 7.3:-12609894 | MS.gene64513:CDS |
TTAGGCTGTGCCAACTTCTA+AGG | 0.253740 | 7.3:-12608625 | MS.gene64513:intron |
CTGCATGTTGTGGTTCTTAA+TGG | 0.257090 | 7.3:-12608098 | None:intergenic |
TCAGCATTGATTTCAAAATA+AGG | 0.261517 | 7.3:-12609936 | MS.gene64513:intron |
GTTGGTTAATCTTGATTGTC+TGG | 0.270643 | 7.3:+12608160 | None:intergenic |
TGACAATGTTAACAAGATAT+TGG | 0.321340 | 7.3:-12608788 | MS.gene64513:CDS |
TCATCTCATGTCCAGATATC+AGG | 0.336735 | 7.3:-12608843 | MS.gene64513:intron |
CAAGCGCTTGCAGATGAATA+TGG | 0.360715 | 7.3:-12608600 | MS.gene64513:CDS |
CCTGGGCAGCCCCTGCTCCC+TGG | 0.373973 | 7.3:+12608133 | None:intergenic |
TGGTACCGCTATCACCAATT+AGG | 0.378492 | 7.3:+12610241 | None:intergenic |
GCAGCCCCTGCTCCCTGGTC+TGG | 0.385231 | 7.3:+12608138 | None:intergenic |
TTGGTTAATCTTGATTGTCT+GGG | 0.400239 | 7.3:+12608161 | None:intergenic |
ATAAGGACAATTGAGCTTGA+TGG | 0.403140 | 7.3:-12609919 | MS.gene64513:CDS |
CCAGGGAGCAGGGGCTGCCC+AGG | 0.406408 | 7.3:-12608133 | MS.gene64513:CDS |
CATGTCCAGATATCAGGAAT+TGG | 0.411917 | 7.3:-12608837 | MS.gene64513:intron |
GCGAATCAAATTGCAAATAT+GGG | 0.419547 | 7.3:-12609893 | MS.gene64513:CDS |
ATCGTAATCAGCACGAGCTC+TGG | 0.430906 | 7.3:+12610281 | None:intergenic |
CCCCTGCTCCCTGGTCTGGT+TGG | 0.433352 | 7.3:+12608142 | None:intergenic |
CGATTTCGAACTATCACAAC+TGG | 0.433779 | 7.3:-12609853 | MS.gene64513:intron |
TTTACTTGTATATGACGTTA+CGG | 0.479177 | 7.3:-12609086 | MS.gene64513:CDS |
AGTTCGAAATCGCTCTTGAC+CGG | 0.481009 | 7.3:+12609864 | None:intergenic |
AACCAACCAGACCAGGGAGC+AGG | 0.489253 | 7.3:-12608144 | MS.gene64513:CDS |
CATATTCATCTGCAAGCGCT+TGG | 0.507439 | 7.3:+12608601 | None:intergenic |
CAAGATTAACCAACCAGACC+AGG | 0.511143 | 7.3:-12608151 | MS.gene64513:CDS |
AGCGCTTGGCCCTTAGAAGT+TGG | 0.514221 | 7.3:+12608615 | None:intergenic |
AGCTTACTACCGTGGAGCCA+TGG | 0.521985 | 7.3:-12609113 | MS.gene64513:CDS |
TAGGCTGTGCCAACTTCTAA+GGG | 0.524551 | 7.3:-12608624 | MS.gene64513:CDS |
AACAAATCTGAATGTGGAGG+AGG | 0.528959 | 7.3:-12608462 | MS.gene64513:CDS |
CTGACATGGATGAAAGCAAA+CGG | 0.531518 | 7.3:-12608753 | MS.gene64513:CDS |
GCTTACTACCGTGGAGCCAT+GGG | 0.548016 | 7.3:-12609112 | MS.gene64513:CDS |
TGACATGGATGAAAGCAAAC+GGG | 0.551245 | 7.3:-12608752 | MS.gene64513:intron |
AATGTTAACAAGATATTGGT+GGG | 0.552268 | 7.3:-12608784 | MS.gene64513:CDS |
TAATCAGCACGAGCTCTGGC+AGG | 0.555758 | 7.3:+12610285 | None:intergenic |
ACCAACCAGACCAGGGAGCA+GGG | 0.559075 | 7.3:-12608143 | MS.gene64513:CDS |
TGGTTAATCTTGATTGTCTG+GGG | 0.566856 | 7.3:+12608162 | None:intergenic |
CAATGTTAACAAGATATTGG+TGG | 0.567581 | 7.3:-12608785 | MS.gene64513:CDS |
TCAGCACGAGCTCTGGCAGG+TGG | 0.599524 | 7.3:+12610288 | None:intergenic |
GTAAAATACCCATGGCTCCA+CGG | 0.601071 | 7.3:+12609104 | None:intergenic |
TGCTAAAACAAATCTGAATG+TGG | 0.604329 | 7.3:-12608468 | MS.gene64513:CDS |
CTTCTCCTAATTGGTGATAG+CGG | 0.620219 | 7.3:-12610246 | MS.gene64513:intron |
TTGCAAATATGGGATACAGC+CGG | 0.620730 | 7.3:-12609883 | MS.gene64513:CDS |
CCAACCAGACCAGGGAGCAG+GGG | 0.621818 | 7.3:-12608142 | MS.gene64513:CDS |
GGTGGGCAACAAAGCTGACA+TGG | 0.624736 | 7.3:-12608767 | MS.gene64513:CDS |
AGATACTGACTCAAAATCTG+AGG | 0.634590 | 7.3:-12608399 | MS.gene64513:intron |
ATATACAAGTAAAATACCCA+TGG | 0.634609 | 7.3:+12609096 | None:intergenic |
TAAAACAAATCTGAATGTGG+AGG | 0.641771 | 7.3:-12608465 | MS.gene64513:CDS |
AAGATTAACCAACCAGACCA+GGG | 0.666777 | 7.3:-12608150 | MS.gene64513:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAAGTC+GGG | + | chr7.3:12610064-12610083 | None:intergenic | 10.0% |
!! | AAAGATGCAATTATAAAAAA+GGG | + | chr7.3:12610091-12610110 | None:intergenic | 15.0% |
!! | ATTTACATATACAAAATCAT+AGG | + | chr7.3:12609228-12609247 | None:intergenic | 15.0% |
!! | TAATATTACAATAACAACAA+AGG | + | chr7.3:12609155-12609174 | None:intergenic | 15.0% |
!! | AATCAATGATAACTAGTAAA+AGG | + | chr7.3:12610037-12610056 | None:intergenic | 20.0% |
!! | CCAAACATAGAAAATAAAAA+TGG | + | chr7.3:12608180-12608199 | None:intergenic | 20.0% |
!! | GAAAGATGCAATTATAAAAA+AGG | + | chr7.3:12610092-12610111 | None:intergenic | 20.0% |
!! | GAATTTAAGGATAATAAAAG+AGG | + | chr7.3:12609398-12609417 | None:intergenic | 20.0% |
!! | TACGAAGATATTACAATTTA+AGG | + | chr7.3:12609427-12609446 | None:intergenic | 20.0% |
!! | TTTATGTACTTATATGCATT+GGG | - | chr7.3:12609708-12609727 | MS.gene64513:intron | 20.0% |
!!! | CCATTTTTATTTTCTATGTT+TGG | - | chr7.3:12608177-12608196 | MS.gene64513:intron | 20.0% |
!!! | GATTATGCTATTTTTCATAT+TGG | - | chr7.3:12608280-12608299 | MS.gene64513:intron | 20.0% |
!!! | TAGTGATTTTTGTTAAACTT+AGG | + | chr7.3:12610159-12610178 | None:intergenic | 20.0% |
!!! | TTATTTTCTATGTTTGGTAA+TGG | - | chr7.3:12608183-12608202 | MS.gene64513:intron | 20.0% |
!!! | TTTTATAATTGCATCTTTCA+CGG | - | chr7.3:12610093-12610112 | MS.gene64513:CDS | 20.0% |
!!! | TTTTATGTACTTATATGCAT+TGG | - | chr7.3:12609707-12609726 | MS.gene64513:intron | 20.0% |
! | AACATAGTGTAAAACATTAC+AGG | + | chr7.3:12608615-12608634 | None:intergenic | 25.0% |
! | AATGTTAACAAGATATTGGT+GGG | - | chr7.3:12609614-12609633 | MS.gene64513:intron | 25.0% |
! | ATATACAAGTAAAATACCCA+TGG | + | chr7.3:12609305-12609324 | None:intergenic | 25.0% |
! | GACATCACAAAAGAATAAAA+GGG | + | chr7.3:12608418-12608437 | None:intergenic | 25.0% |
! | GTTTAACAAAAATCACTATC+CGG | - | chr7.3:12610161-12610180 | MS.gene64513:intron | 25.0% |
! | TAAGGATAATAAAAGAGGAA+TGG | + | chr7.3:12609393-12609412 | None:intergenic | 25.0% |
! | TAATTGTGTTCACTGTATAA+TGG | + | chr7.3:12609456-12609475 | None:intergenic | 25.0% |
! | TATTAGAGAAACTTCTTTCA+TGG | - | chr7.3:12609048-12609067 | MS.gene64513:intron | 25.0% |
! | TGACAATGTTAACAAGATAT+TGG | - | chr7.3:12609610-12609629 | MS.gene64513:intron | 25.0% |
! | TGACATCACAAAAGAATAAA+AGG | + | chr7.3:12608419-12608438 | None:intergenic | 25.0% |
! | TTGTGCAATCATGTAATATT+TGG | - | chr7.3:12608390-12608409 | MS.gene64513:intron | 25.0% |
! | TTTAACAAAAATCACTATCC+GGG | - | chr7.3:12610162-12610181 | MS.gene64513:intron | 25.0% |
! | TTTAAGGAAACACGAATTTA+AGG | + | chr7.3:12609411-12609430 | None:intergenic | 25.0% |
! | TTTACTTGTATATGACGTTA+CGG | - | chr7.3:12609312-12609331 | MS.gene64513:intron | 25.0% |
!! | GTAATGTTTTACACTATGTT+TGG | - | chr7.3:12608615-12608634 | MS.gene64513:CDS | 25.0% |
!!! | CAAAATCTGAGGTTTTATTT+TGG | - | chr7.3:12610010-12610029 | MS.gene64513:intron | 25.0% |
!!! | TCAGCATTGATTTCAAAATA+AGG | - | chr7.3:12608462-12608481 | MS.gene64513:CDS | 25.0% |
ACAAAATGGAAAACTTAGCA+TGG | + | chr7.3:12610207-12610226 | None:intergenic | 30.0% | |
AGCGAATCAAATTGCAAATA+TGG | - | chr7.3:12608504-12608523 | MS.gene64513:intron | 30.0% | |
CAAACAAGTACTTAGTACTT+TGG | - | chr7.3:12608253-12608272 | MS.gene64513:intron | 30.0% | |
CAATGTTAACAAGATATTGG+TGG | - | chr7.3:12609613-12609632 | MS.gene64513:intron | 30.0% | |
CTCATTAAACTTCTCCTAAT+TGG | - | chr7.3:12608143-12608162 | MS.gene64513:CDS | 30.0% | |
GCGAATCAAATTGCAAATAT+GGG | - | chr7.3:12608505-12608524 | MS.gene64513:intron | 30.0% | |
TAAAACAAATCTGAATGTGG+AGG | - | chr7.3:12609933-12609952 | MS.gene64513:CDS | 30.0% | |
TCATTCTCATTCATACTTGT+TGG | - | chr7.3:12609680-12609699 | MS.gene64513:intron | 30.0% | |
TGCTAAAACAAATCTGAATG+TGG | - | chr7.3:12609930-12609949 | MS.gene64513:CDS | 30.0% | |
TGTTTAACGTAAGAGAGAAT+GGG | + | chr7.3:12609370-12609389 | None:intergenic | 30.0% | |
TTGGTTAATCTTGATTGTCT+GGG | + | chr7.3:12610240-12610259 | None:intergenic | 30.0% | |
TTTGTTAAACTTAGGATGCA+AGG | + | chr7.3:12610151-12610170 | None:intergenic | 30.0% | |
! | ACACAAATTCGTCCTTTTTA+TGG | - | chr7.3:12608722-12608741 | MS.gene64513:intron | 30.0% |
! | AGGTTTTCTTTTCAATAGCT+CGG | - | chr7.3:12609956-12609975 | MS.gene64513:intron | 30.0% |
! | ATTTTTGTGAAGCTAGAAGT+TGG | - | chr7.3:12608686-12608705 | MS.gene64513:intron | 30.0% |
! | CACAAATTCGTCCTTTTTAT+GGG | - | chr7.3:12608723-12608742 | MS.gene64513:intron | 30.0% |
! | TTTTATTGCGTTTCTCTGAT+GGG | - | chr7.3:12608324-12608343 | MS.gene64513:intron | 30.0% |
!! | GTTTGATTTTGTGAAAGCTA+CGG | + | chr7.3:12608238-12608257 | None:intergenic | 30.0% |
!! | TTCTAGCTTCACAAAAATCA+TGG | + | chr7.3:12608684-12608703 | None:intergenic | 30.0% |
!!! | ACTAGTTTTATCACAACCAT+TGG | - | chr7.3:12608356-12608375 | MS.gene64513:intron | 30.0% |
!!! | ATGCTATTTTTCATATTGGC+AGG | - | chr7.3:12608284-12608303 | MS.gene64513:intron | 30.0% |
!!! | CTAGTTTTATCACAACCATT+GGG | - | chr7.3:12608357-12608376 | MS.gene64513:intron | 30.0% |
AAGCGCTATTACATGACAAT+AGG | - | chr7.3:12609525-12609544 | MS.gene64513:intron | 35.0% | |
AGTATGAATGAGAATGAGAG+AGG | + | chr7.3:12609677-12609696 | None:intergenic | 35.0% | |
ATAAGGACAATTGAGCTTGA+TGG | - | chr7.3:12608479-12608498 | MS.gene64513:intron | 35.0% | |
ATCCAAACAAGCCCATAAAA+AGG | + | chr7.3:12608737-12608756 | None:intergenic | 35.0% | |
CGCTTATATAAGCTTGCATA+AGG | - | chr7.3:12608803-12608822 | MS.gene64513:CDS | 35.0% | |
GTGTTTAACGTAAGAGAGAA+TGG | + | chr7.3:12609371-12609390 | None:intergenic | 35.0% | |
GTTGGTTAATCTTGATTGTC+TGG | + | chr7.3:12610241-12610260 | None:intergenic | 35.0% | |
GTTTAACGTAAGAGAGAATG+GGG | + | chr7.3:12609369-12609388 | None:intergenic | 35.0% | |
TATCCATCAATGTTCCCTTT+AGG | - | chr7.3:12609755-12609774 | MS.gene64513:intron | 35.0% | |
TGGTTAATCTTGATTGTCTG+GGG | + | chr7.3:12610239-12610258 | None:intergenic | 35.0% | |
TGTAAAACATTACAGGCTTC+TGG | + | chr7.3:12608608-12608627 | None:intergenic | 35.0% | |
! | AACCACAACATGCAGATTTT+TGG | + | chr7.3:12610295-12610314 | None:intergenic | 35.0% |
! | ACCACAACATGCAGATTTTT+GGG | + | chr7.3:12610294-12610313 | None:intergenic | 35.0% |
! | ATGTAACTGATTCCACCTAA+TGG | - | chr7.3:12609123-12609142 | MS.gene64513:intron | 35.0% |
! | CTTTTATTGCGTTTCTCTGA+TGG | - | chr7.3:12608323-12608342 | MS.gene64513:intron | 35.0% |
! | GGTTTTCTTTTCAATAGCTC+GGG | - | chr7.3:12609957-12609976 | MS.gene64513:intron | 35.0% |
! | TGGTTTGAGTTTCCATTTAG+CGG | - | chr7.3:12609068-12609087 | MS.gene64513:CDS | 35.0% |
! | TTTTATCACAACCATTGGGT+AGG | - | chr7.3:12608361-12608380 | MS.gene64513:intron | 35.0% |
! | TTTTTCATATTGGCAGGTGT+TGG | - | chr7.3:12608290-12608309 | MS.gene64513:intron | 35.0% |
!! | AAGCATTGAAAGCCAATTGT+CGG | + | chr7.3:12609493-12609512 | None:intergenic | 35.0% |
!! | AGATACTGACTCAAAATCTG+AGG | - | chr7.3:12609999-12610018 | MS.gene64513:intron | 35.0% |
!!! | TTTGTTTTAGCACTCTGTAC+AGG | + | chr7.3:12609922-12609941 | None:intergenic | 35.0% |
AACAAATCTGAATGTGGAGG+AGG | - | chr7.3:12609936-12609955 | MS.gene64513:intron | 40.0% | |
AAGATTAACCAACCAGACCA+GGG | - | chr7.3:12610248-12610267 | MS.gene64513:CDS | 40.0% | |
AATCATGGCCAGAGAACATT+AGG | + | chr7.3:12608669-12608688 | None:intergenic | 40.0% | |
ACTGATGAGAGAATTCAACC+CGG | + | chr7.3:12610183-12610202 | None:intergenic | 40.0% | |
CACAAAAGAAACCTACCCAA+TGG | + | chr7.3:12608375-12608394 | None:intergenic | 40.0% | |
CATGTCCAGATATCAGGAAT+TGG | - | chr7.3:12609561-12609580 | MS.gene64513:intron | 40.0% | |
CGAATCCAATTCCTGATATC+TGG | + | chr7.3:12609569-12609588 | None:intergenic | 40.0% | |
CGATTTCGAACTATCACAAC+TGG | - | chr7.3:12608545-12608564 | MS.gene64513:intron | 40.0% | |
CTGACATGGATGAAAGCAAA+CGG | - | chr7.3:12609645-12609664 | MS.gene64513:intron | 40.0% | |
CTGATTCCACCTAATGGAAA+AGG | - | chr7.3:12609129-12609148 | MS.gene64513:intron | 40.0% | |
GAACATTAGGACGTGAGAAA+TGG | + | chr7.3:12608656-12608675 | None:intergenic | 40.0% | |
GTCTAGTCACATGCTTAAAG+TGG | + | chr7.3:12608972-12608991 | None:intergenic | 40.0% | |
TAACAGTTCAACCCGACAAT+TGG | - | chr7.3:12609478-12609497 | MS.gene64513:intron | 40.0% | |
TCATCTCATGTCCAGATATC+AGG | - | chr7.3:12609555-12609574 | MS.gene64513:intron | 40.0% | |
TGACATGGATGAAAGCAAAC+GGG | - | chr7.3:12609646-12609665 | MS.gene64513:intron | 40.0% | |
TTGCAAATATGGGATACAGC+CGG | - | chr7.3:12608515-12608534 | MS.gene64513:intron | 40.0% | |
TTTGTGAAAGCTACGGAGTA+TGG | + | chr7.3:12608231-12608250 | None:intergenic | 40.0% | |
! | AGCATTGAAAGCCAATTGTC+GGG | + | chr7.3:12609492-12609511 | None:intergenic | 40.0% |
! | CAACAAAGGCCTTTTCCATT+AGG | + | chr7.3:12609141-12609160 | None:intergenic | 40.0% |
! | CTTCTCCTAATTGGTGATAG+CGG | - | chr7.3:12608152-12608171 | MS.gene64513:CDS | 40.0% |
! | GGTTTGAGTTTCCATTTAGC+GGG | - | chr7.3:12609069-12609088 | MS.gene64513:CDS | 40.0% |
! | GTTTGAGTTTCCATTTAGCG+GGG | - | chr7.3:12609070-12609089 | MS.gene64513:CDS | 40.0% |
! | TTTGAGTTTCCATTTAGCGG+GGG | - | chr7.3:12609071-12609090 | MS.gene64513:CDS | 40.0% |
!! | ACAACATGCAGATTTTTGGG+CGG | + | chr7.3:12610291-12610310 | None:intergenic | 40.0% |
!! | GTCCTTTTTATGGGCTTGTT+TGG | - | chr7.3:12608732-12608751 | MS.gene64513:intron | 40.0% |
!! | GTTTGGTAATGGTATCACTC+TGG | - | chr7.3:12608194-12608213 | MS.gene64513:intron | 40.0% |
AGAAGTTGGCACAGCCTAAA+GGG | + | chr7.3:12609772-12609791 | None:intergenic | 45.0% | |
AGTTCGAAATCGCTCTTGAC+CGG | + | chr7.3:12608537-12608556 | None:intergenic | 45.0% | |
CAAGATTAACCAACCAGACC+AGG | - | chr7.3:12610247-12610266 | MS.gene64513:CDS | 45.0% | |
CAAGCGCTTGCAGATGAATA+TGG | - | chr7.3:12609798-12609817 | MS.gene64513:intron | 45.0% | |
CAGCCTAAAGGGAACATTGA+TGG | + | chr7.3:12609761-12609780 | None:intergenic | 45.0% | |
CATATTCATCTGCAAGCGCT+TGG | + | chr7.3:12609800-12609819 | None:intergenic | 45.0% | |
CGGTAGTAAGCTGCAAAAGA+AGG | + | chr7.3:12609277-12609296 | None:intergenic | 45.0% | |
GCCCAAAAATCTGCATGTTG+TGG | - | chr7.3:12610290-12610309 | MS.gene64513:CDS | 45.0% | |
GTAAAATACCCATGGCTCCA+CGG | + | chr7.3:12609297-12609316 | None:intergenic | 45.0% | |
TAGAAGTTGGCACAGCCTAA+AGG | + | chr7.3:12609773-12609792 | None:intergenic | 45.0% | |
TAGGCTGTGCCAACTTCTAA+GGG | - | chr7.3:12609774-12609793 | MS.gene64513:intron | 45.0% | |
TCTCACGTCCTAATGTTCTC+TGG | - | chr7.3:12608658-12608677 | MS.gene64513:intron | 45.0% | |
TGGGGCTGCAAAGAACAAAA+TGG | + | chr7.3:12610221-12610240 | None:intergenic | 45.0% | |
TGGTACCGCTATCACCAATT+AGG | + | chr7.3:12608160-12608179 | None:intergenic | 45.0% | |
TTAGGCTGTGCCAACTTCTA+AGG | - | chr7.3:12609773-12609792 | MS.gene64513:intron | 45.0% | |
TTGAGTTTCCATTTAGCGGG+GGG | - | chr7.3:12609072-12609091 | MS.gene64513:CDS | 45.0% | |
! | CAAAGGCCTTTTCCATTAGG+TGG | + | chr7.3:12609138-12609157 | None:intergenic | 45.0% |
! | TCTTTTGCAGCTTACTACCG+TGG | - | chr7.3:12609277-12609296 | MS.gene64513:intron | 45.0% |
!! | AAAAAAAAAAAAAAAAAAGT+CGG | + | chr7.3:12610065-12610084 | None:intergenic | 5.0% |
ATCGTAATCAGCACGAGCTC+TGG | + | chr7.3:12608120-12608139 | None:intergenic | 50.0% | |
AGCGCTTGGCCCTTAGAAGT+TGG | + | chr7.3:12609786-12609805 | None:intergenic | 55.0% | |
AGCTTACTACCGTGGAGCCA+TGG | - | chr7.3:12609285-12609304 | MS.gene64513:intron | 55.0% | |
ATGTCTTGCCCCCCGCTAAA+TGG | + | chr7.3:12609083-12609102 | None:intergenic | 55.0% | |
GCTTACTACCGTGGAGCCAT+GGG | - | chr7.3:12609286-12609305 | MS.gene64513:intron | 55.0% | |
GGTGGGCAACAAAGCTGACA+TGG | - | chr7.3:12609631-12609650 | MS.gene64513:intron | 55.0% | |
! | TAATCAGCACGAGCTCTGGC+AGG | + | chr7.3:12608116-12608135 | None:intergenic | 55.0% |
!! | ATGCAGATTTTTGGGCGGCC+TGG | + | chr7.3:12610286-12610305 | None:intergenic | 55.0% |
!! | TGCAGATTTTTGGGCGGCCT+GGG | + | chr7.3:12610285-12610304 | None:intergenic | 55.0% |
AACCAACCAGACCAGGGAGC+AGG | - | chr7.3:12610254-12610273 | MS.gene64513:CDS | 60.0% | |
ACCAACCAGACCAGGGAGCA+GGG | - | chr7.3:12610255-12610274 | MS.gene64513:CDS | 60.0% | |
CCAACCAGACCAGGGAGCAG+GGG | - | chr7.3:12610256-12610275 | MS.gene64513:CDS | 65.0% | |
! | TCAGCACGAGCTCTGGCAGG+TGG | + | chr7.3:12608113-12608132 | None:intergenic | 65.0% |
CCCCTGCTCCCTGGTCTGGT+TGG | + | chr7.3:12610259-12610278 | None:intergenic | 70.0% | |
GCAGCCCCTGCTCCCTGGTC+TGG | + | chr7.3:12610263-12610282 | None:intergenic | 75.0% | |
! | CCAGGGAGCAGGGGCTGCCC+AGG | - | chr7.3:12610265-12610284 | MS.gene64513:CDS | 80.0% |
! | CCTGGGCAGCCCCTGCTCCC+TGG | + | chr7.3:12610268-12610287 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 12608101 | 12610319 | 12608101 | ID=MS.gene64513 |
chr7.3 | mRNA | 12608101 | 12610319 | 12608101 | ID=MS.gene64513.t1;Parent=MS.gene64513 |
chr7.3 | exon | 12610247 | 12610319 | 12610247 | ID=MS.gene64513.t1.exon1;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12610247 | 12610319 | 12610247 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12610042 | 12610114 | 12610042 | ID=MS.gene64513.t1.exon2;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12610042 | 12610114 | 12610042 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12609854 | 12609954 | 12609854 | ID=MS.gene64513.t1.exon3;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12609854 | 12609954 | 12609854 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12609068 | 12609133 | 12609068 | ID=MS.gene64513.t1.exon4;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12609068 | 12609133 | 12609068 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12608753 | 12608850 | 12608753 | ID=MS.gene64513.t1.exon5;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12608753 | 12608850 | 12608753 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12608581 | 12608643 | 12608581 | ID=MS.gene64513.t1.exon6;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12608581 | 12608643 | 12608581 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12608400 | 12608492 | 12608400 | ID=MS.gene64513.t1.exon7;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12608400 | 12608492 | 12608400 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
chr7.3 | exon | 12608101 | 12608184 | 12608101 | ID=MS.gene64513.t1.exon8;Parent=MS.gene64513.t1 |
chr7.3 | CDS | 12608101 | 12608184 | 12608101 | ID=cds.MS.gene64513.t1;Parent=MS.gene64513.t1 |
Gene Sequence |
Protein sequence |