AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011573


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011573.t1 MTR_7g081700 88.119 202 24 0 1 202 1 202 3.33e-137 382
MS.gene011573.t1 MTR_8g006970 87.879 198 23 1 6 202 20 217 8.10e-130 364
MS.gene011573.t1 MTR_4g099470 100.000 173 0 0 30 202 6 178 2.20e-128 358
MS.gene011573.t1 MTR_2g005500 77.778 198 43 1 4 200 5 202 4.19e-116 328
MS.gene011573.t1 MTR_8g006970 88.953 172 19 0 1 172 1 172 4.72e-114 323
MS.gene011573.t1 MTR_1g115325 58.537 205 76 3 4 200 11 214 1.84e-85 251
MS.gene011573.t1 MTR_1g068740 58.654 208 75 4 4 202 11 216 3.25e-85 251
MS.gene011573.t1 MTR_7g100020 59.135 208 74 4 4 202 11 216 7.64e-85 250
MS.gene011573.t1 MTR_1g068730 58.173 208 76 4 4 202 11 216 1.08e-84 249
MS.gene011573.t1 MTR_4g063160 57.488 207 76 5 4 200 11 215 5.98e-81 240
MS.gene011573.t1 MTR_2g005500 58.586 198 41 2 4 200 5 162 9.38e-77 228
MS.gene011573.t1 MTR_2g096550 52.657 207 81 5 5 200 12 212 8.51e-72 217
MS.gene011573.t1 MTR_1g068740 65.101 149 51 1 4 152 11 158 1.69e-68 208
MS.gene011573.t1 MTR_1g068730 64.430 149 52 1 4 152 11 158 2.00e-67 204
MS.gene011573.t1 MTR_4g064897 46.445 211 104 2 1 202 5 215 2.70e-66 203
MS.gene011573.t1 MTR_2g005510 47.619 210 99 3 4 202 11 220 1.82e-63 196
MS.gene011573.t1 MTR_2g027660 45.455 209 102 1 5 201 3 211 8.75e-62 191
MS.gene011573.t1 MTR_6g021790 54.545 165 75 0 5 169 3 167 9.14e-62 191
MS.gene011573.t1 MTR_3g069510 45.794 214 100 3 1 201 5 215 5.54e-61 189
MS.gene011573.t1 MTR_2g075950 46.445 211 103 2 2 202 7 217 7.42e-61 189
MS.gene011573.t1 MTR_8g031660 52.071 169 81 0 5 173 3 171 4.64e-60 187
MS.gene011573.t1 MTR_8g093740 48.259 201 99 4 4 200 9 208 5.96e-60 186
MS.gene011573.t1 MTR_4g088090 45.024 211 106 1 2 202 7 217 2.22e-59 185
MS.gene011573.t1 MTR_2g014990 45.024 211 106 1 2 202 7 217 2.32e-59 185
MS.gene011573.t1 MTR_7g051940 47.059 204 99 1 7 201 12 215 4.14e-59 184
MS.gene011573.t1 MTR_1g078200 46.698 212 97 3 6 201 12 223 4.69e-59 185
MS.gene011573.t1 MTR_3g086980 43.868 212 106 2 2 200 10 221 5.66e-59 184
MS.gene011573.t1 MTR_8g089985 52.632 171 79 2 2 171 11 180 8.80e-59 184
MS.gene011573.t1 MTR_7g103070 47.525 202 101 3 5 201 13 214 1.06e-58 184
MS.gene011573.t1 MTR_4g079350 44.550 211 107 1 2 202 7 217 1.59e-58 183
MS.gene011573.t1 MTR_2g090865 45.498 211 106 1 1 202 4 214 3.46e-58 182
MS.gene011573.t1 MTR_8g031870 50.610 164 81 0 7 170 5 168 8.63e-58 180
MS.gene011573.t1 MTR_2g083860 46.009 213 102 3 2 202 7 218 1.96e-57 181
MS.gene011573.t1 MTR_1g029450 48.768 203 98 4 4 201 13 214 6.47e-57 179
MS.gene011573.t1 MTR_8g027220 43.434 198 112 0 1 198 19 216 1.14e-56 179
MS.gene011573.t1 MTR_3g096350 46.269 201 103 4 4 200 8 207 4.42e-56 177
MS.gene011573.t1 MTR_1g062760 47.264 201 100 5 5 200 11 210 8.69e-56 176
MS.gene011573.t1 MTR_0262s0050 43.128 211 108 2 2 200 9 219 6.34e-55 174
MS.gene011573.t1 MTR_8g031680 48.485 165 85 0 5 169 3 167 1.51e-54 173
MS.gene011573.t1 MTR_6g079550 48.925 186 93 2 1 185 5 189 2.70e-54 172
MS.gene011573.t1 MTR_1g090717 47.549 204 103 4 2 201 9 212 5.53e-54 171
MS.gene011573.t1 MTR_8g036220 47.368 171 90 0 6 176 14 184 1.03e-53 171
MS.gene011573.t1 MTR_1g052475 48.810 168 86 0 2 169 9 176 1.34e-53 171
MS.gene011573.t1 MTR_7g405790 47.126 174 92 0 7 180 14 187 3.37e-52 167
MS.gene011573.t1 MTR_8g107070 54.706 170 75 2 1 169 7 175 5.36e-52 168
MS.gene011573.t1 MTR_3g064390 44.103 195 100 4 10 201 12 200 7.76e-52 166
MS.gene011573.t1 MTR_8g031830 46.591 176 90 1 7 178 5 180 1.84e-51 164
MS.gene011573.t1 MTR_5g076590 42.268 194 105 3 10 201 12 200 3.03e-50 161
MS.gene011573.t1 MTR_8g103550 41.237 194 106 3 10 201 11 198 1.20e-47 155
MS.gene011573.t1 MTR_3g096350 54.225 142 59 4 4 143 8 145 3.97e-47 152
MS.gene011573.t1 MTR_3g096350 57.778 135 50 4 4 136 8 137 6.09e-46 149
MS.gene011573.t1 MTR_7g117910 47.552 143 74 1 6 148 18 159 5.04e-44 146
MS.gene011573.t1 MTR_8g093740 44.118 170 91 3 35 200 6 175 5.83e-44 145
MS.gene011573.t1 MTR_2g102060 38.974 195 111 3 10 202 12 200 2.43e-43 144
MS.gene011573.t1 MTR_1g094220 42.236 161 92 1 10 169 33 193 3.64e-43 143
MS.gene011573.t1 MTR_8g090215 37.056 197 120 1 9 201 10 206 7.30e-43 143
MS.gene011573.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.46e-42 142
MS.gene011573.t1 MTR_5g013900 36.735 196 119 1 9 199 10 205 1.52e-42 142
MS.gene011573.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.64e-42 142
MS.gene011573.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 4.66e-42 142
MS.gene011573.t1 MTR_4g098950 39.752 161 97 0 9 169 10 170 1.30e-41 140
MS.gene011573.t1 MTR_3g087160 41.615 161 94 0 9 169 10 170 2.22e-41 139
MS.gene011573.t1 MTR_2g101890 38.308 201 113 5 8 200 10 207 5.78e-40 135
MS.gene011573.t1 MTR_4g012940 38.308 201 113 5 8 200 8 205 2.38e-39 134
MS.gene011573.t1 MTR_7g103070 45.098 153 79 3 54 201 6 158 8.77e-39 131
MS.gene011573.t1 MTR_4g069850 40.476 168 93 3 8 168 8 175 4.36e-38 130
MS.gene011573.t1 MTR_3g064390 45.669 127 69 0 10 136 12 138 9.78e-37 125
MS.gene011573.t1 MTR_1g097420 37.952 166 96 3 8 166 8 173 6.76e-34 120
MS.gene011573.t1 MTR_8g092020 36.747 166 98 2 8 166 12 177 7.33e-33 117
MS.gene011573.t1 MTR_6g039490 34.804 204 113 6 8 199 8 203 6.75e-30 110
MS.gene011573.t1 MTR_1g097420 35.119 168 100 4 6 166 35 200 4.96e-28 105
MS.gene011573.t1 MTR_4g015220 55.696 79 35 0 122 200 2 80 1.86e-26 97.1
MS.gene011573.t1 MTR_3g107707 30.435 184 119 4 9 188 14 192 2.55e-24 95.9
MS.gene011573.t1 MTR_3g107713 30.435 184 119 4 9 188 14 192 2.58e-24 95.9
MS.gene011573.t1 MTR_3g107717 30.435 184 119 4 9 188 14 192 2.75e-24 95.5
MS.gene011573.t1 MTR_4g088055 31.361 169 102 5 8 164 6 172 6.37e-23 91.7
MS.gene011573.t1 MTR_4g073250 31.737 167 100 5 8 162 6 170 8.67e-23 91.3
MS.gene011573.t1 MTR_6g087980 31.737 167 100 5 8 162 6 170 1.08e-22 91.3
MS.gene011573.t1 MTR_8g075240 31.953 169 101 5 8 164 6 172 3.09e-22 89.7
MS.gene011573.t1 MTR_5g022600 31.361 169 102 5 8 164 6 172 1.57e-21 87.8
MS.gene011573.t1 MTR_1g059590 36.416 173 100 4 5 177 395 557 2.32e-21 91.3
MS.gene011573.t1 MTR_1g059590 36.416 173 100 4 5 177 428 590 2.82e-21 91.3
MS.gene011573.t1 MTR_3g078260 30.220 182 108 6 8 177 8 182 4.57e-21 87.0
MS.gene011573.t1 MTR_2g090875 29.586 169 105 5 8 164 6 172 8.60e-21 85.9
MS.gene011573.t1 MTR_4g113620 30.000 170 97 5 9 173 14 166 2.78e-20 85.1
MS.gene011573.t1 MTR_8g031810 39.048 105 50 1 7 111 5 95 2.98e-20 81.6
MS.gene011573.t1 MTR_3g078260 33.621 116 74 3 8 122 8 121 1.78e-17 75.9
MS.gene011573.t1 MTR_1452s0010 44.286 70 39 0 37 106 10 79 1.94e-16 72.0
MS.gene011573.t1 MTR_5g078090 36.232 138 78 4 9 145 20 148 4.72e-15 70.5
MS.gene011573.t1 MTR_1686s0010 40.000 70 42 0 37 106 10 79 1.22e-13 64.3
MS.gene011573.t1 MTR_5g015370 28.994 169 110 5 9 172 20 183 1.88e-12 63.5
MS.gene011573.t1 MTR_1g069245 41.026 78 45 1 37 114 122 198 7.67e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011573.t1 AT5G47200 90.099 202 20 0 1 202 1 202 1.90e-139 387
MS.gene011573.t1 AT4G17530 89.604 202 21 0 1 202 1 202 1.01e-138 386
MS.gene011573.t1 AT1G02130 87.192 203 25 1 1 202 1 203 2.29e-134 375
MS.gene011573.t1 AT3G11730 75.369 203 47 3 1 200 1 203 2.84e-114 324
MS.gene011573.t1 AT5G59840 59.615 208 73 4 4 202 11 216 1.23e-86 254
MS.gene011573.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene011573.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene011573.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene011573.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene011573.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene011573.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene011573.t1 AT3G09900 58.454 207 76 3 4 201 11 216 5.18e-82 243
MS.gene011573.t1 AT5G03520 59.024 205 76 3 4 201 11 214 2.53e-81 241
MS.gene011573.t1 AT4G17160 48.768 203 96 2 5 200 3 204 1.16e-65 201
MS.gene011573.t1 AT1G07410 45.714 210 106 2 1 202 5 214 1.12e-64 199
MS.gene011573.t1 AT5G47520 49.048 210 94 2 6 202 12 221 1.05e-63 196
MS.gene011573.t1 AT4G35860 45.370 216 92 2 5 201 3 211 1.81e-63 196
MS.gene011573.t1 AT1G09630 47.170 212 100 3 2 202 6 216 8.82e-63 194
MS.gene011573.t1 AT4G17170 46.411 209 100 2 5 201 3 211 3.44e-62 192
MS.gene011573.t1 AT5G45750 47.619 210 101 2 2 202 7 216 8.34e-62 191
MS.gene011573.t1 AT3G46830 44.131 213 108 1 1 202 5 217 3.51e-61 190
MS.gene011573.t1 AT3G46830 44.131 213 108 1 1 202 5 217 3.51e-61 190
MS.gene011573.t1 AT3G15060 48.113 212 98 3 2 202 7 217 4.36e-61 190
MS.gene011573.t1 AT5G03520 54.819 166 67 3 43 201 40 204 1.33e-60 188
MS.gene011573.t1 AT5G60860 45.972 211 104 1 2 202 7 217 1.67e-60 188
MS.gene011573.t1 AT1G28550 47.393 211 98 3 4 202 9 218 2.02e-60 188
MS.gene011573.t1 AT4G18430 45.714 210 104 1 2 201 7 216 2.12e-60 188
MS.gene011573.t1 AT3G07410 48.309 207 96 3 6 201 10 216 2.49e-60 188
MS.gene011573.t1 AT5G59150 42.723 213 111 1 1 202 5 217 2.93e-60 187
MS.gene011573.t1 AT1G16920 47.596 208 100 2 4 202 9 216 3.07e-60 187
MS.gene011573.t1 AT1G06400 45.238 210 106 2 2 202 7 216 4.17e-60 187
MS.gene011573.t1 AT4G39990 46.190 210 99 4 6 202 15 223 4.33e-60 187
MS.gene011573.t1 AT2G33870 46.919 211 99 3 4 202 9 218 1.60e-59 186
MS.gene011573.t1 AT5G47960 44.186 215 107 3 1 202 8 222 3.22e-59 185
MS.gene011573.t1 AT5G65270 45.540 213 99 5 6 202 15 226 6.42e-59 184
MS.gene011573.t1 AT4G18800 45.673 208 106 2 2 202 7 214 1.07e-58 184
MS.gene011573.t1 AT1G05810 44.231 208 105 2 6 202 10 217 4.98e-56 177
MS.gene011573.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene011573.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene011573.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene011573.t1 AT1G05810 44.231 208 105 2 6 202 56 263 1.04e-55 177
MS.gene011573.t1 AT5G03530 48.515 202 98 4 5 201 10 210 1.95e-55 175
MS.gene011573.t1 AT5G03530 48.515 202 98 4 5 201 10 210 1.95e-55 175
MS.gene011573.t1 AT2G43130 44.608 204 105 2 6 201 10 213 2.36e-55 175
MS.gene011573.t1 AT3G12160 42.654 211 109 2 2 200 9 219 4.64e-55 174
MS.gene011573.t1 AT1G18200 46.798 203 98 1 2 194 7 209 7.92e-55 174
MS.gene011573.t1 AT1G73640 48.691 191 93 2 4 190 9 198 9.22e-54 172
MS.gene011573.t1 AT2G31680 43.062 209 107 2 6 202 10 218 1.09e-53 171
MS.gene011573.t1 AT1G01200 43.781 201 110 2 1 198 21 221 1.67e-51 166
MS.gene011573.t1 AT4G19640 41.969 193 107 2 10 201 12 200 2.79e-48 157
MS.gene011573.t1 AT5G45130 41.538 195 105 4 10 201 12 200 4.06e-46 151
MS.gene011573.t1 AT3G54840 43.353 173 92 3 10 181 35 202 9.37e-45 147
MS.gene011573.t1 AT3G09910 45.405 185 97 4 5 187 10 192 1.14e-44 147
MS.gene011573.t1 AT3G09910 45.405 185 97 4 5 187 10 192 1.14e-44 147
MS.gene011573.t1 AT5G45130 40.933 193 105 4 12 201 22 208 1.58e-44 147
MS.gene011573.t1 AT2G44610 37.879 198 118 1 9 201 10 207 2.05e-44 147
MS.gene011573.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene011573.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene011573.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene011573.t1 AT3G54840 43.023 172 92 3 11 181 2 168 2.37e-44 145
MS.gene011573.t1 AT3G54840 44.805 154 84 1 10 162 35 188 5.85e-44 145
MS.gene011573.t1 AT4G35860 42.105 171 73 2 50 201 2 165 1.34e-42 141
MS.gene011573.t1 AT2G22290 38.191 199 115 3 9 201 10 206 6.04e-42 140
MS.gene011573.t1 AT5G10260 36.041 197 121 1 9 200 10 206 5.92e-41 138
MS.gene011573.t1 AT1G52280 39.500 200 110 5 8 199 8 204 8.68e-41 137
MS.gene011573.t1 AT4G39890 41.975 162 93 1 9 169 10 171 1.07e-40 137
MS.gene011573.t1 AT5G59150 39.634 164 88 1 50 202 3 166 1.66e-40 135
MS.gene011573.t1 AT3G18820 42.857 168 89 3 8 168 8 175 3.01e-40 136
MS.gene011573.t1 AT3G16100 38.500 200 112 5 8 199 8 204 1.34e-39 134
MS.gene011573.t1 AT5G64990 39.759 166 100 0 9 174 8 173 1.85e-38 132
MS.gene011573.t1 AT4G19640 45.802 131 71 0 10 140 12 142 1.96e-37 129
MS.gene011573.t1 AT1G49300 37.000 200 115 5 8 199 8 204 3.19e-37 129
MS.gene011573.t1 AT1G49300 37.000 200 115 5 8 199 8 204 3.19e-37 129
MS.gene011573.t1 AT2G21880 39.157 166 94 3 8 166 9 174 1.50e-36 127
MS.gene011573.t1 AT4G19640 46.400 125 67 0 10 134 12 136 2.07e-36 124
MS.gene011573.t1 AT5G64990 38.150 173 100 1 9 174 8 180 1.13e-35 125
MS.gene011573.t1 AT1G22740 35.784 204 109 5 8 199 8 201 1.52e-35 124
MS.gene011573.t1 AT4G09720 39.759 166 93 3 8 166 8 173 6.89e-34 120
MS.gene011573.t1 AT4G09720 37.427 171 95 3 8 166 8 178 7.14e-32 115
MS.gene011573.t1 AT5G39620 40.000 165 92 4 9 166 6 170 1.65e-31 114
MS.gene011573.t1 AT4G09720 36.158 177 95 3 8 166 8 184 6.85e-31 112
MS.gene011573.t1 AT2G21880 40.146 137 75 3 37 166 13 149 1.02e-28 106
MS.gene011573.t1 AT2G21880 40.146 137 75 3 37 166 13 149 1.02e-28 106
MS.gene011573.t1 AT2G21880 34.337 166 94 4 8 166 9 166 1.15e-26 101
MS.gene011573.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene011573.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene011573.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene011573.t1 AT2G44690 34.132 167 96 5 8 162 18 182 4.00e-25 97.8
MS.gene011573.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene011573.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene011573.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene011573.t1 AT5G55190 30.435 184 119 4 9 188 14 192 2.65e-24 95.9
MS.gene011573.t1 AT4G28950 33.333 165 98 5 8 162 6 168 2.91e-24 95.5
MS.gene011573.t1 AT5G20020 28.796 191 129 3 9 195 14 201 3.79e-24 95.5
MS.gene011573.t1 AT5G55080 30.864 162 107 4 9 169 14 171 3.92e-24 95.5
MS.gene011573.t1 AT5G20010 31.056 161 108 2 9 169 14 171 4.99e-24 95.1
MS.gene011573.t1 AT3G51300 32.934 167 98 5 10 164 8 172 1.21e-23 93.6
MS.gene011573.t1 AT1G75840 32.544 169 100 5 8 164 6 172 3.53e-23 92.0
MS.gene011573.t1 AT2G17800 32.544 169 100 5 8 164 6 172 6.68e-23 91.7
MS.gene011573.t1 AT2G17800 32.544 169 100 5 8 164 6 172 6.68e-23 91.7
MS.gene011573.t1 AT4G35950 32.544 169 100 5 8 164 6 172 9.68e-23 91.3
MS.gene011573.t1 AT5G45970 30.539 167 102 5 8 162 6 170 4.60e-22 89.4
MS.gene011573.t1 AT5G46025 40.187 107 63 1 70 175 6 112 5.85e-22 86.7
MS.gene011573.t1 AT1G20090 31.361 169 102 5 8 164 5 171 1.33e-21 88.2
MS.gene011573.t1 AT3G48040 30.178 169 104 5 8 164 8 174 1.09e-20 85.9
MS.gene011573.t1 AT5G62880 29.885 174 108 5 8 169 8 179 6.44e-20 84.0
MS.gene011573.t1 AT3G48040 33.333 123 79 3 8 129 8 128 3.88e-19 81.3
MS.gene011573.t1 AT5G62880 34.146 123 78 3 8 129 8 128 5.94e-19 80.9
MS.gene011573.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.39e-18 78.2
MS.gene011573.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.39e-18 78.2
MS.gene011573.t1 AT5G67560 33.962 159 95 5 9 162 20 173 3.76e-14 68.2
MS.gene011573.t1 AT5G37680 34.058 138 81 4 9 145 20 148 4.04e-14 68.2
MS.gene011573.t1 AT3G49870 31.609 174 99 6 9 172 1 164 4.78e-14 67.4
MS.gene011573.t1 AT3G51290 32.394 142 82 5 35 164 634 773 4.93e-14 70.5
MS.gene011573.t1 AT3G49870 32.759 174 97 7 9 172 20 183 1.54e-13 66.2
MS.gene011573.t1 AT3G22950 31.298 131 76 5 1 127 12 132 1.54e-11 60.8
MS.gene011573.t1 AT3G22950 31.298 131 76 5 1 127 12 132 1.54e-11 60.8
MS.gene011573.t1 AT3G49860 28.205 156 104 4 9 160 12 163 1.87e-11 60.5
MS.gene011573.t1 AT5G37680 35.780 109 60 4 38 145 2 101 3.44e-11 58.9

Find 46 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTGGTTGTCCTCGAATT+TGG 0.168291 8.4:+23558926 None:intergenic
ACTTACAATTTGAAGTTTAA+TGG 0.206147 8.4:+23560116 None:intergenic
CCTCGAATTTGGACTGTTGC+AGG 0.237144 8.4:+23558937 None:intergenic
CAGGCATTTGCAGATGAAAT+TGG 0.240708 8.4:-23559217 MS.gene011573:CDS
CTGCTGGTCAAGAACGTTTC+CGG 0.274066 8.4:-23559643 MS.gene011573:CDS
AGAGTTGAGACTTACTATTC+AGG 0.317299 8.4:+23562375 None:intergenic
TGAAATTGGAATTCCTTTCA+TGG 0.332549 8.4:-23559203 MS.gene011573:CDS
CAATGTGGAACAAGCTTTCA+TGG 0.386569 8.4:-23559158 MS.gene011573:CDS
TAACATTGTTAAAGCTCTCT+TGG 0.389666 8.4:+23559464 None:intergenic
ACGAGCAGCAACCAGCCTTC+TGG 0.395079 8.4:+23558902 None:intergenic
GCAGGCCTGGCACTGTTGGC+AGG 0.403801 8.4:+23558955 None:intergenic
AATTTGGACTGTTGCAGGCC+TGG 0.409513 8.4:+23558942 None:intergenic
AATGTTAACAAGCTTCTAGT+TGG 0.417837 8.4:-23559403 MS.gene011573:CDS
TGTTGCAGGCCTGGCACTGT+TGG 0.432139 8.4:+23558951 None:intergenic
CAACCAGCCTTCTGGTTCAC+TGG 0.436527 8.4:+23558910 None:intergenic
GAAAATCCGCACTGTTGAGC+AGG 0.471772 8.4:-23560148 MS.gene011573:CDS
GTCAACCTGCCAACAGTGCC+AGG 0.473985 8.4:-23558960 MS.gene011573:CDS
AGCTACTATCGTGGGGCTCA+TGG 0.480037 8.4:-23559608 MS.gene011573:CDS
GAAAGCTTGTTCCACATTGG+AGG 0.502915 8.4:+23559162 None:intergenic
TTGATTGGAGATTCTGGTGT+GGG 0.506444 8.4:-23560816 MS.gene011573:CDS
ATTGTATAGTGGGACACTGC+TGG 0.512939 8.4:-23559659 MS.gene011573:intron
TCCGCACTGTTGAGCAGGAT+GGG 0.520866 8.4:-23560143 MS.gene011573:CDS
TTAGCACTAGTTTCCATGAA+AGG 0.524383 8.4:+23559190 None:intergenic
ATCCGCACTGTTGAGCAGGA+TGG 0.528930 8.4:-23560144 MS.gene011573:CDS
AATCACCTTTGCTGTTTCAG+AGG 0.533991 8.4:+23559345 None:intergenic
AGTAGCTGCTAGTTATAGTC+CGG 0.542099 8.4:+23559624 None:intergenic
TAACTAGCAGCTACTATCGT+GGG 0.548282 8.4:-23559616 MS.gene011573:CDS
GACAGCTATATCAGTACCAT+CGG 0.567693 8.4:-23560271 MS.gene011573:CDS
CAGAACTTACAGCAAACCTC+AGG 0.568006 8.4:+23560778 None:intergenic
TGGAAACAAGAGCGATCTCT+CGG 0.568213 8.4:-23559383 MS.gene011573:CDS
GCAAGTCATGTCTCCTCCTG+AGG 0.576917 8.4:-23560794 MS.gene011573:CDS
TGGTACTGATATAGCTGTCA+AGG 0.577148 8.4:+23560275 None:intergenic
CCTGCAACAGTCCAAATTCG+AGG 0.584589 8.4:-23558937 MS.gene011573:CDS
CATGAAAGCTTGTTCCACAT+TGG 0.594293 8.4:+23559159 None:intergenic
CAACCAGTGAACCAGAAGGC+TGG 0.595916 8.4:-23558913 MS.gene011573:CDS
GGAACAAGCTTTCATGGCCA+TGG 0.601950 8.4:-23559152 MS.gene011573:CDS
GTTGATTGGAGATTCTGGTG+TGG 0.609925 8.4:-23560817 MS.gene011573:CDS
AACTTACAGCAAACCTCAGG+AGG 0.618028 8.4:+23560781 None:intergenic
ATAACTAGCAGCTACTATCG+TGG 0.626182 8.4:-23559617 MS.gene011573:CDS
GCTTACAAAGTCCACTCCGA+TGG 0.633467 8.4:+23560255 None:intergenic
GCTTTAACAATGTTAAGCAG+TGG 0.636327 8.4:-23559456 MS.gene011573:CDS
TGTGTCCTCTGAAACAGCAA+AGG 0.645238 8.4:-23559350 MS.gene011573:intron
TCCCATCCTGCTCAACAGTG+CGG 0.647894 8.4:+23560142 None:intergenic
AACTAGCAGCTACTATCGTG+GGG 0.674225 8.4:-23559615 MS.gene011573:CDS
CTATATCAGTACCATCGGAG+TGG 0.681244 8.4:-23560266 MS.gene011573:CDS
AGGACAACCAGTGAACCAGA+AGG 0.685270 8.4:-23558917 MS.gene011573:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAACAG+AGG + chr8.4:23560528-23560547 None:intergenic 10.0%
!! AAAATGTAATAGTAAAAAAT+GGG + chr8.4:23560610-23560629 None:intergenic 10.0%
!!! AAGAATCATAATTATTTTAT+GGG + chr8.4:23560249-23560268 None:intergenic 10.0%
!!! ATTAAAATTTAAAATAAGAC+AGG + chr8.4:23558990-23559009 None:intergenic 10.0%
!! AATAATATCATATCTTTGAT+TGG - chr8.4:23560396-23560415 MS.gene011573:intron 15.0%
!! ACATCAAAATATTAGATTAA+AGG + chr8.4:23562024-23562043 None:intergenic 15.0%
!! ATAATATCATATCTTTGATT+GGG - chr8.4:23560397-23560416 MS.gene011573:intron 15.0%
!! GAAAATGTAATAGTAAAAAA+TGG + chr8.4:23560611-23560630 None:intergenic 15.0%
!! TAGGTTTAAAAATTTATTAG+AGG - chr8.4:23559644-23559663 MS.gene011573:CDS 15.0%
!!! CAAGAATCATAATTATTTTA+TGG + chr8.4:23560250-23560269 None:intergenic 15.0%
!!! CTTTTTAAATTTTTTTTTGC+AGG - chr8.4:23561772-23561791 MS.gene011573:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr8.4:23559379-23559398 None:intergenic 15.0%
!!! TTGTTTTATGATTGAATTTA+GGG - chr8.4:23559473-23559492 MS.gene011573:CDS 15.0%
!!! TTTTAAACCTATTAACTTTA+GGG + chr8.4:23559635-23559654 None:intergenic 15.0%
!!! TTTTTAAACCTATTAACTTT+AGG + chr8.4:23559636-23559655 None:intergenic 15.0%
!! AACATGGAAATAAGTTTAAA+TGG + chr8.4:23561061-23561080 None:intergenic 20.0%
!! AACTAAACATGATAACTAAA+CGG + chr8.4:23559191-23559210 None:intergenic 20.0%
!! ACTTCATAAAATATCATTCA+AGG + chr8.4:23560930-23560949 None:intergenic 20.0%
!! AGTTGAATATAAAGAACATA+TGG - chr8.4:23560637-23560656 MS.gene011573:intron 20.0%
!! ATAAGTTTAAATGGTAGATA+TGG + chr8.4:23561052-23561071 None:intergenic 20.0%
!! CAAAATATTAGATTAAAGGA+AGG + chr8.4:23562020-23562039 None:intergenic 20.0%
!! TAATATCATATCTTTGATTG+GGG - chr8.4:23560398-23560417 MS.gene011573:intron 20.0%
!! TATGTTAAAAAATGTTGTAC+AGG - chr8.4:23559783-23559802 MS.gene011573:intron 20.0%
!! TTATATGTCCATTTGATAAA+TGG - chr8.4:23561410-23561429 MS.gene011573:intron 20.0%
!! TTCTTAAAATTGATACACAT+GGG - chr8.4:23559335-23559354 MS.gene011573:intron 20.0%
!! TTGATTTCCTAATATTCAAT+GGG + chr8.4:23561511-23561530 None:intergenic 20.0%
!! TTTAGATGTAGAAAACAAAT+TGG + chr8.4:23561275-23561294 None:intergenic 20.0%
!! TTTCTTAAAATTGATACACA+TGG - chr8.4:23559334-23559353 MS.gene011573:intron 20.0%
!!! AACATTCTCCTTATTTTATA+AGG + chr8.4:23560063-23560082 None:intergenic 20.0%
!!! ACTTACAATTTGAAGTTTAA+TGG + chr8.4:23561165-23561184 None:intergenic 20.0%
!!! ATTGATTTCCTAATATTCAA+TGG + chr8.4:23561512-23561531 None:intergenic 20.0%
!!! GCATTTTTTTATTGTATAGT+GGG - chr8.4:23561609-23561628 MS.gene011573:intron 20.0%
!!! GTTGTTTTATGATTGAATTT+AGG - chr8.4:23559472-23559491 MS.gene011573:CDS 20.0%
!!! TGCATTTTTTTATTGTATAG+TGG - chr8.4:23561608-23561627 MS.gene011573:intron 20.0%
!!! TTGAATGATATTTTATGAAG+TGG - chr8.4:23560929-23560948 MS.gene011573:intron 20.0%
!!! TTTAAATCGAAATTTTGTCT+TGG + chr8.4:23560186-23560205 None:intergenic 20.0%
!!! TTTACTTTTTATCTTATGCA+TGG - chr8.4:23559089-23559108 MS.gene011573:intron 20.0%
!!! TTTTTTTCCTTCTTTAGTTA+TGG - chr8.4:23560545-23560564 MS.gene011573:intron 20.0%
! AAAACAACACTTATGAATGA+AGG + chr8.4:23559460-23559479 None:intergenic 25.0%
! AAAGTTACCCATTGAATATT+AGG - chr8.4:23561501-23561520 MS.gene011573:intron 25.0%
! AATACTGAACAAGTTGTTAT+TGG - chr8.4:23561209-23561228 MS.gene011573:intron 25.0%
! AATCAATTTCTTGTCTTCAT+TGG - chr8.4:23560032-23560051 MS.gene011573:intron 25.0%
! ATAGTCACTGAAAATAAGAT+AGG + chr8.4:23560427-23560446 None:intergenic 25.0%
! ATTATAGACTAGAACTCATT+TGG - chr8.4:23560310-23560329 MS.gene011573:intron 25.0%
! CATATTCATTGATCTATCTA+TGG + chr8.4:23559588-23559607 None:intergenic 25.0%
! CATTTGAACAGTATTATTTG+AGG - chr8.4:23561474-23561493 MS.gene011573:intron 25.0%
! TAAATGATGTCCTATATATG+TGG - chr8.4:23559884-23559903 MS.gene011573:intron 25.0%
! TACTAAAGTTGAAAACAACA+TGG + chr8.4:23561077-23561096 None:intergenic 25.0%
! TGGTAGATCCTTATAAAATA+AGG - chr8.4:23560052-23560071 MS.gene011573:intron 25.0%
! TTATAGACTAGAACTCATTT+GGG - chr8.4:23560311-23560330 MS.gene011573:intron 25.0%
!! AAATGAGTTCTAGTCTATAA+TGG + chr8.4:23560311-23560330 None:intergenic 25.0%
!! AATGATATTTTATGAAGTGG+AGG - chr8.4:23560932-23560951 MS.gene011573:intron 25.0%
!! AATTGTGAGTCTTTTTAAAC+CGG - chr8.4:23561696-23561715 MS.gene011573:intron 25.0%
!! AATTTCCTTTTCAAACACTT+CGG - chr8.4:23561529-23561548 MS.gene011573:intron 25.0%
!! AGAGATGTTCAATTTTCATA+AGG - chr8.4:23559263-23559282 MS.gene011573:intron 25.0%
!! ATTCTCTTTAGGAAAAAGAT+AGG - chr8.4:23560365-23560384 MS.gene011573:intron 25.0%
!! ATTGGCAAGCTTTTATAAAA+AGG - chr8.4:23560119-23560138 MS.gene011573:intron 25.0%
!! ATTTCCTTTTTACATTGTCT+TGG - chr8.4:23561732-23561751 MS.gene011573:intron 25.0%
!! TATCTTTTTCCTAAAGAGAA+TGG + chr8.4:23560366-23560385 None:intergenic 25.0%
!! TTATAAAAGCTTGCCAATTT+TGG + chr8.4:23560117-23560136 None:intergenic 25.0%
!! TTTCCTTTTTACATTGTCTT+GGG - chr8.4:23561733-23561752 MS.gene011573:intron 25.0%
!! TTTTTAACATATATCCCACA+TGG + chr8.4:23559774-23559793 None:intergenic 25.0%
!! TTTTTCTTTTTCTGTGAAAC+AGG - chr8.4:23560970-23560989 MS.gene011573:intron 25.0%
!!! AGGAAAGAATTAATTTGTGA+CGG + chr8.4:23558970-23558989 None:intergenic 25.0%
AAAAAAAATGTCACTGGAAG+TGG + chr8.4:23561993-23562012 None:intergenic 30.0%
AAAAAAATGTCACTGGAAGT+GGG + chr8.4:23561992-23562011 None:intergenic 30.0%
AAAAAATGTTGTACAGGTCA+TGG - chr8.4:23559789-23559808 MS.gene011573:intron 30.0%
AAAAAGGAAATTGCTGACAA+AGG + chr8.4:23561723-23561742 None:intergenic 30.0%
AAAAATGTTGTACAGGTCAT+GGG - chr8.4:23559790-23559809 MS.gene011573:intron 30.0%
AAAAGGAAATTGCTGACAAA+GGG + chr8.4:23561722-23561741 None:intergenic 30.0%
AAATGATCCAAGAACACAAT+TGG + chr8.4:23561459-23561478 None:intergenic 30.0%
AAGATGACCATAACTAAAGA+AGG + chr8.4:23560555-23560574 None:intergenic 30.0%
AATGTTAACAAGCTTCTAGT+TGG - chr8.4:23561875-23561894 MS.gene011573:intron 30.0%
ATGATGTCTTGAGTAAAATG+TGG - chr8.4:23559605-23559624 MS.gene011573:CDS 30.0%
ATTGGTTAAGCAACCAAAAT+TGG - chr8.4:23560101-23560120 MS.gene011573:intron 30.0%
GCTGAAATTAAAAACAGGTA+TGG - chr8.4:23562151-23562170 MS.gene011573:intron 30.0%
GGACTTAAAAAAAATGTCAC+TGG + chr8.4:23561999-23562018 None:intergenic 30.0%
GTAAATGAGGTTAATAACCA+CGG + chr8.4:23562266-23562285 None:intergenic 30.0%
TAAAATTGATACACATGGGA+TGG - chr8.4:23559339-23559358 MS.gene011573:intron 30.0%
TAACATTGTTAAAGCTCTCT+TGG + chr8.4:23561817-23561836 None:intergenic 30.0%
TATGGAATTTCTGTGTGTAA+AGG - chr8.4:23562169-23562188 MS.gene011573:intron 30.0%
TCCTCAAATAAAACTTCTCA+TGG + chr8.4:23561365-23561384 None:intergenic 30.0%
TCTTGACCATAAACAATGTA+AGG - chr8.4:23560751-23560770 MS.gene011573:intron 30.0%
TGAAATTGGAATTCCTTTCA+TGG - chr8.4:23562075-23562094 MS.gene011573:intron 30.0%
TTTCCCAAGACAATGTAAAA+AGG + chr8.4:23561739-23561758 None:intergenic 30.0%
! AATTGGTAACTGGAAAAACT+TGG + chr8.4:23561442-23561461 None:intergenic 30.0%
! CAGTATCTATTGACTAAACA+AGG + chr8.4:23562238-23562257 None:intergenic 30.0%
! GAAATACTTTTGTCCATTAG+AGG + chr8.4:23559733-23559752 None:intergenic 30.0%
! GAACATATGGATGTGTTTTT+AGG - chr8.4:23560650-23560669 MS.gene011573:intron 30.0%
! GTCTTTTGTAATCTTGTACT+GGG - chr8.4:23559703-23559722 MS.gene011573:intron 30.0%
! TAAACCTATTAACTTTAGGG+AGG + chr8.4:23559632-23559651 None:intergenic 30.0%
! TAACATTTTCACTTGCATAG+CGG + chr8.4:23561862-23561881 None:intergenic 30.0%
! TCTTTTGTAATCTTGTACTG+GGG - chr8.4:23559704-23559723 MS.gene011573:intron 30.0%
! TGTCTTTTGTAATCTTGTAC+TGG - chr8.4:23559702-23559721 MS.gene011573:intron 30.0%
! TTGATTATGTGATCCACTTT+TGG - chr8.4:23559235-23559254 MS.gene011573:intron 30.0%
! TTGTTCAAGCTTTTGTTGAT+TGG - chr8.4:23560447-23560466 MS.gene011573:intron 30.0%
!! ATTTTCTAAAGAAGGAAGCA+TGG + chr8.4:23561116-23561135 None:intergenic 30.0%
!! GGAAAGAATTAATTTGTGAC+GGG + chr8.4:23558969-23558988 None:intergenic 30.0%
!! TCTATAGTTTGTTTCTTCCA+CGG - chr8.4:23559527-23559546 MS.gene011573:intron 30.0%
!! TTAATTTGTGACGGGAAATT+TGG + chr8.4:23558961-23558980 None:intergenic 30.0%
!!! GTCATTTTTATGTGAGAAGA+AGG + chr8.4:23560861-23560880 None:intergenic 30.0%
!!! TCCATGAGAAGTTTTATTTG+AGG - chr8.4:23561361-23561380 MS.gene011573:intron 30.0%
ACATCTCTTGAAACCAAAAG+TGG + chr8.4:23559251-23559270 None:intergenic 35.0%
ACATTGTCTTGGGAAAACAA+TGG - chr8.4:23561743-23561762 MS.gene011573:intron 35.0%
AGAGTTGAGACTTACTATTC+AGG + chr8.4:23558906-23558925 None:intergenic 35.0%
AGATCCGTTTAATTAGTCGA+TGG - chr8.4:23559163-23559182 MS.gene011573:CDS 35.0%
ATGTACGATGCCACATATAT+AGG + chr8.4:23559897-23559916 None:intergenic 35.0%
CCATAAACAATGTAAGGTCA+AGG - chr8.4:23560757-23560776 MS.gene011573:intron 35.0%
CCTTGACCTTACATTGTTTA+TGG + chr8.4:23560760-23560779 None:intergenic 35.0%
CTATTTGTGGTTTGATCGAA+CGG - chr8.4:23560824-23560843 MS.gene011573:CDS 35.0%
GCAAAACATGACTGTCTAAA+AGG + chr8.4:23559926-23559945 None:intergenic 35.0%
GCTTTAACAATGTTAAGCAG+TGG - chr8.4:23561822-23561841 MS.gene011573:intron 35.0%
GGAATGAGCCATTTATCAAA+TGG + chr8.4:23561421-23561440 None:intergenic 35.0%
GTAAATGCATGTGAACTCTA+AGG - chr8.4:23559285-23559304 MS.gene011573:intron 35.0%
TAAACGGATCTAAATCAGCA+AGG + chr8.4:23559154-23559173 None:intergenic 35.0%
TATATGCACCAGAGAGTAAA+AGG - chr8.4:23560722-23560741 MS.gene011573:intron 35.0%
TGCATGACTTCAATCAATCT+AGG - chr8.4:23559845-23559864 MS.gene011573:intron 35.0%
TGGCTGCTGAAATTAAAAAC+AGG - chr8.4:23562146-23562165 MS.gene011573:intron 35.0%
! CCATTCTGTGAAAAAAGTAC+CGG + chr8.4:23562295-23562314 None:intergenic 35.0%
! GATTTACTCCTTTTACTCTC+TGG + chr8.4:23560733-23560752 None:intergenic 35.0%
! GGATCCATCGACTAATTAAA+CGG + chr8.4:23559170-23559189 None:intergenic 35.0%
! TGGATTGTGAAATTTGCTCA+TGG - chr8.4:23559109-23559128 MS.gene011573:intron 35.0%
! TTAGCACTAGTTTCCATGAA+AGG + chr8.4:23562091-23562110 None:intergenic 35.0%
!! AGGCATTGAAAAAGTGTGTA+TGG - chr8.4:23560670-23560689 MS.gene011573:intron 35.0%
!! CTCTGAGTTGAAAAAGCATT+CGG + chr8.4:23559504-23559523 None:intergenic 35.0%
!! CTTTTGTTGATTGGAGATTC+TGG - chr8.4:23560456-23560475 MS.gene011573:intron 35.0%
!! TATTGGTTCTGAACTCTGAT+GGG - chr8.4:23561226-23561245 MS.gene011573:intron 35.0%
!! TTATTGGTTCTGAACTCTGA+TGG - chr8.4:23561225-23561244 MS.gene011573:intron 35.0%
!!! GTTTTTAATTTCAGCAGCCA+TGG + chr8.4:23562146-23562165 None:intergenic 35.0%
AAAGCTAGTGAAGTCCATGT+GGG - chr8.4:23559757-23559776 MS.gene011573:intron 40.0%
AACACTTCGGCTCAATTATC+TGG - chr8.4:23561542-23561561 MS.gene011573:intron 40.0%
ACACTTCGGCTCAATTATCT+GGG - chr8.4:23561543-23561562 MS.gene011573:intron 40.0%
AGAGAATGGCCATAGCAAAA+TGG + chr8.4:23560352-23560371 None:intergenic 40.0%
AGTAGCTGCTAGTTATAGTC+CGG + chr8.4:23561657-23561676 None:intergenic 40.0%
ATAACTAGCAGCTACTATCG+TGG - chr8.4:23561661-23561680 MS.gene011573:intron 40.0%
CAATAGATACTGATCTACCG+TGG - chr8.4:23562246-23562265 MS.gene011573:intron 40.0%
CAATGTGGAACAAGCTTTCA+TGG - chr8.4:23562120-23562139 MS.gene011573:intron 40.0%
CAGAGTCACATCTCTATTTG+TGG - chr8.4:23560811-23560830 MS.gene011573:CDS 40.0%
CAGGCATTTGCAGATGAAAT+TGG - chr8.4:23562061-23562080 MS.gene011573:intron 40.0%
CCAGTTACCAATTGTGTTCT+TGG - chr8.4:23561449-23561468 MS.gene011573:intron 40.0%
GACAGCTATATCAGTACCAT+CGG - chr8.4:23561007-23561026 MS.gene011573:intron 40.0%
GAGAATGGCCATAGCAAAAT+GGG + chr8.4:23560351-23560370 None:intergenic 40.0%
GATAATGTAATCACGTGTGC+CGG - chr8.4:23559399-23559418 MS.gene011573:CDS 40.0%
GCAAATGCCTGATGTACAAA+AGG + chr8.4:23562052-23562071 None:intergenic 40.0%
TAAAGCTAGTGAAGTCCATG+TGG - chr8.4:23559756-23559775 MS.gene011573:intron 40.0%
TAACTAGCAGCTACTATCGT+GGG - chr8.4:23561662-23561681 MS.gene011573:intron 40.0%
TACATAGTGAGATTGTGAGC+AGG - chr8.4:23560698-23560717 MS.gene011573:intron 40.0%
TGCGCAGATCTAACTAAACA+AGG + chr8.4:23559026-23559045 None:intergenic 40.0%
TGCTAAAAATGCCTCCAATG+TGG - chr8.4:23562105-23562124 MS.gene011573:intron 40.0%
TGGAAGTGGGACATGTATAT+GGG + chr8.4:23561979-23561998 None:intergenic 40.0%
TGGTCCTCCCTAAAGTTAAT+AGG - chr8.4:23559625-23559644 MS.gene011573:CDS 40.0%
TTGATTGGAGATTCTGGTGT+GGG - chr8.4:23560462-23560481 MS.gene011573:intron 40.0%
TTGCTATGGCCATTCTCTTT+AGG - chr8.4:23560354-23560373 MS.gene011573:intron 40.0%
! CATGAAAGCTTGTTCCACAT+TGG + chr8.4:23562122-23562141 None:intergenic 40.0%
! CCAAGAACACAATTGGTAAC+TGG + chr8.4:23561452-23561471 None:intergenic 40.0%
! CTTATGAATGAAGGTGTGTC+TGG + chr8.4:23559451-23559470 None:intergenic 40.0%
! GTTTGTGCCTTTTGTACATC+AGG - chr8.4:23562042-23562061 MS.gene011573:intron 40.0%
! TTCTTCCACGGTTGGTATAA+GGG - chr8.4:23559539-23559558 MS.gene011573:intron 40.0%
! TTGAGCCGAAGTGTTTGAAA+AGG + chr8.4:23561537-23561556 None:intergenic 40.0%
! TTTCTTCCACGGTTGGTATA+AGG - chr8.4:23559538-23559557 MS.gene011573:intron 40.0%
!! AATCACCTTTGCTGTTTCAG+AGG + chr8.4:23561936-23561955 None:intergenic 40.0%
!! CAGTGCGGATTTTCTAAAGA+AGG + chr8.4:23561124-23561143 None:intergenic 40.0%
!! GGAGAAGTGTTAAGCAGAAA+AGG + chr8.4:23558940-23558959 None:intergenic 40.0%
!! TAGTTTGTTTCTTCCACGGT+TGG - chr8.4:23559531-23559550 MS.gene011573:intron 40.0%
!! TCATGTTTTGCTGTCTACTG+TGG - chr8.4:23559935-23559954 MS.gene011573:intron 40.0%
!! TGGTACTGATATAGCTGTCA+AGG + chr8.4:23561006-23561025 None:intergenic 40.0%
!!! CCGGTACTTTTTTCACAGAA+TGG - chr8.4:23562292-23562311 MS.gene011573:intron 40.0%
AACTAGCAGCTACTATCGTG+GGG - chr8.4:23561663-23561682 MS.gene011573:intron 45.0%
AACTTACAGCAAACCTCAGG+AGG + chr8.4:23560500-23560519 None:intergenic 45.0%
ACTCTCTCACTTGACAGTCA+AGG - chr8.4:23560879-23560898 MS.gene011573:intron 45.0%
AGATTGCTTAACTAGTGCCC+CGG - chr8.4:23560205-23560224 MS.gene011573:intron 45.0%
CAAAATGGGTGACTGTGACA+TGG + chr8.4:23560337-23560356 None:intergenic 45.0%
CAGAACTTACAGCAAACCTC+AGG + chr8.4:23560503-23560522 None:intergenic 45.0%
CTATATCAGTACCATCGGAG+TGG - chr8.4:23561012-23561031 MS.gene011573:intron 45.0%
CTGGAAGTGGGACATGTATA+TGG + chr8.4:23561980-23561999 None:intergenic 45.0%
GGAAGTGGGACATGTATATG+GGG + chr8.4:23561978-23561997 None:intergenic 45.0%
GTTGATTGGAGATTCTGGTG+TGG - chr8.4:23560461-23560480 MS.gene011573:intron 45.0%
TAACCTCATTTACTCGTCGC+CGG - chr8.4:23562273-23562292 MS.gene011573:intron 45.0%
TGGAAACAAGAGCGATCTCT+CGG - chr8.4:23561895-23561914 MS.gene011573:intron 45.0%
TGTACTGGGGAATCCTCTAA+TGG - chr8.4:23559717-23559736 MS.gene011573:intron 45.0%
! ATTGTATAGTGGGACACTGC+TGG - chr8.4:23561619-23561638 MS.gene011573:intron 45.0%
! CACAGTCACCCATTTTGCTA+TGG - chr8.4:23560340-23560359 MS.gene011573:intron 45.0%
! GAAAGCTTGTTCCACATTGG+AGG + chr8.4:23562119-23562138 None:intergenic 45.0%
! TCACTGGTTGTCCTCGAATT+TGG + chr8.4:23562355-23562374 None:intergenic 45.0%
! TCGGCTCAATTATCTGGGAT+TGG - chr8.4:23561548-23561567 MS.gene011573:intron 45.0%
! TCTTCCACGGTTGGTATAAG+GGG - chr8.4:23559540-23559559 MS.gene011573:intron 45.0%
!! GAACTCTAAGGTCTCTGTGA+TGG - chr8.4:23559297-23559316 MS.gene011573:intron 45.0%
!! TGTGTCCTCTGAAACAGCAA+AGG - chr8.4:23561928-23561947 MS.gene011573:intron 45.0%
AATTTGGACTGTTGCAGGCC+TGG + chr8.4:23562339-23562358 None:intergenic 50.0%
AGAATGTTAACCCATGCCCC+CGG - chr8.4:23560075-23560094 MS.gene011573:intron 50.0%
AGATCCCCTTATACCAACCG+TGG + chr8.4:23559547-23559566 None:intergenic 50.0%
AGGACAACCAGTGAACCAGA+AGG - chr8.4:23562361-23562380 MS.gene011573:intron 50.0%
ATTGCTTAACTAGTGCCCCG+GGG - chr8.4:23560207-23560226 MS.gene011573:intron 50.0%
CCTCGAATTTGGACTGTTGC+AGG + chr8.4:23562344-23562363 None:intergenic 50.0%
CCTGCAACAGTCCAAATTCG+AGG - chr8.4:23562341-23562360 MS.gene011573:intron 50.0%
CTGCTGGTCAAGAACGTTTC+CGG - chr8.4:23561635-23561654 MS.gene011573:intron 50.0%
GAAAATCCGCACTGTTGAGC+AGG - chr8.4:23561130-23561149 MS.gene011573:intron 50.0%
GATTGCTTAACTAGTGCCCC+GGG - chr8.4:23560206-23560225 MS.gene011573:intron 50.0%
GCTTACAAAGTCCACTCCGA+TGG + chr8.4:23561026-23561045 None:intergenic 50.0%
GGAAATTGCTGACAAAGGGC+CGG + chr8.4:23561718-23561737 None:intergenic 50.0%
GGAACAAGCTTTCATGGCCA+TGG - chr8.4:23562126-23562145 MS.gene011573:intron 50.0%
TCTTGTTAACCAATGCCCCC+GGG + chr8.4:23560226-23560245 None:intergenic 50.0%
TGGTTGCTTAACCAATGCCC+CGG + chr8.4:23560097-23560116 None:intergenic 50.0%
! GTCTTGTTAACCAATGCCCC+CGG + chr8.4:23560227-23560246 None:intergenic 50.0%
!! GCGCATTCGTTGTTTTGCGA+TGG - chr8.4:23559041-23559060 MS.gene011573:intron 50.0%
AATGTTAACCCATGCCCCCG+GGG - chr8.4:23560077-23560096 MS.gene011573:intron 55.0%
AGCTACTATCGTGGGGCTCA+TGG - chr8.4:23561670-23561689 MS.gene011573:intron 55.0%
ATCCGCACTGTTGAGCAGGA+TGG - chr8.4:23561134-23561153 MS.gene011573:intron 55.0%
CAACCAGTGAACCAGAAGGC+TGG - chr8.4:23562365-23562384 MS.gene011573:intron 55.0%
CTTGTTAACCAATGCCCCCG+GGG + chr8.4:23560225-23560244 None:intergenic 55.0%
GAATGTTAACCCATGCCCCC+GGG - chr8.4:23560076-23560095 MS.gene011573:intron 55.0%
GCAAGTCATGTCTCCTCCTG+AGG - chr8.4:23560484-23560503 MS.gene011573:intron 55.0%
GGTTGCTTAACCAATGCCCC+GGG + chr8.4:23560096-23560115 None:intergenic 55.0%
GTCTGGTGTCCTACACATGC+CGG + chr8.4:23559434-23559453 None:intergenic 55.0%
GTTGCTTAACCAATGCCCCG+GGG + chr8.4:23560095-23560114 None:intergenic 55.0%
TCCCATCCTGCTCAACAGTG+CGG + chr8.4:23561139-23561158 None:intergenic 55.0%
TCCGCACTGTTGAGCAGGAT+GGG - chr8.4:23561135-23561154 MS.gene011573:intron 55.0%
TTGCTTAACCAATGCCCCGG+GGG + chr8.4:23560094-23560113 None:intergenic 55.0%
TTGCTTAACTAGTGCCCCGG+GGG - chr8.4:23560208-23560227 MS.gene011573:intron 55.0%
! GTAATCACGTGTGCCGGTGT+CGG - chr8.4:23559405-23559424 MS.gene011573:CDS 55.0%
! GTACCGGCGACGAGTAAATG+AGG + chr8.4:23562279-23562298 None:intergenic 55.0%
!! CAACCAGCCTTCTGGTTCAC+TGG + chr8.4:23562371-23562390 None:intergenic 55.0%
ACGAGCAGCAACCAGCCTTC+TGG + chr8.4:23562379-23562398 None:intergenic 60.0%
GTCAACCTGCCAACAGTGCC+AGG - chr8.4:23562318-23562337 MS.gene011573:intron 60.0%
TGTCGGACACCGGCATGTGT+AGG - chr8.4:23559422-23559441 MS.gene011573:CDS 60.0%
TGTTGCAGGCCTGGCACTGT+TGG + chr8.4:23562330-23562349 None:intergenic 60.0%
CACATGCCGGTGTCCGACAC+CGG + chr8.4:23559421-23559440 None:intergenic 65.0%
TAACCAATGCCCCGGGGGCA+TGG + chr8.4:23560089-23560108 None:intergenic 65.0%
! AACCAATGCCCCGGGGGCAT+GGG + chr8.4:23560088-23560107 None:intergenic 65.0%
! AACTAGTGCCCCGGGGGCAT+TGG - chr8.4:23560214-23560233 MS.gene011573:intron 65.0%
AACCCATGCCCCCGGGGCAT+TGG - chr8.4:23560083-23560102 MS.gene011573:intron 70.0%
GCAGGCCTGGCACTGTTGGC+AGG + chr8.4:23562326-23562345 None:intergenic 70.0%
! CGTGTGCCGGTGTCGGACAC+CGG - chr8.4:23559412-23559431 MS.gene011573:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 23558897 23562403 23558897 ID=MS.gene011573
chr8.4 mRNA 23558897 23562403 23558897 ID=MS.gene011573.t1;Parent=MS.gene011573
chr8.4 exon 23562390 23562403 23562390 ID=MS.gene011573.t1.exon1;Parent=MS.gene011573.t1
chr8.4 CDS 23562390 23562403 23562390 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23560788 23560860 23560788 ID=MS.gene011573.t1.exon2;Parent=MS.gene011573.t1
chr8.4 CDS 23560788 23560860 23560788 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23560261 23560308 23560261 ID=MS.gene011573.t1.exon3;Parent=MS.gene011573.t1
chr8.4 CDS 23560261 23560308 23560261 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23560122 23560169 23560122 ID=MS.gene011573.t1.exon4;Parent=MS.gene011573.t1
chr8.4 CDS 23560122 23560169 23560122 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23559601 23559672 23559601 ID=MS.gene011573.t1.exon5;Parent=MS.gene011573.t1
chr8.4 CDS 23559601 23559672 23559601 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23559351 23559506 23559351 ID=MS.gene011573.t1.exon6;Parent=MS.gene011573.t1
chr8.4 CDS 23559351 23559506 23559351 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23559133 23559236 23559133 ID=MS.gene011573.t1.exon7;Parent=MS.gene011573.t1
chr8.4 CDS 23559133 23559236 23559133 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
chr8.4 exon 23558897 23558990 23558897 ID=MS.gene011573.t1.exon8;Parent=MS.gene011573.t1
chr8.4 CDS 23558897 23558990 23558897 ID=cds.MS.gene011573.t1;Parent=MS.gene011573.t1
Gene Sequence

>MS.gene011573

ATGAATCCTGAATAGTAAGTCTCAACTCTATTTTCTGTTTCCTTTTCTGCTTAACACTTCTCCAAATTTCCCGTCACAAATTAATTCTTTCCTGTCTTATTTTAAATTTTAATTATTCTTATTCGACCTTGTTTAGTTAGATCTGCGCATTCGTTGTTTTGCGATGGTGAATTTTAGTGCTTTCTGAACTGTTTTACTTTTTATCTTATGCATGGATTGTGAAATTTGCTCATGGATCGTGTTTCTTCAAACTTCCTTGCTGATTTAGATCCGTTTAATTAGTCGATGGATCCGTTTAGTTATCATGTTTAGTTATTTTTAGTCTATTTTCTACATGTTTGATTATGTGATCCACTTTTGGTTTCAAGAGATGTTCAATTTTCATAAGGTAAATGCATGTGAACTCTAAGGTCTCTGTGATGGATATGACATGTGAATTTCTTAAAATTGATACACATGGGATGGCAATGTTTTATACACCGATAATAATTTGAGAAAATGAGATAATGTAATCACGTGTGCCGGTGTCGGACACCGGCATGTGTAGGACACCAGACACACCTTCATTCATAAGTGTTGTTTTATGATTGAATTTAGGGAGTGACCGAATGCTTTTTCAACTCAGAGATTTCTATAGTTTGTTTCTTCCACGGTTGGTATAAGGGGATCTTGAAGTTGAAGTTTTATTCCATAGATAGATCAATGAATATGATGTCTTGAGTAAAATGTGGTCCTCCCTAAAGTTAATAGGTTTAAAAATTTATTAGAGGCATTTTTTAGCTGAACTATTTCTGAAATTGATATGTGTCTTTTGTAATCTTGTACTGGGGAATCCTCTAATGGACAAAAGTATTTCTCGTAAAGCTAGTGAAGTCCATGTGGGATATATGTTAAAAAATGTTGTACAGGTCATGGGACAGTTTAATAAAGAAGAATGTGTTGTTTGTGTGCATGACTTCAATCAATCTAGGATTAATTAATTAATTATAAATGATGTCCTATATATGTGGCATCGTACATGCTATACCTTTTAGACAGTCATGTTTTGCTGTCTACTGTGGCAAACATGAGCTTGAGTTTTGCTGATTAGCTCGAACATGCATAGCATGATTGAATTATGCTTTTTGTCTACATGAATCAATTTCTTGTCTTCATTGGTAGATCCTTATAAAATAAGGAGAATGTTAACCCATGCCCCCGGGGCATTGGTTAAGCAACCAAAATTGGCAAGCTTTTATAAAAAGGTAGTGTATTTATTACTTCATTAAAAGTTAAAAGTTACATTTCCAAGACAAAATTTCGATTTAAAGATTGCTTAACTAGTGCCCCGGGGGCATTGGTTAACAAGACCCATAAAATAATTATGATTCTTGATTATTTTATAATAGATCAATGCTTATCAAAAGTTACTCCATTATAGACTAGAACTCATTTGGGCCATGTCACAGTCACCCATTTTGCTATGGCCATTCTCTTTAGGAAAAAGATAGGCATTGATTAATAATATCATATCTTTGATTGGGGCATCCTATCTTATTTTCAGTGACTATTTGTTCAAGCTTTTGTTGATTGGAGATTCTGGTGTGGGCAAGTCATGTCTCCTCCTGAGGTTTGCTGTAAGTTCTGAGCCTCTGTTTTTTTTTTTTTTTTTTTTTCCTTCTTTAGTTATGGTCATCTTTTTTCAATTAATGAAAAATGAAATTGAATATTCCCATTTTTTACTATTACATTTTCATACAAAGTTGAATATAAAGAACATATGGATGTGTTTTTAGGCATTGAAAAAGTGTGTATGGTGTCATACATAGTGAGATTGTGAGCAGGCTATATGCACCAGAGAGTAAAAGGAGTAAATCTTGACCATAAACAATGTAAGGTCAAGGTTAAAAGCTTTTATTAGTCACTTCATTTTTTCAGAGTCACATCTCTATTTGTGGTTTGATCGAACGGCAAGATTTACTCCTTCTTCTCACATAAAAATGACTCTCTCACTTGACAGTCAAGGATGCAATGTCAAACAAAAGCTTTCACCTTGAATGATATTTTATGAAGTGGAGGTTACACTTCTTAATATTTTTCTTTTTCTGTGAAACAGGATGATTCATACCTTGACAGCTATATCAGTACCATCGGAGTGGACTTTGTAAGCATTCCATATCTACCATTTAAACTTATTTCCATGTTGTTTTCAACTTTAGTATGTGACTTGTTATTTACCATGCTTCCTTCTTTAGAAAATCCGCACTGTTGAGCAGGATGGGAAGACCATTAAACTTCAAATTGTAAGTCACTGACTAAGTTAATATTATTTGAATACTGAACAAGTTGTTATTGGTTCTGAACTCTGATGGGAGTTTTACACGAGTCTATCTATGCCAATTTGTTTTCTACATCTAAATTACGTTTTTGAGATTGTTTCAATTAGATGTACAAAAATCAATTTGAACATGCGTAGAAAAAATTATCCATGAGAAGTTTTATTTGAGGATATCTTTTTTTTTTTTGAGTAATTATTATATGTCCATTTGATAAATGGCTCATTCCAAGTTTTTCCAGTTACCAATTGTGTTCTTGGATCATTTGAACAGTATTATTTGAGGTTATAAAGTTACCCATTGAATATTAGGAAATCAATTTCCTTTTCAAACACTTCGGCTCAATTATCTGGGATTGGTTCTTTACTGTATTCTGTAATTGTTGACAGATTTTTCTGCATTTTTTTATTGTATAGTGGGACACTGCTGGTCAAGAACGTTTCCGGACTATAACTAGCAGCTACTATCGTGGGGCTCATGGCATAATTGTGAGTCTTTTTAAACCGGCCCTTTGTCAGCAATTTCCTTTTTACATTGTCTTGGGAAAACAATGGTGTAATCTTTTTAAATTTTTTTTTGCAGGTTGTTTACGATGTCACTGACCAAGAGAGCTTTAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGCTATGCAAGTGAAAATGTTAACAAGCTTCTAGTTGGAAACAAGAGCGATCTCTCGGACAAAAAAGTTGTGTCCTCTGAAACAGCAAAGGTGATTCTAAATTTGTTGATTTATGCCCCATATACATGTCCCACTTCCAGTGACATTTTTTTTAAGTCCTTCCTTTAATCTAATATTTTGATGTTTGTGCCTTTTGTACATCAGGCATTTGCAGATGAAATTGGAATTCCTTTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAAGCTTTCATGGCCATGGCTGCTGAAATTAAAAACAGGTATGGAATTTCTGTGTGTAAAGGACAACTATTGAGCTTTTTGCATGAGTTTGTGAACTTCAAAGAACCTTGTTTAGTCAATAGATACTGATCTACCGTGGTTATTAACCTCATTTACTCGTCGCCGGTACTTTTTTCACAGAATGGCGAGTCAACCTGCCAACAGTGCCAGGCCTGCAACAGTCCAAATTCGAGGACAACCAGTGAACCAGAAGGCTGGTTGCTGCTCGTCTTAG

Protein sequence

>MS.gene011573.t1

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPATVQIRGQPVNQKAGCCSS