AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70216


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70216.t1 MTR_8g093740 99.029 206 2 0 1 206 1 206 2.35e-150 422
MS.gene70216.t1 MTR_3g096350 90.291 206 19 1 1 206 1 205 5.64e-136 386
MS.gene70216.t1 MTR_1g029450 88.265 196 22 1 9 203 13 208 2.32e-127 364
MS.gene70216.t1 MTR_8g093740 96.429 168 6 0 39 206 6 173 1.24e-116 336
MS.gene70216.t1 MTR_8g093750 100.000 162 0 0 206 367 68 229 4.77e-114 331
MS.gene70216.t1 MTR_1g062760 67.662 201 65 0 10 210 11 211 1.25e-100 296
MS.gene70216.t1 MTR_7g103070 67.513 197 63 1 11 206 14 210 9.50e-100 294
MS.gene70216.t1 MTR_1g090717 66.667 195 61 2 1 191 1 195 2.49e-89 268
MS.gene70216.t1 MTR_3g096350 88.550 131 14 1 1 131 1 130 1.02e-79 241
MS.gene70216.t1 MTR_3g096350 88.550 131 14 1 1 131 1 130 1.48e-79 240
MS.gene70216.t1 MTR_7g103070 67.974 153 49 0 54 206 2 154 1.06e-78 239
MS.gene70216.t1 MTR_2g005500 50.000 202 96 5 8 206 4 203 1.92e-57 186
MS.gene70216.t1 MTR_7g081700 55.294 170 73 3 9 177 4 171 1.03e-55 181
MS.gene70216.t1 MTR_8g006970 53.714 175 78 3 9 182 4 176 2.15e-55 180
MS.gene70216.t1 MTR_8g006970 54.167 168 74 3 11 177 20 185 3.49e-53 175
MS.gene70216.t1 MTR_1g068740 50.610 164 77 4 7 168 9 170 2.33e-50 168
MS.gene70216.t1 MTR_1g068730 50.610 164 77 4 7 168 9 170 5.48e-50 167
MS.gene70216.t1 MTR_1g115325 51.235 162 75 4 9 168 11 170 8.17e-50 166
MS.gene70216.t1 MTR_7g100020 51.235 162 75 4 9 168 11 170 1.72e-49 166
MS.gene70216.t1 MTR_6g021790 49.405 168 82 3 10 176 3 168 8.39e-49 164
MS.gene70216.t1 MTR_2g096550 48.795 166 82 3 5 168 7 171 8.90e-49 164
MS.gene70216.t1 MTR_8g031660 43.147 197 105 4 12 203 5 199 3.77e-48 162
MS.gene70216.t1 MTR_8g031870 46.067 178 89 4 12 188 5 176 9.10e-48 160
MS.gene70216.t1 MTR_6g079550 48.851 174 86 3 8 180 7 178 2.39e-47 160
MS.gene70216.t1 MTR_2g027660 50.000 160 77 3 10 168 3 160 4.90e-47 159
MS.gene70216.t1 MTR_7g051940 46.305 203 85 6 12 194 12 210 5.58e-46 157
MS.gene70216.t1 MTR_2g005510 41.327 196 109 4 6 197 8 201 2.29e-45 155
MS.gene70216.t1 MTR_2g083860 47.619 168 85 3 9 175 9 174 2.85e-45 155
MS.gene70216.t1 MTR_2g014990 42.132 197 100 4 1 185 1 195 1.30e-44 153
MS.gene70216.t1 MTR_4g063160 48.780 164 78 5 9 168 11 172 1.45e-44 153
MS.gene70216.t1 MTR_8g031680 48.101 158 79 3 12 168 5 160 2.56e-44 152
MS.gene70216.t1 MTR_4g064897 42.604 169 94 3 8 175 7 173 2.66e-44 152
MS.gene70216.t1 MTR_4g088090 41.624 197 101 4 1 185 1 195 2.94e-44 152
MS.gene70216.t1 MTR_3g086980 38.756 209 113 5 6 210 9 206 3.86e-44 152
MS.gene70216.t1 MTR_8g027220 45.509 167 88 3 7 172 20 184 1.33e-43 151
MS.gene70216.t1 MTR_2g075950 44.643 168 90 3 9 175 9 174 1.56e-43 150
MS.gene70216.t1 MTR_2g090865 46.552 174 90 3 8 180 6 177 1.90e-43 150
MS.gene70216.t1 MTR_4g079350 42.132 197 100 4 1 185 1 195 1.93e-43 150
MS.gene70216.t1 MTR_3g069510 40.984 183 102 4 8 186 7 187 3.02e-43 149
MS.gene70216.t1 MTR_8g089985 38.942 208 112 5 7 210 11 207 6.50e-43 149
MS.gene70216.t1 MTR_1g078200 43.716 183 100 3 11 192 12 192 7.57e-43 149
MS.gene70216.t1 MTR_8g031830 46.795 156 80 3 12 166 5 158 5.39e-42 145
MS.gene70216.t1 MTR_1g068730 47.059 153 77 4 6 156 8 158 8.79e-42 144
MS.gene70216.t1 MTR_1g068740 47.059 153 75 5 7 156 9 158 1.36e-41 144
MS.gene70216.t1 MTR_8g036220 43.137 204 111 4 11 213 14 213 1.05e-40 143
MS.gene70216.t1 MTR_8g107070 44.828 174 93 3 8 180 9 180 1.68e-40 144
MS.gene70216.t1 MTR_4g099470 51.449 138 65 2 38 175 10 145 1.97e-40 141
MS.gene70216.t1 MTR_7g405790 44.118 170 92 3 12 180 14 181 4.02e-40 141
MS.gene70216.t1 MTR_1g052475 37.681 207 117 5 7 203 9 213 1.30e-39 140
MS.gene70216.t1 MTR_0262s0050 41.667 168 95 3 9 175 11 176 1.72e-39 140
MS.gene70216.t1 MTR_7g117910 45.946 148 77 3 8 154 15 160 4.60e-37 133
MS.gene70216.t1 MTR_1g094220 42.012 169 93 5 15 181 33 198 1.25e-35 129
MS.gene70216.t1 MTR_1g094220 41.875 160 89 4 15 172 33 190 7.32e-35 127
MS.gene70216.t1 MTR_4g098950 42.138 159 89 3 14 171 10 166 1.89e-34 126
MS.gene70216.t1 MTR_5g076590 42.593 162 90 3 15 175 12 171 2.29e-34 125
MS.gene70216.t1 MTR_5g013900 41.509 159 90 3 14 171 10 166 1.35e-33 124
MS.gene70216.t1 MTR_8g090215 40.881 159 91 3 14 171 10 166 1.84e-33 124
MS.gene70216.t1 MTR_1g094220 42.038 157 87 4 15 169 33 187 2.33e-33 123
MS.gene70216.t1 MTR_3g087160 41.509 159 90 3 14 171 10 166 2.75e-33 123
MS.gene70216.t1 MTR_8g103550 39.506 162 95 3 15 175 11 170 4.30e-33 122
MS.gene70216.t1 MTR_1g094220 42.038 157 87 4 15 169 33 187 7.45e-33 123
MS.gene70216.t1 MTR_3g064390 40.123 162 94 3 15 175 12 171 1.49e-32 121
MS.gene70216.t1 MTR_2g102060 40.506 158 91 3 15 171 12 167 2.65e-32 120
MS.gene70216.t1 MTR_4g069850 36.416 173 102 5 13 178 8 179 1.05e-28 111
MS.gene70216.t1 MTR_2g101890 38.012 171 98 5 13 176 10 179 3.00e-28 110
MS.gene70216.t1 MTR_4g012940 36.842 171 100 5 13 176 8 177 3.10e-27 107
MS.gene70216.t1 MTR_2g005500 35.149 202 86 5 8 206 4 163 1.67e-26 103
MS.gene70216.t1 MTR_8g092020 38.636 176 97 7 1 168 1 173 6.67e-26 103
MS.gene70216.t1 MTR_1g097420 37.423 163 94 5 13 168 8 169 1.90e-25 102
MS.gene70216.t1 MTR_3g064390 41.600 125 70 3 15 138 12 134 7.00e-24 96.7
MS.gene70216.t1 MTR_3g107707 34.637 179 110 5 5 181 4 177 7.85e-24 98.6
MS.gene70216.t1 MTR_3g107717 34.637 179 110 5 5 181 4 177 9.05e-24 98.2
MS.gene70216.t1 MTR_3g107713 34.637 179 110 5 5 181 4 177 9.92e-24 98.2
MS.gene70216.t1 MTR_3g078260 30.412 194 120 5 13 194 8 198 1.05e-23 97.8
MS.gene70216.t1 MTR_6g087980 32.402 179 106 5 13 179 6 181 1.60e-23 97.4
MS.gene70216.t1 MTR_2g090875 31.818 176 105 5 13 176 6 178 3.11e-23 96.3
MS.gene70216.t1 MTR_4g073250 30.526 190 117 5 13 190 6 192 4.93e-23 95.5
MS.gene70216.t1 MTR_4g088055 30.814 172 104 5 13 172 6 174 1.21e-21 91.7
MS.gene70216.t1 MTR_8g075240 31.250 176 106 5 13 176 6 178 6.67e-21 89.7
MS.gene70216.t1 MTR_1g097420 35.152 165 97 6 11 168 35 196 1.20e-20 90.1
MS.gene70216.t1 MTR_5g022600 30.682 176 107 5 13 176 6 178 2.92e-20 88.2
MS.gene70216.t1 MTR_6g039490 35.802 162 98 4 13 168 8 169 7.94e-20 87.4
MS.gene70216.t1 MTR_8g031810 43.617 94 38 2 12 104 5 84 2.74e-17 76.6
MS.gene70216.t1 MTR_4g113620 30.682 176 108 5 7 181 6 168 8.22e-17 79.0
MS.gene70216.t1 MTR_3g078260 32.773 119 76 3 15 132 10 125 1.28e-15 73.9
MS.gene70216.t1 MTR_1452s0010 45.588 68 36 1 43 110 12 78 5.60e-13 65.1
MS.gene70216.t1 MTR_8g091980 30.675 163 83 6 15 149 23 183 3.91e-11 63.5
MS.gene70216.t1 MTR_8g091980 30.675 163 83 6 15 149 23 183 4.07e-11 63.9
MS.gene70216.t1 MTR_5g078090 30.058 173 100 9 10 172 16 177 7.43e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70216.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.00e-125 360
MS.gene70216.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.00e-125 360
MS.gene70216.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.00e-125 360
MS.gene70216.t1 AT5G03530 68.137 204 65 0 1 204 1 204 1.40e-105 309
MS.gene70216.t1 AT5G03530 68.137 204 65 0 1 204 1 204 1.40e-105 309
MS.gene70216.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.42e-89 266
MS.gene70216.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.42e-89 266
MS.gene70216.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.42e-89 266
MS.gene70216.t1 AT3G09910 66.845 187 59 1 1 184 1 187 3.35e-82 249
MS.gene70216.t1 AT3G09910 66.845 187 59 1 1 184 1 187 3.35e-82 249
MS.gene70216.t1 AT4G17530 54.167 168 74 3 9 175 4 169 1.23e-54 179
MS.gene70216.t1 AT5G47200 54.167 168 74 3 9 175 4 169 2.11e-54 178
MS.gene70216.t1 AT1G02130 56.522 161 67 3 9 168 4 162 2.97e-54 177
MS.gene70216.t1 AT3G11730 55.556 162 69 3 8 168 3 162 1.88e-53 176
MS.gene70216.t1 AT4G35860 50.595 168 80 3 10 176 3 168 4.21e-52 172
MS.gene70216.t1 AT5G59840 51.852 162 74 4 9 168 11 170 9.22e-51 169
MS.gene70216.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.84e-50 168
MS.gene70216.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.84e-50 168
MS.gene70216.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.84e-50 168
MS.gene70216.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.10e-49 166
MS.gene70216.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.10e-49 166
MS.gene70216.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.10e-49 166
MS.gene70216.t1 AT4G17160 49.701 167 81 3 10 175 3 167 3.78e-49 164
MS.gene70216.t1 AT3G09900 52.121 165 75 4 6 168 8 170 7.76e-49 164
MS.gene70216.t1 AT5G03520 51.515 165 76 4 6 168 8 170 1.24e-48 164
MS.gene70216.t1 AT4G17170 50.000 160 77 3 10 168 3 160 1.18e-47 161
MS.gene70216.t1 AT1G05810 46.369 179 93 3 3 180 2 178 1.20e-46 158
MS.gene70216.t1 AT3G07410 47.953 171 86 3 11 180 10 178 1.69e-46 158
MS.gene70216.t1 AT1G05810 47.368 171 87 3 11 180 56 224 4.21e-46 159
MS.gene70216.t1 AT2G33870 45.455 176 93 3 1 175 1 174 5.67e-46 157
MS.gene70216.t1 AT4G39990 44.134 179 94 4 11 185 15 191 1.62e-45 155
MS.gene70216.t1 AT1G09630 42.132 197 102 4 8 203 7 192 2.09e-45 155
MS.gene70216.t1 AT1G18200 47.159 176 90 3 1 175 1 174 7.05e-45 154
MS.gene70216.t1 AT2G43130 45.614 171 90 3 11 180 10 178 1.37e-44 153
MS.gene70216.t1 AT1G28550 45.455 176 93 3 1 175 1 174 2.18e-44 152
MS.gene70216.t1 AT1G73640 46.023 176 92 3 1 175 1 174 2.62e-44 153
MS.gene70216.t1 AT1G06400 44.886 176 94 3 1 175 1 174 3.06e-44 152
MS.gene70216.t1 AT1G16920 45.294 170 90 3 7 175 7 174 3.47e-44 152
MS.gene70216.t1 AT5G60860 42.132 197 100 4 1 185 1 195 5.83e-44 151
MS.gene70216.t1 AT3G46830 43.787 169 92 3 8 175 7 173 1.24e-43 150
MS.gene70216.t1 AT3G46830 43.787 169 92 3 8 175 7 173 1.24e-43 150
MS.gene70216.t1 AT2G31680 41.429 210 112 4 11 211 10 217 1.27e-43 150
MS.gene70216.t1 AT5G47520 45.614 171 90 3 11 180 12 180 1.45e-43 150
MS.gene70216.t1 AT5G45750 45.833 168 88 3 9 175 9 174 1.54e-43 150
MS.gene70216.t1 AT1G07410 40.541 185 104 4 8 188 7 189 1.55e-43 150
MS.gene70216.t1 AT4G18430 44.318 176 95 3 1 175 1 174 3.44e-43 149
MS.gene70216.t1 AT5G59150 42.353 170 95 3 7 175 6 173 4.63e-43 149
MS.gene70216.t1 AT3G15060 42.541 181 101 3 1 180 1 179 3.19e-42 147
MS.gene70216.t1 AT5G65270 40.936 171 98 3 8 177 12 180 4.12e-42 147
MS.gene70216.t1 AT4G18800 43.931 173 94 3 9 180 9 179 1.23e-41 145
MS.gene70216.t1 AT3G12160 40.110 182 103 4 7 184 9 188 3.05e-40 142
MS.gene70216.t1 AT1G01200 42.690 171 94 4 8 176 23 191 2.17e-39 140
MS.gene70216.t1 AT5G47960 39.267 191 108 5 4 188 6 194 5.37e-39 139
MS.gene70216.t1 AT4G39890 41.530 183 103 3 14 193 10 191 1.22e-38 137
MS.gene70216.t1 AT4G35860 50.407 123 59 2 54 176 2 122 7.70e-36 129
MS.gene70216.t1 AT5G10260 42.138 159 89 3 14 171 10 166 6.14e-35 127
MS.gene70216.t1 AT3G54840 42.767 159 87 4 15 171 35 191 8.86e-35 127
MS.gene70216.t1 AT3G54840 42.405 158 87 4 16 171 2 157 2.00e-34 125
MS.gene70216.t1 AT5G03520 49.612 129 62 3 41 168 34 160 2.08e-34 126
MS.gene70216.t1 AT2G22290 42.767 159 88 3 14 171 10 166 8.35e-34 124
MS.gene70216.t1 AT3G54840 42.675 157 86 4 15 169 35 189 1.63e-33 123
MS.gene70216.t1 AT4G19640 40.123 162 94 3 15 175 12 171 1.06e-32 121
MS.gene70216.t1 AT2G44610 40.881 159 91 3 14 171 10 166 1.20e-32 121
MS.gene70216.t1 AT5G45130 37.931 174 103 4 3 175 2 171 1.13e-31 119
MS.gene70216.t1 AT5G64990 41.026 156 89 3 14 168 8 161 1.67e-30 115
MS.gene70216.t1 AT5G45130 39.103 156 92 3 17 171 22 175 2.22e-29 113
MS.gene70216.t1 AT3G18820 38.415 164 93 5 13 169 8 170 3.86e-28 109
MS.gene70216.t1 AT1G22740 39.264 163 91 5 13 168 8 169 6.00e-28 108
MS.gene70216.t1 AT5G64990 39.264 163 89 4 14 168 8 168 7.93e-28 108
MS.gene70216.t1 AT1G52280 35.204 196 101 6 13 201 8 184 9.18e-28 108
MS.gene70216.t1 AT3G16100 38.596 171 97 5 13 176 8 177 1.52e-27 108
MS.gene70216.t1 AT5G39620 36.181 199 117 6 14 203 6 203 2.58e-27 107
MS.gene70216.t1 AT1G49300 37.423 163 94 5 13 168 8 169 1.08e-26 105
MS.gene70216.t1 AT1G49300 37.423 163 94 5 13 168 8 169 1.08e-26 105
MS.gene70216.t1 AT4G09720 39.264 163 91 5 13 168 8 169 1.22e-26 105
MS.gene70216.t1 AT2G21880 38.415 164 91 6 13 168 9 170 3.31e-26 104
MS.gene70216.t1 AT4G09720 38.690 168 90 6 13 168 8 174 6.22e-26 103
MS.gene70216.t1 AT5G59150 39.837 123 72 2 53 175 2 122 1.06e-25 102
MS.gene70216.t1 AT2G44690 33.333 180 105 5 13 180 18 194 1.60e-25 102
MS.gene70216.t1 AT4G09720 36.782 174 91 6 13 168 8 180 5.43e-25 101
MS.gene70216.t1 AT4G19640 40.625 128 73 3 15 141 12 137 1.77e-23 95.5
MS.gene70216.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.74e-23 95.9
MS.gene70216.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.74e-23 95.9
MS.gene70216.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.74e-23 95.9
MS.gene70216.t1 AT4G19640 39.850 133 77 3 15 146 12 142 3.99e-23 95.9
MS.gene70216.t1 AT5G55080 33.908 174 106 7 5 175 4 171 5.37e-23 96.3
MS.gene70216.t1 AT4G28950 31.073 177 109 5 13 179 6 179 1.18e-22 95.1
MS.gene70216.t1 AT5G20010 33.690 187 109 6 5 181 4 185 1.21e-22 95.1
MS.gene70216.t1 AT5G55190 34.682 173 106 5 5 175 4 171 1.40e-22 95.1
MS.gene70216.t1 AT3G51300 32.184 174 103 5 15 176 8 178 1.64e-22 94.4
MS.gene70216.t1 AT3G48040 32.044 181 107 6 13 181 8 184 2.83e-22 94.0
MS.gene70216.t1 AT5G20020 34.682 173 106 5 5 175 4 171 3.44e-22 94.0
MS.gene70216.t1 AT2G17800 31.818 176 105 5 13 176 6 178 8.06e-22 92.4
MS.gene70216.t1 AT2G17800 31.818 176 105 5 13 176 6 178 8.06e-22 92.4
MS.gene70216.t1 AT1G20090 30.682 176 107 5 13 176 5 177 8.18e-22 92.4
MS.gene70216.t1 AT1G75840 30.682 176 107 5 13 176 6 178 8.80e-22 92.0
MS.gene70216.t1 AT4G35950 31.250 176 106 5 13 176 6 178 5.27e-21 90.1
MS.gene70216.t1 AT5G62880 30.682 176 107 5 13 176 8 180 1.62e-20 89.4
MS.gene70216.t1 AT3G48040 32.353 170 99 6 15 171 10 176 3.10e-20 87.4
MS.gene70216.t1 AT4G09720 40.458 131 71 4 44 168 6 135 5.20e-20 86.7
MS.gene70216.t1 AT4G09720 40.458 131 71 4 44 168 6 135 5.20e-20 86.7
MS.gene70216.t1 AT4G09720 40.458 131 71 4 44 168 6 135 5.20e-20 86.7
MS.gene70216.t1 AT5G45970 29.070 172 107 5 13 172 6 174 6.16e-20 87.4
MS.gene70216.t1 AT2G21880 39.394 132 71 5 44 168 16 145 5.42e-19 84.3
MS.gene70216.t1 AT2G21880 39.394 132 71 5 44 168 16 145 5.42e-19 84.3
MS.gene70216.t1 AT5G62880 31.737 167 95 6 15 169 10 169 2.14e-18 82.8
MS.gene70216.t1 AT2G21880 33.537 164 91 7 13 168 9 162 2.49e-17 80.1
