AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71994


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71994.t1 MTR_7g081700 86.935 199 26 0 69 267 4 202 7.70e-131 369
MS.gene71994.t1 MTR_8g006970 82.938 211 35 1 58 267 7 217 6.92e-129 364
MS.gene71994.t1 MTR_4g099470 100.000 173 0 0 95 267 6 178 1.85e-127 359
MS.gene71994.t1 MTR_2g005500 76.768 198 45 1 69 265 5 202 3.71e-113 324
MS.gene71994.t1 MTR_8g006970 87.574 169 21 0 69 237 4 172 1.48e-107 309
MS.gene71994.t1 MTR_1g068740 58.738 206 74 4 71 267 13 216 1.71e-82 247
MS.gene71994.t1 MTR_1g115325 58.621 203 75 3 71 265 13 214 2.26e-82 246
MS.gene71994.t1 MTR_1g068730 58.252 206 75 4 71 267 13 216 6.60e-82 245
MS.gene71994.t1 MTR_7g100020 59.223 206 73 4 71 267 13 216 6.67e-82 245
MS.gene71994.t1 MTR_4g063160 57.561 205 75 5 71 265 13 215 4.43e-78 235
MS.gene71994.t1 MTR_2g005500 57.576 198 43 2 69 265 5 162 8.71e-74 223
MS.gene71994.t1 MTR_2g096550 52.217 203 86 4 71 265 13 212 1.68e-69 213
MS.gene71994.t1 MTR_1g068740 65.306 147 50 1 71 217 13 158 1.24e-65 203
MS.gene71994.t1 MTR_1g068730 66.667 141 46 1 71 211 13 152 1.08e-64 200
MS.gene71994.t1 MTR_4g064897 46.602 206 101 2 71 267 10 215 1.31e-62 196
MS.gene71994.t1 MTR_2g005510 46.667 210 101 3 69 267 11 220 2.14e-60 191
MS.gene71994.t1 MTR_6g021790 54.268 164 75 0 71 234 4 167 2.08e-59 187
MS.gene71994.t1 MTR_2g027660 45.411 207 101 1 72 266 5 211 3.61e-59 187
MS.gene71994.t1 MTR_8g031660 51.462 171 83 0 68 238 1 171 1.41e-58 186
MS.gene71994.t1 MTR_2g075950 46.860 207 100 2 71 267 11 217 2.97e-58 185
MS.gene71994.t1 MTR_1g078200 46.698 212 97 3 71 266 12 223 8.66e-58 184
MS.gene71994.t1 MTR_3g069510 45.283 212 100 3 69 267 8 216 1.60e-57 183
MS.gene71994.t1 MTR_7g051940 47.059 204 99 1 72 266 12 215 1.99e-57 183
MS.gene71994.t1 MTR_8g089985 53.293 167 76 2 71 236 15 180 2.88e-57 182
MS.gene71994.t1 MTR_8g031870 50.000 168 84 0 68 235 1 168 3.15e-57 181
MS.gene71994.t1 MTR_3g086980 44.231 208 103 2 71 265 14 221 3.48e-57 182
MS.gene71994.t1 MTR_4g088090 45.411 207 103 1 71 267 11 217 8.65e-57 181
MS.gene71994.t1 MTR_2g014990 45.411 207 103 1 71 267 11 217 1.05e-56 181
MS.gene71994.t1 MTR_8g093740 48.241 199 98 4 71 265 11 208 1.31e-56 181
MS.gene71994.t1 MTR_7g103070 47.525 202 101 3 70 266 13 214 1.63e-56 181
MS.gene71994.t1 MTR_4g079350 44.928 207 104 1 71 267 11 217 7.31e-56 179
MS.gene71994.t1 MTR_2g090865 45.192 208 105 1 69 267 7 214 5.94e-55 176
MS.gene71994.t1 MTR_2g083860 45.498 211 102 3 69 267 9 218 1.48e-54 176
MS.gene71994.t1 MTR_8g027220 42.056 214 122 2 52 263 3 216 2.38e-54 176
MS.gene71994.t1 MTR_1g029450 48.756 201 97 4 71 266 15 214 5.29e-54 174
MS.gene71994.t1 MTR_8g031680 47.904 167 87 0 68 234 1 167 4.66e-53 171
MS.gene71994.t1 MTR_6g079550 45.933 209 101 4 69 266 8 215 4.70e-53 172
MS.gene71994.t1 MTR_3g096350 46.231 199 102 4 71 265 10 207 5.70e-53 171
MS.gene71994.t1 MTR_8g036220 47.368 171 90 0 71 241 14 184 5.71e-53 172
MS.gene71994.t1 MTR_0262s0050 48.571 175 90 0 71 245 13 187 6.48e-53 171
MS.gene71994.t1 MTR_1g062760 47.000 200 100 5 71 265 12 210 8.91e-53 171
MS.gene71994.t1 MTR_1g052475 49.390 164 83 0 71 234 13 176 8.29e-52 169
MS.gene71994.t1 MTR_8g031830 46.111 180 93 1 68 243 1 180 3.52e-51 166
MS.gene71994.t1 MTR_3g064390 44.103 195 100 4 75 266 12 200 8.59e-51 165
MS.gene71994.t1 MTR_7g405790 47.126 174 92 0 72 245 14 187 1.00e-50 166
MS.gene71994.t1 MTR_1g090717 47.500 200 101 4 71 266 13 212 3.30e-50 164
MS.gene71994.t1 MTR_8g107070 55.758 165 71 2 71 234 12 175 1.17e-49 164
MS.gene71994.t1 MTR_5g076590 42.268 194 105 3 75 266 12 200 4.65e-49 161
MS.gene71994.t1 MTR_8g103550 41.237 194 106 3 75 266 11 198 1.85e-46 154
MS.gene71994.t1 MTR_3g096350 54.286 140 58 4 71 208 10 145 9.78e-45 148
MS.gene71994.t1 MTR_3g096350 60.331 121 45 3 71 189 10 129 2.44e-43 145
MS.gene71994.t1 MTR_7g117910 49.630 135 67 1 66 199 12 146 7.42e-43 145
MS.gene71994.t1 MTR_1g094220 42.236 161 92 1 75 234 33 193 2.31e-42 144
MS.gene71994.t1 MTR_8g093740 44.118 170 91 3 100 265 6 175 3.11e-42 142
MS.gene71994.t1 MTR_2g102060 38.974 195 111 3 75 267 12 200 3.24e-42 143
MS.gene71994.t1 MTR_1g094220 43.506 154 86 1 75 227 33 186 8.38e-42 142
MS.gene71994.t1 MTR_1g094220 43.506 154 86 1 75 227 33 186 1.25e-41 142
MS.gene71994.t1 MTR_8g090215 37.056 197 120 1 74 266 10 206 1.64e-41 142
MS.gene71994.t1 MTR_5g013900 36.735 196 119 1 74 264 10 205 3.06e-41 141
MS.gene71994.t1 MTR_1g094220 43.506 154 86 1 75 227 33 186 3.70e-41 142
MS.gene71994.t1 MTR_4g098950 39.752 161 97 0 74 234 10 170 2.21e-40 139
MS.gene71994.t1 MTR_3g087160 41.615 161 94 0 74 234 10 170 2.69e-40 139
MS.gene71994.t1 MTR_2g101890 38.049 205 116 5 69 265 6 207 4.36e-39 135
MS.gene71994.t1 MTR_4g012940 38.049 205 116 5 69 265 4 205 1.65e-38 134
MS.gene71994.t1 MTR_4g069850 40.116 172 96 3 69 233 4 175 2.74e-37 131
MS.gene71994.t1 MTR_7g103070 45.098 153 79 3 119 266 6 158 3.11e-37 129
MS.gene71994.t1 MTR_3g064390 45.669 127 69 0 75 201 12 138 1.18e-35 125
MS.gene71994.t1 MTR_1g097420 37.427 171 100 3 68 231 3 173 8.67e-34 122
MS.gene71994.t1 MTR_8g092020 36.747 166 98 2 73 231 12 177 4.79e-32 117
MS.gene71994.t1 MTR_6g039490 34.783 207 115 6 70 264 5 203 3.82e-29 110
MS.gene71994.t1 MTR_1g097420 34.682 173 104 4 66 231 30 200 1.91e-28 108
MS.gene71994.t1 MTR_4g015220 55.696 79 35 0 187 265 2 80 1.98e-25 96.3
MS.gene71994.t1 MTR_3g107707 30.108 186 117 4 74 253 14 192 7.54e-23 93.6
MS.gene71994.t1 MTR_3g107713 30.108 186 117 4 74 253 14 192 8.03e-23 93.6
MS.gene71994.t1 MTR_3g107717 30.108 186 117 4 74 253 14 192 8.37e-23 93.6
MS.gene71994.t1 MTR_4g073250 32.022 178 101 6 62 227 1 170 2.70e-22 91.7
MS.gene71994.t1 MTR_4g088055 31.361 169 102 5 73 229 6 172 2.83e-22 91.7
MS.gene71994.t1 MTR_6g087980 31.737 167 100 5 73 227 6 170 3.99e-22 91.7
MS.gene71994.t1 MTR_8g075240 31.953 169 101 5 73 229 6 172 1.05e-21 90.1
MS.gene71994.t1 MTR_5g022600 31.361 169 102 5 73 229 6 172 5.39e-21 88.2
MS.gene71994.t1 MTR_3g078260 30.055 183 109 6 73 243 8 183 2.05e-20 87.0
MS.gene71994.t1 MTR_2g090875 29.586 169 105 5 73 229 6 172 3.98e-20 85.9
MS.gene71994.t1 MTR_1g059590 35.928 167 100 3 76 242 398 557 8.26e-20 89.0
MS.gene71994.t1 MTR_1g059590 35.928 167 100 3 76 242 431 590 1.04e-19 88.6
MS.gene71994.t1 MTR_8g031810 39.048 105 50 1 72 176 5 95 1.49e-19 81.3
MS.gene71994.t1 MTR_4g113620 30.000 170 97 5 74 238 14 166 5.30e-19 83.2
MS.gene71994.t1 MTR_3g078260 33.621 116 74 3 73 187 8 121 6.19e-17 75.9
MS.gene71994.t1 MTR_1452s0010 44.928 69 38 0 102 170 10 78 1.32e-15 71.2
MS.gene71994.t1 MTR_5g078090 34.783 138 80 4 74 210 20 148 1.80e-14 70.1
MS.gene71994.t1 MTR_1g006630 84.848 33 5 0 17 49 1 33 1.75e-13 64.7
MS.gene71994.t1 MTR_1686s0010 40.000 70 42 0 102 171 10 79 7.47e-13 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71994.t1 AT5G47200 88.945 199 22 0 69 267 4 202 2.12e-133 375
MS.gene71994.t1 AT4G17530 88.442 199 23 0 69 267 4 202 2.29e-132 372
MS.gene71994.t1 AT1G02130 86.000 200 27 1 69 267 4 203 2.02e-128 362
MS.gene71994.t1 AT3G11730 75.000 200 47 3 69 265 4 203 1.07e-109 315
MS.gene71994.t1 AT5G59840 59.709 206 72 4 71 267 13 216 1.67e-83 249
MS.gene71994.t1 AT3G46060 58.738 206 74 4 71 267 13 216 2.98e-82 246
MS.gene71994.t1 AT3G46060 58.738 206 74 4 71 267 13 216 2.98e-82 246
MS.gene71994.t1 AT3G46060 58.738 206 74 4 71 267 13 216 2.98e-82 246
MS.gene71994.t1 AT3G53610 57.561 205 78 3 71 267 13 216 2.67e-81 244
MS.gene71994.t1 AT3G53610 57.561 205 78 3 71 267 13 216 2.67e-81 244
MS.gene71994.t1 AT3G53610 57.561 205 78 3 71 267 13 216 2.67e-81 244
MS.gene71994.t1 AT3G09900 58.537 205 75 3 71 266 13 216 4.91e-79 238
MS.gene71994.t1 AT5G03520 59.113 203 75 3 71 266 13 214 2.39e-78 236
MS.gene71994.t1 AT4G17160 48.756 201 95 2 72 265 5 204 3.98e-63 197
MS.gene71994.t1 AT5G47520 49.048 210 94 2 71 267 12 221 2.71e-62 196
MS.gene71994.t1 AT1G07410 45.854 205 103 2 71 267 10 214 7.91e-61 191
MS.gene71994.t1 AT4G35860 54.268 164 75 0 71 234 4 167 8.03e-61 191
MS.gene71994.t1 AT4G17170 46.602 206 98 2 72 265 5 210 5.08e-60 189
MS.gene71994.t1 AT1G09630 47.115 208 98 3 71 267 10 216 1.75e-59 188
MS.gene71994.t1 AT5G03520 54.819 166 67 3 108 266 40 204 3.27e-59 187
MS.gene71994.t1 AT5G45750 47.115 208 101 2 69 267 9 216 6.90e-59 187
MS.gene71994.t1 AT4G39990 46.190 210 99 4 71 267 15 223 1.03e-58 186
MS.gene71994.t1 AT3G07410 48.309 207 96 3 71 266 10 216 1.24e-58 186
MS.gene71994.t1 AT3G15060 48.558 208 95 3 71 267 11 217 2.50e-58 185
MS.gene71994.t1 AT1G28550 47.368 209 97 3 71 267 11 218 6.63e-58 184
MS.gene71994.t1 AT5G65270 46.009 213 98 5 71 267 15 226 9.75e-58 184
MS.gene71994.t1 AT1G16920 47.573 206 99 2 71 267 11 216 1.16e-57 183
MS.gene71994.t1 AT4G18430 46.117 206 101 1 71 266 11 216 1.17e-57 184
MS.gene71994.t1 AT3G46830 44.231 208 105 1 71 267 10 217 2.41e-57 182
MS.gene71994.t1 AT3G46830 44.231 208 105 1 71 267 10 217 2.41e-57 182
MS.gene71994.t1 AT5G60860 45.455 209 104 1 69 267 9 217 3.57e-57 182
MS.gene71994.t1 AT2G33870 46.890 209 98 3 71 267 11 218 3.80e-57 182
MS.gene71994.t1 AT5G59150 43.269 208 107 1 71 267 10 217 3.80e-57 182
MS.gene71994.t1 AT5G47960 44.762 210 103 3 71 267 13 222 6.40e-57 182
MS.gene71994.t1 AT1G06400 44.444 216 110 3 62 267 1 216 7.63e-57 181
MS.gene71994.t1 AT4G18800 46.078 204 103 2 71 267 11 214 3.34e-56 180
MS.gene71994.t1 AT1G05810 43.810 210 107 2 69 267 8 217 1.39e-54 176
MS.gene71994.t1 AT1G05810 43.810 210 107 2 69 267 54 263 3.05e-54 176
MS.gene71994.t1 AT2G43130 44.608 204 105 2 71 266 10 213 4.77e-54 174
MS.gene71994.t1 AT1G18200 48.500 200 91 3 71 259 11 209 5.79e-53 172
MS.gene71994.t1 AT3G12160 50.000 164 82 0 71 234 13 176 9.19e-53 171
MS.gene71994.t1 AT5G03530 48.259 201 98 4 71 266 11 210 1.46e-52 170
MS.gene71994.t1 AT5G03530 48.259 201 98 4 71 266 11 210 1.46e-52 170
MS.gene71994.t1 AT2G31680 43.062 209 107 2 71 267 10 218 3.46e-52 169
MS.gene71994.t1 AT1G73640 48.421 190 93 2 71 256 11 199 5.02e-52 169
MS.gene71994.t1 AT1G43890 54.217 166 73 3 71 234 11 175 1.02e-51 168
MS.gene71994.t1 AT1G43890 54.217 166 73 3 71 234 11 175 1.02e-51 168
MS.gene71994.t1 AT1G43890 54.217 166 73 3 71 234 11 175 1.02e-51 168
MS.gene71994.t1 AT1G01200 41.743 218 123 3 50 263 4 221 1.03e-49 164
MS.gene71994.t1 AT4G19640 41.969 193 107 2 75 266 12 200 3.63e-47 156
MS.gene71994.t1 AT5G45130 41.538 195 105 4 75 266 12 200 3.59e-45 151
MS.gene71994.t1 AT5G45130 40.933 193 105 4 77 266 22 208 1.40e-43 147
MS.gene71994.t1 AT3G54840 43.353 173 92 3 75 246 35 202 1.49e-43 147
MS.gene71994.t1 AT3G54840 43.023 172 92 3 76 246 2 168 2.26e-43 145
MS.gene71994.t1 AT2G44610 37.879 198 118 1 74 266 10 207 3.20e-43 146
MS.gene71994.t1 AT3G54840 44.805 154 84 1 75 227 35 188 7.46e-43 145
MS.gene71994.t1 AT3G09910 45.109 184 97 4 71 252 11 192 5.79e-42 142
MS.gene71994.t1 AT3G09910 45.109 184 97 4 71 252 11 192 5.79e-42 142
MS.gene71994.t1 AT3G09910 44.221 199 105 4 71 267 11 205 1.20e-41 142
MS.gene71994.t1 AT3G09910 44.221 199 105 4 71 267 11 205 1.20e-41 142
MS.gene71994.t1 AT3G09910 44.221 199 105 4 71 267 11 205 1.20e-41 142
MS.gene71994.t1 AT4G35860 53.333 120 56 0 115 234 2 121 1.55e-41 140
MS.gene71994.t1 AT2G22290 38.191 199 115 3 74 266 10 206 8.42e-41 140
MS.gene71994.t1 AT1G52280 39.216 204 113 5 69 264 4 204 5.47e-40 138
MS.gene71994.t1 AT5G10260 40.994 161 95 0 74 234 10 170 6.40e-40 137
MS.gene71994.t1 AT3G18820 42.442 172 92 3 69 233 4 175 1.88e-39 136
MS.gene71994.t1 AT4G39890 41.975 162 93 1 74 234 10 171 2.04e-39 137
MS.gene71994.t1 AT5G59150 39.634 164 88 1 115 267 3 166 3.59e-39 134
MS.gene71994.t1 AT3G16100 38.235 204 115 5 69 264 4 204 8.62e-39 135
MS.gene71994.t1 AT5G64990 39.759 166 100 0 74 239 8 173 3.51e-37 130
MS.gene71994.t1 AT1G49300 36.765 204 118 5 69 264 4 204 1.73e-36 129
MS.gene71994.t1 AT1G49300 36.765 204 118 5 69 264 4 204 1.73e-36 129
MS.gene71994.t1 AT4G19640 45.802 131 71 0 75 205 12 142 2.79e-36 128
MS.gene71994.t1 AT2G21880 39.157 166 94 3 73 231 9 174 1.63e-35 126
MS.gene71994.t1 AT4G19640 46.400 125 67 0 75 199 12 136 2.02e-35 124
MS.gene71994.t1 AT1G22740 35.577 208 112 5 69 264 4 201 8.06e-35 124
MS.gene71994.t1 AT5G64990 38.150 173 100 1 74 239 8 180 1.91e-34 124
MS.gene71994.t1 AT4G09720 39.412 170 96 3 69 231 4 173 2.12e-33 120
MS.gene71994.t1 AT4G09720 37.143 175 98 3 69 231 4 178 2.77e-31 115
MS.gene71994.t1 AT5G39620 38.788 165 94 3 74 231 6 170 1.18e-30 114
MS.gene71994.t1 AT4G09720 35.912 181 98 3 69 231 4 184 2.92e-30 113
MS.gene71994.t1 AT2G21880 40.146 137 75 3 102 231 13 149 1.01e-27 105
MS.gene71994.t1 AT2G21880 40.146 137 75 3 102 231 13 149 1.01e-27 105
MS.gene71994.t1 AT2G21880 34.337 166 94 4 73 231 9 166 9.54e-26 100
MS.gene71994.t1 AT4G09720 40.876 137 74 3 102 231 3 139 1.75e-25 99.4
MS.gene71994.t1 AT4G09720 40.876 137 74 3 102 231 3 139 1.75e-25 99.4
MS.gene71994.t1 AT4G09720 40.876 137 74 3 102 231 3 139 1.75e-25 99.4
MS.gene71994.t1 AT2G44690 34.132 167 96 5 73 227 18 182 2.11e-24 97.4
MS.gene71994.t1 AT4G35020 33.728 169 98 5 73 229 6 172 5.86e-24 96.3
MS.gene71994.t1 AT4G35020 33.728 169 98 5 73 229 6 172 5.86e-24 96.3
MS.gene71994.t1 AT4G35020 33.728 169 98 5 73 229 6 172 5.86e-24 96.3
MS.gene71994.t1 AT4G28950 33.333 165 98 5 73 227 6 168 1.34e-23 95.5
MS.gene71994.t1 AT3G51300 32.934 167 98 5 75 229 8 172 4.79e-23 93.6
MS.gene71994.t1 AT5G55080 30.864 162 107 4 74 234 14 171 7.20e-23 94.0
MS.gene71994.t1 AT5G55190 30.435 184 119 4 74 253 14 192 7.82e-23 93.6
MS.gene71994.t1 AT5G20020 28.796 191 129 3 74 260 14 201 8.15e-23 93.6
MS.gene71994.t1 AT1G75840 32.544 169 100 5 73 229 6 172 1.07e-22 92.8
MS.gene71994.t1 AT5G20010 28.796 191 129 3 74 260 14 201 1.44e-22 93.2
MS.gene71994.t1 AT2G17800 32.544 169 100 5 73 229 6 172 2.32e-22 92.0
MS.gene71994.t1 AT2G17800 32.544 169 100 5 73 229 6 172 2.32e-22 92.0
MS.gene71994.t1 AT4G35950 32.544 169 100 5 73 229 6 172 3.37e-22 91.3
MS.gene71994.t1 AT5G45970 30.539 167 102 5 73 227 6 170 1.47e-21 89.7
MS.gene71994.t1 AT5G46025 40.187 107 63 1 135 240 6 112 4.61e-21 85.9
MS.gene71994.t1 AT1G20090 31.361 169 102 5 73 229 5 171 4.72e-21 88.2
MS.gene71994.t1 AT3G48040 30.178 169 104 5 73 229 8 174 7.63e-20 85.5
MS.gene71994.t1 AT5G62880 30.460 174 107 6 73 234 8 179 4.37e-19 83.6
MS.gene71994.t1 AT3G48040 33.333 123 79 3 73 194 8 128 1.72e-18 81.3
MS.gene71994.t1 AT5G62880 34.146 123 78 3 73 194 8 128 2.53e-18 80.9
MS.gene71994.t1 AT4G35020 35.965 114 70 3 75 187 8 119 4.96e-18 79.0
MS.gene71994.t1 AT4G35020 35.965 114 70 3 75 187 8 119 4.96e-18 79.0
MS.gene71994.t1 AT3G51290 32.394 142 82 5 100 229 634 773 9.76e-14 71.2
MS.gene71994.t1 AT3G49870 30.460 174 101 6 74 237 1 164 1.14e-13 67.8
MS.gene71994.t1 AT5G37680 34.058 138 81 4 74 210 20 148 1.34e-13 67.8
MS.gene71994.t1 AT5G67560 32.934 167 98 6 70 227 12 173 1.54e-13 67.8
MS.gene71994.t1 AT3G49870 31.868 182 100 8 70 237 12 183 2.08e-13 67.4
MS.gene71994.t1 AT3G22950 30.894 123 73 4 74 192 18 132 5.52e-11 60.5
MS.gene71994.t1 AT3G22950 30.894 123 73 4 74 192 18 132 5.52e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTGGTTGTCCTCGAATT+TGG 0.168291 8.1:+22843069 None:intergenic
ACTTACAATTTGAAGTTTAA+TGG 0.206147 8.1:+22844259 None:intergenic
CCTCGAATTTGGACTGTTGC+AGG 0.237144 8.1:+22843080 None:intergenic
CAGGCATTTGCAGATGAAAT+TGG 0.240708 8.1:-22843360 MS.gene71994:CDS
CTGCTGGTCAAGAACGTTTC+CGG 0.274066 8.1:-22843787 MS.gene71994:CDS
CCCTTGTCCCTCTCTCTTGC+CGG 0.285935 8.1:+22846142 None:intergenic
TGAAATTGGAATTCCTTTCA+TGG 0.332549 8.1:-22843346 MS.gene71994:CDS
GGTTGTTTCCGGCGAGTTGC+CGG 0.340008 8.1:-22846212 MS.gene71994:CDS
GCGGCCGCTTTGACCCGCTT+TGG 0.376295 8.1:+22846259 None:intergenic
AGAGGGACAAGGGGAGAAGG+AGG 0.382330 8.1:-22846132 MS.gene71994:CDS
CAATGTGGAACAAGCTTTCA+TGG 0.386569 8.1:-22843301 MS.gene71994:CDS
TAACATTGTTAAAGCTCTCT+TGG 0.389666 8.1:+22843608 None:intergenic
ACGAGCAGCAACCAGCCTTC+TGG 0.395079 8.1:+22843045 None:intergenic
GCAGGCCTGGCACTGTTGGC+AGG 0.403801 8.1:+22843098 None:intergenic
AATTTGGACTGTTGCAGGCC+TGG 0.409513 8.1:+22843085 None:intergenic
GGAGGAAGATGAAAGAGATA+TGG 0.414668 8.1:-22846114 MS.gene71994:CDS
AATGTTAACAAGCTTCTAGT+TGG 0.417837 8.1:-22843547 MS.gene71994:CDS
GAGAGAGGGACAAGGGGAGA+AGG 0.425171 8.1:-22846135 MS.gene71994:CDS
CGGCCGCGAAATGGTGGAGC+GGG 0.428777 8.1:-22846288 None:intergenic
TGTTGCAGGCCTGGCACTGT+TGG 0.432139 8.1:+22843094 None:intergenic
CCGGCGAGTTGCCGGAGAAA+TGG 0.435706 8.1:-22846204 MS.gene71994:CDS
CAACCAGCCTTCTGGTTCAC+TGG 0.436527 8.1:+22843053 None:intergenic
GGAAGATGAAAGAGATATGG+TGG 0.444805 8.1:-22846111 MS.gene71994:CDS
GAAAATCCGCACTGTTGAGC+AGG 0.471772 8.1:-22844291 MS.gene71994:CDS
GTCAACCTGCCAACAGTGCC+AGG 0.473985 8.1:-22843103 MS.gene71994:CDS
AGCTACTATCGTGGGGCTCA+TGG 0.480037 8.1:-22843752 MS.gene71994:CDS
GAAAGCTTGTTCCACATTGG+AGG 0.502915 8.1:+22843305 None:intergenic
TTGATTGGAGATTCTGGTGT+GGG 0.506444 8.1:-22844947 MS.gene71994:CDS
GAGCGGGGCGGATCCAAAGC+GGG 0.512308 8.1:-22846272 MS.gene71994:CDS
ATTGTATAGTGGGACACTGC+TGG 0.512939 8.1:-22843803 MS.gene71994:intron
TCCGCACTGTTGAGCAGGAT+GGG 0.520866 8.1:-22844286 MS.gene71994:CDS
TTAGCACTAGTTTCCATGAA+AGG 0.524383 8.1:+22843333 None:intergenic
ATCCGCACTGTTGAGCAGGA+TGG 0.528930 8.1:-22844287 MS.gene71994:CDS
AATCACCTTTGCTGTTTCAG+AGG 0.533991 8.1:+22843489 None:intergenic
AGTAGCTGCTAGTTATAGTC+CGG 0.542099 8.1:+22843768 None:intergenic
CCGGAGAAATGGACACAAAA+CGG 0.542648 8.1:-22846193 MS.gene71994:CDS
CCATTTCTCCGGCAACTCGC+CGG 0.543189 8.1:+22846204 None:intergenic
TAACTAGCAGCTACTATCGT+GGG 0.548282 8.1:-22843760 MS.gene71994:CDS
GACAGCTATATCAGTACCAT+CGG 0.567693 8.1:-22844414 MS.gene71994:CDS
CAGAACTTACAGCAAACCTC+AGG 0.568006 8.1:+22844909 None:intergenic
TGGAAACAAGAGCGATCTCT+CGG 0.568213 8.1:-22843527 MS.gene71994:CDS
GGCCGCGAAATGGTGGAGCG+GGG 0.572270 8.1:-22846287 None:intergenic
GCAAGTCATGTCTCCTCCTG+AGG 0.576917 8.1:-22844925 MS.gene71994:CDS
TGGTACTGATATAGCTGTCA+AGG 0.577148 8.1:+22844418 None:intergenic
GTTGTTTCCGGCAAGAGAGA+GGG 0.578185 8.1:-22846149 MS.gene71994:CDS
AACACGAAAACATGAGAAAG+CGG 0.583477 8.1:+22846240 None:intergenic
CCTGCAACAGTCCAAATTCG+AGG 0.584589 8.1:-22843080 MS.gene71994:CDS
CGCGAAATGGTGGAGCGGGG+CGG 0.588452 8.1:-22846284 None:intergenic
GAAGATGAAAGAGATATGGT+GGG 0.588641 8.1:-22846110 MS.gene71994:CDS
CGGCAAGAGAGAGGGACAAG+GGG 0.589537 8.1:-22846141 MS.gene71994:CDS
CCGGCAAGAGAGAGGGACAA+GGG 0.591314 8.1:-22846142 MS.gene71994:CDS
GGAGCGGGGCGGATCCAAAG+CGG 0.592718 8.1:-22846273 MS.gene71994:CDS
CATGAAAGCTTGTTCCACAT+TGG 0.594293 8.1:+22843302 None:intergenic
CAACCAGTGAACCAGAAGGC+TGG 0.595916 8.1:-22843056 MS.gene71994:CDS
TGTTGTTTCCGGCAAGAGAG+AGG 0.599717 8.1:-22846150 MS.gene71994:CDS
TGGGATTAAGATTGATCCAA+CGG 0.600430 8.1:-22846091 MS.gene71994:intron
GGAACAAGCTTTCATGGCCA+TGG 0.601950 8.1:-22843295 MS.gene71994:CDS
GTTGATTGGAGATTCTGGTG+TGG 0.609925 8.1:-22844948 MS.gene71994:CDS
TCCGGCAAGAGAGAGGGACA+AGG 0.612544 8.1:-22846143 MS.gene71994:CDS
AACTTACAGCAAACCTCAGG+AGG 0.618028 8.1:+22844912 None:intergenic
ATAACTAGCAGCTACTATCG+TGG 0.626182 8.1:-22843761 MS.gene71994:CDS
GCTTACAAAGTCCACTCCGA+TGG 0.633467 8.1:+22844398 None:intergenic
GCTTTAACAATGTTAAGCAG+TGG 0.636327 8.1:-22843600 MS.gene71994:CDS
TGTGTCCTCTGAAACAGCAA+AGG 0.645238 8.1:-22843494 MS.gene71994:intron
TCCCATCCTGCTCAACAGTG+CGG 0.647894 8.1:+22844285 None:intergenic
GCGGCCGCGAAATGGTGGAG+CGG 0.665487 8.1:-22846289 None:intergenic
AACTAGCAGCTACTATCGTG+GGG 0.674225 8.1:-22843759 MS.gene71994:CDS
CTATATCAGTACCATCGGAG+TGG 0.681244 8.1:-22844409 MS.gene71994:CDS
AGGACAACCAGTGAACCAGA+AGG 0.685270 8.1:-22843060 MS.gene71994:CDS
GGATCCAAAGCGGGTCAAAG+CGG 0.717041 8.1:-22846263 MS.gene71994:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTAATAGTAAAAAAT+GGG + chr8.1:22844510-22844529 None:intergenic 10.0%
!! TTGTTTAAGTATATTATTTA+AGG - chr8.1:22844048-22844067 MS.gene71994:intron 10.0%
!! ACATCAAAATATTAGATTAA+AGG + chr8.1:22845921-22845940 None:intergenic 15.0%
!! ATAATATCATATCTTTGATT+GGG - chr8.1:22844306-22844325 MS.gene71994:intron 15.0%
!! GAAAATGTAATAGTAAAAAA+TGG + chr8.1:22844511-22844530 None:intergenic 15.0%
!! TTTCTTAAATACATTGTTTA+AGG - chr8.1:22843993-22844012 MS.gene71994:intron 15.0%
!!! CTTTTTAATTTTTTTTTTGC+AGG - chr8.1:22845668-22845687 MS.gene71994:intron 15.0%
!!! TACTAAATTTTTTAGCATTA+TGG - chr8.1:22844021-22844040 MS.gene71994:intron 15.0%
!!! TAGGAATAATAGTTTTTTAA+AGG - chr8.1:22843844-22843863 MS.gene71994:intron 15.0%
!! AACATGGAAATAAGTTTAAA+TGG + chr8.1:22844958-22844977 None:intergenic 20.0%
!! ACTACCATATATTAATATAG+AGG - chr8.1:22843291-22843310 MS.gene71994:CDS 20.0%
!! ACTTCATAAAATATCATTCA+AGG + chr8.1:22844827-22844846 None:intergenic 20.0%
!! AGTTGAATATAAAGAACATA+TGG - chr8.1:22844537-22844556 MS.gene71994:intron 20.0%
!! ATAAGTTTAAATGGTAGATA+TGG + chr8.1:22844949-22844968 None:intergenic 20.0%
!! CAAAATATTAGATTAAAGGA+AGG + chr8.1:22845917-22845936 None:intergenic 20.0%
!! CATTCCTCTATATTAATATA+TGG + chr8.1:22843298-22843317 None:intergenic 20.0%
!! CTATATTAATATATGGTAGT+GGG + chr8.1:22843291-22843310 None:intergenic 20.0%
!! GATAATATCATATCTTTGAT+TGG - chr8.1:22844305-22844324 MS.gene71994:intron 20.0%
!! TAATATCATATCTTTGATTG+GGG - chr8.1:22844307-22844326 MS.gene71994:intron 20.0%
!! TATCATTCCTGATTAATATA+TGG - chr8.1:22843482-22843501 MS.gene71994:intron 20.0%
!! TCTATATTAATATATGGTAG+TGG + chr8.1:22843292-22843311 None:intergenic 20.0%
!! TTATATGTCCATTTGATAAA+TGG - chr8.1:22845306-22845325 MS.gene71994:intron 20.0%
!! TTCTGCTTCATAAAAAAAAT+AGG - chr8.1:22843825-22843844 MS.gene71994:intron 20.0%
!! TTGATTTCCTAATATTCAAT+GGG + chr8.1:22845407-22845426 None:intergenic 20.0%
!! TTTAGATGTAGAAAACAAAT+TGG + chr8.1:22845172-22845191 None:intergenic 20.0%
!!! ACTTACAATTTGAAGTTTAA+TGG + chr8.1:22845062-22845081 None:intergenic 20.0%
!!! ATTGATTTCCTAATATTCAA+TGG + chr8.1:22845408-22845427 None:intergenic 20.0%
!!! CAATTTTCAACAACTTTTTA+GGG + chr8.1:22843452-22843471 None:intergenic 20.0%
!!! GCATTTTTTTATTGTATAGT+GGG - chr8.1:22845505-22845524 MS.gene71994:intron 20.0%
!!! TGCATTTTTTTATTGTATAG+TGG - chr8.1:22845504-22845523 MS.gene71994:intron 20.0%
!!! TTGAATGATATTTTATGAAG+TGG - chr8.1:22844826-22844845 MS.gene71994:intron 20.0%
!!! TTTTTTTCCTTCTTTAGTTA+TGG - chr8.1:22844445-22844464 MS.gene71994:intron 20.0%
! AAAGTTACCCATTGAATATT+AGG - chr8.1:22845397-22845416 MS.gene71994:intron 25.0%
! AATAAGAATGCAAAAGAATG+TGG + chr8.1:22843560-22843579 None:intergenic 25.0%
! AATACTGAACAAGTTGTTAT+TGG - chr8.1:22845106-22845125 MS.gene71994:intron 25.0%
! ATAACAATAGAGAGAGAAAA+AGG + chr8.1:22843399-22843418 None:intergenic 25.0%
! ATAGTCACTGAAAATAAGAT+AGG + chr8.1:22844336-22844355 None:intergenic 25.0%
! ATTCTCACCATATATTAATC+AGG + chr8.1:22843492-22843511 None:intergenic 25.0%
! CATTTGAACAGTATTATTTG+AGG - chr8.1:22845370-22845389 MS.gene71994:intron 25.0%
! CCTAAAAAGTTGTTGAAAAT+TGG - chr8.1:22843450-22843469 MS.gene71994:intron 25.0%
! GAAGGAAAAAAAAAAAACAG+AGG + chr8.1:22844437-22844456 None:intergenic 25.0%
! GACTTAAAAAAAAATGTCAC+TGG + chr8.1:22845895-22845914 None:intergenic 25.0%
! GTAAATGAGGTTAATAATCA+AGG + chr8.1:22846163-22846182 None:intergenic 25.0%
! TACTAAAGTTGAAAACAACA+TGG + chr8.1:22844974-22844993 None:intergenic 25.0%
! TATGGAATTTCTGTATGTAA+AGG - chr8.1:22846066-22846085 MS.gene71994:intron 25.0%
! TATTATCATAGTTGTCAAAG+CGG + chr8.1:22844292-22844311 None:intergenic 25.0%
! TCACAAAAGTTGTTGAAAAT+TGG + chr8.1:22843333-22843352 None:intergenic 25.0%
! TTATTGTCCAATAAGAATTG+AGG - chr8.1:22843415-22843434 MS.gene71994:intron 25.0%
!! AATGATATTTTATGAAGTGG+AGG - chr8.1:22844829-22844848 MS.gene71994:intron 25.0%
!! AATTGTGAGTCTTTTTAAAC+CGG - chr8.1:22845592-22845611 MS.gene71994:intron 25.0%
!! AATTTCCTTTTCAAACACTT+CGG - chr8.1:22845425-22845444 MS.gene71994:intron 25.0%
!! ATTTCCTTTTTACATTGTCT+TGG - chr8.1:22845628-22845647 MS.gene71994:intron 25.0%
!! CCAATTTTCAACAACTTTTT+AGG + chr8.1:22843453-22843472 None:intergenic 25.0%
!! TTTCCTTTTTACATTGTCTT+GGG - chr8.1:22845629-22845648 MS.gene71994:intron 25.0%
!! TTTTTCTTTTTCTGTGAAAC+AGG - chr8.1:22844867-22844886 MS.gene71994:intron 25.0%
AAAAAAAATGTCACTGGAAG+TGG + chr8.1:22845889-22845908 None:intergenic 30.0%
AAAAAAATGTCACTGGAAGT+GGG + chr8.1:22845888-22845907 None:intergenic 30.0%
AAAAAGGAAATTGCTGACAA+AGG + chr8.1:22845619-22845638 None:intergenic 30.0%
AAAAGGAAATTGCTGACAAA+GGG + chr8.1:22845618-22845637 None:intergenic 30.0%
AAATGATCCAAGAACACAAT+TGG + chr8.1:22845355-22845374 None:intergenic 30.0%
AAGATGACCATAACTAAAGA+AGG + chr8.1:22844455-22844474 None:intergenic 30.0%
AATGTTAACAAGCTTCTAGT+TGG - chr8.1:22845771-22845790 MS.gene71994:intron 30.0%
ATTGATCCAACGGTTAAAAA+TGG - chr8.1:22843237-22843256 MS.gene71994:intron 30.0%
CCAATAAGAATTGAGGAAAA+AGG - chr8.1:22843422-22843441 MS.gene71994:intron 30.0%
GCTGAAATTAAAAACAGGTA+TGG - chr8.1:22846048-22846067 MS.gene71994:intron 30.0%
TAACATTGTTAAAGCTCTCT+TGG + chr8.1:22845713-22845732 None:intergenic 30.0%
TCCTCAAATAAAACTTCTCA+TGG + chr8.1:22845262-22845281 None:intergenic 30.0%
TCTTGACCATAAACAATGTA+AGG - chr8.1:22844651-22844670 MS.gene71994:intron 30.0%
TGAAATTGGAATTCCTTTCA+TGG - chr8.1:22845972-22845991 MS.gene71994:intron 30.0%
TTGATCCAACGGTTAAAAAT+GGG - chr8.1:22843238-22843257 MS.gene71994:intron 30.0%
! AATTGGTAACTGGAAAAACT+TGG + chr8.1:22845338-22845357 None:intergenic 30.0%
! CAGTATCTATTGACTAAACA+AGG + chr8.1:22846135-22846154 None:intergenic 30.0%
! CCTTTTTCCTCAATTCTTAT+TGG + chr8.1:22843425-22843444 None:intergenic 30.0%
! GAACATATGGATGTGTTTTT+AGG - chr8.1:22844550-22844569 MS.gene71994:intron 30.0%
! TAACATTTTCACTTGCATAG+CGG + chr8.1:22845758-22845777 None:intergenic 30.0%
! TTCCTTTTTACATTGTCTTG+GGG - chr8.1:22845630-22845649 MS.gene71994:intron 30.0%
! TTGTTCAAGCTTTTGTTGAT+TGG - chr8.1:22844356-22844375 MS.gene71994:intron 30.0%
! TTTCTCATGTTTTCGTGTTT+TGG - chr8.1:22843082-22843101 MS.gene71994:CDS 30.0%
!! ATTTTCTAAAGAAGGAAGCA+TGG + chr8.1:22845013-22845032 None:intergenic 30.0%
!!! AGAGTCATTTTTATGTGAGA+AGG + chr8.1:22844761-22844780 None:intergenic 30.0%
!!! TCCATGAGAAGTTTTATTTG+AGG - chr8.1:22845258-22845277 MS.gene71994:intron 30.0%
AAATGGGATCTGACATAAAG+TGG - chr8.1:22843254-22843273 MS.gene71994:intron 35.0%
AACACGAAAACATGAGAAAG+CGG + chr8.1:22843081-22843100 None:intergenic 35.0%
AATGGGATCTGACATAAAGT+GGG - chr8.1:22843255-22843274 MS.gene71994:intron 35.0%
CCATAAACAATGTAAGGTCA+AGG - chr8.1:22844657-22844676 MS.gene71994:intron 35.0%
CCTTGACCTTACATTGTTTA+TGG + chr8.1:22844660-22844679 None:intergenic 35.0%
CTATTTGTGGTTTGATCGAA+CGG - chr8.1:22844724-22844743 MS.gene71994:intron 35.0%
GAAGATGAAAGAGATATGGT+GGG - chr8.1:22843208-22843227 MS.gene71994:intron 35.0%
GCTTTAACAATGTTAAGCAG+TGG - chr8.1:22845718-22845737 MS.gene71994:intron 35.0%
GGAATGAGCCATTTATCAAA+TGG + chr8.1:22845317-22845336 None:intergenic 35.0%
GTAGTGTTAAATGAACAGAG+AGG + chr8.1:22843618-22843637 None:intergenic 35.0%
TATATGCACCAGAGAGTAAA+AGG - chr8.1:22844622-22844641 MS.gene71994:intron 35.0%
TGGCTGCTGAAATTAAAAAC+AGG - chr8.1:22846043-22846062 MS.gene71994:intron 35.0%
TGGGATTAAGATTGATCCAA+CGG - chr8.1:22843227-22843246 MS.gene71994:intron 35.0%
TTCCCCAAGACAATGTAAAA+AGG + chr8.1:22845635-22845654 None:intergenic 35.0%
! CCATTCTGTGAAAAAAGTAC+CGG + chr8.1:22846192-22846211 None:intergenic 35.0%
! GATTTACTCCTTTTACTCTC+TGG + chr8.1:22844633-22844652 None:intergenic 35.0%
! TTAGCACTAGTTTCCATGAA+AGG + chr8.1:22845988-22846007 None:intergenic 35.0%
!! AGGCATTGAAAAAGTGTGTA+TGG - chr8.1:22844570-22844589 MS.gene71994:intron 35.0%
!! CTTTTGTTGATTGGAGATTC+TGG - chr8.1:22844365-22844384 MS.gene71994:intron 35.0%
!! TATTGGTTCTGAACTCTGAT+GGG - chr8.1:22845123-22845142 MS.gene71994:intron 35.0%
!! TTATTGGTTCTGAACTCTGA+TGG - chr8.1:22845122-22845141 MS.gene71994:intron 35.0%
!!! GTTTTTAATTTCAGCAGCCA+TGG + chr8.1:22846043-22846062 None:intergenic 35.0%
!!! TGTGTTTTCGATGTTGTTTC+CGG - chr8.1:22843157-22843176 MS.gene71994:intron 35.0%
AACACTTCGGCTCAATTATC+TGG - chr8.1:22845438-22845457 MS.gene71994:intron 40.0%
ACACTTCGGCTCAATTATCT+GGG - chr8.1:22845439-22845458 MS.gene71994:intron 40.0%
ACATTGTCTTGGGGAAACAA+TGG - chr8.1:22845639-22845658 MS.gene71994:intron 40.0%
AGTAGCTGCTAGTTATAGTC+CGG + chr8.1:22845553-22845572 None:intergenic 40.0%
ATAACTAGCAGCTACTATCG+TGG - chr8.1:22845557-22845576 MS.gene71994:intron 40.0%
CAATGTGGAACAAGCTTTCA+TGG - chr8.1:22846017-22846036 MS.gene71994:intron 40.0%
CAGAGTCACATCTCTATTTG+TGG - chr8.1:22844711-22844730 MS.gene71994:intron 40.0%
CAGGCATTTGCAGATGAAAT+TGG - chr8.1:22845958-22845977 MS.gene71994:intron 40.0%
CCAGTTACCAATTGTGTTCT+TGG - chr8.1:22845345-22845364 MS.gene71994:intron 40.0%
GACAGCTATATCAGTACCAT+CGG - chr8.1:22844904-22844923 MS.gene71994:intron 40.0%
GCAAATGCCTGATGTACAAA+AGG + chr8.1:22845949-22845968 None:intergenic 40.0%
GGAAGATGAAAGAGATATGG+TGG - chr8.1:22843207-22843226 MS.gene71994:intron 40.0%
GGAGGAAGATGAAAGAGATA+TGG - chr8.1:22843204-22843223 MS.gene71994:intron 40.0%
TAACTAGCAGCTACTATCGT+GGG - chr8.1:22845558-22845577 MS.gene71994:intron 40.0%
TACATAGTGAGATTGTGAGC+AGG - chr8.1:22844598-22844617 MS.gene71994:intron 40.0%
TGCTAAAAATGCCTCCAATG+TGG - chr8.1:22846002-22846021 MS.gene71994:intron 40.0%
TGGAAGTGGGACATGTATAT+GGG + chr8.1:22845875-22845894 None:intergenic 40.0%
TTGATTGGAGATTCTGGTGT+GGG - chr8.1:22844371-22844390 MS.gene71994:intron 40.0%
! CATGAAAGCTTGTTCCACAT+TGG + chr8.1:22846019-22846038 None:intergenic 40.0%
! CCAAGAACACAATTGGTAAC+TGG + chr8.1:22845348-22845367 None:intergenic 40.0%
! GTTTGTGCCTTTTGTACATC+AGG - chr8.1:22845939-22845958 MS.gene71994:intron 40.0%
! TTGAGCCGAAGTGTTTGAAA+AGG + chr8.1:22845433-22845452 None:intergenic 40.0%
!! AATCACCTTTGCTGTTTCAG+AGG + chr8.1:22845832-22845851 None:intergenic 40.0%
!! CAGATCCCATTTTTAACCGT+TGG + chr8.1:22843246-22843265 None:intergenic 40.0%
!! CAGTGCGGATTTTCTAAAGA+AGG + chr8.1:22845021-22845040 None:intergenic 40.0%
!! CTCATGTTTTCGTGTTTTGG+AGG - chr8.1:22843085-22843104 MS.gene71994:CDS 40.0%
!! TGGTACTGATATAGCTGTCA+AGG + chr8.1:22844903-22844922 None:intergenic 40.0%
!!! CCGGTACTTTTTTCACAGAA+TGG - chr8.1:22846189-22846208 MS.gene71994:CDS 40.0%
AACTAGCAGCTACTATCGTG+GGG - chr8.1:22845559-22845578 MS.gene71994:intron 45.0%
AACTTACAGCAAACCTCAGG+AGG + chr8.1:22844409-22844428 None:intergenic 45.0%
ACTCTCTCACTTGACAGTCA+AGG - chr8.1:22844776-22844795 MS.gene71994:intron 45.0%
CAGAACTTACAGCAAACCTC+AGG + chr8.1:22844412-22844431 None:intergenic 45.0%
CCGGAGAAATGGACACAAAA+CGG - chr8.1:22843125-22843144 MS.gene71994:intron 45.0%
CTATATCAGTACCATCGGAG+TGG - chr8.1:22844909-22844928 MS.gene71994:intron 45.0%
CTGGAAGTGGGACATGTATA+TGG + chr8.1:22845876-22845895 None:intergenic 45.0%
GGAAGTGGGACATGTATATG+GGG + chr8.1:22845874-22845893 None:intergenic 45.0%
GTTGATTGGAGATTCTGGTG+TGG - chr8.1:22844370-22844389 MS.gene71994:intron 45.0%
TAACCTCATTTACTCGTCGC+CGG - chr8.1:22846170-22846189 MS.gene71994:CDS 45.0%
TAGTTGTCAAAGCGGAAACG+CGG + chr8.1:22844284-22844303 None:intergenic 45.0%
TGGAAACAAGAGCGATCTCT+CGG - chr8.1:22845791-22845810 MS.gene71994:intron 45.0%
! ATTGTATAGTGGGACACTGC+TGG - chr8.1:22845515-22845534 MS.gene71994:intron 45.0%
! CCGTTTTGTGTCCATTTCTC+CGG + chr8.1:22843128-22843147 None:intergenic 45.0%
! GAAAGCTTGTTCCACATTGG+AGG + chr8.1:22846016-22846035 None:intergenic 45.0%
! TCACTGGTTGTCCTCGAATT+TGG + chr8.1:22846252-22846271 None:intergenic 45.0%
! TCGGCTCAATTATCTGGGAT+TGG - chr8.1:22845444-22845463 MS.gene71994:intron 45.0%
!! TGTGTCCTCTGAAACAGCAA+AGG - chr8.1:22845824-22845843 MS.gene71994:intron 45.0%
!!! CGTGTTTTGGAGGTTGTTTC+CGG - chr8.1:22843095-22843114 MS.gene71994:CDS 45.0%
AATTTGGACTGTTGCAGGCC+TGG + chr8.1:22846236-22846255 None:intergenic 50.0%
AGGACAACCAGTGAACCAGA+AGG - chr8.1:22846258-22846277 MS.gene71994:CDS 50.0%
CCTCGAATTTGGACTGTTGC+AGG + chr8.1:22846241-22846260 None:intergenic 50.0%
CCTGCAACAGTCCAAATTCG+AGG - chr8.1:22846238-22846257 MS.gene71994:CDS 50.0%
CTGCTGGTCAAGAACGTTTC+CGG - chr8.1:22845531-22845550 MS.gene71994:intron 50.0%
GAAAATCCGCACTGTTGAGC+AGG - chr8.1:22845027-22845046 MS.gene71994:intron 50.0%
GCTTACAAAGTCCACTCCGA+TGG + chr8.1:22844923-22844942 None:intergenic 50.0%
GGAAATTGCTGACAAAGGGC+CGG + chr8.1:22845614-22845633 None:intergenic 50.0%
GGAACAAGCTTTCATGGCCA+TGG - chr8.1:22846023-22846042 MS.gene71994:intron 50.0%
GGCCACCCTAAAAATTGACG+CGG + chr8.1:22844253-22844272 None:intergenic 50.0%
! GTTGTTTCCGGCAAGAGAGA+GGG - chr8.1:22843169-22843188 MS.gene71994:intron 50.0%
!! TGTTGTTTCCGGCAAGAGAG+AGG - chr8.1:22843168-22843187 MS.gene71994:intron 50.0%
AGCTACTATCGTGGGGCTCA+TGG - chr8.1:22845566-22845585 MS.gene71994:intron 55.0%
ATCCGCACTGTTGAGCAGGA+TGG - chr8.1:22845031-22845050 MS.gene71994:intron 55.0%
CAACCAGTGAACCAGAAGGC+TGG - chr8.1:22846262-22846281 MS.gene71994:CDS 55.0%
CCCTAAAAATTGACGCGGCG+CGG + chr8.1:22844248-22844267 None:intergenic 55.0%
GCAAGTCATGTCTCCTCCTG+AGG - chr8.1:22844393-22844412 MS.gene71994:intron 55.0%
GGATCCAAAGCGGGTCAAAG+CGG - chr8.1:22843055-22843074 MS.gene71994:CDS 55.0%
GTGGGCGCTATTACATGACG+CGG + chr8.1:22844211-22844230 None:intergenic 55.0%
TCCCATCCTGCTCAACAGTG+CGG + chr8.1:22845036-22845055 None:intergenic 55.0%
TCCGCACTGTTGAGCAGGAT+GGG - chr8.1:22845032-22845051 MS.gene71994:intron 55.0%
! ACCGCGCCGCGTCAATTTTT+AGG - chr8.1:22844244-22844263 MS.gene71994:intron 55.0%
! CCGCGCCGCGTCAATTTTTA+GGG - chr8.1:22844245-22844264 MS.gene71994:intron 55.0%
! GTACCGGCGACGAGTAAATG+AGG + chr8.1:22846176-22846195 None:intergenic 55.0%
!! CAACCAGCCTTCTGGTTCAC+TGG + chr8.1:22846268-22846287 None:intergenic 55.0%
!! CGCCGCGTCAATTTTTAGGG+TGG - chr8.1:22844248-22844267 MS.gene71994:intron 55.0%
AATTGACGCGGCGCGGTATG+CGG + chr8.1:22844241-22844260 None:intergenic 60.0%
ACGAGCAGCAACCAGCCTTC+TGG + chr8.1:22846276-22846295 None:intergenic 60.0%
AGAGGGACAAGGGGAGAAGG+AGG - chr8.1:22843186-22843205 MS.gene71994:intron 60.0%
CCATTTCTCCGGCAACTCGC+CGG + chr8.1:22843117-22843136 None:intergenic 60.0%
CCCTTGTCCCTCTCTCTTGC+CGG + chr8.1:22843179-22843198 None:intergenic 60.0%
CCGGCAAGAGAGAGGGACAA+GGG - chr8.1:22843176-22843195 MS.gene71994:intron 60.0%
CGGCAAGAGAGAGGGACAAG+GGG - chr8.1:22843177-22843196 MS.gene71994:intron 60.0%
GAGAGAGGGACAAGGGGAGA+AGG - chr8.1:22843183-22843202 MS.gene71994:intron 60.0%
GTCAACCTGCCAACAGTGCC+AGG - chr8.1:22846215-22846234 MS.gene71994:CDS 60.0%
TCCGGCAAGAGAGAGGGACA+AGG - chr8.1:22843175-22843194 MS.gene71994:intron 60.0%
TGTTGCAGGCCTGGCACTGT+TGG + chr8.1:22846227-22846246 None:intergenic 60.0%
! GGTTGTTTCCGGCGAGTTGC+CGG - chr8.1:22843106-22843125 MS.gene71994:CDS 60.0%
CCGGCGAGTTGCCGGAGAAA+TGG - chr8.1:22843114-22843133 MS.gene71994:CDS 65.0%
GTCAAAGCGGAAACGCGGCG+CGG + chr8.1:22844279-22844298 None:intergenic 65.0%
GAGCGGGGCGGATCCAAAGC+GGG - chr8.1:22843046-22843065 MS.gene71994:CDS 70.0%
GCAGGCCTGGCACTGTTGGC+AGG + chr8.1:22846223-22846242 None:intergenic 70.0%
GCGGTATGCGGACGCGACGT+GGG + chr8.1:22844229-22844248 None:intergenic 70.0%
GGAGCGGGGCGGATCCAAAG+CGG - chr8.1:22843045-22843064 MS.gene71994:CDS 70.0%
! GCGGCCGCTTTGACCCGCTT+TGG + chr8.1:22843062-22843081 None:intergenic 70.0%
CGCGGTATGCGGACGCGACG+TGG + chr8.1:22844230-22844249 None:intergenic 75.0%
! AGCGGAAACGCGGCGCGGCG+CGG + chr8.1:22844274-22844293 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 22843040 22846300 22843040 ID=MS.gene71994
chr8.1 mRNA 22843040 22846300 22843040 ID=MS.gene71994.t1;Parent=MS.gene71994
chr8.1 exon 22846092 22846300 22846092 ID=MS.gene71994.t1.exon1;Parent=MS.gene71994.t1
chr8.1 CDS 22846092 22846300 22846092 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22844919 22844991 22844919 ID=MS.gene71994.t1.exon2;Parent=MS.gene71994.t1
chr8.1 CDS 22844919 22844991 22844919 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22844404 22844451 22844404 ID=MS.gene71994.t1.exon3;Parent=MS.gene71994.t1
chr8.1 CDS 22844404 22844451 22844404 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22844265 22844312 22844265 ID=MS.gene71994.t1.exon4;Parent=MS.gene71994.t1
chr8.1 CDS 22844265 22844312 22844265 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22843745 22843816 22843745 ID=MS.gene71994.t1.exon5;Parent=MS.gene71994.t1
chr8.1 CDS 22843745 22843816 22843745 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22843495 22843650 22843495 ID=MS.gene71994.t1.exon6;Parent=MS.gene71994.t1
chr8.1 CDS 22843495 22843650 22843495 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22843276 22843379 22843276 ID=MS.gene71994.t1.exon7;Parent=MS.gene71994.t1
chr8.1 CDS 22843276 22843379 22843276 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
chr8.1 exon 22843040 22843133 22843040 ID=MS.gene71994.t1.exon8;Parent=MS.gene71994.t1
chr8.1 CDS 22843040 22843133 22843040 ID=cds.MS.gene71994.t1;Parent=MS.gene71994.t1
Gene Sequence

>MS.gene71994

ATGGTGGAGCGGGGCGGATCCAAAGCGGGTCAAAGCGGCCGCTTTCTCATGTTTTCGTGTTTTGGAGGTTGTTTCCGGCGAGTTGCCGGAGAAATGGACACAAAACGGTCGTTTTTTTGTGTTTTCGATGTTGTTTCCGGCAAGAGAGAGGGACAAGGGGAGAAGGAGGAAGATGAAAGAGATATGGTGGGATTAAGATTGATCCAACGGTTAAAAATGGGATCTGACATAAAGTGGGACAGCTGTAACCCACTACCATATATTAATATAGAGGAATGATATTTTGACAACCAATTTTCAACAACTTTTGTGACAACTCTCTTTCATACTCTCATTATACTTTTATTCTCTCTCTTCCTTTTTCTCTCTCTATTGTTATTGTCCAATAAGAATTGAGGAAAAAGGTTGTCCCTAAAAAGTTGTTGAAAATTGGATGTCAAAATATCATTCCTGATTAATATATGGTGAGAATATAAGTTCTTTGTCGTTTTGCTTGTTTCAGTGCGTACAGCTGTAACCACATTCTTTTGCATTCTTATTTATCACTATAATGTTTATTTATTTTTTAATTGAATCCTCTCTGTTCATTTAACACTACAGTACATTAGTACATTCTTTCTGTATATACTTTACATTCTTTTTATTTTCAATAATTATTAATAATTAATTGCTAATGTGATTTAAAAAAGTCAAACTCAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTTGTTTTACAAAATTAATAGTAATAATACTTTCTGCTTCATAAAAAAAATAGGAATAATAGTTTTTTAAAGGAATAATAATTAATACATAGTATAGTATATTGTTTTTAAATTATTGCATGATATATTATTTGTCTTTATAAAAAAAATATAGTATGATATATAGTTTTTAAATTAATAAGTATATACATTTAATCTGTTTCTTAAATACATTGTTTAAGGTATTTTACTAAATTTTTTAGCATTATGGTATATTGTTTAAGTATATTATTTAAGGTATTTTAATACTTCTTTTTTAACATTATGATATTTTATTTCAAATTATGAATACATTATGAATTTTGAGTAATATTTAAGTTGTTTTAGTATTTCTTTTTCAACATTATAGTATTTTAGTATTAAATATATTAGTGTCCGCGTCATGTAATAGCGCCCACGTCGCGTCCGCATACCGCGCCGCGTCAATTTTTAGGGTGGCCGCGCCGCGCCGCGTTTCCGCTTTGACAACTATGATAATATCATATCTTTGATTGGGGCATCCTATCTTATTTTCAGTGACTATTTGTTCAAGCTTTTGTTGATTGGAGATTCTGGTGTGGGCAAGTCATGTCTCCTCCTGAGGTTTGCTGTAAGTTCTGAGCCTCTGTTTTTTTTTTTTCCTTCTTTAGTTATGGTCATCTTTTTTCAATTAATGAAAAATGAAATTGAATATTCCCATTTTTTACTATTACATTTTCATACAAAGTTGAATATAAAGAACATATGGATGTGTTTTTAGGCATTGAAAAAGTGTGTATGGTGTCATACATAGTGAGATTGTGAGCAGGCTATATGCACCAGAGAGTAAAAGGAGTAAATCTTGACCATAAACAATGTAAGGTCAAGGTTAAAAGCTTTTATTAGTCACTTCATTTTTTCAGAGTCACATCTCTATTTGTGGTTTGATCGAACGGCAAGATTTACTCCTTCTCACATAAAAATGACTCTCTCACTTGACAGTCAAGGATGCAATGTCAAACAAAAGCTTTCACCTTGAATGATATTTTATGAAGTGGAGGTTACACTTCTTAATATTTTTCTTTTTCTGTGAAACAGGATGATTCATACCTTGACAGCTATATCAGTACCATCGGAGTGGACTTTGTAAGCATTCCATATCTACCATTTAAACTTATTTCCATGTTGTTTTCAACTTTAGTATGTGACTTGTTATTTACCATGCTTCCTTCTTTAGAAAATCCGCACTGTTGAGCAGGATGGGAAGACCATTAAACTTCAAATTGTAAGTCACTGACTAAGTTAATATTATTTGAATACTGAACAAGTTGTTATTGGTTCTGAACTCTGATGGGAGTTTTACACGAGTCTATCTATGCCAATTTGTTTTCTACATCTAAATTACGTTTTTGAGATTGTTTCAATTAGATGTACAAAAATCAATTTGAACATGCGTAGAAAAAATTATCCATGAGAAGTTTTATTTGAGGATATCTTTTTTTTTTTGAGTAATTATTATATGTCCATTTGATAAATGGCTCATTCCAAGTTTTTCCAGTTACCAATTGTGTTCTTGGATCATTTGAACAGTATTATTTGAGGTTATAAAGTTACCCATTGAATATTAGGAAATCAATTTCCTTTTCAAACACTTCGGCTCAATTATCTGGGATTGGTTCTTTACTGTATTCTGTAATTGTTGACAGATTTTTCTGCATTTTTTTATTGTATAGTGGGACACTGCTGGTCAAGAACGTTTCCGGACTATAACTAGCAGCTACTATCGTGGGGCTCATGGCATAATTGTGAGTCTTTTTAAACCGGCCCTTTGTCAGCAATTTCCTTTTTACATTGTCTTGGGGAAACAATGGTGTAATCTTTTTAATTTTTTTTTTGCAGGTTGTTTACGATGTCACTGACCAAGAGAGCTTTAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGCTATGCAAGTGAAAATGTTAACAAGCTTCTAGTTGGAAACAAGAGCGATCTCTCGGACAAAAAAGTTGTGTCCTCTGAAACAGCAAAGGTGATTCTAAATTTGTTGATTTATGCCCCATATACATGTCCCACTTCCAGTGACATTTTTTTTTAAGTCCTTCCTTTAATCTAATATTTTGATGTTTGTGCCTTTTGTACATCAGGCATTTGCAGATGAAATTGGAATTCCTTTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAAGCTTTCATGGCCATGGCTGCTGAAATTAAAAACAGGTATGGAATTTCTGTATGTAAAGGACAACTATTGAGCTTTTTGCATGAGTTTGTGAACTTCAAAGAACCTTGTTTAGTCAATAGATACTGATCTACCTTGATTATTAACCTCATTTACTCGTCGCCGGTACTTTTTTCACAGAATGGCGAGTCAACCTGCCAACAGTGCCAGGCCTGCAACAGTCCAAATTCGAGGACAACCAGTGAACCAGAAGGCTGGTTGCTGCTCGTCTTAG

Protein sequence

>MS.gene71994.t1

MVERGGSKAGQSGRFLMFSCFGGCFRRVAGEMDTKRSFFCVFDVVSGKREGQGEKEEDERDMVGLRLIQRDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPATVQIRGQPVNQKAGCCSS