AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007571

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007571.t1 MTR_7g103070 98.131 214 4 0 1 214 1 214 4.82e-153 423
MS.gene007571.t1 MTR_1g062760 84.577 201 30 1 13 213 11 210 2.58e-124 350
MS.gene007571.t1 MTR_7g103070 98.726 157 2 0 58 214 2 158 4.39e-111 315
MS.gene007571.t1 MTR_1g090717 69.767 215 61 3 1 214 1 212 6.82e-105 301
MS.gene007571.t1 MTR_1g029450 67.822 202 64 1 13 214 14 214 2.24e-104 300
MS.gene007571.t1 MTR_8g093740 65.728 213 68 3 1 213 1 208 2.84e-103 297
MS.gene007571.t1 MTR_3g096350 68.000 200 63 1 13 212 9 207 1.40e-102 295
MS.gene007571.t1 MTR_8g093740 67.262 168 55 0 45 212 8 175 2.87e-86 253
MS.gene007571.t1 MTR_3g096350 77.236 123 27 1 13 135 9 130 6.73e-68 205
MS.gene007571.t1 MTR_3g096350 74.046 131 31 2 13 141 9 138 1.46e-67 204
MS.gene007571.t1 MTR_7g081700 50.495 202 95 3 13 214 5 201 2.81e-61 190
MS.gene007571.t1 MTR_8g006970 49.254 201 98 3 14 214 20 216 9.76e-60 187
MS.gene007571.t1 MTR_1g068740 48.571 210 96 5 11 213 10 214 1.49e-58 184
MS.gene007571.t1 MTR_1g068730 48.095 210 97 5 11 213 10 214 3.75e-58 182
MS.gene007571.t1 MTR_1g115325 47.343 207 99 5 13 213 12 214 4.48e-57 180
MS.gene007571.t1 MTR_8g006970 52.299 174 81 2 13 186 5 176 1.29e-56 177
MS.gene007571.t1 MTR_2g005500 48.529 204 101 3 10 213 3 202 1.67e-56 178
MS.gene007571.t1 MTR_7g100020 52.941 170 77 3 13 181 12 179 2.85e-54 173
MS.gene007571.t1 MTR_6g021790 50.877 171 78 4 13 181 3 169 1.97e-51 165
MS.gene007571.t1 MTR_2g096550 42.857 203 114 2 12 213 11 212 9.58e-51 164
MS.gene007571.t1 MTR_4g063160 44.976 209 102 6 13 213 12 215 1.21e-50 164
MS.gene007571.t1 MTR_8g031870 48.171 164 83 2 16 179 6 167 2.32e-49 159
MS.gene007571.t1 MTR_2g027660 43.868 212 98 6 17 214 7 211 2.52e-49 160
MS.gene007571.t1 MTR_8g031660 43.204 206 111 3 13 214 3 206 4.48e-49 159
MS.gene007571.t1 MTR_4g099470 47.904 167 82 3 48 214 16 177 1.07e-47 155
MS.gene007571.t1 MTR_8g031680 45.562 169 90 2 13 181 3 169 1.18e-47 155
MS.gene007571.t1 MTR_4g064897 47.674 172 88 2 13 184 9 178 2.88e-47 155
MS.gene007571.t1 MTR_2g014990 42.723 213 105 4 13 214 10 216 1.19e-46 153
MS.gene007571.t1 MTR_2g075950 42.857 217 115 4 5 214 2 216 1.01e-45 151
MS.gene007571.t1 MTR_4g088090 41.784 213 107 4 13 214 10 216 1.29e-45 150
MS.gene007571.t1 MTR_1g078200 41.121 214 111 5 14 214 12 223 3.63e-45 150
MS.gene007571.t1 MTR_6g079550 44.231 208 107 4 14 214 10 215 6.64e-45 149
MS.gene007571.t1 MTR_2g083860 41.743 218 117 3 5 214 2 217 7.92e-45 149
MS.gene007571.t1 MTR_2g005510 40.991 222 120 5 1 214 1 219 1.68e-44 148
MS.gene007571.t1 MTR_8g031830 47.097 155 80 2 16 170 6 158 2.16e-44 147
MS.gene007571.t1 MTR_4g079350 41.315 213 108 4 13 214 10 216 2.48e-44 147
MS.gene007571.t1 MTR_3g069510 45.109 184 96 3 13 193 9 190 3.55e-44 147
MS.gene007571.t1 MTR_1g068730 49.007 151 74 3 11 160 10 158 4.39e-44 145
MS.gene007571.t1 MTR_1g068740 49.669 151 73 3 11 160 10 158 6.48e-44 145
MS.gene007571.t1 MTR_8g089985 44.509 173 93 3 1 172 1 171 3.31e-43 145
MS.gene007571.t1 MTR_3g086980 43.860 171 93 3 3 172 2 170 6.14e-43 144
MS.gene007571.t1 MTR_7g051940 49.045 157 78 2 17 173 14 168 1.93e-42 142
MS.gene007571.t1 MTR_8g036220 45.349 172 92 2 1 172 1 170 2.03e-42 143
MS.gene007571.t1 MTR_2g090865 42.308 208 112 4 13 214 8 213 5.74e-42 141
MS.gene007571.t1 MTR_8g027220 45.679 162 86 2 14 175 24 183 9.27e-42 141
MS.gene007571.t1 MTR_0262s0050 45.912 159 84 2 14 172 13 169 4.91e-41 139
MS.gene007571.t1 MTR_1g052475 37.736 212 118 3 14 213 13 222 4.76e-40 137
MS.gene007571.t1 MTR_7g405790 44.643 168 91 2 17 184 16 181 8.65e-40 136
MS.gene007571.t1 MTR_5g076590 38.537 205 115 5 12 214 5 200 1.68e-39 134
MS.gene007571.t1 MTR_3g064390 37.561 205 117 5 12 214 5 200 1.71e-38 132
MS.gene007571.t1 MTR_1g094220 38.043 184 110 4 3 185 18 198 1.69e-37 129
MS.gene007571.t1 MTR_2g102060 39.286 168 99 3 18 184 12 177 8.59e-37 127
MS.gene007571.t1 MTR_7g117910 44.138 145 79 2 14 158 18 160 1.97e-36 127
MS.gene007571.t1 MTR_8g103550 39.181 171 101 3 15 184 8 176 3.44e-36 126
MS.gene007571.t1 MTR_8g107070 46.429 168 88 2 14 181 12 177 4.14e-36 127
MS.gene007571.t1 MTR_1g094220 37.356 174 106 3 3 175 18 189 7.02e-36 125
MS.gene007571.t1 MTR_4g098950 35.859 198 122 4 17 212 10 204 4.51e-35 123
MS.gene007571.t1 MTR_3g087160 34.343 198 128 2 17 214 10 205 6.16e-35 123
MS.gene007571.t1 MTR_1g094220 37.791 172 104 3 3 173 18 187 6.43e-35 123
MS.gene007571.t1 MTR_1g094220 36.364 187 114 4 3 186 18 202 1.55e-34 123
MS.gene007571.t1 MTR_8g090215 35.468 203 120 4 17 214 10 206 1.58e-34 122
MS.gene007571.t1 MTR_5g013900 34.653 202 120 4 17 212 10 205 9.90e-34 120
MS.gene007571.t1 MTR_3g064390 39.073 151 87 4 12 161 5 151 1.28e-28 105
MS.gene007571.t1 MTR_2g101890 39.506 162 91 5 18 173 12 172 4.60e-28 105
MS.gene007571.t1 MTR_4g069850 36.970 165 97 4 18 176 10 173 5.89e-28 105
MS.gene007571.t1 MTR_4g012940 37.576 165 96 5 18 176 10 173 5.13e-27 102
MS.gene007571.t1 MTR_8g092020 37.888 161 93 5 18 172 14 173 1.03e-26 102
MS.gene007571.t1 MTR_2g090875 33.333 174 101 5 18 180 8 177 2.11e-26 100
MS.gene007571.t1 MTR_6g087980 31.068 206 115 7 18 212 8 197 9.07e-26 99.8
MS.gene007571.t1 MTR_3g078260 30.688 189 117 4 18 195 10 195 1.05e-25 99.4
MS.gene007571.t1 MTR_1g097420 36.420 162 94 5 18 172 10 169 1.47e-25 99.0
MS.gene007571.t1 MTR_4g073250 31.073 177 108 5 18 183 8 181 4.63e-25 97.4
MS.gene007571.t1 MTR_4g088055 32.948 173 101 5 18 179 8 176 8.73e-25 96.7
MS.gene007571.t1 MTR_2g005500 33.824 204 91 3 10 213 3 162 5.50e-24 93.6
MS.gene007571.t1 MTR_8g075240 32.184 174 103 6 18 180 8 177 2.49e-23 92.8
MS.gene007571.t1 MTR_3g107717 32.308 195 126 4 16 209 13 202 3.21e-23 93.2
MS.gene007571.t1 MTR_3g107707 32.308 195 126 4 16 209 13 202 3.24e-23 93.2
MS.gene007571.t1 MTR_5g022600 32.759 174 102 6 18 180 8 177 3.35e-23 92.4
MS.gene007571.t1 MTR_3g107713 32.308 195 126 4 16 209 13 202 4.40e-23 92.8
MS.gene007571.t1 MTR_1g097420 34.320 169 98 6 11 172 34 196 3.78e-21 88.2
MS.gene007571.t1 MTR_6g039490 35.000 160 99 3 18 172 10 169 1.76e-19 83.6
MS.gene007571.t1 MTR_3g078260 34.167 120 76 2 18 137 10 126 2.55e-17 75.9
MS.gene007571.t1 MTR_4g113620 29.213 178 104 5 16 185 13 176 2.60e-15 72.0
MS.gene007571.t1 MTR_8g031810 40.217 92 41 1 17 108 7 84 2.84e-15 68.9
MS.gene007571.t1 MTR_1452s0010 46.377 69 36 1 47 115 12 79 1.95e-14 67.0
MS.gene007571.t1 MTR_5g092060 27.835 194 127 6 4 189 91 279 1.98e-14 70.9
MS.gene007571.t1 MTR_1686s0010 42.647 68 38 1 48 115 13 79 5.31e-13 62.8
MS.gene007571.t1 MTR_4g047870 26.667 180 124 3 15 189 90 266 5.66e-13 66.6
MS.gene007571.t1 MTR_5g078090 32.727 165 89 9 21 175 24 176 7.16e-13 64.7
MS.gene007571.t1 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.42e-11 62.0
MS.gene007571.t1 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.47e-11 62.4
MS.gene007571.t1 MTR_5g015370 30.675 163 97 8 21 176 24 177 3.73e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007571.t1 AT5G03530 82.710 214 33 2 1 214 1 210 9.31e-128 359
MS.gene007571.t1 AT5G03530 82.710 214 33 2 1 214 1 210 9.31e-128 359
MS.gene007571.t1 AT1G43890 70.588 204 56 2 1 204 1 200 2.39e-105 302
MS.gene007571.t1 AT1G43890 70.588 204 56 2 1 204 1 200 2.39e-105 302
MS.gene007571.t1 AT1G43890 70.588 204 56 2 1 204 1 200 2.39e-105 302
MS.gene007571.t1 AT3G09910 72.430 214 49 4 1 214 1 204 7.59e-103 296
MS.gene007571.t1 AT3G09910 72.430 214 49 4 1 214 1 204 7.59e-103 296
MS.gene007571.t1 AT3G09910 72.430 214 49 4 1 214 1 204 7.59e-103 296
MS.gene007571.t1 AT3G09910 76.536 179 38 2 1 179 1 175 3.55e-92 268
MS.gene007571.t1 AT3G09910 76.536 179 38 2 1 179 1 175 3.55e-92 268
MS.gene007571.t1 AT1G02130 50.495 202 96 3 13 214 5 202 1.10e-61 191
MS.gene007571.t1 AT3G11730 48.039 204 104 2 10 213 2 203 5.05e-59 184
MS.gene007571.t1 AT5G47200 49.010 202 98 3 13 214 5 201 1.46e-58 183
MS.gene007571.t1 AT4G17530 49.010 202 98 3 13 214 5 201 1.48e-58 183
MS.gene007571.t1 AT3G53610 46.860 207 100 5 13 213 12 214 1.53e-56 179
MS.gene007571.t1 AT3G53610 46.860 207 100 5 13 213 12 214 1.53e-56 179
MS.gene007571.t1 AT3G53610 46.860 207 100 5 13 213 12 214 1.53e-56 179
MS.gene007571.t1 AT5G59840 47.343 207 99 5 13 213 12 214 1.57e-56 179
MS.gene007571.t1 AT3G09900 46.919 211 101 5 11 214 10 216 1.94e-55 176
MS.gene007571.t1 AT5G03520 47.847 209 100 5 11 214 10 214 2.89e-55 175
MS.gene007571.t1 AT3G46060 46.860 207 100 5 13 213 12 214 5.60e-55 174
MS.gene007571.t1 AT3G46060 46.860 207 100 5 13 213 12 214 5.60e-55 174
MS.gene007571.t1 AT3G46060 46.860 207 100 5 13 213 12 214 5.60e-55 174
MS.gene007571.t1 AT4G35860 52.632 171 75 4 13 181 3 169 4.23e-54 172
MS.gene007571.t1 AT4G17160 45.545 202 101 5 17 213 7 204 1.90e-51 165
MS.gene007571.t1 AT4G17170 44.076 211 97 6 17 213 7 210 3.40e-50 162
MS.gene007571.t1 AT5G47520 42.654 211 109 4 14 214 12 220 1.34e-47 156
MS.gene007571.t1 AT1G18200 51.479 169 80 2 14 182 11 177 7.82e-47 154
MS.gene007571.t1 AT1G05810 44.175 206 105 4 17 214 13 216 1.26e-46 153
MS.gene007571.t1 AT5G45750 43.333 210 107 4 13 214 10 215 1.37e-46 153
MS.gene007571.t1 AT5G60860 42.723 213 105 4 13 214 10 216 3.81e-46 152
MS.gene007571.t1 AT1G05810 44.175 206 105 4 17 214 59 262 4.34e-46 153
MS.gene007571.t1 AT2G43130 41.827 208 114 3 12 214 8 213 4.39e-46 152
MS.gene007571.t1 AT1G16920 44.231 208 108 4 13 214 10 215 9.10e-46 151
MS.gene007571.t1 AT3G07410 41.935 217 116 3 6 214 2 216 1.25e-45 151
MS.gene007571.t1 AT1G07410 41.546 207 114 3 13 214 9 213 3.29e-45 150
MS.gene007571.t1 AT4G39990 40.476 210 114 4 14 214 15 222 3.48e-45 150
MS.gene007571.t1 AT1G73640 50.000 168 82 2 14 181 11 176 7.29e-45 149
MS.gene007571.t1 AT5G59150 46.512 172 90 2 13 184 9 178 8.33e-45 149
MS.gene007571.t1 AT1G28550 42.857 210 110 4 13 214 10 217 2.06e-44 148
MS.gene007571.t1 AT2G33870 42.381 210 111 5 13 214 10 217 2.24e-44 147
MS.gene007571.t1 AT3G12160 40.670 209 113 4 14 213 13 219 2.71e-44 147
MS.gene007571.t1 AT3G46830 46.512 172 90 2 13 184 9 178 2.99e-44 147
MS.gene007571.t1 AT3G46830 46.512 172 90 2 13 184 9 178 2.99e-44 147
MS.gene007571.t1 AT2G31680 41.935 217 115 4 7 214 3 217 3.09e-44 147
MS.gene007571.t1 AT5G65270 43.094 181 100 3 1 180 1 179 5.99e-44 147
MS.gene007571.t1 AT1G09630 48.466 163 82 2 13 175 9 169 9.81e-44 146
MS.gene007571.t1 AT3G15060 42.254 213 106 4 13 214 10 216 1.01e-43 146
MS.gene007571.t1 AT4G18800 40.654 214 121 3 5 214 2 213 1.30e-42 143
MS.gene007571.t1 AT1G06400 42.308 208 112 3 13 214 10 215 1.33e-42 143
MS.gene007571.t1 AT4G18430 39.906 213 111 4 13 214 10 216 1.98e-42 142
MS.gene007571.t1 AT5G03520 46.286 175 85 5 45 214 34 204 2.09e-42 142
MS.gene007571.t1 AT5G47960 39.048 210 116 5 14 213 13 220 3.79e-41 139
MS.gene007571.t1 AT4G35860 54.032 124 55 2 58 181 2 123 1.82e-39 133
MS.gene007571.t1 AT1G01200 40.541 185 103 4 14 193 26 208 1.11e-38 134
MS.gene007571.t1 AT3G54840 38.172 186 111 4 1 184 18 201 2.33e-38 132
MS.gene007571.t1 AT3G54840 38.506 174 104 3 1 173 18 189 1.30e-36 127
MS.gene007571.t1 AT3G54840 39.881 168 97 4 19 184 2 167 1.83e-36 126
MS.gene007571.t1 AT5G45130 39.583 192 106 5 10 193 3 192 2.37e-36 126
MS.gene007571.t1 AT4G19640 41.358 162 93 2 18 179 12 171 8.27e-36 125
MS.gene007571.t1 AT4G39890 39.375 160 96 1 17 176 10 168 1.83e-35 125
MS.gene007571.t1 AT5G45130 39.779 181 100 4 20 193 22 200 3.88e-34 121
MS.gene007571.t1 AT2G22290 34.804 204 120 5 17 214 10 206 1.76e-33 119
MS.gene007571.t1 AT5G10260 34.171 199 127 3 17 213 10 206 4.92e-33 118
MS.gene007571.t1 AT2G44610 37.500 160 98 2 17 176 10 167 6.19e-33 118
MS.gene007571.t1 AT5G64990 38.462 156 94 2 17 172 8 161 2.67e-31 114
MS.gene007571.t1 AT5G59150 45.669 127 67 2 58 184 3 127 2.67e-30 110
MS.gene007571.t1 AT2G44690 35.393 178 101 5 18 184 20 194 5.36e-29 108
MS.gene007571.t1 AT3G18820 33.854 192 112 5 18 195 10 200 1.13e-28 107
MS.gene007571.t1 AT5G64990 36.810 163 94 3 17 172 8 168 1.48e-28 107
MS.gene007571.t1 AT1G22740 37.278 169 96 5 18 177 10 177 3.66e-28 105
MS.gene007571.t1 AT4G09720 38.788 165 94 5 18 176 10 173 5.26e-28 105
MS.gene007571.t1 AT1G52280 37.647 170 99 5 10 173 2 170 2.57e-27 103
MS.gene007571.t1 AT4G09720 37.647 170 94 5 18 176 10 178 4.57e-27 103
MS.gene007571.t1 AT1G49300 32.812 192 114 5 18 195 10 200 5.96e-27 102
MS.gene007571.t1 AT1G49300 32.812 192 114 5 18 195 10 200 5.96e-27 102
MS.gene007571.t1 AT4G19640 41.667 132 75 2 18 149 12 141 6.40e-27 100
MS.gene007571.t1 AT4G09720 36.932 176 93 5 18 176 10 184 1.01e-26 102
MS.gene007571.t1 AT4G35020 31.638 177 107 4 18 183 8 181 2.82e-26 100
MS.gene007571.t1 AT4G35020 31.638 177 107 4 18 183 8 181 2.82e-26 100
MS.gene007571.t1 AT4G35020 31.638 177 107 4 18 183 8 181 2.82e-26 100
MS.gene007571.t1 AT2G21880 36.145 166 99 4 17 176 10 174 3.56e-26 100
MS.gene007571.t1 AT4G19640 42.520 127 71 2 18 144 12 136 7.39e-26 99.4
MS.gene007571.t1 AT3G51300 32.759 174 102 5 18 180 8 177 9.85e-26 99.4
MS.gene007571.t1 AT3G48040 31.844 179 107 5 18 185 10 184 2.52e-25 98.6
MS.gene007571.t1 AT4G28950 31.492 181 111 5 17 188 7 183 3.58e-25 98.2
MS.gene007571.t1 AT3G16100 36.364 165 98 5 18 176 10 173 5.38e-25 97.4
MS.gene007571.t1 AT2G17800 32.759 174 102 5 18 180 8 177 6.81e-25 97.1
MS.gene007571.t1 AT2G17800 32.759 174 102 5 18 180 8 177 6.81e-25 97.1
MS.gene007571.t1 AT1G20090 31.034 174 105 5 18 180 7 176 1.27e-24 96.3
MS.gene007571.t1 AT1G75840 31.034 174 105 5 18 180 8 177 2.09e-24 95.9
MS.gene007571.t1 AT5G39620 36.471 170 101 4 17 180 6 174 2.41e-24 95.9
MS.gene007571.t1 AT5G45970 33.533 167 97 5 18 173 8 171 4.21e-24 95.1
MS.gene007571.t1 AT4G35950 32.184 174 103 5 18 180 8 177 4.60e-24 94.7
MS.gene007571.t1 AT5G55080 36.145 166 97 6 16 179 13 171 3.19e-23 93.2
MS.gene007571.t1 AT5G20020 32.584 178 107 4 16 185 13 185 3.77e-22 90.5
MS.gene007571.t1 AT5G55190 32.584 178 107 4 16 185 13 185 3.94e-22 90.5
MS.gene007571.t1 AT5G62880 31.737 167 100 5 18 173 10 173 5.40e-22 90.1
MS.gene007571.t1 AT5G20010 32.584 178 107 4 16 185 13 185 7.09e-22 89.7
MS.gene007571.t1 AT4G09720 40.741 135 73 5 48 176 6 139 1.98e-21 87.4
MS.gene007571.t1 AT4G09720 40.741 135 73 5 48 176 6 139 1.98e-21 87.4
MS.gene007571.t1 AT4G09720 40.741 135 73 5 48 176 6 139 1.98e-21 87.4
MS.gene007571.t1 AT3G48040 31.875 160 95 4 18 166 10 166 2.01e-21 87.4
MS.gene007571.t1 AT5G62880 31.288 163 98 5 18 169 10 169 1.06e-19 83.2
MS.gene007571.t1 AT2G21880 37.778 135 77 4 48 176 16 149 4.80e-19 81.6
MS.gene007571.t1 AT2G21880 37.778 135 77 4 48 176 16 149 4.80e-19 81.6
MS.gene007571.t1 AT4G35020 34.483 116 73 2 18 133 8 120 1.41e-17 76.6
MS.gene007571.t1 AT4G35020 34.483 116 73 2 18 133 8 120 1.41e-17 76.6
MS.gene007571.t1 AT3G51290 33.803 142 80 5 43 173 634 772 5.02e-17 79.3
MS.gene007571.t1 AT2G21880 31.515 165 98 5 18 176 11 166 8.13e-17 75.9
MS.gene007571.t1 AT5G46025 39.216 102 61 1 78 179 6 106 2.79e-16 72.4
MS.gene007571.t1 AT3G21700 29.319 191 125 4 6 189 95 282 2.66e-14 70.5
MS.gene007571.t1 AT5G09910 32.743 113 62 2 18 117 24 135 1.02e-12 66.2
MS.gene007571.t1 AT5G09910 32.743 113 62 2 18 117 24 135 1.02e-12 66.2
MS.gene007571.t1 AT5G37680 29.375 160 101 6 21 175 24 176 1.38e-12 64.3
MS.gene007571.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.24e-11 63.2
MS.gene007571.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.24e-11 63.2
MS.gene007571.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.24e-11 63.2
MS.gene007571.t1 AT3G49860 29.605 152 91 6 21 164 16 159 6.63e-11 59.3

Find 47 sgRNAs with CRISPR-Local

Find 209 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGATTAAAGCTTACAATT+TGG 0.225188 7.1:-9376544 MS.gene007571:CDS
ATCTTGTTGATTGGTGATTC+TGG 0.251391 7.1:-9377086 MS.gene007571:CDS
AAGATTAAAGCTTACAATTT+GGG 0.307266 7.1:-9376543 MS.gene007571:CDS
GAACAACAGTCATCACAAAA+TGG 0.361600 7.1:-9373696 MS.gene007571:CDS
CTTAGCCCTTGCTAAAGAAC+TGG 0.372774 7.1:-9374579 MS.gene007571:CDS
TCTTTCAAGATCTTGTTGAT+TGG 0.384126 7.1:-9377095 MS.gene007571:CDS
AAGGATCAGCAGCAACAAAA+AGG 0.384127 7.1:-9373740 MS.gene007571:CDS
GGAACTCTATTCAACTAATC+AGG 0.391791 7.1:-9376025 MS.gene007571:CDS
AGAAGTGTGGTCTAAGGAAT+TGG 0.405138 7.1:-9376046 MS.gene007571:CDS
AATGGAAGCTCCTAGTCTAT+TGG 0.413250 7.1:-9373766 MS.gene007571:CDS
TTGATTGGTGATTCTGGTGT+TGG 0.414485 7.1:-9377080 MS.gene007571:CDS
AAGATCTTCAACAGATGAAC+TGG 0.417295 7.1:+9377028 None:intergenic
TGAATCTATTGCAGCTGGAC+AGG 0.437434 7.1:-9376384 MS.gene007571:intron
CAGCTGGACAGGAAAGGTTC+AGG 0.443385 7.1:-9376373 MS.gene007571:CDS
CTAACAAGTTCTTACTATAG+AGG 0.484550 7.1:-9376347 MS.gene007571:CDS
AGATCTTGAAAGAGAGATCA+TGG 0.489933 7.1:+9377105 None:intergenic
CACTTCTGACAAGTTTGTAA+AGG 0.493613 7.1:+9376062 None:intergenic
CTTGTCAGAAGTGTGGTCTA+AGG 0.494158 7.1:-9376052 MS.gene007571:CDS
CTTTGAAGAACTCGCTCTAA+AGG 0.500370 7.1:-9374504 MS.gene007571:intron
TATTACTCAGGATTCTGAAA+GGG 0.503960 7.1:-9374621 MS.gene007571:intron
GAAGATCTTTCACCTACCAT+TGG 0.506624 7.1:-9377014 MS.gene007571:intron
GATCAAAACGCTCACGGTAG+GGG 0.511135 7.1:-9376570 MS.gene007571:CDS
GGAGCACAAGGAATCATTCT+CGG 0.521124 7.1:-9376326 MS.gene007571:intron
ATCAAAACGCTCACGGTAGG+GGG 0.523932 7.1:-9376569 MS.gene007571:CDS
ATGAGTTCATCATCAGGCTC+TGG 0.529393 7.1:-9377140 MS.gene007571:CDS
AGATCAAAACGCTCACGGTA+GGG 0.533027 7.1:-9376571 MS.gene007571:CDS
AACACCCCAGTTCTTTAGCA+AGG 0.534481 7.1:+9374573 None:intergenic
TGCTAAAACTCGAGAAAATG+TGG 0.538765 7.1:-9374534 MS.gene007571:CDS
AAGATCAAAACGCTCACGGT+AGG 0.541095 7.1:-9376572 MS.gene007571:CDS
AGGGCTGTGAGCAGAGAAGA+GGG 0.551482 7.1:-9374602 MS.gene007571:CDS
GAGTGCGTGAAGATGCTAGT+TGG 0.552532 7.1:-9376003 MS.gene007571:CDS
GCTCCTAGTCTATTGGAAGA+AGG 0.555852 7.1:-9373759 MS.gene007571:CDS
AAGGGCTGTGAGCAGAGAAG+AGG 0.564683 7.1:-9374603 MS.gene007571:CDS
AAGCTTACAATTTGGGACAC+AGG 0.567890 7.1:-9376536 MS.gene007571:intron
TTATTACTCAGGATTCTGAA+AGG 0.568493 7.1:-9374622 MS.gene007571:intron
TTAGCCCTTGCTAAAGAACT+GGG 0.569011 7.1:-9374578 MS.gene007571:CDS
ACACCCCAGTTCTTTAGCAA+GGG 0.602057 7.1:+9374574 None:intergenic
GATCCTTCTTCCAATAGACT+AGG 0.615354 7.1:+9373756 None:intergenic
TTCTAGTTTATGATGTCACA+AGG 0.619598 7.1:-9376092 MS.gene007571:intron
GAGTTGTAAATACCAATGGT+AGG 0.627519 7.1:+9377002 None:intergenic
TCAGGCTCTGGTCAGAGCAG+TGG 0.631933 7.1:-9377128 MS.gene007571:CDS
TTACAAACTTGTCAGAAGTG+TGG 0.645757 7.1:-9376059 MS.gene007571:CDS
TCAAAACGCTCACGGTAGGG+GGG 0.657837 7.1:-9376568 MS.gene007571:CDS
TCTTACTATAGAGGAGCACA+AGG 0.667709 7.1:-9376338 MS.gene007571:CDS
CTATTGCAGCTGGACAGGAA+AGG 0.669851 7.1:-9376379 MS.gene007571:intron
CAACAGTCATCACAAAATGG+AGG 0.675652 7.1:-9373693 MS.gene007571:CDS
TAGCCCTTGCTAAAGAACTG+GGG 0.718721 7.1:-9374577 MS.gene007571:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAATTAA+CGG + chr7.1:9375490-9375509 None:intergenic 0.0%
!! TATTGAAAAACTATATACTA+AGG + chr7.1:9376516-9376535 None:intergenic 15.0%
!! TCTCATTTCTATTAAATTAA+TGG - chr7.1:9373841-9373860 MS.gene007571:intron 15.0%
!!! AGCATTTTAAAAAAACAAAA+TGG + chr7.1:9374143-9374162 None:intergenic 15.0%
!!! ATTAACCAATTTAATTTAAG+TGG - chr7.1:9374390-9374409 MS.gene007571:intron 15.0%
!!! TATTATATTTCTATAGTTCA+GGG + chr7.1:9376920-9376939 None:intergenic 15.0%
!!! TGAAATATATTTTATTGGAT+TGG - chr7.1:9375068-9375087 MS.gene007571:intron 15.0%
!!! TGTCTTGAAATATATTTTAT+TGG - chr7.1:9375063-9375082 MS.gene007571:intron 15.0%
!!! TTATTATATTTCTATAGTTC+AGG + chr7.1:9376921-9376940 None:intergenic 15.0%
!!! TTTTTGTATAATATATTGAC+CGG - chr7.1:9376691-9376710 MS.gene007571:intron 15.0%
!! AAAAAAAAAAAATTAACGGG+TGG + chr7.1:9375486-9375505 None:intergenic 20.0%
!! AAAGATTAAAGCTTACAATT+TGG - chr7.1:9374276-9374295 MS.gene007571:intron 20.0%
!! AAGAAATGTTATTGTAAGTA+AGG + chr7.1:9375754-9375773 None:intergenic 20.0%
!! AAGATTAAAGCTTACAATTT+GGG - chr7.1:9374277-9374296 MS.gene007571:intron 20.0%
!! AATAAGTAGTTGATTAAACA+AGG - chr7.1:9376936-9376955 MS.gene007571:intron 20.0%
!! AATATAAATGAAGAATTCAG+AGG - chr7.1:9376552-9376571 MS.gene007571:CDS 20.0%
!! ACTTACCACTTAAATTAAAT+TGG + chr7.1:9374398-9374417 None:intergenic 20.0%
!! AGAAATGTTATTGTAAGTAA+GGG + chr7.1:9375753-9375772 None:intergenic 20.0%
!! ATAAGATATACATTTGTATG+TGG - chr7.1:9375860-9375879 MS.gene007571:intron 20.0%
!! ATACAAAAATTCATTCTCTA+TGG + chr7.1:9375027-9375046 None:intergenic 20.0%
!! ATTAGCATAAGCTTAAATAT+TGG - chr7.1:9376613-9376632 MS.gene007571:intron 20.0%
!! CAATGACATACTTATATAAA+AGG + chr7.1:9374026-9374045 None:intergenic 20.0%
!! GTTCAACTATTACTAAATAA+TGG + chr7.1:9374620-9374639 None:intergenic 20.0%
!! TATTTAAGCTTATGCTAATT+TGG + chr7.1:9376612-9376631 None:intergenic 20.0%
!! TTAAAAAAACAAAATGGAGA+AGG + chr7.1:9374137-9374156 None:intergenic 20.0%
!! TTATTTAGTAATAGTTGAAC+TGG - chr7.1:9374620-9374639 MS.gene007571:intron 20.0%
!! TTGTCATTAATTCTAATGAA+TGG + chr7.1:9375172-9375191 None:intergenic 20.0%
!!! AATGAATTTTTGTATTGGAT+TGG - chr7.1:9375032-9375051 MS.gene007571:intron 20.0%
!!! ATATATTTTATTGGATTGGT+TGG - chr7.1:9375072-9375091 MS.gene007571:intron 20.0%
!!! GATAGATGATTTTTTGTATT+AGG - chr7.1:9376042-9376061 MS.gene007571:CDS 20.0%
!!! TAGAGAATGAATTTTTGTAT+TGG - chr7.1:9375027-9375046 MS.gene007571:intron 20.0%
!!! TAGTTGTTATTTTGTTAGTA+GGG - chr7.1:9375522-9375541 MS.gene007571:intron 20.0%
!!! TTAGTTGTTATTTTGTTAGT+AGG - chr7.1:9375521-9375540 MS.gene007571:intron 20.0%
!!! TTCCACTTATAAAAACTTTT+AGG + chr7.1:9375379-9375398 None:intergenic 20.0%
! AGATAAAAGCAACATAATTG+AGG + chr7.1:9374172-9374191 None:intergenic 25.0%
! AGATGGTATGAAATATTTGT+TGG - chr7.1:9375459-9375478 MS.gene007571:intron 25.0%
! AGTATTAAACTTCCATTTAG+AGG - chr7.1:9375925-9375944 MS.gene007571:intron 25.0%
! ATCAAATTATGACATACTAG+TGG - chr7.1:9377014-9377033 MS.gene007571:intron 25.0%
! CTAATAAGAAGCTTACATAT+TGG - chr7.1:9376732-9376751 MS.gene007571:intron 25.0%
! CTATTATAAGAAAAGTCTTC+TGG + chr7.1:9374960-9374979 None:intergenic 25.0%
! CTTATTTCATTCATTCTGAA+TGG + chr7.1:9375845-9375864 None:intergenic 25.0%
! GATGGTATGAAATATTTGTT+GGG - chr7.1:9375460-9375479 MS.gene007571:intron 25.0%
! TAAATAATGGTTTCACAACA+AGG + chr7.1:9374607-9374626 None:intergenic 25.0%
! TCATCATTGAATCTGTTAAT+TGG - chr7.1:9373960-9373979 MS.gene007571:intron 25.0%
!! GACCTAAAAGTTTTTATAAG+TGG - chr7.1:9375374-9375393 MS.gene007571:intron 25.0%
!!! AAGTTGATAGTTTATTCTAG+GGG + chr7.1:9376894-9376913 None:intergenic 25.0%
!!! AATTTTTGTATTGGATTGGT+AGG - chr7.1:9375036-9375055 MS.gene007571:intron 25.0%
!!! AGTTGTTATTTTGTTAGTAG+GGG - chr7.1:9375523-9375542 MS.gene007571:intron 25.0%
!!! CAAGTTGATAGTTTATTCTA+GGG + chr7.1:9376895-9376914 None:intergenic 25.0%
!!! GCTCAATCTTAATTTTAAGA+TGG - chr7.1:9375442-9375461 MS.gene007571:intron 25.0%
AAAAATCATCTATCTCCACA+AGG + chr7.1:9376036-9376055 None:intergenic 30.0%
AAAGACAAGTTCTTCTAAGT+TGG + chr7.1:9375293-9375312 None:intergenic 30.0%
AAAGGTCTAATTTCGTTAAG+GGG + chr7.1:9374340-9374359 None:intergenic 30.0%
AATGAATGGTGAAATAGACT+TGG + chr7.1:9375158-9375177 None:intergenic 30.0%
AATGACATCTATGCTAAATG+AGG + chr7.1:9376069-9376088 None:intergenic 30.0%
AATGCCTAATGTCAGTTAAT+TGG + chr7.1:9376393-9376412 None:intergenic 30.0%
ACAAAGGTCTAATTTCGTTA+AGG + chr7.1:9374342-9374361 None:intergenic 30.0%
AGAAATTGTGGTGTTTATCT+TGG - chr7.1:9374569-9374588 MS.gene007571:CDS 30.0%
AGATAAACACCACAATTTCT+CGG + chr7.1:9374569-9374588 None:intergenic 30.0%
AGCTTCCATTATCTACAAAA+TGG + chr7.1:9377044-9377063 None:intergenic 30.0%
AGTGCTTATCTACAATTCTA+CGG - chr7.1:9376763-9376782 MS.gene007571:intron 30.0%
CAAAGGTCTAATTTCGTTAA+GGG + chr7.1:9374341-9374360 None:intergenic 30.0%
CAATTAGAGCAGTTAAACAA+TGG + chr7.1:9373996-9374015 None:intergenic 30.0%
CAATTCTGTTATATGTTCCT+TGG - chr7.1:9376462-9376481 MS.gene007571:intron 30.0%
CATATGATTTACAGTTCTAC+TGG - chr7.1:9375988-9376007 MS.gene007571:CDS 30.0%
CCTAGAATAAACTATCAACT+TGG - chr7.1:9376893-9376912 MS.gene007571:intron 30.0%
CTAACAAGTTCTTACTATAG+AGG - chr7.1:9374473-9374492 MS.gene007571:intron 30.0%
GAAATTGTGGTGTTTATCTT+GGG - chr7.1:9374570-9374589 MS.gene007571:CDS 30.0%
TAATTTGGTAAGAACTCACA+GGG + chr7.1:9376597-9376616 None:intergenic 30.0%
TAGATGTGTTAAATTCTTCC+AGG - chr7.1:9374926-9374945 MS.gene007571:intron 30.0%
TCTTTCAAGATCTTGTTGAT+TGG - chr7.1:9373725-9373744 MS.gene007571:CDS 30.0%
TGTTCCAATTAACTGACATT+AGG - chr7.1:9376386-9376405 MS.gene007571:intron 30.0%
TTACACTTCACTAAGTTTGT+TGG - chr7.1:9376411-9376430 MS.gene007571:intron 30.0%
TTATTACTCAGGATTCTGAA+AGG - chr7.1:9376198-9376217 MS.gene007571:intron 30.0%
! ATGTGAGATTTTCACATGAT+TGG - chr7.1:9376142-9376161 MS.gene007571:intron 30.0%
! ATGTTGTTGTTATGATCTGT+AGG - chr7.1:9374215-9374234 MS.gene007571:intron 30.0%
! CCTACTTGAAATACTCTTTT+AGG + chr7.1:9375724-9375743 None:intergenic 30.0%
! GAACACCATTTTGTAGATAA+TGG - chr7.1:9377036-9377055 MS.gene007571:CDS 30.0%
! GTTAGTATTTTTCTCCTTAC+CGG - chr7.1:9376796-9376815 MS.gene007571:intron 30.0%
! GTTATTTCATTGTCTAAACG+TGG + chr7.1:9375119-9375138 None:intergenic 30.0%
! TATTACTCAGGATTCTGAAA+GGG - chr7.1:9376199-9376218 MS.gene007571:intron 30.0%
! TTAGTATTTTTCTCCTTACC+GGG - chr7.1:9376797-9376816 MS.gene007571:intron 30.0%
!! AAAAGAGTATTTCAAGTAGG+AGG - chr7.1:9375724-9375743 MS.gene007571:intron 30.0%
!! AGTTGATAGTTTATTCTAGG+GGG + chr7.1:9376893-9376912 None:intergenic 30.0%
!! CCAAGTTGATAGTTTATTCT+AGG + chr7.1:9376896-9376915 None:intergenic 30.0%
!! CCTAAAAGAGTATTTCAAGT+AGG - chr7.1:9375721-9375740 MS.gene007571:intron 30.0%
!! GATTTTGAGTGAAACTTGTA+TGG - chr7.1:9376963-9376982 MS.gene007571:intron 30.0%
!! TAGATCATCAAGAAAGTACT+AGG - chr7.1:9374985-9375004 MS.gene007571:intron 30.0%
!! TTCTAGTTTATGATGTCACA+AGG - chr7.1:9374728-9374747 MS.gene007571:intron 30.0%
!!! TTTTAAGATCAAAACGCTCA+CGG - chr7.1:9374244-9374263 MS.gene007571:intron 30.0%
AAGATCTTCAACAGATGAAC+TGG + chr7.1:9373795-9373814 None:intergenic 35.0%
ACATAGGAGTTGGAATGATA+AGG + chr7.1:9375567-9375586 None:intergenic 35.0%
ACGAATGTGTGAAAAATGAC+AGG - chr7.1:9374900-9374919 MS.gene007571:intron 35.0%
ACTTCTGTATGCAGATTTCT+CGG + chr7.1:9376661-9376680 None:intergenic 35.0%
AGAAGAACTTGTCTTTCGTA+CGG - chr7.1:9375297-9375316 MS.gene007571:intron 35.0%
AGATCTTGAAAGAGAGATCA+TGG + chr7.1:9373718-9373737 None:intergenic 35.0%
ATACAGAGAGAAATGATCCA+AGG + chr7.1:9376482-9376501 None:intergenic 35.0%
ATGCTGCTAAGATTGAACAA+AGG + chr7.1:9374358-9374377 None:intergenic 35.0%
CAAGACAGAAACATCATCAA+AGG + chr7.1:9376359-9376378 None:intergenic 35.0%
CACTTCTGACAAGTTTGTAA+AGG + chr7.1:9374761-9374780 None:intergenic 35.0%
CTAATTTGGTAAGAACTCAC+AGG + chr7.1:9376598-9376617 None:intergenic 35.0%
CTATCTGTTATTGAGCTACT+CGG - chr7.1:9375627-9375646 MS.gene007571:intron 35.0%
CTCAATAACAGATAGTCCAA+GGG + chr7.1:9375622-9375641 None:intergenic 35.0%
GAACAACAGTCATCACAAAA+TGG - chr7.1:9377124-9377143 MS.gene007571:CDS 35.0%
GAGAGAGTTGTAAATACCAA+TGG + chr7.1:9373825-9373844 None:intergenic 35.0%
GAGTTGTAAATACCAATGGT+AGG + chr7.1:9373821-9373840 None:intergenic 35.0%
GATAAACACCACAATTTCTC+GGG + chr7.1:9374568-9374587 None:intergenic 35.0%
GGAACTCTATTCAACTAATC+AGG - chr7.1:9374795-9374814 MS.gene007571:intron 35.0%
GTTTATCTTGGGACTAAAGA+TGG - chr7.1:9374581-9374600 MS.gene007571:CDS 35.0%
TAGCTAGATCAAGAATCAAG+AGG + chr7.1:9373873-9373892 None:intergenic 35.0%
TATCTGTTATTGAGCTACTC+GGG - chr7.1:9375628-9375647 MS.gene007571:intron 35.0%
TATGCTATTGCTATGTGCAT+TGG + chr7.1:9376094-9376113 None:intergenic 35.0%
TCATCAGAATATCATGGTGA+TGG + chr7.1:9375792-9375811 None:intergenic 35.0%
TGCTAAAACTCGAGAAAATG+TGG - chr7.1:9376286-9376305 MS.gene007571:intron 35.0%
TGGATGTCATCAGAATATCA+TGG + chr7.1:9375798-9375817 None:intergenic 35.0%
TTACAAACTTGTCAGAAGTG+TGG - chr7.1:9374761-9374780 MS.gene007571:intron 35.0%
! ATCTTGTTGATTGGTGATTC+TGG - chr7.1:9373734-9373753 MS.gene007571:CDS 35.0%
! CAAATGATAGTGCCTCTAAA+TGG + chr7.1:9375940-9375959 None:intergenic 35.0%
! TGAGATTTTCACATGATTGG+TGG - chr7.1:9376145-9376164 MS.gene007571:intron 35.0%
!! ATTGGATTGGTTGGAAATTG+TGG - chr7.1:9375081-9375100 MS.gene007571:intron 35.0%
!! GTTGATAGTTTATTCTAGGG+GGG + chr7.1:9376892-9376911 None:intergenic 35.0%
!!! ATAAGGTGGCTTCTAGTTTT+GGG + chr7.1:9375595-9375614 None:intergenic 35.0%
!!! TGTTATTTTGTTAGTAGGGG+TGG - chr7.1:9375526-9375545 MS.gene007571:intron 35.0%
AAGGATCAGCAGCAACAAAA+AGG - chr7.1:9377080-9377099 MS.gene007571:CDS 40.0%
AATGGAAGCTCCTAGTCTAT+TGG - chr7.1:9377054-9377073 MS.gene007571:CDS 40.0%
AGCTGAGAAGTTAAAGATCC+AGG + chr7.1:9376831-9376850 None:intergenic 40.0%
ATCTCCACAAGGTTCTTCAA+TGG + chr7.1:9376025-9376044 None:intergenic 40.0%
CAACAGTCATCACAAAATGG+AGG - chr7.1:9377127-9377146 MS.gene007571:CDS 40.0%
CAAGATCAATCTTACCACTG+AGG + chr7.1:9374067-9374086 None:intergenic 40.0%
CACGCTCAAAACTAGACATT+TGG + chr7.1:9375661-9375680 None:intergenic 40.0%
GAAACCATTGAAGAACCTTG+TGG - chr7.1:9376018-9376037 MS.gene007571:CDS 40.0%
GAAGATCTTTCACCTACCAT+TGG - chr7.1:9373806-9373825 MS.gene007571:intron 40.0%
GATCCTTCTTCCAATAGACT+AGG + chr7.1:9377067-9377086 None:intergenic 40.0%
GCTCAATAACAGATAGTCCA+AGG + chr7.1:9375623-9375642 None:intergenic 40.0%
GCTGAGAAGTTAAAGATCCA+GGG + chr7.1:9376830-9376849 None:intergenic 40.0%
GGCTAAAGCATACTTACGAT+AGG + chr7.1:9375265-9375284 None:intergenic 40.0%
GTAATTAGCTGTTACCTCAG+TGG - chr7.1:9374050-9374069 MS.gene007571:intron 40.0%
TAGGAGTTGGAATGATAAGG+AGG + chr7.1:9375564-9375583 None:intergenic 40.0%
TATGCTCAAGTGTCTCAAGT+TGG + chr7.1:9375972-9375991 None:intergenic 40.0%
TCATTCTCGGTATGCTAATG+TGG - chr7.1:9374507-9374526 MS.gene007571:CDS 40.0%
TCTGCTAGGGTTTATTACTC+AGG - chr7.1:9376187-9376206 MS.gene007571:intron 40.0%
TTAGCCCTTGCTAAAGAACT+GGG - chr7.1:9376242-9376261 MS.gene007571:intron 40.0%
TTGTTCTTCCCGAGAAATTG+TGG - chr7.1:9374557-9374576 MS.gene007571:CDS 40.0%
! AAGCTTACAATTTGGGACAC+AGG - chr7.1:9374284-9374303 MS.gene007571:intron 40.0%
! AGAAGTGTGGTCTAAGGAAT+TGG - chr7.1:9374774-9374793 MS.gene007571:intron 40.0%
! AGCATTGAATCTATTGCAGC+TGG - chr7.1:9374431-9374450 MS.gene007571:intron 40.0%
! AGTCTTCTGGTAATGAAACC+TGG + chr7.1:9374947-9374966 None:intergenic 40.0%
! ATAGTTTATTCTAGGGGGGT+TGG + chr7.1:9376888-9376907 None:intergenic 40.0%
! CTTTGAAGAACTCGCTCTAA+AGG - chr7.1:9376316-9376335 MS.gene007571:intron 40.0%
! TAGTTTATTCTAGGGGGGTT+GGG + chr7.1:9376887-9376906 None:intergenic 40.0%
! TCTTACTATAGAGGAGCACA+AGG - chr7.1:9374482-9374501 MS.gene007571:intron 40.0%
! TTGATTGGTGATTCTGGTGT+TGG - chr7.1:9373740-9373759 MS.gene007571:CDS 40.0%
!! AGTTCTTCTAAGTTGGTCCA+CGG + chr7.1:9375286-9375305 None:intergenic 40.0%
!! TCAGAATATCATGGTGATGG+TGG + chr7.1:9375789-9375808 None:intergenic 40.0%
!!! ACGTTACAAGCTGGTTTTGT+AGG - chr7.1:9375409-9375428 MS.gene007571:intron 40.0%
!!! ATGTCTAGTTTTGAGCGTGA+AGG - chr7.1:9375662-9375681 MS.gene007571:intron 40.0%
!!! CGTTACAAGCTGGTTTTGTA+GGG - chr7.1:9375410-9375429 MS.gene007571:intron 40.0%
!!! GATAAGGTGGCTTCTAGTTT+TGG + chr7.1:9375596-9375615 None:intergenic 40.0%
!!! TAAGGTGGCTTCTAGTTTTG+GGG + chr7.1:9375594-9375613 None:intergenic 40.0%
!!! TGTCTAGTTTTGAGCGTGAA+GGG - chr7.1:9375663-9375682 MS.gene007571:intron 40.0%
AACACCCCAGTTCTTTAGCA+AGG + chr7.1:9376250-9376269 None:intergenic 45.0%
AAGATCAAAACGCTCACGGT+AGG - chr7.1:9374248-9374267 MS.gene007571:intron 45.0%
ACACCCCAGTTCTTTAGCAA+GGG + chr7.1:9376249-9376268 None:intergenic 45.0%
ACATCTCTCACGTTACAAGC+TGG - chr7.1:9375400-9375419 MS.gene007571:intron 45.0%
AGATCAAAACGCTCACGGTA+GGG - chr7.1:9374249-9374268 MS.gene007571:intron 45.0%
AGGCCACATAACATCTCACA+TGG + chr7.1:9375704-9375723 None:intergenic 45.0%
ATGAGTTCATCATCAGGCTC+TGG - chr7.1:9373680-9373699 MS.gene007571:CDS 45.0%
CTATCCACTGACATCTGCTA+GGG - chr7.1:9376174-9376193 MS.gene007571:intron 45.0%
CTTAGCCCTTGCTAAAGAAC+TGG - chr7.1:9376241-9376260 MS.gene007571:intron 45.0%
GATAGTCCAAGGGAGTGATA+AGG + chr7.1:9375612-9375631 None:intergenic 45.0%
GATGACATCCATCAGAATCC+TGG - chr7.1:9375807-9375826 MS.gene007571:intron 45.0%
GCTCCTAGTCTATTGGAAGA+AGG - chr7.1:9377061-9377080 MS.gene007571:CDS 45.0%
GGAGCACAAGGAATCATTCT+CGG - chr7.1:9374494-9374513 MS.gene007571:intron 45.0%
GGCCACATAACATCTCACAT+GGG + chr7.1:9375703-9375722 None:intergenic 45.0%
GTCCCATGTGAGATGTTATG+TGG - chr7.1:9375698-9375717 MS.gene007571:intron 45.0%
TAAACCCTAGCAGATGTCAG+TGG + chr7.1:9376181-9376200 None:intergenic 45.0%
TAGCCCTTGCTAAAGAACTG+GGG - chr7.1:9376243-9376262 MS.gene007571:intron 45.0%
TCGTAAGTATGCTTTAGCCG+TGG - chr7.1:9375266-9375285 MS.gene007571:intron 45.0%
TCTATCCACTGACATCTGCT+AGG - chr7.1:9376173-9376192 MS.gene007571:intron 45.0%
TGAATCTATTGCAGCTGGAC+AGG - chr7.1:9374436-9374455 MS.gene007571:intron 45.0%
! CTTGTCAGAAGTGTGGTCTA+AGG - chr7.1:9374768-9374787 MS.gene007571:intron 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG + chr7.1:9376863-9376882 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG + chr7.1:9376862-9376881 None:intergenic 45.0%
!!! CTAGTTTTGGGGAGGAACAT+AGG + chr7.1:9375583-9375602 None:intergenic 45.0%
!!! GTCTAGTTTTGAGCGTGAAG+GGG - chr7.1:9375664-9375683 MS.gene007571:intron 45.0%
!!! TACAAGCTGGTTTTGTAGGG+TGG - chr7.1:9375413-9375432 MS.gene007571:intron 45.0%
!!! TCTAGTTTTGAGCGTGAAGG+GGG - chr7.1:9375665-9375684 MS.gene007571:intron 45.0%
!!! TGGTTTTGTAGGGTGGTGTT+AGG - chr7.1:9375420-9375439 MS.gene007571:intron 45.0%
!! AAAAAAAAAAAAAAATTAAC+GGG + chr7.1:9375489-9375508 None:intergenic 5.0%
AAGATCCAGGGTTCAAGTCC+CGG + chr7.1:9376818-9376837 None:intergenic 50.0%
AAGCCACCTTATCACTCCCT+TGG - chr7.1:9375603-9375622 MS.gene007571:intron 50.0%
AGTCCAAGGGAGTGATAAGG+TGG + chr7.1:9375609-9375628 None:intergenic 50.0%
ATCAAAACGCTCACGGTAGG+GGG - chr7.1:9374251-9374270 MS.gene007571:intron 50.0%
CTATTGCAGCTGGACAGGAA+AGG - chr7.1:9374441-9374460 MS.gene007571:intron 50.0%
GAGTGCGTGAAGATGCTAGT+TGG - chr7.1:9374817-9374836 MS.gene007571:intron 50.0%
GATCAAAACGCTCACGGTAG+GGG - chr7.1:9374250-9374269 MS.gene007571:intron 50.0%
GATGCTTGTGCATCAACGTC+CGG + chr7.1:9376713-9376732 None:intergenic 50.0%
TTGGGGAGGAACATAGGAGT+TGG + chr7.1:9375577-9375596 None:intergenic 50.0%
! GAATGGTAATGCGACGATCC+AGG + chr7.1:9375828-9375847 None:intergenic 50.0%
AAGGGCTGTGAGCAGAGAAG+AGG - chr7.1:9376217-9376236 MS.gene007571:intron 55.0%
AGGGCTGTGAGCAGAGAAGA+GGG - chr7.1:9376218-9376237 MS.gene007571:intron 55.0%
CAGCTGGACAGGAAAGGTTC+AGG - chr7.1:9374447-9374466 MS.gene007571:intron 55.0%
GCGACGATCCAGGATTCTGA+TGG + chr7.1:9375818-9375837 None:intergenic 55.0%
TCAAAACGCTCACGGTAGGG+GGG - chr7.1:9374252-9374271 MS.gene007571:intron 55.0%
!!! GGTGGCTTCTAGTTTTGGGG+AGG + chr7.1:9375591-9375610 None:intergenic 55.0%
CCAGGGTTCAAGTCCCGGTA+AGG + chr7.1:9376813-9376832 None:intergenic 60.0%
CCTTACCGGGACTTGAACCC+TGG - chr7.1:9376810-9376829 MS.gene007571:intron 60.0%
! TCAGGCTCTGGTCAGAGCAG+TGG - chr7.1:9373692-9373711 MS.gene007571:CDS 60.0%
GGGGGGTTGGGTAGCTCAAC+TGG + chr7.1:9376875-9376894 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 9373680 9377162 9373680 ID=MS.gene007571
chr7.1 mRNA 9373680 9377162 9373680 ID=MS.gene007571.t1;Parent=MS.gene007571
chr7.1 exon 9377015 9377162 9377015 ID=MS.gene007571.t1.exon1;Parent=MS.gene007571.t1
chr7.1 CDS 9377015 9377162 9377015 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
chr7.1 exon 9376537 9376605 9376537 ID=MS.gene007571.t1.exon2;Parent=MS.gene007571.t1
chr7.1 CDS 9376537 9376605 9376537 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
chr7.1 exon 9376327 9376392 9376327 ID=MS.gene007571.t1.exon3;Parent=MS.gene007571.t1
chr7.1 CDS 9376327 9376392 9376327 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
chr7.1 exon 9375987 9376108 9375987 ID=MS.gene007571.t1.exon4;Parent=MS.gene007571.t1
chr7.1 CDS 9375987 9376108 9375987 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
chr7.1 exon 9374505 9374633 9374505 ID=MS.gene007571.t1.exon5;Parent=MS.gene007571.t1
chr7.1 CDS 9374505 9374633 9374505 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
chr7.1 exon 9373680 9373790 9373680 ID=MS.gene007571.t1.exon6;Parent=MS.gene007571.t1
chr7.1 CDS 9373680 9373790 9373680 ID=cds.MS.gene007571.t1;Parent=MS.gene007571.t1
Gene Sequence

>MS.gene007571

ATGAGTTCATCATCAGGCTCTGGTCAGAGCAGTGGCCATGATCTCTCTTTCAAGATCTTGTTGATTGGTGATTCTGGTGTTGGAAAAAGTTGTTTACTTGTCACTTTCATTTCCAGTTCATCTGTTGAAGATCTTTCACCTACCATTGGTATTTACAACTCTCTCATTTCTATTAAATTAATGGTGTCTGCCTCTTGATTCTTGATCTAGCTATTGTTTATAATCACACTGTTCAATTCAAATTCTGAATGTTAAATTAAATTTGTCAATTCAGTTTGTTTCATCATTGAATCTGTTAATTGGCAATATGATGCCATTGTTTAACTGCTCTAATTGCTTTGCTCCTTTTATATAAGTATGTCATTGAATTGTAATTAGCTGTTACCTCAGTGGTAAGATTGATCTTGTAATGTAAAATGATCATTAATATCACTTTAGTTGATAATAATTTTTGCCTTCTCCATTTTGTTTTTTTAAAATGCTCTCATTCCTCAATTATGTTGCTTTTATCTGATTTGAGTTTTCATATGATCTAATGTTGTTGTTATGATCTGTAGGTGTTGATTTTAAGATCAAAACGCTCACGGTAGGGGGGAAAAGATTAAAGCTTACAATTTGGGACACAGGTATATACTATTGTCATAAAATCTTCTGTTTCCCCTTAACGAAATTAGACCTTTGTTCAATCTTAGCAGCATGTAATTCATAGAATTAACCAATTTAATTTAAGTGGTAAGTTGACTTATAAAATAGCATTGAATCTATTGCAGCTGGACAGGAAAGGTTCAGGACTCTAACAAGTTCTTACTATAGAGGAGCACAAGGAATCATTCTCGGTATGCTAATGTGGTTTATGTACATATAGATATCTGTTACATTGTTCTTCCCGAGAAATTGTGGTGTTTATCTTGGGACTAAAGATGGCCTTGTTGTGAAACCATTATTTAGTAATAGTTGAACTGGATAAAGTATGTCTTTCAATTACTGATATAAGTCACTTTTTCTAAAGTTAATGATTTCTATTTATAGAGTGCTTTGTTTTCTCATCTTCTAGTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTGTCAGAAGTGTGGTCTAAGGAATTGGAACTCTATTCAACTAATCAGGAGTGCGTGAAGATGCTAGTTGGAAATAAAGTTGACAAAGTAAGTTTTATGTTCTAATTAGTTAAAATCTTGCATAAGATTGCACGAATGTGTGAAAAATGACAGGAAATAGATGTGTTAAATTCTTCCAGGTTTCATTACCAGAAGACTTTTCTTATAATAGATAGATAGATCATCAAGAAAGTACTAGGTCTGAGTTTATGATTGCCATAGAGAATGAATTTTTGTATTGGATTGGTAGGAAATTGTCTTGAAATATATTTTATTGGATTGGTTGGAAATTGTGGTTTTGATCTTATCCACGTTTAGACAATGAAATAACATTTAAGTTTTGTCTTCCAAGTCTATTTCACCATTCATTAGAATTAATGACAATGAGTCAATGCTCACATTATGAGAAAATTAAGACATTCTCATGATTTCAAAATAATAAATTCAATTCTAACCTATCGTAAGTATGCTTTAGCCGTGGACCAACTTAGAAGAACTTGTCTTTCGTACGGTTTGTATACATGAACATGTTCATACTGTTCAGAGTCTCACATTAGATGTAATATGACCTAAAAGTTTTTATAAGTGGAAGACATCTCTCACGTTACAAGCTGGTTTTGTAGGGTGGTGTTAGGCTCAATCTTAATTTTAAGATGGTATGAAATATTTGTTGGGCCACCCGTTAATTTTTTTTTTTTTTTTAATTACAAATCTTAGTTGTTATTTTGTTAGTAGGGGTGGTTGAATTCATGACCTCCTTATCATTCCAACTCCTATGTTCCTCCCCAAAACTAGAAGCCACCTTATCACTCCCTTGGACTATCTGTTATTGAGCTACTCGGGTCAAGCTCCAAATGTCTAGTTTTGAGCGTGAAGGGGGTGTGTTGAAAGTCCCATGTGAGATGTTATGTGGCCTAAAAGAGTATTTCAAGTAGGAGGCATCCCTTACTTACAATAACATTTCTTCACACTTTTCTGCCACCATCACCATGATATTCTGATGACATCCATCAGAATCCTGGATCGTCGCATTACCATTCAGAATGAATGAAATAAGATATACATTTGTATGTGGCGTGTTTGTGATATTAACACTTGCATTTCAGTGAATATGTAAAGTATTAAACTTCCATTTAGAGGCACTATCATTTGTCTAAGCAACCAACTTGAGACACTTGAGCATATGATTTACAGTTCTACTGGACATTCTGAAACCATTGAAGAACCTTGTGGAGATAGATGATTTTTTGTATTAGGACCTCATTTAGCATAGATGTCATTTACCAATGCACATAGCAATAGCATAAGTTCAAATCATGAATATCTTGCTTACAATGTGAGATTTTCACATGATTGGTGGCTCAGTCTATCCACTGACATCTGCTAGGGTTTATTACTCAGGATTCTGAAAGGGCTGTGAGCAGAGAAGAGGGCTTAGCCCTTGCTAAAGAACTGGGGTGTTTGCTTCTTGAATGTAGTGCTAAAACTCGAGAAAATGTGGAGAAGTGCTTTGAAGAACTCGCTCTAAAGGTACGATTTTATAAGTTTCCTTTGATGATGTTTCTGTCTTGTGCATATTGTTCCAATTAACTGACATTAGGCATTACACTTCACTAAGTTTGTTGGTAGTTTTCTTTGTTTGTAAAACAGTTAGCAATTCTGTTATATGTTCCTTGGATCATTTCTCTCTGTATACTCTATATGTCCTTAGTATATAGTTTTTCAATACATTCATCATTCATTCAATATAAATGAAGAATTCAGAGGAATTTGCTTTTCTCTCACACCCTGTGAGTTCTTACCAAATTAGCATAAGCTTAAATATTGGTTCTAAAAATATAATAACTCAACCGAGAAATCTGCATACAGAAGTATAAGAAGTGTTTTTGTATAATATATTGACCGGACGTTGATGCACAAGCATCTAATAAGAAGCTTACATATTGGTTTTAAAAAGTGCTTATCTACAATTCTACGGCTTTTGTTAAGTTAGTATTTTTCTCCTTACCGGGACTTGAACCCTGGATCTTTAACTTCTCAGCTCATTTACTCCCTTAGCTCAAACCAGTTGAGCTACCCAACCCCCCTAGAATAAACTATCAACTTGGTCCCTGAACTATAGAAATATAATAAGTAGTTGATTAAACAAGGTGTTGATTTTGAGTGAAACTTGTATGGTAAATTGATTGTTGTGTATGTTTTTCTTATCAAATTATGACATACTAGTGGAACACCATTTTGTAGATAATGGAAGCTCCTAGTCTATTGGAAGAAGGATCAGCAGCAACAAAAAGGAATGTCTTAAAACAGAAACAAGAACAACAGTCATCACAAAATGGAGGCTGTTGCTCTTAA
Protein sequence

>MS.gene007571.t1

MSSSSGSGQSSGHDLSFKILLIGDSGVGKSCLLVTFISSSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKDSERAVSREEGLALAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAATKRNVLKQKQEQQSSQNGGCCS