MS.gene70216.t1 AT4G35020 33.621 116 73 3 15 129 8 120 2.31e-15 73.2
MS.gene70216.t1 AT4G35020 33.621 116 73 3 15 129 8 120 2.31e-15 73.2
MS.gene70216.t1 AT3G51290 28.342 187 113 6 7 176 597 779 8.90e-15 76.3
MS.gene70216.t1 AT5G46025 36.538 104 65 1 74 177 6 108 1.25e-14 70.1
MS.gene70216.t1 AT3G49870 32.934 167 95 9 14 172 1 158 7.89e-12 63.5
MS.gene70216.t1 AT3G49870 32.749 171 98 9 10 172 16 177 1.23e-11 63.5
MS.gene70216.t1 AT5G67560 32.749 171 98 9 10 172 16 177 1.79e-11 62.8
MS.gene70216.t1 AT3G49860 30.818 159 93 8 14 163 12 162 4.26e-11 61.6
MS.gene70216.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.12e-11 63.9
MS.gene70216.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.12e-11 63.9
MS.gene70216.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.12e-11 63.9

Find 69 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACAAATCTCTCTGAAATA+TGG 0.215859 4.1:-8327627 MS.gene70216:CDS
TAGCACTGCATTCAATAAAT+AGG 0.259648 4.1:+8326458 None:intergenic
CAGAAAATGGATTCGAGTTC+AGG 0.266933 4.1:-8329112 None:intergenic
ATAGACTTTGCTAGGGAATA+TGG 0.277032 4.1:-8326484 MS.gene70216:CDS
AAGCTTGCCATTTGGGATAC+TGG 0.289194 4.1:-8328833 MS.gene70216:intron
TTGTTAATGATTGGGGATTC+TGG 0.299697 4.1:-8329061 MS.gene70216:CDS
TCTCTTTCAGAACGAGTTAC+TGG 0.303046 4.1:+8324636 None:intergenic
CCTTAGAGCCCTCGGCTAAA+AGG 0.308198 4.1:+8326097 None:intergenic
AAAGCTTAAGCTTGCCATTT+GGG 0.317285 4.1:-8328840 MS.gene70216:CDS
CTCTGTCACCAATTTCATAT+AGG 0.329797 4.1:+8323328 None:intergenic
TGTTCAAATTGTTAATGATT+GGG 0.336729 4.1:-8329069 MS.gene70216:CDS
GGAGAAAGGTAGAGAGTTGC+AGG 0.344873 4.1:-8324565 MS.gene70216:CDS
ATGTTCAAATTGTTAATGAT+TGG 0.346507 4.1:-8329070 MS.gene70216:CDS
GCACTAGCCCTATATGAAAT+TGG 0.346710 4.1:-8323336 MS.gene70216:CDS
AGTCTTGATTTGTTGAATAA+AGG 0.348413 4.1:+8327590 None:intergenic
ACCAAATAATGCAGCTGGTC+AGG 0.352646 4.1:-8328449 MS.gene70216:intron
GAAGAGTTGCAATTGTAAAC+TGG 0.356751 4.1:+8323095 None:intergenic
CAGGCTCTTGGTGACTTCAA+TGG 0.375521 4.1:-8324546 MS.gene70216:CDS
AGCATGCTTATCTGCATATA+AGG 0.380222 4.1:+8323135 None:intergenic
TCTGTCACCAATTTCATATA+GGG 0.381685 4.1:+8323329 None:intergenic
AAAAGCTTAAGCTTGCCATT+TGG 0.383397 4.1:-8328841 MS.gene70216:CDS
TTCTCGTGGTGTTGAGTTGT+TGG 0.401266 4.1:-8324586 MS.gene70216:CDS
TACAAATCTCTCTGAAATAT+GGG 0.405801 4.1:-8327626 MS.gene70216:CDS
GACGTTTCAATATCACTAAA+GGG 0.407097 4.1:-8323282 MS.gene70216:CDS
GATGATCTCTCTCCCACCAT+TGG 0.416793 4.1:-8328992 MS.gene70216:intron
GACTGCATGAAGATGCTTGT+TGG 0.424153 4.1:-8327571 MS.gene70216:CDS
AAGAGGGAATAGACTTTGCT+AGG 0.457004 4.1:-8326492 MS.gene70216:CDS
GTTCAAATTGTTAATGATTG+GGG 0.472425 4.1:-8329068 MS.gene70216:CDS
AGACGTTTCAATATCACTAA+AGG 0.477307 4.1:-8323283 MS.gene70216:CDS
GGTCAAATATGTCACGATAG+AGG 0.481991 4.1:-8328867 MS.gene70216:CDS
GGTAGAGAGTTGCAGGCTCT+TGG 0.490159 4.1:-8324558 MS.gene70216:CDS
AGAAGAAGCAATAGCAGAGA+TGG 0.490588 4.1:-8323307 MS.gene70216:CDS
ATGATTGGGGATTCTGGTGT+TGG 0.503280 4.1:-8329055 MS.gene70216:CDS
CTCTTTCAGAACGAGTTACT+GGG 0.504101 4.1:+8324637 None:intergenic
GGTGTTGAGTTGTTGGAGAA+AGG 0.504251 4.1:-8324579 MS.gene70216:CDS
ATATCACTAAAGGGGTATCC+AGG 0.504295 4.1:-8323273 MS.gene70216:intron
AGAAAATGGATTCGAGTTCA+GGG 0.507840 4.1:-8329111 None:intergenic
GCTTCAGCAACAACCGGTGG+TGG 0.512866 4.1:+8326029 None:intergenic
TAGAGTTGTGACAAAGAAAG+AGG 0.518206 4.1:-8326509 MS.gene70216:CDS
GTCAAATATGTCACGATAGA+GGG 0.528925 4.1:-8328866 MS.gene70216:CDS
TGTTGGAAACAAAGTAGATA+AGG 0.532932 4.1:-8327554 MS.gene70216:intron
AGAGTTGTGACAAAGAAAGA+GGG 0.538991 4.1:-8326508 MS.gene70216:CDS
TATGAAAGATCTGTAAAATG+AGG 0.541188 4.1:+8323067 None:intergenic
TGCAGAGAACTAATCAAACT+TGG 0.543993 4.1:+8323019 None:intergenic
TTGCATACTCAGAGAATGCT+AGG 0.548823 4.1:+8323370 None:intergenic
TCTTACTACAGAGGGGCTCA+AGG 0.553803 4.1:-8328403 MS.gene70216:CDS
TAGCATTCTCTGAGTATGCA+AGG 0.556080 4.1:-8323368 MS.gene70216:CDS
CAGTCTGATGCATCCACCAC+CGG 0.563159 4.1:-8326042 MS.gene70216:intron
TGACAAGTTCTTACTACAGA+GGG 0.566870 4.1:-8328411 MS.gene70216:CDS
GAAAGGAAACGAACCAATGG+TGG 0.568646 4.1:+8328979 None:intergenic
TTCTCTGAGTATGCAAGGGT+AGG 0.568807 4.1:-8323363 MS.gene70216:CDS
ATACATACCAGTATCCCAAA+TGG 0.569683 4.1:+8328826 None:intergenic
TCTCTCTGAAATATGGGCAA+AGG 0.571068 4.1:-8327620 MS.gene70216:CDS
GAGCCCTCGGCTAAAAGGCT+AGG 0.572458 4.1:+8326102 None:intergenic
AGGGGCTCAAGGAATCATCA+TGG 0.573145 4.1:-8328392 MS.gene70216:CDS
AGAGGGAATAGACTTTGCTA+GGG 0.577586 4.1:-8326491 MS.gene70216:CDS
TCTCTGAGTATGCAAGGGTA+GGG 0.583375 4.1:-8323362 MS.gene70216:CDS
GGGGCTCAAGGAATCATCAT+GGG 0.609277 4.1:-8328391 MS.gene70216:intron
AGAGAACTAATCAAACTTGG+AGG 0.614896 4.1:+8323022 None:intergenic
ATCTCACAAAGAGTTTCTCG+TGG 0.622042 4.1:-8324600 MS.gene70216:CDS
GAGATCATCAAAATCATCTG+AGG 0.628890 4.1:+8329006 None:intergenic
ATGTTAGAGACACAAAGCAC+TGG 0.634191 4.1:-8323045 MS.gene70216:CDS
AGCATTCTCTGAGTATGCAA+GGG 0.637209 4.1:-8323367 MS.gene70216:CDS
AAAGGAAACGAACCAATGGT+GGG 0.650141 4.1:+8328980 None:intergenic
ACGTTTCAATATCACTAAAG+GGG 0.663806 4.1:-8323281 MS.gene70216:CDS
GTGGTGGATGCATCAGACTG+AGG 0.692961 4.1:+8326045 None:intergenic
CTGACAAGTTCTTACTACAG+AGG 0.693244 4.1:-8328412 MS.gene70216:CDS
ATGCAGTTTATGACGTAACA+CGG 0.694182 4.1:-8327660 MS.gene70216:intron
GACAAGTTCTTACTACAGAG+GGG 0.732850 4.1:-8328410 MS.gene70216:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATTTTTTTGAG+AGG - chr4.1:8326891-8326910 MS.gene70216:intron 10.0%
!!! TTTTTGAAGTAAAATAAATA+AGG + chr4.1:8326950-8326969 None:intergenic 10.0%
!!! TTTTTTTAATTTTTTTGAGA+GGG - chr4.1:8326892-8326911 MS.gene70216:intron 10.0%
!! AAAAAATTGAATATCATTAG+AGG - chr4.1:8325172-8325191 MS.gene70216:intron 15.0%
!! AAATAAGAACAAAAGAAAAA+TGG + chr4.1:8326639-8326658 None:intergenic 15.0%
!! AGATAGAATTAAATCAATTA+AGG + chr4.1:8323153-8323172 None:intergenic 15.0%
!! ATAATAAGATTTGAACATAT+TGG - chr4.1:8326415-8326434 MS.gene70216:CDS 15.0%
!! ATTTGACATAAAATTCTTAA+AGG + chr4.1:8324579-8324598 None:intergenic 15.0%
!! TAATAATCAATATCATCATT+GGG + chr4.1:8324073-8324092 None:intergenic 15.0%
!! TGTAAAATGTGAATTAATTT+AGG + chr4.1:8324006-8324025 None:intergenic 15.0%
!!! AAATTTATCCATGTATTTTT+TGG - chr4.1:8324657-8324676 MS.gene70216:CDS 15.0%
!!! AGTAAAAAAGAACATTTTTA+AGG - chr4.1:8326030-8326049 MS.gene70216:intron 15.0%
!!! ATCTAAAATCTAAATTGATA+TGG + chr4.1:8327844-8327863 None:intergenic 15.0%
!!! TTATTTTGTAATCTTGTTAT+TGG - chr4.1:8323391-8323410 MS.gene70216:CDS 15.0%
!! AAGTAGAATATCAATCAAAT+AGG + chr4.1:8323625-8323644 None:intergenic 20.0%
!! ACAAACTAAATATTAGAAAC+AGG + chr4.1:8326515-8326534 None:intergenic 20.0%
!! ACAGTAAATAAATGTACTAT+TGG + chr4.1:8323775-8323794 None:intergenic 20.0%
!! ACCAAATATTTCTTTATATG+AGG - chr4.1:8326841-8326860 MS.gene70216:intron 20.0%
!! AGTAGAATATCAATCAAATA+GGG + chr4.1:8323624-8323643 None:intergenic 20.0%
!! ATGTTCAAATTGTTAATGAT+TGG - chr4.1:8323033-8323052 MS.gene70216:CDS 20.0%
!! CTAATAATCAATATCATCAT+TGG + chr4.1:8324074-8324093 None:intergenic 20.0%
!! TAAATAAAACTCCAATCTAA+TGG + chr4.1:8323374-8323393 None:intergenic 20.0%
!! TAAATCAATTAAGGAATGAA+AGG + chr4.1:8323144-8323163 None:intergenic 20.0%
!! TAAATTAAATACCACATGAA+AGG + chr4.1:8325343-8325362 None:intergenic 20.0%
!! TAATTATTGGTAAAAGTTGA+TGG + chr4.1:8323434-8323453 None:intergenic 20.0%
!! TACCAATAATTAATCTTTAG+CGG - chr4.1:8323442-8323461 MS.gene70216:intron 20.0%
!! TATGAACATAAACTTATTGA+TGG + chr4.1:8328667-8328686 None:intergenic 20.0%
!! TGTTCAAATTGTTAATGATT+GGG - chr4.1:8323034-8323053 MS.gene70216:CDS 20.0%
!!! AAAGCATTGAATATTTGATA+AGG - chr4.1:8327175-8327194 MS.gene70216:intron 20.0%
!!! AATTATTTGTTTTCTGAGTA+GGG - chr4.1:8323921-8323940 MS.gene70216:intron 20.0%
!!! AGCAAATATTCATTTACTTT+TGG + chr4.1:8328160-8328179 None:intergenic 20.0%
!!! ATTTAATTTGTGATGAACAA+TGG - chr4.1:8325924-8325943 MS.gene70216:intron 20.0%
!!! GATATTGGTTTTTAGATTAA+AGG - chr4.1:8323551-8323570 MS.gene70216:intron 20.0%
!!! GCAAATATTCATTTACTTTT+GGG + chr4.1:8328159-8328178 None:intergenic 20.0%
!!! TGTAAGAGTGTATTATTTTT+TGG - chr4.1:8328412-8328431 MS.gene70216:CDS 20.0%
! AAAAGAAAAATGGAATGTAC+AGG + chr4.1:8326629-8326648 None:intergenic 25.0%
! AAAAGAATTCTGAATTCTGA+TGG + chr4.1:8327306-8327325 None:intergenic 25.0%
! AACAAAATATAGAGGTAATC+AGG + chr4.1:8324413-8324432 None:intergenic 25.0%
! AATGGACAAGGATTTAAAAA+TGG + chr4.1:8323356-8323375 None:intergenic 25.0%
! ACAAGACATGATATATGAAT+TGG - chr4.1:8327717-8327736 MS.gene70216:intron 25.0%
! ACCAATAATTAATCTTTAGC+GGG - chr4.1:8323443-8323462 MS.gene70216:intron 25.0%
! ATAATGTCAGCTCAAAATTA+AGG + chr4.1:8326867-8326886 None:intergenic 25.0%
! ATATATTCAGTGGATAGAAT+AGG - chr4.1:8323829-8323848 MS.gene70216:intron 25.0%
! ATATCAATCAAATAGGGTAT+TGG + chr4.1:8323618-8323637 None:intergenic 25.0%
! ATGTAGATGTAATATAGTGA+CGG - chr4.1:8326254-8326273 MS.gene70216:intron 25.0%
! ATGTCAAATCCTATAATGTA+AGG + chr4.1:8325531-8325550 None:intergenic 25.0%
! ATGTTAGAAATCCATGAAAA+TGG + chr4.1:8326158-8326177 None:intergenic 25.0%
! GCCTCATATAAAGAAATATT+TGG + chr4.1:8326845-8326864 None:intergenic 25.0%
! GTTCAAATTGTTAATGATTG+GGG - chr4.1:8323035-8323054 MS.gene70216:CDS 25.0%
! GTTTATCTTCAATTTGGTAA+TGG - chr4.1:8327635-8327654 MS.gene70216:CDS 25.0%
! TAAAGGCCAATTGTATATAT+GGG - chr4.1:8323568-8323587 MS.gene70216:intron 25.0%
! TAATAATCTGTAGGATTCAA+TGG - chr4.1:8324239-8324258 MS.gene70216:intron 25.0%
! TAGGTAAATATTTAACCATG+AGG + chr4.1:8323987-8324006 None:intergenic 25.0%
! TATGAAAGATCTGTAAAATG+AGG + chr4.1:8329039-8329058 None:intergenic 25.0%
! TATTGGGAAGACAATTTAAA+AGG + chr4.1:8323601-8323620 None:intergenic 25.0%
! TCAAACATTAATTTAGCAGT+AGG + chr4.1:8328216-8328235 None:intergenic 25.0%
! TCTTTCATCTAATAATCTGT+AGG - chr4.1:8324230-8324249 MS.gene70216:intron 25.0%
! TGATATCATTCATATTGCTT+GGG - chr4.1:8324159-8324178 MS.gene70216:intron 25.0%
! TTAAAGGCCAATTGTATATA+TGG - chr4.1:8323567-8323586 MS.gene70216:intron 25.0%
! TTCCTAAAAGTTATCATTTC+CGG + chr4.1:8325148-8325167 None:intergenic 25.0%
! TTCTATTAAAAATGGGTGTT+TGG + chr4.1:8328133-8328152 None:intergenic 25.0%
! TTGATATCATTCATATTGCT+TGG - chr4.1:8324158-8324177 MS.gene70216:intron 25.0%
! TTGCTTGTTTATCTTCAATT+TGG - chr4.1:8327629-8327648 MS.gene70216:CDS 25.0%
! TTTACTGAGCAATCAATTAA+GGG - chr4.1:8327883-8327902 MS.gene70216:intron 25.0%
!! AATGACATAGATTTTGAACA+AGG + chr4.1:8324687-8324706 None:intergenic 25.0%
!! ATTCAATCGTTAGCAAATTT+TGG - chr4.1:8324746-8324765 MS.gene70216:intron 25.0%
!! CTTTAAACATCAAGTAGTTT+TGG + chr4.1:8323953-8323972 None:intergenic 25.0%
!! GAATAGGTTCATTTTGTATT+TGG - chr4.1:8328596-8328615 MS.gene70216:intron 25.0%
!! TACAAATATTGCAGTCATTT+TGG + chr4.1:8324303-8324322 None:intergenic 25.0%
!! TATAATTAAACCGACTTTAG+AGG - chr4.1:8328458-8328477 MS.gene70216:intron 25.0%
!! TATCAATCAAATAGGGTATT+GGG + chr4.1:8323617-8323636 None:intergenic 25.0%
!! TCTTTTACATATGTAGAAGT+TGG - chr4.1:8325034-8325053 MS.gene70216:intron 25.0%
!! TTTAGATTTTAGATTGCCAT+TGG - chr4.1:8327850-8327869 MS.gene70216:intron 25.0%
!! TTTTTCTTGCCTTACATTAT+AGG - chr4.1:8325519-8325538 MS.gene70216:intron 25.0%
!!! AGTCTTGATTTGTTGAATAA+AGG + chr4.1:8324516-8324535 None:intergenic 25.0%
!!! CTGATTTACTAACCTTATTT+TGG - chr4.1:8325736-8325755 MS.gene70216:intron 25.0%
!!! GAATTATTTGTTTTCTGAGT+AGG - chr4.1:8323920-8323939 MS.gene70216:intron 25.0%
!!! TACAAATCTCTCTGAAATAT+GGG - chr4.1:8324477-8324496 MS.gene70216:intron 25.0%
!!! TCAATTTGGTAATGGATTAT+TGG - chr4.1:8327643-8327662 MS.gene70216:CDS 25.0%
!!! TTACAAATCTCTCTGAAATA+TGG - chr4.1:8324476-8324495 MS.gene70216:intron 25.0%
!!! TTGTTTTTCTAGTTTGCATT+TGG - chr4.1:8324986-8325005 MS.gene70216:intron 25.0%
!!! TTTTGTAATCTTGTTATTGG+TGG - chr4.1:8323394-8323413 MS.gene70216:intron 25.0%
AAAGGCCAATTGTATATATG+GGG - chr4.1:8323569-8323588 MS.gene70216:intron 30.0%
AACAGAGTTGAAGAATAAGA+GGG + chr4.1:8328252-8328271 None:intergenic 30.0%
AAGAATTGAGAGGCAAAAAA+GGG + chr4.1:8323752-8323771 None:intergenic 30.0%
AATGAAAAGGAAACTAGAGA+GGG + chr4.1:8327396-8327415 None:intergenic 30.0%
ACGTTTCAATATCACTAAAG+GGG - chr4.1:8328822-8328841 MS.gene70216:intron 30.0%
ACTAGCAGTAAAACTTAACT+AGG + chr4.1:8328185-8328204 None:intergenic 30.0%
ACTGACATGATTTGAATACA+AGG + chr4.1:8324619-8324638 None:intergenic 30.0%
ACTGGTATGTATGTATGTAT+TGG - chr4.1:8323288-8323307 MS.gene70216:CDS 30.0%
AGACGTTTCAATATCACTAA+AGG - chr4.1:8328820-8328839 MS.gene70216:intron 30.0%
ATATCATGTCTTGTCACAAA+AGG + chr4.1:8327711-8327730 None:intergenic 30.0%
ATTCTCTCTAATGCCAATTT+GGG + chr4.1:8326719-8326738 None:intergenic 30.0%
CAACTTAATTGCATAACAGA+TGG + chr4.1:8324969-8324988 None:intergenic 30.0%
CATACAAATCATGAATTGCA+TGG - chr4.1:8325367-8325386 MS.gene70216:intron 30.0%
CCAATAATTAATCTTTAGCG+GGG - chr4.1:8323444-8323463 MS.gene70216:intron 30.0%
CTAAATATTAGAAACAGGCT+TGG + chr4.1:8326510-8326529 None:intergenic 30.0%
CTACATATTCAAGACAAAAC+AGG + chr4.1:8326240-8326259 None:intergenic 30.0%
CTGGTATGTATGTATGTATT+GGG - chr4.1:8323289-8323308 MS.gene70216:CDS 30.0%
CTTAATTGATTGCTCAGTAA+AGG + chr4.1:8327884-8327903 None:intergenic 30.0%
CTTGTTCATACATTACTTCT+CGG - chr4.1:8328554-8328573 MS.gene70216:intron 30.0%
CTTTACTGAGCAATCAATTA+AGG - chr4.1:8327882-8327901 MS.gene70216:intron 30.0%
GACGTTTCAATATCACTAAA+GGG - chr4.1:8328821-8328840 MS.gene70216:intron 30.0%
GCAATCTGTTTAATGATCTT+TGG - chr4.1:8324329-8324348 MS.gene70216:intron 30.0%
GCATTGAATATTTGATAAGG+AGG - chr4.1:8327178-8327197 MS.gene70216:intron 30.0%
GTAAAAGAAGACAATGAAGA+AGG - chr4.1:8325306-8325325 MS.gene70216:intron 30.0%
GTGAAACGTAAATTCTCTTT+GGG - chr4.1:8325770-8325789 MS.gene70216:intron 30.0%
TAAAAGTTATCATTTCCGGA+GGG + chr4.1:8325144-8325163 None:intergenic 30.0%
TAAACTTTATCATTTCCGGA+GGG + chr4.1:8325239-8325258 None:intergenic 30.0%
TAAATCCTTGTCCATTAGAT+TGG - chr4.1:8323360-8323379 MS.gene70216:CDS 30.0%
TACTACATCTCAATCTTAGA+TGG + chr4.1:8327814-8327833 None:intergenic 30.0%
TAGCACTGCATTCAATAAAT+AGG + chr4.1:8325648-8325667 None:intergenic 30.0%
TCCCTAAACTTTATCATTTC+CGG + chr4.1:8325243-8325262 None:intergenic 30.0%
TCCGGAAATGATAAAGTTTA+GGG - chr4.1:8325239-8325258 MS.gene70216:intron 30.0%
TCTATCCACTGAATATATCA+CGG + chr4.1:8323827-8323846 None:intergenic 30.0%
TCTGTCACCAATTTCATATA+GGG + chr4.1:8328777-8328796 None:intergenic 30.0%
TGAATTCCAAGTTCTCTATA+AGG + chr4.1:8324731-8324750 None:intergenic 30.0%
TGGGCGATTCTATTAAAAAT+GGG + chr4.1:8328140-8328159 None:intergenic 30.0%
TGTGAAACGTAAATTCTCTT+TGG - chr4.1:8325769-8325788 MS.gene70216:intron 30.0%
TGTTGGAAACAAAGTAGATA+AGG - chr4.1:8324549-8324568 MS.gene70216:CDS 30.0%
TTAATTGCATAACAGATGGA+CGG + chr4.1:8324965-8324984 None:intergenic 30.0%
TTATAGGATTTGACATGTGT+TGG - chr4.1:8325535-8325554 MS.gene70216:intron 30.0%
TTCTATAATCCGAGAGATAA+GGG - chr4.1:8327947-8327966 MS.gene70216:intron 30.0%
TTGACACTTCTGCTTATTTA+AGG - chr4.1:8324891-8324910 MS.gene70216:intron 30.0%
TTGGGCGATTCTATTAAAAA+TGG + chr4.1:8328141-8328160 None:intergenic 30.0%
TTGTTCATACATTACTTCTC+GGG - chr4.1:8328555-8328574 MS.gene70216:intron 30.0%
TTGTTGCAAATAACCTACTT+GGG + chr4.1:8326803-8326822 None:intergenic 30.0%
TTTCAATCACCTACAAAAAC+AGG + chr4.1:8328703-8328722 None:intergenic 30.0%
TTTCTATAATCCGAGAGATA+AGG - chr4.1:8327946-8327965 MS.gene70216:intron 30.0%
TTTCTTCCTTATAGAGAACT+TGG - chr4.1:8324722-8324741 MS.gene70216:intron 30.0%
TTTGTTGCAAATAACCTACT+TGG + chr4.1:8326804-8326823 None:intergenic 30.0%
TTTGTTTGTATCCTTTCATG+TGG - chr4.1:8325329-8325348 MS.gene70216:intron 30.0%
! ATGTTTGTGCTTGTATTTTC+AGG - chr4.1:8325564-8325583 MS.gene70216:intron 30.0%
! ATTGGCTTATTTGAGCTTAT+AGG - chr4.1:8327735-8327754 MS.gene70216:intron 30.0%
! CTGTTATCACATTTGTTTCT+AGG - chr4.1:8325455-8325474 MS.gene70216:intron 30.0%
! GGATTTCTAACATAATTTGC+TGG - chr4.1:8326165-8326184 MS.gene70216:intron 30.0%
! TAGGTTCATTTTGTATTTGG+TGG - chr4.1:8328599-8328618 MS.gene70216:intron 30.0%
! TCATAAACTGCATCAGTTTT+GGG + chr4.1:8324436-8324455 None:intergenic 30.0%
! TGTTTTTCACACAAGTTCAA+TGG - chr4.1:8325863-8325882 MS.gene70216:intron 30.0%
!! AGCTTCGATTTTGATAAGAA+TGG + chr4.1:8324113-8324132 None:intergenic 30.0%
!! CTGCTTATTTAAGGTGTTTT+TGG - chr4.1:8324900-8324919 MS.gene70216:intron 30.0%
!! GTTTAATGATCTTTGGAGTT+GGG - chr4.1:8324336-8324355 MS.gene70216:intron 30.0%
!! TGTTTAATGATCTTTGGAGT+TGG - chr4.1:8324335-8324354 MS.gene70216:intron 30.0%
!!! ACTGGGGATTTTTTTTTCTT+TGG - chr4.1:8325956-8325975 MS.gene70216:intron 30.0%
!!! GTTTTGGGAACAAAATATAG+AGG + chr4.1:8324421-8324440 None:intergenic 30.0%
!!! TATCACAGGTGTTGATTTTA+AGG - chr4.1:8323215-8323234 MS.gene70216:intron 30.0%
!!! TTGAGAGGGTTTATTTTGAT+TGG - chr4.1:8326906-8326925 MS.gene70216:intron 30.0%
AAAAGCTTAAGCTTGCCATT+TGG - chr4.1:8323262-8323281 MS.gene70216:intron 35.0%
AAACACTCACACAAGTGTTT+GGG - chr4.1:8328078-8328097 MS.gene70216:intron 35.0%
AAGAATACAGCAATCCAGAT+TGG + chr4.1:8323858-8323877 None:intergenic 35.0%
AAGCAGCATTTCAAGAATCA+CGG - chr4.1:8326109-8326128 MS.gene70216:CDS 35.0%
AAGCAGGAAAAGGAATGAAA+AGG + chr4.1:8327409-8327428 None:intergenic 35.0%
AAGGCAAGCCAAAAAATACA+TGG + chr4.1:8324668-8324687 None:intergenic 35.0%
AAGGCCAATTGTATATATGG+GGG - chr4.1:8323570-8323589 MS.gene70216:intron 35.0%
AATGAAAGGAAACGAACCAA+TGG + chr4.1:8323130-8323149 None:intergenic 35.0%
AATGGAAGATTGAAAATGGG+TGG + chr4.1:8327269-8327288 None:intergenic 35.0%
AATTGATTGCTCAGTAAAGG+TGG + chr4.1:8327881-8327900 None:intergenic 35.0%
ACGAAAAAATGTGGTTGCAA+GGG + chr4.1:8323474-8323493 None:intergenic 35.0%
AGAACCTAACGAAAGGATAT+TGG + chr4.1:8327610-8327629 None:intergenic 35.0%
AGAGAACTAATCAAACTTGG+AGG + chr4.1:8329084-8329103 None:intergenic 35.0%
AGAGTTGTGACAAAGAAAGA+GGG - chr4.1:8325595-8325614 MS.gene70216:intron 35.0%
AGCATGCTTATCTGCATATA+AGG + chr4.1:8328971-8328990 None:intergenic 35.0%
AGGAAGTGAAGTGAAAAGTA+TGG - chr4.1:8327217-8327236 MS.gene70216:intron 35.0%
ATACATACCAGTATCCCAAA+TGG + chr4.1:8323280-8323299 None:intergenic 35.0%
ATAGACTTTGCTAGGGAATA+TGG - chr4.1:8325619-8325638 MS.gene70216:intron 35.0%
ATCATAAAAAAGCTCTGCAC+TGG + chr4.1:8326594-8326613 None:intergenic 35.0%
ATGAAAAGGAAACTAGAGAG+GGG + chr4.1:8327395-8327414 None:intergenic 35.0%
ATGCAGTTTATGACGTAACA+CGG - chr4.1:8324443-8324462 MS.gene70216:intron 35.0%
CAAAGTTCATGCCAAGAATT+GGG - chr4.1:8328342-8328361 MS.gene70216:intron 35.0%
CAACAGAGTTGAAGAATAAG+AGG + chr4.1:8328253-8328272 None:intergenic 35.0%
CACGCATCAACTTAAAGAAA+AGG + chr4.1:8324368-8324387 None:intergenic 35.0%
CACTTGGAACAATGTGATAT+TGG - chr4.1:8323536-8323555 MS.gene70216:intron 35.0%
CCCCGCTAAAGATTAATTAT+TGG + chr4.1:8323447-8323466 None:intergenic 35.0%
CGAGAAGTAATGTATGAACA+AGG + chr4.1:8328556-8328575 None:intergenic 35.0%
CGCAATGGAAGATTGAAAAT+GGG + chr4.1:8327272-8327291 None:intergenic 35.0%
CTAAAAGTTATCATTTCCGG+AGG + chr4.1:8325145-8325164 None:intergenic 35.0%
CTAAACTTTATCATTTCCGG+AGG + chr4.1:8325240-8325259 None:intergenic 35.0%
CTAACAAAGAAAGTCCAACT+TGG + chr4.1:8324265-8324284 None:intergenic 35.0%
CTCCGGAAATGATAAAGTTT+AGG - chr4.1:8325238-8325257 MS.gene70216:intron 35.0%
CTCTGTCACCAATTTCATAT+AGG + chr4.1:8328778-8328797 None:intergenic 35.0%
CTCTTATTCTTCAACTCTGT+TGG - chr4.1:8328251-8328270 MS.gene70216:intron 35.0%
CTCTTGTCATCTTAATCTGT+TGG - chr4.1:8326444-8326463 MS.gene70216:CDS 35.0%
CTGCAATCATAGGCTATTTA+AGG + chr4.1:8327977-8327996 None:intergenic 35.0%
CTTAAATAGCCTATGATTGC+AGG - chr4.1:8327975-8327994 MS.gene70216:intron 35.0%
GAACCTAACGAAAGGATATT+GGG + chr4.1:8327609-8327628 None:intergenic 35.0%
GAAGAATTGAGAGGCAAAAA+AGG + chr4.1:8323753-8323772 None:intergenic 35.0%
GAAGAGTTGCAATTGTAAAC+TGG + chr4.1:8329011-8329030 None:intergenic 35.0%
GAATGAAAAGGAAACTAGAG+AGG + chr4.1:8327397-8327416 None:intergenic 35.0%
GACTTTCTTTGTTAGTGATG+GGG - chr4.1:8324270-8324289 MS.gene70216:intron 35.0%
GAGATCATCAAAATCATCTG+AGG + chr4.1:8323100-8323119 None:intergenic 35.0%
GAGGTAGAAAGCAAAATATC+AGG - chr4.1:8327197-8327216 MS.gene70216:intron 35.0%
GATTCTCTCTAATGCCAATT+TGG + chr4.1:8326720-8326739 None:intergenic 35.0%
GCAATCAATTAAGGGAAGTT+TGG - chr4.1:8327891-8327910 MS.gene70216:intron 35.0%
GCTATGAAATTGAACTTACC+TGG + chr4.1:8328851-8328870 None:intergenic 35.0%
GGACTTTCTTTGTTAGTGAT+GGG - chr4.1:8324269-8324288 MS.gene70216:intron 35.0%
GTACTATTGGAAGAATTGAG+AGG + chr4.1:8323762-8323781 None:intergenic 35.0%
GTATGTATGTATTGGGATAC+TGG - chr4.1:8323296-8323315 MS.gene70216:CDS 35.0%
GTCAAATATGTCACGATAGA+GGG - chr4.1:8323237-8323256 MS.gene70216:intron 35.0%
GTTATGCCATGAAATAGATG+AGG + chr4.1:8328630-8328649 None:intergenic 35.0%
GTTCAATGGCTGACAATAAA+TGG - chr4.1:8325877-8325896 MS.gene70216:intron 35.0%
TAATTGCATAACAGATGGAC+GGG + chr4.1:8324964-8324983 None:intergenic 35.0%
TAGAGTTGTGACAAAGAAAG+AGG - chr4.1:8325594-8325613 MS.gene70216:intron 35.0%
TCAAAGTTCATGCCAAGAAT+TGG - chr4.1:8328341-8328360 MS.gene70216:intron 35.0%
TCGCAATGGAAGATTGAAAA+TGG + chr4.1:8327273-8327292 None:intergenic 35.0%
TCTAGTAAAGTCCCAATTCT+TGG + chr4.1:8328356-8328375 None:intergenic 35.0%
TGAAATGAGACCATGCTTAA+GGG - chr4.1:8323498-8323517 MS.gene70216:intron 35.0%
TGACAAGTTCTTACTACAGA+GGG - chr4.1:8323692-8323711 MS.gene70216:intron 35.0%
TGAGAACTTTCCAAATCACA+AGG + chr4.1:8328484-8328503 None:intergenic 35.0%
TGCAGAGAACTAATCAAACT+TGG + chr4.1:8329087-8329106 None:intergenic 35.0%
TGGACTTTCTTTGTTAGTGA+TGG - chr4.1:8324268-8324287 MS.gene70216:intron 35.0%
TGTAAAACTGAGAGTCCAAA+TGG + chr4.1:8325396-8325415 None:intergenic 35.0%
TTACCCAATATCCTTTCGTT+AGG - chr4.1:8327603-8327622 MS.gene70216:CDS 35.0%
TTCAAGACAAAACAGGAAGT+TGG + chr4.1:8326233-8326252 None:intergenic 35.0%
TTGAAATGAGACCATGCTTA+AGG - chr4.1:8323497-8323516 MS.gene70216:intron 35.0%
TTGTTAATGATTGGGGATTC+TGG - chr4.1:8323042-8323061 MS.gene70216:CDS 35.0%
TTTCAAGCCACGAAAAAATG+TGG + chr4.1:8323483-8323502 None:intergenic 35.0%
TTTCCACCTTCTAATATGCA+TGG + chr4.1:8325801-8325820 None:intergenic 35.0%
! AAACTCCAATCTAATGGACA+AGG + chr4.1:8323368-8323387 None:intergenic 35.0%
! AAAGCTTAAGCTTGCCATTT+GGG - chr4.1:8323263-8323282 MS.gene70216:intron 35.0%
! AGTGAAGTGAAAAGTATGGT+AGG - chr4.1:8327221-8327240 MS.gene70216:intron 35.0%
! CTAACAAATCAGTTGTTTCC+AGG + chr4.1:8324202-8324221 None:intergenic 35.0%
! CTCCGGAAATGATAACTTTT+AGG - chr4.1:8325143-8325162 MS.gene70216:intron 35.0%
! GCGTGTTGAAAACTTAGTTT+TGG - chr4.1:8324383-8324402 MS.gene70216:intron 35.0%
! GTCATAAACTGCATCAGTTT+TGG + chr4.1:8324437-8324456 None:intergenic 35.0%
! GTTTTACCAAATAATGCAGC+TGG - chr4.1:8323649-8323668 MS.gene70216:intron 35.0%
! TTCATTCCTTTTCCTGCTTT+TGG - chr4.1:8327410-8327429 MS.gene70216:intron 35.0%
!! AATATTGCAGTCATTTTGGC+AGG + chr4.1:8324299-8324318 None:intergenic 35.0%
!! ATATTGCAGTCATTTTGGCA+GGG + chr4.1:8324298-8324317 None:intergenic 35.0%
!! TTGTGCTTGTATTTTCAGGA+GGG - chr4.1:8325568-8325587 MS.gene70216:intron 35.0%
!! TTGTTTTGTGCTTTTGCTTC+TGG - chr4.1:8325096-8325115 MS.gene70216:intron 35.0%
!! TTTGTGCTTGTATTTTCAGG+AGG - chr4.1:8325567-8325586 MS.gene70216:intron 35.0%
!!! AAAGCTTTTTTGTTGCCTCA+TGG - chr4.1:8323969-8323988 MS.gene70216:intron 35.0%
!!! AACATGCTACCTGTTTTTGT+AGG - chr4.1:8328691-8328710 MS.gene70216:intron 35.0%
!!! CTAACCTTATTTTGGTCAGT+AGG - chr4.1:8325744-8325763 MS.gene70216:intron 35.0%
!!! CTTTGAAGAGCTTGTTTTGA+AGG - chr4.1:8325693-8325712 MS.gene70216:intron 35.0%
!!! TTTTTTCTTTGGTTGCATGC+AGG - chr4.1:8325967-8325986 MS.gene70216:intron 35.0%
AAAGGAAACGAACCAATGGT+GGG + chr4.1:8323126-8323145 None:intergenic 40.0%
AAGAGGGAATAGACTTTGCT+AGG - chr4.1:8325611-8325630 MS.gene70216:intron 40.0%
AAGATGAGCCTGTGCAATTT+CGG - chr4.1:8325832-8325851 MS.gene70216:intron 40.0%
ACAAGCAAGAACCTAACGAA+AGG + chr4.1:8327617-8327636 None:intergenic 40.0%
AGAAGAAGCAATAGCAGAGA+TGG - chr4.1:8328796-8328815 MS.gene70216:intron 40.0%
AGAGGCAAAAAAGGGAGAAT+AGG + chr4.1:8323744-8323763 None:intergenic 40.0%
AGAGGGAATAGACTTTGCTA+GGG - chr4.1:8325612-8325631 MS.gene70216:intron 40.0%
AGCATTCTCTGAGTATGCAA+GGG - chr4.1:8328736-8328755 MS.gene70216:intron 40.0%
AGTAAAGGTGGAAAAGCCAA+TGG + chr4.1:8327869-8327888 None:intergenic 40.0%
ATCACGGTCATCAATACTTG+AGG + chr4.1:8323811-8323830 None:intergenic 40.0%
ATCTCACAAAGAGTTTCTCG+TGG - chr4.1:8327503-8327522 MS.gene70216:intron 40.0%
ATGTTAGAGACACAAAGCAC+TGG - chr4.1:8329058-8329077 MS.gene70216:CDS 40.0%
CAAACACTCACACAAGTGTT+TGG - chr4.1:8328077-8328096 MS.gene70216:intron 40.0%
CAAACACTTGTGTGAGTGTT+TGG + chr4.1:8328079-8328098 None:intergenic 40.0%
CAACACCTGTGATAGATAGT+AGG + chr4.1:8323209-8323228 None:intergenic 40.0%
CAACCATGCATATTAGAAGG+TGG - chr4.1:8325795-8325814 MS.gene70216:intron 40.0%
CACACAATCACTTGTGAGAA+GGG - chr4.1:8326548-8326567 MS.gene70216:intron 40.0%
CACACCTACTGACCAAAATA+AGG + chr4.1:8325751-8325770 None:intergenic 40.0%
CACATTGTTCCAAGTGAAAG+TGG + chr4.1:8323532-8323551 None:intergenic 40.0%
CACGAAAAAATGTGGTTGCA+AGG + chr4.1:8323475-8323494 None:intergenic 40.0%
CATCTTTACAGGTCTTCACA+TGG + chr4.1:8326332-8326351 None:intergenic 40.0%
CGATCTGCGATTTACTTAGA+AGG + chr4.1:8324792-8324811 None:intergenic 40.0%
CTCTCCCCCATATATACAAT+TGG + chr4.1:8323577-8323596 None:intergenic 40.0%
CTCTTTCAGAACGAGTTACT+GGG + chr4.1:8327469-8327488 None:intergenic 40.0%
CTGACAAGTTCTTACTACAG+AGG - chr4.1:8323691-8323710 MS.gene70216:intron 40.0%
GAAATAGCTTCAGCAACAAC+CGG + chr4.1:8326083-8326102 None:intergenic 40.0%
GAAGTTGGAACCTAGAAAAC+TGG + chr4.1:8326218-8326237 None:intergenic 40.0%
GAATATCAGCCAGTATATCC+TGG - chr4.1:8324181-8324200 MS.gene70216:intron 40.0%
GAATGTACAGGCTTCAAACA+CGG + chr4.1:8326617-8326636 None:intergenic 40.0%
GACAAGTTCTTACTACAGAG+GGG - chr4.1:8323693-8323712 MS.gene70216:intron 40.0%
GATAGAATAGGATGCCAATC+TGG - chr4.1:8323841-8323860 MS.gene70216:intron 40.0%
GATCCAAATCCACTTTCACT+TGG - chr4.1:8323520-8323539 MS.gene70216:intron 40.0%
GATGACCGTGATATATTCAG+TGG - chr4.1:8323819-8323838 MS.gene70216:intron 40.0%
GCACTAGCCCTATATGAAAT+TGG - chr4.1:8328767-8328786 MS.gene70216:intron 40.0%
GGAACCTAGAAAACTGGAAA+TGG + chr4.1:8326212-8326231 None:intergenic 40.0%
GGTCAAATATGTCACGATAG+AGG - chr4.1:8323236-8323255 MS.gene70216:intron 40.0%
GTGCAACCATGCATATTAGA+AGG - chr4.1:8325792-8325811 MS.gene70216:intron 40.0%
TAAGGCTTACCCTTATCTCT+CGG + chr4.1:8327959-8327978 None:intergenic 40.0%
TAGAGAGGGGAATAGAGAAA+AGG + chr4.1:8327382-8327401 None:intergenic 40.0%
TAGCATTCTCTGAGTATGCA+AGG - chr4.1:8328735-8328754 MS.gene70216:intron 40.0%
TCACACAATCACTTGTGAGA+AGG - chr4.1:8326547-8326566 MS.gene70216:intron 40.0%
TCTAAGTAAATCGCAGATCG+CGG - chr4.1:8324792-8324811 MS.gene70216:intron 40.0%
TCTCTAATGCCAATTTGGGT+GGG + chr4.1:8326715-8326734 None:intergenic 40.0%
TCTCTTTCAGAACGAGTTAC+TGG + chr4.1:8327470-8327489 None:intergenic 40.0%
TGAATTGCATGGACTCCATT+TGG - chr4.1:8325378-8325397 MS.gene70216:intron 40.0%
TTGCATACTCAGAGAATGCT+AGG + chr4.1:8328736-8328755 None:intergenic 40.0%
TTGTGATGAACAATGGCTGA+TGG - chr4.1:8325931-8325950 MS.gene70216:intron 40.0%
TTTAGCCACATGAAGTTGCA+AGG + chr4.1:8328527-8328546 None:intergenic 40.0%
! ACTTTAGAGGCCTTGTGATT+TGG - chr4.1:8328471-8328490 MS.gene70216:intron 40.0%
! CAGTTGTTTCCAGGATATAC+TGG + chr4.1:8324193-8324212 None:intergenic 40.0%
! CGCTCTTCAATACTTTTCTC+AGG - chr4.1:8327580-8327599 MS.gene70216:CDS 40.0%
! CTCTGTTGGTTGTTTATCTG+AGG - chr4.1:8328265-8328284 MS.gene70216:intron 40.0%
! GAAGCCATTTCCAGTTTTCT+AGG - chr4.1:8326205-8326224 MS.gene70216:intron 40.0%
! GTGATTTGGAAAGTTCTCAG+AGG - chr4.1:8328485-8328504 MS.gene70216:intron 40.0%
! GTTCCAAGTGAAAGTGGATT+TGG + chr4.1:8323526-8323545 None:intergenic 40.0%
! TTGTTTTCTGAGTAGGGCTA+AGG - chr4.1:8323927-8323946 MS.gene70216:intron 40.0%
!! AATCACAAGGCCTCTAAAGT+CGG + chr4.1:8328471-8328490 None:intergenic 40.0%
!! ATATCACTAAAGGGGTATCC+AGG - chr4.1:8328830-8328849 MS.gene70216:intron 40.0%
!! GGAAGAAAACTTTAAAGCGC+TGG + chr4.1:8324710-8324729 None:intergenic 40.0%
!! TCATTTTTCTGACCTCTGCT+GGG - chr4.1:8324035-8324054 MS.gene70216:intron 40.0%
!! TCTCTCTGAAATATGGGCAA+AGG - chr4.1:8324483-8324502 MS.gene70216:intron 40.0%
!! TTTAGAGAGTACTGCAGAGA+AGG - chr4.1:8324853-8324872 MS.gene70216:intron 40.0%
!!! CTTGCAACCACATTTTTTCG+TGG - chr4.1:8323473-8323492 MS.gene70216:intron 40.0%
AAACTCCTGCAGAAACATGC+TGG + chr4.1:8325015-8325034 None:intergenic 45.0%
AATCACGGTCTCCAAGAGAA+GGG - chr4.1:8326124-8326143 MS.gene70216:intron 45.0%
ACCAAATAATGCAGCTGGTC+AGG - chr4.1:8323654-8323673 MS.gene70216:intron 45.0%
AGATGAGCCTGTGCAATTTC+GGG - chr4.1:8325833-8325852 MS.gene70216:intron 45.0%
AGCATGATTGCTTATCCCTC+CGG - chr4.1:8325126-8325145 MS.gene70216:intron 45.0%
ATCCACCTTGCAACTTCATG+TGG - chr4.1:8328519-8328538 MS.gene70216:intron 45.0%
ATGATTGGGGATTCTGGTGT+TGG - chr4.1:8323048-8323067 MS.gene70216:CDS 45.0%
CACTCAGAGCACATCTTTAC+AGG + chr4.1:8326343-8326362 None:intergenic 45.0%
CCTTCACCAAAAGCAGGAAA+AGG + chr4.1:8327419-8327438 None:intergenic 45.0%
CGAAATGAGTGACGTCGAAT+AGG - chr4.1:8328580-8328599 MS.gene70216:intron 45.0%
CGTCTCCTACTATCTATCAC+AGG - chr4.1:8323201-8323220 MS.gene70216:intron 45.0%
CTAAACTAGCCCACCCAAAT+TGG - chr4.1:8326703-8326722 MS.gene70216:intron 45.0%
CTCTCTAATGCCAATTTGGG+TGG + chr4.1:8326716-8326735 None:intergenic 45.0%
GAAAGGAAACGAACCAATGG+TGG + chr4.1:8323127-8323146 None:intergenic 45.0%
GACTGCATGAAGATGCTTGT+TGG - chr4.1:8324532-8324551 MS.gene70216:CDS 45.0%
GAGGCAAAGATGTCACACAA+TGG - chr4.1:8328284-8328303 MS.gene70216:intron 45.0%
GCTCGACCTCATCTATTTCA+TGG - chr4.1:8328621-8328640 MS.gene70216:intron 45.0%
GGATTTGGATCCCTTAAGCA+TGG + chr4.1:8323511-8323530 None:intergenic 45.0%
GTAGGATTCAATGGCCAAGT+TGG - chr4.1:8324248-8324267 MS.gene70216:intron 45.0%
TCCTGACCAGCTGCATTATT+TGG + chr4.1:8323658-8323677 None:intergenic 45.0%
TCTCTGAGTATGCAAGGGTA+GGG - chr4.1:8328741-8328760 MS.gene70216:intron 45.0%
TTCTCTGAGTATGCAAGGGT+AGG - chr4.1:8328740-8328759 MS.gene70216:intron 45.0%
TTTCATGTAAGCTCCCCCAA+TGG + chr4.1:8328001-8328020 None:intergenic 45.0%
! AACAATGGCTGATGGTGACT+GGG - chr4.1:8325939-8325958 MS.gene70216:intron 45.0%
! AAGCTTGCCATTTGGGATAC+TGG - chr4.1:8323270-8323289 MS.gene70216:intron 45.0%
! GGTGTTGAGTTGTTGGAGAA+AGG - chr4.1:8327524-8327543 MS.gene70216:intron 45.0%
! TCAAAGAGGAGCACACTTTC+AGG - chr4.1:8326752-8326771 MS.gene70216:intron 45.0%
! TGAAAGTGTGCTCCTCTTTG+AGG + chr4.1:8326753-8326772 None:intergenic 45.0%
! TTCTCGTGGTGTTGAGTTGT+TGG - chr4.1:8327517-8327536 MS.gene70216:intron 45.0%
! TTTTACTCCCTTAGAGCCCT+CGG + chr4.1:8326017-8326036 None:intergenic 45.0%
!! ATAACCTACTTGGGTTGACC+TGG + chr4.1:8326794-8326813 None:intergenic 45.0%
!! CCTTTTCCTGCTTTTGGTGA+AGG - chr4.1:8327416-8327435 MS.gene70216:intron 45.0%
!! GGGCATTGCATCCATTTTCA+TGG - chr4.1:8326144-8326163 MS.gene70216:intron 45.0%
!! TGACCTGGTGGTATTGACTT+GGG + chr4.1:8326779-8326798 None:intergenic 45.0%
!! TTGACCTGGTGGTATTGACT+TGG + chr4.1:8326780-8326799 None:intergenic 45.0%
!!! GAGGAAAGTGCTTTTGCTTC+TGG - chr4.1:8325191-8325210 MS.gene70216:intron 45.0%
!!! GTCATTTTTCTGACCTCTGC+TGG - chr4.1:8324034-8324053 MS.gene70216:intron 45.0%
!! TATTTGTATATAAATAAATA+AGG + chr4.1:8326979-8326998 None:intergenic 5.0%
!!! ATATTTTTTATGTATTTTTT+AGG + chr4.1:8327012-8327031 None:intergenic 5.0%
AGCCACATGAAGTTGCAAGG+TGG + chr4.1:8328524-8328543 None:intergenic 50.0%
AGCCTATGATTGCAGGCCAT+TGG - chr4.1:8327982-8328001 MS.gene70216:intron 50.0%
AGCCTGTGCAATTTCGGGAA+AGG - chr4.1:8325838-8325857 MS.gene70216:intron 50.0%
AGGGGCTCAAGGAATCATCA+TGG - chr4.1:8323711-8323730 MS.gene70216:intron 50.0%
ATAGCTTCAGCAACAACCGG+TGG + chr4.1:8326080-8326099 None:intergenic 50.0%
CCTATGATTGCAGGCCATTG+GGG - chr4.1:8327984-8328003 MS.gene70216:intron 50.0%
CTATGATTGCAGGCCATTGG+GGG - chr4.1:8327985-8328004 MS.gene70216:intron 50.0%
CTCCTTTCCCGAAATTGCAC+AGG + chr4.1:8325843-8325862 None:intergenic 50.0%
CTGTCACCTTCACCAAAAGC+AGG + chr4.1:8327425-8327444 None:intergenic 50.0%
GAAGTTGCAAGGTGGATGAG+TGG + chr4.1:8328516-8328535 None:intergenic 50.0%
GAATCACGGTCTCCAAGAGA+AGG - chr4.1:8326123-8326142 MS.gene70216:intron 50.0%
GATGATCTCTCTCCCACCAT+TGG - chr4.1:8323111-8323130 MS.gene70216:CDS 50.0%
GCCTATGATTGCAGGCCATT+GGG - chr4.1:8327983-8328002 MS.gene70216:intron 50.0%
GGAGAAAGGTAGAGAGTTGC+AGG - chr4.1:8327538-8327557 MS.gene70216:intron 50.0%
GGGGCTCAAGGAATCATCAT+GGG - chr4.1:8323712-8323731 MS.gene70216:intron 50.0%
TCAGCAAACATTCCCAGCAG+AGG + chr4.1:8324050-8324069 None:intergenic 50.0%
TCGAAGCTGAGACCTCAAAG+AGG - chr4.1:8326738-8326757 MS.gene70216:intron 50.0%
TCGCAGATCGCGGAAAATAG+CGG - chr4.1:8324802-8324821 MS.gene70216:intron 50.0%
TCTTACTACAGAGGGGCTCA+AGG - chr4.1:8323700-8323719 MS.gene70216:intron 50.0%
TGGATGCAATGCCCTTCTCT+TGG + chr4.1:8326138-8326157 None:intergenic 50.0%
! ACAATGGCTGATGGTGACTG+GGG - chr4.1:8325940-8325959 MS.gene70216:intron 50.0%
! CAGGCTCTTGGTGACTTCAA+TGG - chr4.1:8327557-8327576 MS.gene70216:CDS 50.0%
! GAACAATGGCTGATGGTGAC+TGG - chr4.1:8325938-8325957 MS.gene70216:intron 50.0%
! GGTTACCAGCATGTTTCTGC+AGG - chr4.1:8325007-8325026 MS.gene70216:intron 50.0%
!! ACACCTAGCCTTTTAGCCGA+GGG - chr4.1:8325998-8326017 MS.gene70216:intron 50.0%
!! AGAGAGTACTGCAGAGAAGG+AGG - chr4.1:8324856-8324875 MS.gene70216:intron 50.0%
!! CTTTTAGCCGAGGGCTCTAA+GGG - chr4.1:8326007-8326026 MS.gene70216:intron 50.0%
!! GAGAGTACTGCAGAGAAGGA+GGG - chr4.1:8324857-8324876 MS.gene70216:intron 50.0%
!! TACACCTAGCCTTTTAGCCG+AGG - chr4.1:8325997-8326016 MS.gene70216:intron 50.0%
ACCACCAGGTCAACCCAAGT+AGG - chr4.1:8326787-8326806 MS.gene70216:intron 55.0%
CAGTCTGATGCATCCACCAC+CGG - chr4.1:8326061-8326080 MS.gene70216:CDS 55.0%
CCCCAATGGCCTGCAATCAT+AGG + chr4.1:8327987-8328006 None:intergenic 55.0%
CCTTAGAGCCCTCGGCTAAA+AGG + chr4.1:8326009-8326028 None:intergenic 55.0%
GGTAGAGAGTTGCAGGCTCT+TGG - chr4.1:8327545-8327564 MS.gene70216:intron 55.0%
GGTCCCAAGTCAATACCACC+AGG - chr4.1:8326773-8326792 MS.gene70216:intron 55.0%
TACTGCAGAGAAGGAGGGTG+AGG - chr4.1:8324862-8324881 MS.gene70216:intron 55.0%
! CCTTTTAGCCGAGGGCTCTA+AGG - chr4.1:8326006-8326025 MS.gene70216:intron 55.0%
!! ACCTACTTGGGTTGACCTGG+TGG + chr4.1:8326791-8326810 None:intergenic 55.0%
!! GTGGTGGATGCATCAGACTG+AGG + chr4.1:8326061-8326080 None:intergenic 55.0%
GAGCCCTCGGCTAAAAGGCT+AGG + chr4.1:8326004-8326023 None:intergenic 60.0%
GCTTCAGCAACAACCGGTGG+TGG + chr4.1:8326077-8326096 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 8322997 8329128 8322997 ID=MS.gene70216
chr4.1 mRNA 8322997 8329128 8322997 ID=MS.gene70216.t1;Parent=MS.gene70216
chr4.1 exon 8328993 8329128 8328993 ID=MS.gene70216.t1.exon1;Parent=MS.gene70216.t1
chr4.1 CDS 8328993 8329128 8328993 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8328834 8328902 8328834 ID=MS.gene70216.t1.exon2;Parent=MS.gene70216.t1
chr4.1 CDS 8328834 8328902 8328834 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8328392 8328457 8328392 ID=MS.gene70216.t1.exon3;Parent=MS.gene70216.t1
chr4.1 CDS 8328392 8328457 8328392 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8327555 8327676 8327555 ID=MS.gene70216.t1.exon4;Parent=MS.gene70216.t1
chr4.1 CDS 8327555 8327676 8327555 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8326411 8326539 8326411 ID=MS.gene70216.t1.exon5;Parent=MS.gene70216.t1
chr4.1 CDS 8326411 8326539 8326411 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8326043 8326136 8326043 ID=MS.gene70216.t1.exon6;Parent=MS.gene70216.t1
chr4.1 CDS 8326043 8326136 8326043 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8324524 8324687 8324524 ID=MS.gene70216.t1.exon7;Parent=MS.gene70216.t1
chr4.1 CDS 8324524 8324687 8324524 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8323274 8323412 8323274 ID=MS.gene70216.t1.exon8;Parent=MS.gene70216.t1
chr4.1 CDS 8323274 8323412 8323274 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
chr4.1 exon 8322997 8323181 8322997 ID=MS.gene70216.t1.exon9;Parent=MS.gene70216.t1
chr4.1 CDS 8322997 8323181 8322997 ID=cds.MS.gene70216.t1;Parent=MS.gene70216.t1
Gene Sequence

>MS.gene70216

ATGGATTCGAGTTCAGGGCAGCAAGAATTCGATTATATGTTCAAATTGTTAATGATTGGGGATTCTGGTGTTGGCAAAAGTAGTCTTCTTCTCAGATTCACCTCAGATGATTTTGATGATCTCTCTCCCACCATTGGTTCGTTTCCTTTCATTCCTTAATTGATTTAATTCTATCTATATGCACTCTGTGATCTTCTCTTCATGCGTCTCCTACTATCTATCACAGGTGTTGATTTTAAGGTCAAATATGTCACGATAGAGGGTAAAAAGCTTAAGCTTGCCATTTGGGATACTGGTATGTATGTATGTATTGGGATACTGGTAATTATTATTCACTTTTCATTTTTATTTTTATACCATTTTTAAATCCTTGTCCATTAGATTGGAGTTTTATTTATTTTGTAATCTTGTTATTGGTGGTGCTCAGTATGCATCCATCAACTTTTACCAATAATTAATCTTTAGCGGGGTCTTCCCTTGCAACCACATTTTTTCGTGGCTTGAAATGAGACCATGCTTAAGGGATCCAAATCCACTTTCACTTGGAACAATGTGATATTGGTTTTTAGATTAAAGGCCAATTGTATATATGGGGGAGAGACCTTTTAAATTGTCTTCCCAATACCCTATTTGATTGATATTCTACTTTTTTGTTTTACCAAATAATGCAGCTGGTCAGGAGAGATTTAGAACACTGACAAGTTCTTACTACAGAGGGGCTCAAGGAATCATCATGGGCAAGTTCCTATTCTCCCTTTTTTGCCTCTCAATTCTTCCAATAGTACATTTATTTACTGTGTTATGTGAAATGCCTCAAGTATTGATGACCGTGATATATTCAGTGGATAGAATAGGATGCCAATCTGGATTGCTGTATTCTTGTTAAGATTGCACTACTTAAGATATATTCTGTGATTTGCTTTGAATTATTTGTTTTCTGAGTAGGGCTAAGGCCAAAACTACTTGATGTTTAAAGCTTTTTTGTTGCCTCATGGTTAAATATTTACCTAAATTAATTCACATTTTACATTTTTTAAGTCATTTTTCTGACCTCTGCTGGGAATGTTTGCTGACCCAATGATGATATTGATTATTAGAATACTACTTCTATATCCATTCTTATCAAAATCGAAGCTTTAATGATTTAGATTCTCGTGAAAGTTGATATCATTCATATTGCTTGGGAATATCAGCCAGTATATCCTGGAAACAACTGATTTGTTAGTGAATTGATCTTTCATCTAATAATCTGTAGGATTCAATGGCCAAGTTGGACTTTCTTTGTTAGTGATGGGGTTCCCTGCCAAAATGACTGCAATATTTGTATTAGATGCAATCTGTTTAATGATCTTTGGAGTTGGGAGATGTCCTTTTCTTTAAGTTGATGCGTGTTGAAAACTTAGTTTTGGATTACCTGATTACCTCTATATTTTGTTCCCAAAACTGATGCAGTTTATGACGTAACACGGCGAGAAACATTTACAAATCTCTCTGAAATATGGGCAAAGGAAATAGACCTTTATTCAACAAATCAAGACTGCATGAAGATGCTTGTTGGAAACAAAGTAGATAAGGTATTCCTTTAAGAATTTTATGTCAAATGCTATCTTGTAATATTGCCTTGTATTCAAATCATGTCAGTGAATATGTCTGAGTACAAAAATTTATCCATGTATTTTTTGGCTTGCCTTGTTCAAAATCTATGTCATTCCAGCGCTTTAAAGTTTTCTTCCTTATAGAGAACTTGGAATTCAATCGTTAGCAAATTTTGGTTAGATCAATAGTTTAAAATCCTTCTAAGTAAATCGCAGATCGCGGAAAATAGCGGTTTGTTCAGACAATTTATGTATTTTCATTTTAGAGAGTACTGCAGAGAAGGAGGGTGAGGCAGTTTTTGACACTTCTGCTTATTTAAGGTGTTTTTGGATGAAGTATAACACTGTAGTTTTTATTAGAAGTTTCTTCCCGTCCATCTGTTATGCAATTAAGTTGTTTTTCTAGTTTGCATTTGGTTACCAGCATGTTTCTGCAGGAGTTTCTTTTACATATGTAGAAGTTGGAGAGCTCGTTTGATCTTATGTACTTGTCTTTTCTTTCTTTTGTTTTGTGCTTTTGCTTCTGGTTCTTCTAGCATGATTGCTTATCCCTCCGGAAATGATAACTTTTAGGAAAAAAAAAAAATTGAATATCATTAGAGGAAAGTGCTTTTGCTTCTGGTTCTTCTAGCATGATTGCTTATCCCTCCGGAAATGATAAAGTTTAGGGAAAAAAAATTGAATATCATTAGAGGAAAGCGTATTAAACACTAAGTAAAAGAAGACAATGAAGAAGGTTTGTTTGTATCCTTTCATGTGGTATTTAATTTAAGTACATACAAATCATGAATTGCATGGACTCCATTTGGACTCTCAGTTTTACAATTCTAGCTTATATTGTTGAATGAGTCGAGTCAGCTGCACTGTTATCACATTTGTTTCTAGGTCTGACTTCTGCATTATATCAGAGCTTATTGCTGAAAGTTTTTTTTCTTGCCTTACATTATAGGATTTGACATGTGTTGGTTATATATGTTTGTGCTTGTATTTTCAGGAGGGTGATAGAGTTGTGACAAAGAAAGAGGGAATAGACTTTGCTAGGGAATATGGTTGCCTATTTATTGAATGCAGTGCTAAAACTCGAGTAAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGGTACATTAACTGACATACATGCTGATTTACTAACCTTATTTTGGTCAGTAGGTGTGTGAAACGTAAATTCTCTTTGGGTGCAACCATGCATATTAGAAGGTGGAAATGTTTAATTGAAAGATGAGCCTGTGCAATTTCGGGAAAGGAGTGTTTTTCACACAAGTTCAATGGCTGACAATAAATGGATTGAGATACTAGTTTAATGCTTTATTTAATTTGTGATGAACAATGGCTGATGGTGACTGGGGATTTTTTTTTCTTTGGTTGCATGCAGGTTCTTGATACACCTAGCCTTTTAGCCGAGGGCTCTAAGGGAGTAAAAAAGAACATTTTTAAGGACAAACCTCAGTCTGATGCATCCACCACCGGTTGTTGCTGAAGCTATTTCACTCAGAAGCAGCATTTCAAGAATCACGGTCTCCAAGAGAAGGGCATTGCATCCATTTTCATGGATTTCTAACATAATTTGCTGGTTATTTTAACATATGCAGAAGCCATTTCCAGTTTTCTAGGTTCCAACTTCCTGTTTTGTCTTGAATATGTAGATGTAATATAGTGACGGTCGTCTGCAATTTCTTGAAACTTCTTGTTTTTCTTTTAGTCACACATTAATTCCATGTGAAGACCTGTAAAGATGTGCTCTGAGTGTTGATGTTGCAGAGCTTGAGCAATAGTAAAAGCAAGCACTTAAGATAATCAAATAATAAGATTTGAACATATTGGACAAGTCTCTTGTCATCTTAATCTGTTGGAAAGTATCAAAAGAATGTTAACTAAATGACTATCATCTATCCAAGCCTGTTTCTAATATTTAGTTTGTGTATTTATTTACTCACACAATCACTTGTGAGAAGGGATAGAGCTTCTAATATTTTTCCAGTGCAGAGCTTTTTTATGATCCGTGTTTGAAGCCTGTACATTCCATTTTTCTTTTGTTCTTATTTATTTTGCTGCATCTGATTTGCAACAAATTGTTTTTTTGAAAAAACTAAACTAGCCCACCCAAATTGGCATTAGAGAGAATCGAAGCTGAGACCTCAAAGAGGAGCACACTTTCAGGTCCCAAGTCAATACCACCAGGTCAACCCAAGTAGGTTATTTGCAACAAATTTGTTGTCTAATTGACACCAAATATTTCTTTATATGAGGCCTTAATTTTGAGCTGACATTATATTGATTTTTTTAATTTTTTTGAGAGGGTTTATTTTGATTGGTATTATACTCTACATAAACCTTATTTATTTTACTTCAAAAAAAAAAACCTTATTTATTTATATACAAATAAATAAATTCTCCTAAAAAATACATAAAAAATATATTTTTTTTAAACGTACATCACAATCTAATTTTAAAATAAAAGTGATTGAATATACTGTTAAGTTAAATTAATCTAAAACGTCACTTTATCATGCAAAATACAAAATGCAATTTGAAGTATTCTGAAAAAATAAAAATAAAAGAAAGCATTGAATATTTGATAAGGAGGTAGAAAGCAAAATATCAGGAAGTGAAGTGAAAAGTATGGTAGGTGCATGCAGAGCAGTAGCAGCACCACCCATTTTCAATCTTCCATTGCGAAATCATAAAACCATCAGAATTCAGAATTCTTTTCATCAGAACAAAAGCAAAGCTTTCAGAGCTCAACTTTCAAATAGACGCTTGTTCCTTTTCTCTATTCCCCTCTCTAGTTTCCTTTTCATTCCTTTTCCTGCTTTTGGTGAAGGTGACAGTGTCATTTCACAAGAGTATGACCCAGTAACTCGTTCTGAAAGAGATGCAAGTGCTTTAATCTCACAAAGAGTTTCTCGTGGTGTTGAGTTGTTGGAGAAAGGTAGAGAGTTGCAGGCTCTTGGTGACTTCAATGGCGCTCTTCAATACTTTTCTCAGGTTACCCAATATCCTTTCGTTAGGTTCTTGCTTGTTTATCTTCAATTTGGTAATGGATTATTGGATTGCTCTTGTTCATGTCTTTCGTTATTTGTTTTTTCTTTTTCCTTTTGTGACAAGACATGATATATGAATTGGCTTATTTGAGCTTATAGGAAAAAATTGATTTGATTTCATCTAAAATAGACACTTATATGATACGCACTTATCCATCTAAGATTGAGATGTAGTAGATGTCACCATATCAATTTAGATTTTAGATTGCCATTGGCTTTTCCACCTTTACTGAGCAATCAATTAAGGGAAGTTTGGATATTCATCTTAGACACTTATCATACACGTTATTTCTATAATCCGAGAGATAAGGGTAAGCCTTAAATAGCCTATGATTGCAGGCCATTGGGGGAGCTTACATGAAAATATAAGATAAAAAAGTACTAGTTAAACTATCATAAGCTGTTTTTAGAAGTTCTTCCAAACACTCACACAAGTGTTTGGGTCATAAGATGAGCTCGAACAAACTCTCTTCCAAACACCCATTTTTAATAGAATCGCCCAAAAGTAAATGAATATTTGCTATCCTAGTTAAGTTTTACTGCTAGTATTACTAACCTACTGCTAAATTAATGTTTGAAGAGAAAAATTTACCCTCTTATTCTTCAACTCTGTTGGTTGTTTATCTGAGGCAAAGATGTCACACAATGGCTATATTGTGAGACAGTTATATGTAGAGTGTCATTCAAAGTTCATGCCAAGAATTGGGACTTTACTAGAGTTCAATTTCAAACAAATGTAATATTGTTCTGTCAATGTAAGAGTGTATTATTTTTTGGAATCACTAGAGATAACAGAAATATATAATTAAACCGACTTTAGAGGCCTTGTGATTTGGAAAGTTCTCAGAGGAATTTCCACTCATCCACCTTGCAACTTCATGTGGCTAAAATTAAGCCTTGTTCATACATTACTTCTCGGGTACGAAATGAGTGACGTCGAATAGGTTCATTTTGTATTTGGTGGCTCGACCTCATCTATTTCATGGCATAACATGTCACACTCTAACCATCAATAAGTTTATGTTCATATTCTAACATGCTACCTGTTTTTGTAGGTGATTGAAAGCTACAAAGACCTAGCATTCTCTGAGTATGCAAGGGTAGGGAGAGCACTAGCCCTATATGAAATTGGTGACAGAGAAGAAGCAATAGCAGAGATGGAAGACGTTTCAATATCACTAAAGGGGTATCCAGGTAAGTTCAATTTCATAGCACTTTCGCAATAAAATCACGCTGTAGAAGAAAAATTATCGCTTTTCTCTAATGCTATTTTTTCTCTCGAGCAGAAGTACATGCAGCTCTTGCAGCAGCCTTATATGCAGATAAGCATGCTGCGTTGCTTGCTGAAAACCAGTTTACAATTGCAACTCTTCTTGATCCTCATTTTACAGATCTTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGATTAGTTCTCTGCAGCATTTCATTACACTATCTTAA

Protein sequence

>MS.gene70216.t1

MDSSSGQQEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPSLLAEGSKGVKKNIFKDKPQSDASTTGDSVISQEYDPVTRSERDASALISQRVSRGVELLEKGRELQALGDFNGALQYFSQVIESYKDLAFSEYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYADKHAALLAENQFTIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS