Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93155.t1 | XP_013466434.1 | 100 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 1.40E-117 | 432.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93155.t1 | O23657 | 83.7 | 209 | 33 | 1 | 7 | 214 | 3 | 211 | 4.1e-97 | 355.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93155.t1 | A0A072VQS8 | 100.0 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 1.0e-117 | 432.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04918 | MS.gene93155 | 0.819583 | 1.08E-52 | -1.69E-46 |
MS.gene04919 | MS.gene93155 | 0.810081 | 1.38E-50 | -1.69E-46 |
MS.gene04920 | MS.gene93155 | 0.823117 | 1.65E-53 | -1.69E-46 |
MS.gene049283 | MS.gene93155 | 0.836972 | 6.84E-57 | -1.69E-46 |
MS.gene049499 | MS.gene93155 | 0.809155 | 2.18E-50 | -1.69E-46 |
MS.gene049580 | MS.gene93155 | 0.8118 | 5.84E-51 | -1.69E-46 |
MS.gene049680 | MS.gene93155 | 0.850102 | 2.11E-60 | -1.69E-46 |
MS.gene05029 | MS.gene93155 | 0.821954 | 3.07E-53 | -1.69E-46 |
MS.gene050752 | MS.gene93155 | 0.8267 | 2.35E-54 | -1.69E-46 |
MS.gene050828 | MS.gene93155 | 0.801712 | 7.91E-49 | -1.69E-46 |
MS.gene050838 | MS.gene93155 | 0.813265 | 2.79E-51 | -1.69E-46 |
MS.gene050945 | MS.gene93155 | 0.825593 | 4.31E-54 | -1.69E-46 |
MS.gene050955 | MS.gene93155 | 0.828735 | 7.62E-55 | -1.69E-46 |
MS.gene051003 | MS.gene93155 | 0.854362 | 1.29E-61 | -1.69E-46 |
MS.gene051234 | MS.gene93155 | 0.829942 | 3.88E-55 | -1.69E-46 |
MS.gene051343 | MS.gene93155 | 0.839733 | 1.33E-57 | -1.69E-46 |
MS.gene051597 | MS.gene93155 | 0.817558 | 3.10E-52 | -1.69E-46 |
MS.gene051676 | MS.gene93155 | 0.823675 | 1.22E-53 | -1.69E-46 |
MS.gene051699 | MS.gene93155 | 0.821083 | 4.88E-53 | -1.69E-46 |
MS.gene051832 | MS.gene93155 | 0.807182 | 5.73E-50 | -1.69E-46 |
MS.gene05188 | MS.gene93155 | 0.834961 | 2.21E-56 | -1.69E-46 |
MS.gene051902 | MS.gene93155 | 0.824798 | 6.64E-54 | -1.69E-46 |
MS.gene051903 | MS.gene93155 | 0.817476 | 3.23E-52 | -1.69E-46 |
MS.gene051975 | MS.gene93155 | 0.877693 | 5.12E-69 | -1.69E-46 |
MS.gene052072 | MS.gene93155 | 0.835495 | 1.62E-56 | -1.69E-46 |
MS.gene052434 | MS.gene93155 | 0.819965 | 8.80E-53 | -1.69E-46 |
MS.gene052533 | MS.gene93155 | 0.822112 | 2.82E-53 | -1.69E-46 |
MS.gene052685 | MS.gene93155 | 0.812302 | 4.54E-51 | -1.69E-46 |
MS.gene052818 | MS.gene93155 | -0.804147 | 2.48E-49 | -1.69E-46 |
MS.gene052889 | MS.gene93155 | 0.82671 | 2.34E-54 | -1.69E-46 |
MS.gene052947 | MS.gene93155 | 0.822379 | 2.44E-53 | -1.69E-46 |
MS.gene053006 | MS.gene93155 | 0.810374 | 1.19E-50 | -1.69E-46 |
MS.gene053058 | MS.gene93155 | 0.827573 | 1.45E-54 | -1.69E-46 |
MS.gene053298 | MS.gene93155 | 0.856576 | 2.93E-62 | -1.69E-46 |
MS.gene053340 | MS.gene93155 | 0.800387 | 1.48E-48 | -1.69E-46 |
MS.gene053401 | MS.gene93155 | 0.803256 | 3.80E-49 | -1.69E-46 |
MS.gene053564 | MS.gene93155 | 0.819091 | 1.39E-52 | -1.69E-46 |
MS.gene053786 | MS.gene93155 | 0.815285 | 1.00E-51 | -1.69E-46 |
MS.gene053963 | MS.gene93155 | 0.844959 | 5.47E-59 | -1.69E-46 |
MS.gene054222 | MS.gene93155 | 0.836082 | 1.15E-56 | -1.69E-46 |
MS.gene054403 | MS.gene93155 | 0.831539 | 1.58E-55 | -1.69E-46 |
MS.gene05469 | MS.gene93155 | 0.842009 | 3.36E-58 | -1.69E-46 |
MS.gene054957 | MS.gene93155 | 0.820539 | 6.50E-53 | -1.69E-46 |
MS.gene05517 | MS.gene93155 | 0.812044 | 5.17E-51 | -1.69E-46 |
MS.gene055513 | MS.gene93155 | 0.815425 | 9.30E-52 | -1.69E-46 |
MS.gene055555 | MS.gene93155 | 0.829332 | 5.46E-55 | -1.69E-46 |
MS.gene055603 | MS.gene93155 | 0.832417 | 9.56E-56 | -1.69E-46 |
MS.gene056091 | MS.gene93155 | 0.821795 | 3.34E-53 | -1.69E-46 |
MS.gene05636 | MS.gene93155 | 0.814417 | 1.56E-51 | -1.69E-46 |
MS.gene056403 | MS.gene93155 | 0.834913 | 2.28E-56 | -1.69E-46 |
MS.gene056605 | MS.gene93155 | 0.828366 | 9.35E-55 | -1.69E-46 |
MS.gene056631 | MS.gene93155 | 0.803017 | 4.26E-49 | -1.69E-46 |
MS.gene056638 | MS.gene93155 | 0.828377 | 9.30E-55 | -1.69E-46 |
MS.gene056699 | MS.gene93155 | 0.815794 | 7.70E-52 | -1.69E-46 |
MS.gene056786 | MS.gene93155 | 0.804517 | 2.08E-49 | -1.69E-46 |
MS.gene05689 | MS.gene93155 | 0.825461 | 4.63E-54 | -1.69E-46 |
MS.gene056986 | MS.gene93155 | 0.903043 | 5.21E-79 | -1.69E-46 |
MS.gene057094 | MS.gene93155 | 0.804783 | 1.83E-49 | -1.69E-46 |
MS.gene057102 | MS.gene93155 | 0.879526 | 1.16E-69 | -1.69E-46 |
MS.gene057622 | MS.gene93155 | 0.811931 | 5.47E-51 | -1.69E-46 |
MS.gene057705 | MS.gene93155 | 0.807647 | 4.56E-50 | -1.69E-46 |
MS.gene057890 | MS.gene93155 | -0.838692 | 2.47E-57 | -1.69E-46 |
MS.gene057893 | MS.gene93155 | -0.821879 | 3.19E-53 | -1.69E-46 |
MS.gene057999 | MS.gene93155 | 0.877276 | 7.15E-69 | -1.69E-46 |
MS.gene058074 | MS.gene93155 | 0.828165 | 1.05E-54 | -1.69E-46 |
MS.gene058159 | MS.gene93155 | 0.823268 | 1.52E-53 | -1.69E-46 |
MS.gene058592 | MS.gene93155 | 0.805903 | 1.07E-49 | -1.69E-46 |
MS.gene059146 | MS.gene93155 | 0.886323 | 3.78E-72 | -1.69E-46 |
MS.gene059170 | MS.gene93155 | 0.807374 | 5.21E-50 | -1.69E-46 |
MS.gene059227 | MS.gene93155 | 0.816454 | 5.48E-52 | -1.69E-46 |
MS.gene059360 | MS.gene93155 | 0.803501 | 3.38E-49 | -1.69E-46 |
MS.gene05952 | MS.gene93155 | 0.822492 | 2.30E-53 | -1.69E-46 |
MS.gene059830 | MS.gene93155 | 0.805906 | 1.06E-49 | -1.69E-46 |
MS.gene05985 | MS.gene93155 | -0.858353 | 8.73E-63 | -1.69E-46 |
MS.gene059901 | MS.gene93155 | -0.86498 | 8.22E-65 | -1.69E-46 |
MS.gene059935 | MS.gene93155 | 0.825786 | 3.88E-54 | -1.69E-46 |
MS.gene06011 | MS.gene93155 | 0.873251 | 1.70E-67 | -1.69E-46 |
MS.gene060365 | MS.gene93155 | 0.826046 | 3.36E-54 | -1.69E-46 |
MS.gene060586 | MS.gene93155 | 0.814098 | 1.83E-51 | -1.69E-46 |
MS.gene060763 | MS.gene93155 | 0.861056 | 1.34E-63 | -1.69E-46 |
MS.gene060830 | MS.gene93155 | 0.846744 | 1.79E-59 | -1.69E-46 |
MS.gene060935 | MS.gene93155 | 0.823545 | 1.31E-53 | -1.69E-46 |
MS.gene060937 | MS.gene93155 | 0.834194 | 3.45E-56 | -1.69E-46 |
MS.gene061100 | MS.gene93155 | 0.801152 | 1.03E-48 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93155.t1 | MTR_1g029450 | 100.000 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 5.80e-161 | 443 |
MS.gene93155.t1 | MTR_8g093740 | 85.990 | 207 | 28 | 1 | 7 | 213 | 3 | 208 | 3.82e-133 | 372 |
MS.gene93155.t1 | MTR_3g096350 | 83.495 | 206 | 33 | 1 | 8 | 213 | 3 | 207 | 1.02e-127 | 358 |
MS.gene93155.t1 | MTR_8g093740 | 85.799 | 169 | 23 | 1 | 45 | 213 | 8 | 175 | 4.45e-106 | 303 |
MS.gene93155.t1 | MTR_7g103070 | 67.822 | 202 | 64 | 1 | 14 | 214 | 13 | 214 | 4.68e-104 | 299 |
MS.gene93155.t1 | MTR_1g062760 | 66.500 | 200 | 67 | 0 | 14 | 213 | 11 | 210 | 3.89e-102 | 294 |
MS.gene93155.t1 | MTR_1g090717 | 61.682 | 214 | 78 | 2 | 3 | 214 | 1 | 212 | 9.49e-92 | 268 |
MS.gene93155.t1 | MTR_7g103070 | 68.153 | 157 | 50 | 0 | 58 | 214 | 2 | 158 | 1.23e-82 | 243 |
MS.gene93155.t1 | MTR_3g096350 | 82.353 | 136 | 22 | 1 | 8 | 141 | 3 | 138 | 1.01e-78 | 233 |
MS.gene93155.t1 | MTR_3g096350 | 85.938 | 128 | 18 | 0 | 8 | 135 | 3 | 130 | 1.52e-78 | 232 |
MS.gene93155.t1 | MTR_7g081700 | 50.739 | 203 | 94 | 5 | 13 | 214 | 4 | 201 | 7.76e-59 | 184 |
MS.gene93155.t1 | MTR_8g006970 | 56.000 | 175 | 74 | 3 | 13 | 186 | 4 | 176 | 6.82e-58 | 181 |
MS.gene93155.t1 | MTR_2g005500 | 49.261 | 203 | 96 | 5 | 13 | 213 | 5 | 202 | 3.24e-57 | 180 |
MS.gene93155.t1 | MTR_8g006970 | 50.249 | 201 | 95 | 4 | 15 | 214 | 20 | 216 | 1.80e-56 | 178 |
MS.gene93155.t1 | MTR_1g068740 | 44.749 | 219 | 108 | 7 | 3 | 213 | 1 | 214 | 1.38e-54 | 174 |
MS.gene93155.t1 | MTR_1g068730 | 44.292 | 219 | 109 | 7 | 3 | 213 | 1 | 214 | 4.51e-54 | 172 |
MS.gene93155.t1 | MTR_1g115325 | 45.933 | 209 | 100 | 7 | 13 | 213 | 11 | 214 | 4.06e-53 | 170 |
MS.gene93155.t1 | MTR_7g100020 | 49.438 | 178 | 82 | 5 | 13 | 184 | 11 | 186 | 8.55e-52 | 166 |
MS.gene93155.t1 | MTR_8g031660 | 42.647 | 204 | 110 | 4 | 16 | 214 | 5 | 206 | 1.18e-51 | 166 |
MS.gene93155.t1 | MTR_2g096550 | 43.350 | 203 | 112 | 3 | 13 | 213 | 11 | 212 | 3.04e-51 | 165 |
MS.gene93155.t1 | MTR_6g021790 | 43.128 | 211 | 108 | 5 | 14 | 214 | 3 | 211 | 4.82e-51 | 164 |
MS.gene93155.t1 | MTR_2g027660 | 42.925 | 212 | 107 | 6 | 14 | 214 | 3 | 211 | 6.71e-49 | 159 |
MS.gene93155.t1 | MTR_6g079550 | 49.708 | 171 | 83 | 3 | 15 | 184 | 10 | 178 | 2.35e-48 | 158 |
MS.gene93155.t1 | MTR_2g090865 | 45.455 | 209 | 105 | 6 | 13 | 214 | 7 | 213 | 6.60e-48 | 156 |
MS.gene93155.t1 | MTR_4g063160 | 44.019 | 209 | 105 | 8 | 13 | 213 | 11 | 215 | 1.71e-47 | 155 |
MS.gene93155.t1 | MTR_2g014990 | 40.553 | 217 | 105 | 6 | 13 | 214 | 9 | 216 | 4.97e-47 | 154 |
MS.gene93155.t1 | MTR_8g031870 | 47.468 | 158 | 80 | 3 | 16 | 172 | 5 | 160 | 9.02e-47 | 153 |
MS.gene93155.t1 | MTR_4g088090 | 40.092 | 217 | 106 | 6 | 13 | 214 | 9 | 216 | 1.22e-46 | 153 |
MS.gene93155.t1 | MTR_2g083860 | 48.214 | 168 | 84 | 3 | 13 | 179 | 9 | 174 | 3.83e-46 | 152 |
MS.gene93155.t1 | MTR_8g027220 | 46.429 | 168 | 87 | 3 | 13 | 179 | 22 | 187 | 7.08e-46 | 152 |
MS.gene93155.t1 | MTR_2g005510 | 39.810 | 211 | 116 | 5 | 13 | 214 | 11 | 219 | 1.25e-45 | 151 |
MS.gene93155.t1 | MTR_3g069510 | 39.524 | 210 | 117 | 5 | 13 | 214 | 8 | 215 | 1.51e-45 | 150 |
MS.gene93155.t1 | MTR_4g079350 | 42.932 | 191 | 95 | 4 | 13 | 191 | 9 | 197 | 1.95e-45 | 150 |
MS.gene93155.t1 | MTR_2g075950 | 45.833 | 168 | 88 | 3 | 13 | 179 | 9 | 174 | 5.22e-45 | 149 |
MS.gene93155.t1 | MTR_7g051940 | 42.661 | 218 | 92 | 7 | 16 | 214 | 12 | 215 | 5.43e-45 | 149 |
MS.gene93155.t1 | MTR_8g031680 | 40.385 | 208 | 113 | 5 | 16 | 214 | 5 | 210 | 7.03e-45 | 149 |
MS.gene93155.t1 | MTR_8g089985 | 38.679 | 212 | 116 | 5 | 14 | 213 | 14 | 223 | 7.06e-45 | 149 |
MS.gene93155.t1 | MTR_4g064897 | 38.278 | 209 | 120 | 5 | 13 | 214 | 8 | 214 | 8.56e-45 | 149 |
MS.gene93155.t1 | MTR_3g086980 | 37.264 | 212 | 120 | 5 | 13 | 213 | 12 | 221 | 2.23e-44 | 148 |
MS.gene93155.t1 | MTR_8g036220 | 41.667 | 216 | 108 | 6 | 15 | 214 | 14 | 227 | 4.91e-44 | 147 |
MS.gene93155.t1 | MTR_1g068730 | 46.250 | 160 | 82 | 4 | 3 | 160 | 1 | 158 | 1.37e-43 | 144 |
MS.gene93155.t1 | MTR_1g078200 | 41.026 | 195 | 103 | 4 | 15 | 208 | 12 | 195 | 1.98e-43 | 145 |
MS.gene93155.t1 | MTR_1g068740 | 45.963 | 161 | 81 | 5 | 3 | 160 | 1 | 158 | 2.18e-43 | 144 |
MS.gene93155.t1 | MTR_8g031830 | 40.000 | 200 | 113 | 5 | 16 | 214 | 5 | 198 | 9.47e-43 | 143 |
MS.gene93155.t1 | MTR_0262s0050 | 42.262 | 168 | 94 | 3 | 13 | 179 | 11 | 176 | 6.46e-42 | 141 |
MS.gene93155.t1 | MTR_8g107070 | 47.059 | 170 | 87 | 3 | 13 | 181 | 10 | 177 | 1.08e-41 | 142 |
MS.gene93155.t1 | MTR_1g052475 | 37.209 | 215 | 118 | 7 | 13 | 213 | 11 | 222 | 9.54e-41 | 138 |
MS.gene93155.t1 | MTR_4g099470 | 52.273 | 132 | 61 | 2 | 48 | 179 | 16 | 145 | 1.02e-40 | 137 |
MS.gene93155.t1 | MTR_7g405790 | 42.353 | 170 | 95 | 3 | 16 | 184 | 14 | 181 | 1.69e-38 | 132 |
MS.gene93155.t1 | MTR_5g076590 | 37.563 | 197 | 114 | 6 | 19 | 214 | 12 | 200 | 1.15e-36 | 127 |
MS.gene93155.t1 | MTR_7g117910 | 43.836 | 146 | 79 | 3 | 13 | 157 | 16 | 159 | 2.87e-36 | 127 |
MS.gene93155.t1 | MTR_3g064390 | 36.041 | 197 | 117 | 6 | 19 | 214 | 12 | 200 | 1.97e-35 | 124 |
MS.gene93155.t1 | MTR_1g094220 | 40.237 | 169 | 96 | 5 | 19 | 185 | 33 | 198 | 3.66e-35 | 123 |
MS.gene93155.t1 | MTR_1g094220 | 40.000 | 160 | 92 | 4 | 19 | 176 | 33 | 190 | 2.57e-34 | 121 |
MS.gene93155.t1 | MTR_2g102060 | 39.873 | 158 | 92 | 3 | 19 | 175 | 12 | 167 | 2.84e-34 | 121 |
MS.gene93155.t1 | MTR_8g103550 | 38.272 | 162 | 97 | 3 | 19 | 179 | 11 | 170 | 8.22e-34 | 120 |
MS.gene93155.t1 | MTR_1g094220 | 39.752 | 161 | 93 | 4 | 19 | 177 | 33 | 191 | 2.42e-33 | 119 |
MS.gene93155.t1 | MTR_4g098950 | 38.994 | 159 | 94 | 3 | 18 | 175 | 10 | 166 | 6.79e-33 | 118 |
MS.gene93155.t1 | MTR_1g094220 | 37.640 | 178 | 105 | 5 | 19 | 192 | 33 | 208 | 1.44e-32 | 118 |
MS.gene93155.t1 | MTR_8g090215 | 37.736 | 159 | 96 | 3 | 18 | 175 | 10 | 166 | 3.83e-32 | 116 |
MS.gene93155.t1 | MTR_5g013900 | 38.365 | 159 | 95 | 3 | 18 | 175 | 10 | 166 | 5.01e-32 | 115 |
MS.gene93155.t1 | MTR_3g087160 | 37.278 | 169 | 103 | 3 | 18 | 185 | 10 | 176 | 5.10e-32 | 115 |
MS.gene93155.t1 | MTR_4g069850 | 36.842 | 171 | 100 | 5 | 17 | 180 | 8 | 177 | 7.18e-29 | 107 |
MS.gene93155.t1 | MTR_8g092020 | 39.444 | 180 | 94 | 7 | 1 | 172 | 1 | 173 | 9.07e-29 | 107 |
MS.gene93155.t1 | MTR_2g101890 | 34.653 | 202 | 106 | 6 | 17 | 211 | 10 | 192 | 8.50e-28 | 105 |
MS.gene93155.t1 | MTR_4g012940 | 33.663 | 202 | 108 | 6 | 17 | 211 | 8 | 190 | 4.89e-27 | 102 |
MS.gene93155.t1 | MTR_2g005500 | 34.975 | 203 | 85 | 5 | 13 | 213 | 5 | 162 | 1.68e-26 | 100 |
MS.gene93155.t1 | MTR_1g097420 | 37.423 | 163 | 94 | 5 | 17 | 172 | 8 | 169 | 1.95e-26 | 101 |
MS.gene93155.t1 | MTR_3g064390 | 40.000 | 130 | 75 | 3 | 19 | 147 | 12 | 139 | 1.32e-25 | 97.8 |
MS.gene93155.t1 | MTR_3g107717 | 36.813 | 182 | 106 | 7 | 7 | 185 | 2 | 177 | 2.15e-25 | 99.0 |
MS.gene93155.t1 | MTR_3g107707 | 36.813 | 182 | 106 | 7 | 7 | 185 | 2 | 177 | 2.31e-25 | 99.0 |
MS.gene93155.t1 | MTR_3g107713 | 36.813 | 182 | 106 | 7 | 7 | 185 | 2 | 177 | 2.83e-25 | 98.6 |
MS.gene93155.t1 | MTR_2g090875 | 31.250 | 176 | 106 | 5 | 17 | 180 | 6 | 178 | 2.37e-23 | 93.2 |
MS.gene93155.t1 | MTR_3g078260 | 29.064 | 203 | 126 | 6 | 8 | 198 | 2 | 198 | 6.87e-23 | 92.0 |
MS.gene93155.t1 | MTR_6g087980 | 30.726 | 179 | 109 | 5 | 17 | 183 | 6 | 181 | 7.15e-23 | 92.0 |
MS.gene93155.t1 | MTR_4g073250 | 29.609 | 179 | 111 | 5 | 17 | 183 | 6 | 181 | 3.59e-22 | 90.1 |
MS.gene93155.t1 | MTR_8g075240 | 31.250 | 176 | 106 | 5 | 17 | 180 | 6 | 178 | 4.09e-21 | 87.0 |
MS.gene93155.t1 | MTR_1g097420 | 34.545 | 165 | 98 | 6 | 15 | 172 | 35 | 196 | 4.78e-21 | 87.8 |
MS.gene93155.t1 | MTR_4g088055 | 29.651 | 172 | 106 | 5 | 17 | 176 | 6 | 174 | 6.63e-21 | 86.7 |
MS.gene93155.t1 | MTR_5g022600 | 30.682 | 176 | 107 | 5 | 17 | 180 | 6 | 178 | 9.69e-21 | 86.3 |
MS.gene93155.t1 | MTR_6g039490 | 36.196 | 163 | 96 | 6 | 17 | 172 | 8 | 169 | 1.54e-20 | 86.3 |
MS.gene93155.t1 | MTR_4g113620 | 34.568 | 162 | 93 | 5 | 18 | 179 | 14 | 162 | 3.28e-19 | 82.4 |
MS.gene93155.t1 | MTR_8g031810 | 42.553 | 94 | 39 | 2 | 16 | 108 | 5 | 84 | 7.47e-18 | 75.9 |
MS.gene93155.t1 | MTR_3g078260 | 32.824 | 131 | 81 | 4 | 8 | 137 | 2 | 126 | 7.38e-16 | 72.0 |
MS.gene93155.t1 | MTR_1452s0010 | 45.588 | 68 | 36 | 1 | 47 | 114 | 12 | 78 | 5.83e-13 | 63.2 |
MS.gene93155.t1 | MTR_5g078090 | 31.034 | 174 | 97 | 9 | 14 | 176 | 16 | 177 | 2.22e-12 | 63.5 |
MS.gene93155.t1 | MTR_1686s0010 | 36.250 | 80 | 49 | 2 | 37 | 115 | 1 | 79 | 1.37e-11 | 59.3 |
MS.gene93155.t1 | MTR_8g091980 | 30.675 | 163 | 83 | 6 | 19 | 153 | 23 | 183 | 4.87e-11 | 61.2 |
MS.gene93155.t1 | MTR_8g091980 | 30.675 | 163 | 83 | 6 | 19 | 153 | 23 | 183 | 4.91e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93155.t1 | AT1G43890 | 85.354 | 198 | 29 | 0 | 7 | 204 | 3 | 200 | 3.47e-126 | 355 |
MS.gene93155.t1 | AT1G43890 | 85.354 | 198 | 29 | 0 | 7 | 204 | 3 | 200 | 3.47e-126 | 355 |
MS.gene93155.t1 | AT1G43890 | 85.354 | 198 | 29 | 0 | 7 | 204 | 3 | 200 | 3.47e-126 | 355 |
MS.gene93155.t1 | AT5G03530 | 67.308 | 208 | 68 | 0 | 7 | 214 | 3 | 210 | 8.73e-110 | 313 |
MS.gene93155.t1 | AT5G03530 | 67.308 | 208 | 68 | 0 | 7 | 214 | 3 | 210 | 8.73e-110 | 313 |
MS.gene93155.t1 | AT3G09910 | 63.942 | 208 | 69 | 2 | 7 | 214 | 3 | 204 | 1.06e-89 | 263 |
MS.gene93155.t1 | AT3G09910 | 63.942 | 208 | 69 | 2 | 7 | 214 | 3 | 204 | 1.06e-89 | 263 |
MS.gene93155.t1 | AT3G09910 | 63.942 | 208 | 69 | 2 | 7 | 214 | 3 | 204 | 1.06e-89 | 263 |
MS.gene93155.t1 | AT3G09910 | 66.111 | 180 | 58 | 1 | 7 | 183 | 3 | 182 | 5.00e-81 | 240 |
MS.gene93155.t1 | AT3G09910 | 66.111 | 180 | 58 | 1 | 7 | 183 | 3 | 182 | 5.00e-81 | 240 |
MS.gene93155.t1 | AT1G02130 | 49.261 | 203 | 98 | 4 | 13 | 214 | 4 | 202 | 2.17e-57 | 180 |
MS.gene93155.t1 | AT5G47200 | 48.768 | 203 | 98 | 5 | 13 | 214 | 4 | 201 | 1.03e-56 | 179 |
MS.gene93155.t1 | AT4G17530 | 48.768 | 203 | 98 | 5 | 13 | 214 | 4 | 201 | 1.60e-56 | 178 |
MS.gene93155.t1 | AT4G35860 | 48.925 | 186 | 88 | 4 | 14 | 194 | 3 | 186 | 5.27e-54 | 172 |
MS.gene93155.t1 | AT3G53610 | 46.860 | 207 | 100 | 7 | 13 | 213 | 11 | 213 | 1.41e-53 | 171 |
MS.gene93155.t1 | AT3G53610 | 46.860 | 207 | 100 | 7 | 13 | 213 | 11 | 213 | 1.41e-53 | 171 |
MS.gene93155.t1 | AT3G53610 | 46.860 | 207 | 100 | 7 | 13 | 213 | 11 | 213 | 1.41e-53 | 171 |
MS.gene93155.t1 | AT5G59840 | 46.377 | 207 | 101 | 7 | 13 | 213 | 11 | 213 | 2.83e-53 | 170 |
MS.gene93155.t1 | AT5G03520 | 45.000 | 220 | 109 | 6 | 3 | 215 | 1 | 215 | 6.61e-53 | 169 |
MS.gene93155.t1 | AT3G09900 | 47.642 | 212 | 99 | 7 | 12 | 215 | 10 | 217 | 6.87e-53 | 169 |
MS.gene93155.t1 | AT3G11730 | 45.545 | 202 | 107 | 3 | 13 | 213 | 4 | 203 | 2.61e-52 | 167 |
MS.gene93155.t1 | AT3G46060 | 45.894 | 207 | 102 | 7 | 13 | 213 | 11 | 213 | 5.49e-52 | 167 |
MS.gene93155.t1 | AT3G46060 | 45.894 | 207 | 102 | 7 | 13 | 213 | 11 | 213 | 5.49e-52 | 167 |
MS.gene93155.t1 | AT3G46060 | 45.894 | 207 | 102 | 7 | 13 | 213 | 11 | 213 | 5.49e-52 | 167 |
MS.gene93155.t1 | AT4G17160 | 42.647 | 204 | 111 | 4 | 14 | 213 | 3 | 204 | 1.64e-50 | 163 |
MS.gene93155.t1 | AT4G39990 | 41.905 | 210 | 110 | 5 | 15 | 214 | 15 | 222 | 3.35e-50 | 163 |
MS.gene93155.t1 | AT4G17170 | 49.375 | 160 | 78 | 3 | 14 | 172 | 3 | 160 | 2.40e-49 | 160 |
MS.gene93155.t1 | AT2G33870 | 47.024 | 168 | 86 | 3 | 13 | 179 | 9 | 174 | 1.25e-47 | 156 |
MS.gene93155.t1 | AT4G18430 | 41.905 | 210 | 112 | 4 | 13 | 214 | 9 | 216 | 1.46e-46 | 153 |
MS.gene93155.t1 | AT1G09630 | 40.476 | 210 | 115 | 4 | 13 | 214 | 8 | 215 | 1.60e-46 | 153 |
MS.gene93155.t1 | AT5G60860 | 41.014 | 217 | 104 | 6 | 13 | 214 | 9 | 216 | 2.27e-46 | 153 |
MS.gene93155.t1 | AT1G18200 | 48.214 | 168 | 84 | 3 | 13 | 179 | 9 | 174 | 4.06e-46 | 152 |
MS.gene93155.t1 | AT3G07410 | 42.105 | 209 | 110 | 4 | 15 | 214 | 10 | 216 | 4.25e-46 | 152 |
MS.gene93155.t1 | AT1G73640 | 48.214 | 168 | 84 | 3 | 13 | 179 | 9 | 174 | 4.59e-46 | 152 |
MS.gene93155.t1 | AT1G28550 | 47.024 | 168 | 86 | 3 | 13 | 179 | 9 | 174 | 5.26e-46 | 152 |
MS.gene93155.t1 | AT1G16920 | 47.619 | 168 | 85 | 3 | 13 | 179 | 9 | 174 | 6.51e-46 | 151 |
MS.gene93155.t1 | AT5G45750 | 47.024 | 168 | 86 | 3 | 13 | 179 | 9 | 174 | 8.17e-46 | 151 |
MS.gene93155.t1 | AT1G06400 | 47.619 | 168 | 85 | 3 | 13 | 179 | 9 | 174 | 1.84e-45 | 150 |
MS.gene93155.t1 | AT4G18800 | 42.029 | 207 | 113 | 4 | 13 | 214 | 9 | 213 | 4.22e-45 | 149 |
MS.gene93155.t1 | AT2G43130 | 41.262 | 206 | 113 | 5 | 15 | 214 | 10 | 213 | 5.59e-45 | 149 |
MS.gene93155.t1 | AT3G15060 | 45.087 | 173 | 92 | 3 | 13 | 184 | 9 | 179 | 8.80e-45 | 149 |
MS.gene93155.t1 | AT1G05810 | 45.029 | 171 | 91 | 3 | 15 | 184 | 10 | 178 | 1.57e-44 | 148 |
MS.gene93155.t1 | AT5G47520 | 44.444 | 171 | 92 | 3 | 15 | 184 | 12 | 180 | 3.49e-44 | 147 |
MS.gene93155.t1 | AT1G05810 | 45.029 | 171 | 91 | 3 | 15 | 184 | 56 | 224 | 5.03e-44 | 148 |
MS.gene93155.t1 | AT1G07410 | 38.942 | 208 | 119 | 5 | 13 | 214 | 8 | 213 | 5.31e-44 | 147 |
MS.gene93155.t1 | AT5G65270 | 41.176 | 170 | 97 | 3 | 13 | 181 | 13 | 180 | 6.40e-44 | 147 |
MS.gene93155.t1 | AT3G46830 | 42.857 | 168 | 93 | 3 | 13 | 179 | 8 | 173 | 7.33e-43 | 144 |
MS.gene93155.t1 | AT3G46830 | 42.857 | 168 | 93 | 3 | 13 | 179 | 8 | 173 | 7.33e-43 | 144 |
MS.gene93155.t1 | AT3G12160 | 38.095 | 210 | 119 | 5 | 13 | 213 | 11 | 218 | 7.90e-43 | 144 |
MS.gene93155.t1 | AT2G31680 | 45.783 | 166 | 87 | 3 | 15 | 179 | 10 | 173 | 8.45e-43 | 144 |
MS.gene93155.t1 | AT1G01200 | 44.706 | 170 | 90 | 4 | 13 | 180 | 24 | 191 | 1.42e-42 | 144 |
MS.gene93155.t1 | AT5G47960 | 36.792 | 212 | 121 | 6 | 13 | 213 | 11 | 220 | 3.68e-42 | 142 |
MS.gene93155.t1 | AT5G59150 | 41.040 | 173 | 99 | 3 | 13 | 184 | 8 | 178 | 6.49e-42 | 141 |
MS.gene93155.t1 | AT5G03520 | 42.938 | 177 | 90 | 5 | 45 | 215 | 34 | 205 | 4.65e-38 | 131 |
MS.gene93155.t1 | AT4G39890 | 38.251 | 183 | 109 | 3 | 18 | 197 | 10 | 191 | 1.31e-37 | 130 |
MS.gene93155.t1 | AT4G35860 | 50.407 | 123 | 59 | 2 | 58 | 180 | 2 | 122 | 1.64e-36 | 126 |
MS.gene93155.t1 | AT3G54840 | 39.429 | 175 | 99 | 5 | 6 | 175 | 19 | 191 | 2.64e-34 | 121 |
MS.gene93155.t1 | AT4G19640 | 38.889 | 162 | 96 | 3 | 19 | 179 | 12 | 171 | 5.19e-34 | 120 |
MS.gene93155.t1 | AT5G45130 | 35.533 | 197 | 118 | 6 | 19 | 214 | 12 | 200 | 6.04e-34 | 120 |
MS.gene93155.t1 | AT3G54840 | 40.506 | 158 | 90 | 4 | 20 | 175 | 2 | 157 | 8.58e-34 | 119 |
MS.gene93155.t1 | AT5G10260 | 39.623 | 159 | 93 | 3 | 18 | 175 | 10 | 166 | 1.99e-33 | 119 |
MS.gene93155.t1 | AT3G54840 | 40.764 | 157 | 89 | 4 | 19 | 173 | 35 | 189 | 4.73e-33 | 118 |
MS.gene93155.t1 | AT2G44610 | 38.994 | 159 | 94 | 3 | 18 | 175 | 10 | 166 | 1.54e-32 | 117 |
MS.gene93155.t1 | AT5G45130 | 34.872 | 195 | 118 | 6 | 21 | 214 | 22 | 208 | 2.74e-32 | 116 |
MS.gene93155.t1 | AT2G22290 | 39.623 | 159 | 93 | 3 | 18 | 175 | 10 | 166 | 3.01e-32 | 116 |
MS.gene93155.t1 | AT3G18820 | 39.024 | 164 | 92 | 5 | 17 | 173 | 8 | 170 | 3.76e-29 | 108 |
MS.gene93155.t1 | AT5G64990 | 37.821 | 156 | 94 | 3 | 18 | 172 | 8 | 161 | 6.98e-29 | 107 |
MS.gene93155.t1 | AT1G52280 | 35.149 | 202 | 105 | 6 | 17 | 211 | 8 | 190 | 9.82e-29 | 107 |
MS.gene93155.t1 | AT4G09720 | 39.264 | 163 | 91 | 5 | 17 | 172 | 8 | 169 | 2.35e-28 | 106 |
MS.gene93155.t1 | AT1G22740 | 38.037 | 163 | 93 | 5 | 17 | 172 | 8 | 169 | 3.77e-28 | 105 |
MS.gene93155.t1 | AT3G16100 | 35.149 | 202 | 105 | 6 | 17 | 211 | 8 | 190 | 8.92e-28 | 104 |
MS.gene93155.t1 | AT4G09720 | 38.690 | 168 | 90 | 6 | 17 | 172 | 8 | 174 | 9.85e-28 | 104 |
MS.gene93155.t1 | AT1G49300 | 38.037 | 163 | 93 | 5 | 17 | 172 | 8 | 169 | 1.16e-27 | 104 |
MS.gene93155.t1 | AT1G49300 | 38.037 | 163 | 93 | 5 | 17 | 172 | 8 | 169 | 1.16e-27 | 104 |
MS.gene93155.t1 | AT5G39620 | 37.647 | 170 | 98 | 5 | 18 | 180 | 6 | 174 | 2.04e-27 | 103 |
MS.gene93155.t1 | AT2G21880 | 37.805 | 164 | 92 | 6 | 17 | 172 | 9 | 170 | 7.85e-27 | 102 |
MS.gene93155.t1 | AT4G09720 | 36.782 | 174 | 91 | 6 | 17 | 172 | 8 | 180 | 1.01e-26 | 102 |
MS.gene93155.t1 | AT5G55080 | 39.024 | 164 | 92 | 6 | 18 | 179 | 14 | 171 | 2.74e-26 | 101 |
MS.gene93155.t1 | AT5G64990 | 36.196 | 163 | 94 | 4 | 18 | 172 | 8 | 168 | 3.79e-26 | 100 |
MS.gene93155.t1 | AT5G59150 | 38.211 | 123 | 74 | 2 | 57 | 179 | 2 | 122 | 1.89e-25 | 97.8 |
MS.gene93155.t1 | AT4G19640 | 39.844 | 128 | 74 | 3 | 19 | 145 | 12 | 137 | 8.58e-25 | 95.5 |
MS.gene93155.t1 | AT4G19640 | 39.098 | 133 | 78 | 3 | 19 | 150 | 12 | 142 | 1.54e-24 | 96.3 |
MS.gene93155.t1 | AT2G44690 | 31.667 | 180 | 108 | 5 | 17 | 184 | 18 | 194 | 1.55e-24 | 96.7 |
MS.gene93155.t1 | AT5G20010 | 35.789 | 190 | 105 | 8 | 7 | 185 | 2 | 185 | 3.43e-24 | 95.9 |
MS.gene93155.t1 | AT5G55190 | 37.356 | 174 | 100 | 7 | 9 | 179 | 4 | 171 | 5.13e-24 | 95.5 |
MS.gene93155.t1 | AT5G20020 | 36.932 | 176 | 102 | 7 | 7 | 179 | 2 | 171 | 7.18e-24 | 95.1 |
MS.gene93155.t1 | AT4G35020 | 30.168 | 179 | 110 | 5 | 17 | 183 | 6 | 181 | 9.75e-23 | 91.7 |
MS.gene93155.t1 | AT4G35020 | 30.168 | 179 | 110 | 5 | 17 | 183 | 6 | 181 | 9.75e-23 | 91.7 |
MS.gene93155.t1 | AT4G35020 | 30.168 | 179 | 110 | 5 | 17 | 183 | 6 | 181 | 9.75e-23 | 91.7 |
MS.gene93155.t1 | AT3G51300 | 31.034 | 174 | 105 | 5 | 19 | 180 | 8 | 178 | 1.32e-22 | 91.3 |
MS.gene93155.t1 | AT3G48040 | 30.526 | 190 | 113 | 7 | 8 | 185 | 2 | 184 | 7.28e-22 | 89.4 |
MS.gene93155.t1 | AT4G28950 | 29.379 | 177 | 112 | 5 | 17 | 183 | 6 | 179 | 1.01e-21 | 89.0 |
MS.gene93155.t1 | AT2G17800 | 30.114 | 176 | 108 | 5 | 17 | 180 | 6 | 178 | 2.14e-21 | 87.8 |
MS.gene93155.t1 | AT2G17800 | 30.114 | 176 | 108 | 5 | 17 | 180 | 6 | 178 | 2.14e-21 | 87.8 |
MS.gene93155.t1 | AT4G09720 | 40.458 | 131 | 71 | 4 | 48 | 172 | 6 | 135 | 2.28e-21 | 87.4 |
MS.gene93155.t1 | AT4G09720 | 40.458 | 131 | 71 | 4 | 48 | 172 | 6 | 135 | 2.28e-21 | 87.4 |
MS.gene93155.t1 | AT4G09720 | 40.458 | 131 | 71 | 4 | 48 | 172 | 6 | 135 | 2.28e-21 | 87.4 |
MS.gene93155.t1 | AT1G20090 | 29.545 | 176 | 109 | 5 | 17 | 180 | 5 | 177 | 2.32e-21 | 87.8 |
MS.gene93155.t1 | AT1G75840 | 29.545 | 176 | 109 | 5 | 17 | 180 | 6 | 178 | 2.96e-21 | 87.4 |
MS.gene93155.t1 | AT4G35950 | 29.545 | 176 | 109 | 5 | 17 | 180 | 6 | 178 | 1.13e-20 | 85.9 |
MS.gene93155.t1 | AT5G62880 | 29.189 | 185 | 113 | 6 | 8 | 180 | 2 | 180 | 3.74e-20 | 85.1 |
MS.gene93155.t1 | AT5G45970 | 28.488 | 172 | 108 | 5 | 17 | 176 | 6 | 174 | 6.86e-20 | 84.0 |
MS.gene93155.t1 | AT3G48040 | 30.939 | 181 | 106 | 7 | 8 | 175 | 2 | 176 | 9.28e-20 | 83.2 |
MS.gene93155.t1 | AT2G21880 | 38.636 | 132 | 72 | 5 | 48 | 172 | 16 | 145 | 1.42e-19 | 82.8 |
MS.gene93155.t1 | AT2G21880 | 38.636 | 132 | 72 | 5 | 48 | 172 | 16 | 145 | 1.42e-19 | 82.8 |
MS.gene93155.t1 | AT2G21880 | 32.927 | 164 | 92 | 7 | 17 | 172 | 9 | 162 | 1.43e-17 | 78.2 |
MS.gene93155.t1 | AT5G62880 | 30.000 | 170 | 101 | 6 | 8 | 165 | 2 | 165 | 1.94e-17 | 77.4 |
MS.gene93155.t1 | AT3G51290 | 29.605 | 152 | 93 | 4 | 40 | 180 | 631 | 779 | 2.03e-15 | 74.7 |
MS.gene93155.t1 | AT4G35020 | 34.483 | 116 | 72 | 3 | 19 | 133 | 8 | 120 | 3.12e-15 | 70.5 |
MS.gene93155.t1 | AT4G35020 | 34.483 | 116 | 72 | 3 | 19 | 133 | 8 | 120 | 3.12e-15 | 70.5 |
MS.gene93155.t1 | AT5G46025 | 35.577 | 104 | 66 | 1 | 78 | 181 | 6 | 108 | 3.34e-15 | 69.3 |
MS.gene93155.t1 | AT5G37680 | 29.545 | 176 | 97 | 9 | 14 | 176 | 16 | 177 | 1.15e-12 | 64.3 |
MS.gene93155.t1 | AT3G49870 | 32.934 | 167 | 95 | 9 | 18 | 176 | 1 | 158 | 2.37e-12 | 63.2 |
MS.gene93155.t1 | AT3G49870 | 32.749 | 171 | 98 | 9 | 14 | 176 | 16 | 177 | 3.94e-12 | 62.8 |
MS.gene93155.t1 | AT5G67560 | 32.749 | 171 | 98 | 9 | 14 | 176 | 16 | 177 | 4.10e-12 | 62.8 |
MS.gene93155.t1 | AT5G64813 | 28.221 | 163 | 87 | 6 | 19 | 153 | 24 | 184 | 8.29e-11 | 60.8 |
MS.gene93155.t1 | AT5G64813 | 28.221 | 163 | 87 | 6 | 19 | 153 | 24 | 184 | 8.29e-11 | 60.8 |
MS.gene93155.t1 | AT5G64813 | 28.221 | 163 | 87 | 6 | 19 | 153 | 24 | 184 | 8.29e-11 | 60.8 |
MS.gene93155.t1 | AT3G22950 | 28.244 | 131 | 87 | 3 | 18 | 148 | 18 | 141 | 8.85e-11 | 59.3 |
MS.gene93155.t1 | AT3G22950 | 28.244 | 131 | 87 | 3 | 18 | 148 | 18 | 141 | 8.85e-11 | 59.3 |
Find 39 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTATGATTGGTGATTC+TGG | 0.217855 | 1.3:+15413974 | MS.gene93155:CDS |
TTACAAATCTATCTGATATA+TGG | 0.238643 | 1.3:+15416940 | MS.gene93155:CDS |
AGAAGTTAAAACTTGCTATA+TGG | 0.282325 | 1.3:+15415450 | MS.gene93155:CDS |
GAAAGGTTTCGAACACTTAC+TGG | 0.285773 | 1.3:+15415592 | MS.gene93155:CDS |
GTGGACTTTGCAAGGCAATA+TGG | 0.296394 | 1.3:+15417186 | MS.gene93155:CDS |
CTCCTGGCTGAGGGCTCATC+TGG | 0.330734 | 1.3:+15417569 | MS.gene93155:CDS |
AGGTGCACAAGGAATAATTA+TGG | 0.331547 | 1.3:+15415627 | MS.gene93155:CDS |
TGAAAGGGCTGTTACCAAAA+AGG | 0.345224 | 1.3:+15417158 | MS.gene93155:CDS |
AATGGATGTTTCTTCTTCTT+CGG | 0.349573 | 1.3:+15413916 | None:intergenic |
GAAGTTAAAACTTGCTATAT+GGG | 0.357838 | 1.3:+15415451 | MS.gene93155:CDS |
GAAGATCTTTCTCCCACTAT+TGG | 0.364166 | 1.3:+15414043 | MS.gene93155:CDS |
TTGTTCAAGCTTCTTATGAT+TGG | 0.383844 | 1.3:+15413965 | MS.gene93155:CDS |
GATTGCATCAAGATGCTTGT+TGG | 0.386118 | 1.3:+15416996 | MS.gene93155:CDS |
TACAAATCTATCTGATATAT+GGG | 0.407172 | 1.3:+15416941 | MS.gene93155:CDS |
TTCTTCTCGTGCAGCTGGAC+AGG | 0.417456 | 1.3:+15415570 | MS.gene93155:intron |
GTTAAATATGTTACACTTGG+TGG | 0.437372 | 1.3:+15415425 | MS.gene93155:CDS |
TACACCAAGCCTCCTGGCTG+AGG | 0.454373 | 1.3:+15417559 | MS.gene93155:CDS |
ATGATTGGTGATTCTGGTGT+TGG | 0.454677 | 1.3:+15413980 | MS.gene93155:CDS |
TGGACTTTGCAAGGCAATAT+GGG | 0.468552 | 1.3:+15417187 | MS.gene93155:CDS |
GAGCCCTCAGCCAGGAGGCT+TGG | 0.469370 | 1.3:-15417563 | None:intergenic |
GGTGCACAAGGAATAATTAT+GGG | 0.473429 | 1.3:+15415628 | MS.gene93155:CDS |
CTTACTGGTTCATATTATAG+AGG | 0.473869 | 1.3:+15415607 | MS.gene93155:CDS |
TTGCACTGCATTCAGTATAG+AGG | 0.489926 | 1.3:-15417212 | None:intergenic |
TTTGGATACACCAAGCCTCC+TGG | 0.503438 | 1.3:+15417553 | MS.gene93155:CDS |
CACCTAGCAGCTGTTGCTCA+TGG | 0.531342 | 1.3:+15417639 | MS.gene93155:CDS |
CACCAGATGAGCCCTCAGCC+AGG | 0.548724 | 1.3:-15417571 | None:intergenic |
AGGAAGCGGTGGACTTTGCA+AGG | 0.556741 | 1.3:+15417178 | MS.gene93155:CDS |
AAAGTTAAATATGTTACACT+TGG | 0.573517 | 1.3:+15415422 | MS.gene93155:CDS |
CACCATGAGCAACAGCTGCT+AGG | 0.588474 | 1.3:-15417641 | None:intergenic |
GGTGATGCATCAGACTCTTG+CGG | 0.604993 | 1.3:-15417620 | None:intergenic |
ACACCAAGCCTCCTGGCTGA+GGG | 0.615958 | 1.3:+15417560 | MS.gene93155:CDS |
TTTGTGGACAAACCAATAGT+GGG | 0.616040 | 1.3:-15414055 | None:intergenic |
CTCGTGCAGCTGGACAGGAA+AGG | 0.620766 | 1.3:+15415575 | MS.gene93155:intron |
AAACTTGCTATATGGGACAC+GGG | 0.627855 | 1.3:+15415458 | MS.gene93155:CDS |
AAAACTTGCTATATGGGACA+CGG | 0.637080 | 1.3:+15415457 | MS.gene93155:CDS |
TCATATTATAGAGGTGCACA+AGG | 0.659834 | 1.3:+15415616 | MS.gene93155:CDS |
TGTTGGAAACAAAGTTGACA+AGG | 0.666842 | 1.3:+15417013 | MS.gene93155:CDS |
CAGATGAGCCCTCAGCCAGG+AGG | 0.684281 | 1.3:-15417568 | None:intergenic |
GAACAAGTAATCGAACTCAG+CGG | 0.788131 | 1.3:-15413948 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAATTTATATTGCATT+GGG | + | chr1.3:15415233-15415252 | MS.gene93155:intron | 15.0% |
!! | TAAACAAATTTATATTGCAT+TGG | + | chr1.3:15415232-15415251 | MS.gene93155:intron | 15.0% |
!!! | AGTATTTCTTTTTATAAGAT+AGG | + | chr1.3:15416384-15416403 | MS.gene93155:intron | 15.0% |
!!! | CATATCATTATTATTTTAGA+AGG | - | chr1.3:15415955-15415974 | None:intergenic | 15.0% |
!!! | GTATTTCTTTTTATAAGATA+GGG | + | chr1.3:15416385-15416404 | MS.gene93155:intron | 15.0% |
!!! | TGAAATTCTGTTATTTTTTT+GGG | + | chr1.3:15415517-15415536 | MS.gene93155:intron | 15.0% |
!!! | TTATTATTTTCATGTTTTTG+AGG | - | chr1.3:15417309-15417328 | None:intergenic | 15.0% |
!!! | TTGAAATTCTGTTATTTTTT+TGG | + | chr1.3:15415516-15415535 | MS.gene93155:intron | 15.0% |
!! | AAAATTGTACATCATATTCA+TGG | - | chr1.3:15415711-15415730 | None:intergenic | 20.0% |
!! | AAAGTTAAATATGTTACACT+TGG | + | chr1.3:15415422-15415441 | MS.gene93155:CDS | 20.0% |
!! | AACAAATTTATATTGCATTG+GGG | + | chr1.3:15415234-15415253 | MS.gene93155:intron | 20.0% |
!! | ATAGTAAACAAGCTAAAAAA+AGG | - | chr1.3:15415055-15415074 | None:intergenic | 20.0% |
!! | ATCAATAACATTGGTATTAT+AGG | - | chr1.3:15416198-15416217 | None:intergenic | 20.0% |
!! | CATATATGGATATAAAGATT+GGG | + | chr1.3:15416425-15416444 | MS.gene93155:intron | 20.0% |
!! | TACAAATCTATCTGATATAT+GGG | + | chr1.3:15416941-15416960 | MS.gene93155:CDS | 20.0% |
!! | TACGTCTATATTAACATTAT+AGG | - | chr1.3:15415214-15415233 | None:intergenic | 20.0% |
!! | TATAATACCAATGTTATTGA+TGG | + | chr1.3:15416197-15416216 | MS.gene93155:intron | 20.0% |
!! | TCAATAACATTGGTATTATA+GGG | - | chr1.3:15416197-15416216 | None:intergenic | 20.0% |
!! | TTACAAATCTATCTGATATA+TGG | + | chr1.3:15416940-15416959 | MS.gene93155:CDS | 20.0% |
!!! | AACTATGAAAGTATAATAAC+AGG | - | chr1.3:15415860-15415879 | None:intergenic | 20.0% |
!!! | AGTGTATTACTTTTTTCAAA+AGG | + | chr1.3:15416034-15416053 | MS.gene93155:intron | 20.0% |
!!! | TAAAAGCATTCAAACAAATT+AGG | - | chr1.3:15415736-15415755 | None:intergenic | 20.0% |
!!! | TTATTGTATCTTTTGCTTTT+TGG | + | chr1.3:15416720-15416739 | MS.gene93155:intron | 20.0% |
! | AAACTGACTGATAGATAAAT+GGG | - | chr1.3:15416853-15416872 | None:intergenic | 25.0% |
! | ACTTTCCTAAAATATGAGAT+AGG | - | chr1.3:15417139-15417158 | None:intergenic | 25.0% |
! | ATAAACTTATCAGTGAATCT+GGG | + | chr1.3:15416878-15416897 | MS.gene93155:intron | 25.0% |
! | ATCCAAAATGCATGAATAAA+AGG | - | chr1.3:15414114-15414133 | None:intergenic | 25.0% |
! | ATTACATTTAGAAGCAAAAC+AGG | - | chr1.3:15416801-15416820 | None:intergenic | 25.0% |
! | GACTAATAACTAATTCTTCA+GGG | + | chr1.3:15416579-15416598 | MS.gene93155:intron | 25.0% |
! | GCATATATGGATATAAAGAT+TGG | + | chr1.3:15416424-15416443 | MS.gene93155:intron | 25.0% |
! | TAAACTGACTGATAGATAAA+TGG | - | chr1.3:15416854-15416873 | None:intergenic | 25.0% |
! | TACTAAAGTCATTGCATATA+TGG | + | chr1.3:15416411-15416430 | MS.gene93155:intron | 25.0% |
! | TACTTTAACCTATAATTGAG+TGG | - | chr1.3:15415345-15415364 | None:intergenic | 25.0% |
! | TATAAACTTATCAGTGAATC+TGG | + | chr1.3:15416877-15416896 | MS.gene93155:intron | 25.0% |
! | TATACAGTGTTGTCAAATAT+CGG | - | chr1.3:15416340-15416359 | None:intergenic | 25.0% |
! | TCAAAACTTAACACAAAGTT+TGG | - | chr1.3:15417079-15417098 | None:intergenic | 25.0% |
! | TGACTAATAACTAATTCTTC+AGG | + | chr1.3:15416578-15416597 | MS.gene93155:intron | 25.0% |
! | TGATAAGTTTAACTACTTGA+AGG | - | chr1.3:15417423-15417442 | None:intergenic | 25.0% |
! | TGATGTGAAATTCTATCAAA+TGG | + | chr1.3:15414983-15415002 | MS.gene93155:intron | 25.0% |
! | TGATTAAGAGTTACATAAAG+TGG | + | chr1.3:15414270-15414289 | MS.gene93155:intron | 25.0% |
! | TGCAAATGCAAATTCATAAA+TGG | - | chr1.3:15417043-15417062 | None:intergenic | 25.0% |
! | TGTTTCATCCAAAATATTGA+CGG | - | chr1.3:15416067-15416086 | None:intergenic | 25.0% |
! | TTCACAAGAAAAAATTGTCA+AGG | - | chr1.3:15417379-15417398 | None:intergenic | 25.0% |
! | TTTAAGAATTGAGTGTAAGA+TGG | - | chr1.3:15415191-15415210 | None:intergenic | 25.0% |
! | TTTACCATAAAAACACACAA+GGG | - | chr1.3:15415819-15415838 | None:intergenic | 25.0% |
!! | AAATCAGTATTTTCAGAAAG+TGG | + | chr1.3:15417488-15417507 | MS.gene93155:intron | 25.0% |
!! | GGAAGTAATGTTTCAATTTT+GGG | + | chr1.3:15417509-15417528 | MS.gene93155:intron | 25.0% |
!! | TGGAAGTAATGTTTCAATTT+TGG | + | chr1.3:15417508-15417527 | MS.gene93155:intron | 25.0% |
!! | TGTTACTAAGTTTCTCATTT+TGG | + | chr1.3:15416138-15416157 | MS.gene93155:intron | 25.0% |
!! | TTCCTTTTATTCATGCATTT+TGG | + | chr1.3:15414109-15414128 | MS.gene93155:intron | 25.0% |
!! | TTTTACCATAAAAACACACA+AGG | - | chr1.3:15415820-15415839 | None:intergenic | 25.0% |
!!! | AGAAGTTAAAACTTGCTATA+TGG | + | chr1.3:15415450-15415469 | MS.gene93155:CDS | 25.0% |
!!! | AGACTTATTGTACTTTTTCA+CGG | + | chr1.3:15414825-15414844 | MS.gene93155:intron | 25.0% |
!!! | CATATTTTAGGAAAGTGAAA+GGG | + | chr1.3:15417143-15417162 | MS.gene93155:intron | 25.0% |
!!! | CGTACTATTAACATTGATTT+TGG | + | chr1.3:15414195-15414214 | MS.gene93155:intron | 25.0% |
!!! | GAAATAAAATCGATTAGCTT+AGG | - | chr1.3:15415894-15415913 | None:intergenic | 25.0% |
!!! | GAAGTTAAAACTTGCTATAT+GGG | + | chr1.3:15415451-15415470 | MS.gene93155:CDS | 25.0% |
!!! | TAACATTGATTTTGGTTCTA+CGG | + | chr1.3:15414203-15414222 | MS.gene93155:intron | 25.0% |
!!! | TCAATATTTTGGATGAAACA+TGG | + | chr1.3:15416067-15416086 | MS.gene93155:intron | 25.0% |
!!! | TCATATTTTAGGAAAGTGAA+AGG | + | chr1.3:15417142-15417161 | MS.gene93155:intron | 25.0% |
!!! | TCGATTTTATTTCGAAATTC+AGG | + | chr1.3:15415901-15415920 | MS.gene93155:intron | 25.0% |
!!! | TTTTGGCATTTGATAATCAT+TGG | + | chr1.3:15416155-15416174 | MS.gene93155:intron | 25.0% |
AAAGCTGAATAGTGAATTCA+AGG | + | chr1.3:15416679-15416698 | MS.gene93155:intron | 30.0% | |
AAGAAGCCATATGAATGTTA+CGG | + | chr1.3:15415282-15415301 | MS.gene93155:intron | 30.0% | |
AAGATATTGCATGAATGTAG+GGG | + | chr1.3:15414943-15414962 | MS.gene93155:intron | 30.0% | |
AAGCTGAATAGTGAATTCAA+GGG | + | chr1.3:15416680-15416699 | MS.gene93155:intron | 30.0% | |
AATACCAATGTTATTGATGG+CGG | + | chr1.3:15416200-15416219 | MS.gene93155:intron | 30.0% | |
AATGACAAATTTGTGAAGGA+TGG | - | chr1.3:15416271-15416290 | None:intergenic | 30.0% | |
AATTTAAGGAATCAGAATCG+TGG | + | chr1.3:15415153-15415172 | MS.gene93155:intron | 30.0% | |
AATTTATATTGCATTGGGGA+AGG | + | chr1.3:15415238-15415257 | MS.gene93155:intron | 30.0% | |
AGAGTTACATAAAGTGGTTT+AGG | + | chr1.3:15414276-15414295 | MS.gene93155:intron | 30.0% | |
CAAATCTTCTGTATTTGCAT+AGG | - | chr1.3:15416120-15416139 | None:intergenic | 30.0% | |
CAAGAAAAAATTGTCAAGGA+AGG | - | chr1.3:15417375-15417394 | None:intergenic | 30.0% | |
CAAGATATTGCATGAATGTA+GGG | + | chr1.3:15414942-15414961 | MS.gene93155:intron | 30.0% | |
CATATGGCTTCTTAAATGAA+AGG | - | chr1.3:15415275-15415294 | None:intergenic | 30.0% | |
CATATTGTACATACATCTTG+AGG | - | chr1.3:15416634-15416653 | None:intergenic | 30.0% | |
CCATACCAAAATCAAACTTA+CGG | - | chr1.3:15414421-15414440 | None:intergenic | 30.0% | |
CCTCAAATGTGATTAATGTT+CGG | - | chr1.3:15414566-15414585 | None:intergenic | 30.0% | |
GTACTTAAAACCTCAAATCT+AGG | + | chr1.3:15416468-15416487 | MS.gene93155:intron | 30.0% | |
GTTAAATATGTTACACTTGG+TGG | + | chr1.3:15415425-15415444 | MS.gene93155:CDS | 30.0% | |
TAACCTATAATTGAGTGGTA+GGG | - | chr1.3:15415340-15415359 | None:intergenic | 30.0% | |
TGATTTCAGGAAGCTAATAA+AGG | + | chr1.3:15414723-15414742 | MS.gene93155:intron | 30.0% | |
TTAACCTATAATTGAGTGGT+AGG | - | chr1.3:15415341-15415360 | None:intergenic | 30.0% | |
TTGTTCAAGCTTCTTATGAT+TGG | + | chr1.3:15413965-15413984 | MS.gene93155:CDS | 30.0% | |
TTTAGAAGGAAATGTACAAG+AGG | - | chr1.3:15415941-15415960 | None:intergenic | 30.0% | |
! | AAATTTGTCATTGCGGTTTT+CGG | + | chr1.3:15416279-15416298 | MS.gene93155:intron | 30.0% |
! | ACTAACCAAAACGTGATTTT+TGG | + | chr1.3:15414613-15414632 | MS.gene93155:intron | 30.0% |
! | ACTTTGAAAGCTTAAACTGT+CGG | + | chr1.3:15416519-15416538 | MS.gene93155:intron | 30.0% |
! | AGTCAAATGTGATTTGACTT+CGG | - | chr1.3:15414596-15414615 | None:intergenic | 30.0% |
! | ATCATGAAAGTGTGAAAACA+AGG | - | chr1.3:15414083-15414102 | None:intergenic | 30.0% |
! | ATTGATTCTGACATAAAGCT+AGG | + | chr1.3:15414470-15414489 | MS.gene93155:intron | 30.0% |
! | CAAAGTATTTGATCATGACA+TGG | - | chr1.3:15416505-15416524 | None:intergenic | 30.0% |
! | GAAATATGCCGTCAATATTT+TGG | + | chr1.3:15416056-15416075 | MS.gene93155:intron | 30.0% |
! | GTTTGCCTATCTCATATTTT+AGG | + | chr1.3:15417131-15417150 | MS.gene93155:intron | 30.0% |
! | TCATGAAAGTGTGAAAACAA+GGG | - | chr1.3:15414082-15414101 | None:intergenic | 30.0% |
! | TTATTAGCTTCCTGAAATCA+CGG | - | chr1.3:15414723-15414742 | None:intergenic | 30.0% |
!! | AAGTTTGATTTTGGTATGGT+CGG | + | chr1.3:15414422-15414441 | MS.gene93155:intron | 30.0% |
!! | CTTACTGGTTCATATTATAG+AGG | + | chr1.3:15415607-15415626 | MS.gene93155:CDS | 30.0% |
!! | TGATATGTTCATTTTCAAGC+TGG | + | chr1.3:15415968-15415987 | MS.gene93155:intron | 30.0% |
!! | TTATCCCTTGTGTGTTTTTA+TGG | + | chr1.3:15415812-15415831 | MS.gene93155:intron | 30.0% |
!!! | ATTCTTTTTCGAGATTGAAG+TGG | + | chr1.3:15416000-15416019 | MS.gene93155:intron | 30.0% |
!!! | CATGCTGATTCAGTTTATTT+TGG | + | chr1.3:15415489-15415508 | MS.gene93155:intron | 30.0% |
!!! | TCTGTGTTTTTTCAATGTAG+TGG | + | chr1.3:15414140-15414159 | MS.gene93155:intron | 30.0% |
AATAAGTCTTCGCATCTGTT+TGG | - | chr1.3:15414814-15414833 | None:intergenic | 35.0% | |
AATAGTGAATTCAAGGGTCA+AGG | + | chr1.3:15416686-15416705 | MS.gene93155:intron | 35.0% | |
AGATATTGCATGAATGTAGG+GGG | + | chr1.3:15414944-15414963 | MS.gene93155:intron | 35.0% | |
AGGTGCACAAGGAATAATTA+TGG | + | chr1.3:15415627-15415646 | MS.gene93155:CDS | 35.0% | |
ATATTCATGGTATAGCAAGC+AGG | - | chr1.3:15415698-15415717 | None:intergenic | 35.0% | |
ATCTTCTGTATTTGCATAGG+AGG | - | chr1.3:15416117-15416136 | None:intergenic | 35.0% | |
ATTCAAACATGCACTCAAAG+TGG | - | chr1.3:15414391-15414410 | None:intergenic | 35.0% | |
ATTCTATCAAATGGCATCAG+TGG | + | chr1.3:15414992-15415011 | MS.gene93155:intron | 35.0% | |
CACAAACCGTAACATTCATA+TGG | - | chr1.3:15415291-15415310 | None:intergenic | 35.0% | |
CCAAAATCTGGAAACAACAA+AGG | - | chr1.3:15417538-15417557 | None:intergenic | 35.0% | |
CCATGATTTCAAGAAGAACA+TGG | + | chr1.3:15414773-15414792 | MS.gene93155:intron | 35.0% | |
CCATGTTCTTCTTGAAATCA+TGG | - | chr1.3:15414776-15414795 | None:intergenic | 35.0% | |
CCGAACATTAATCACATTTG+AGG | + | chr1.3:15414563-15414582 | MS.gene93155:intron | 35.0% | |
CCTTCACAAATTTGTCATTG+CGG | + | chr1.3:15416272-15416291 | MS.gene93155:intron | 35.0% | |
CTACGAAATGGAGAATATCA+AGG | - | chr1.3:15415667-15415686 | None:intergenic | 35.0% | |
CTTAAAACCTCAAATCTAGG+AGG | + | chr1.3:15416471-15416490 | MS.gene93155:intron | 35.0% | |
GAACTGTAAATCATGCAACA+TGG | + | chr1.3:15415763-15415782 | MS.gene93155:intron | 35.0% | |
GCAAGATATTGCATGAATGT+AGG | + | chr1.3:15414941-15414960 | MS.gene93155:intron | 35.0% | |
GGTGCACAAGGAATAATTAT+GGG | + | chr1.3:15415628-15415647 | MS.gene93155:CDS | 35.0% | |
TAACTAATTCTTCAGGGTCA+AGG | + | chr1.3:15416585-15416604 | MS.gene93155:intron | 35.0% | |
TGTTGGAAACAAAGTTGACA+AGG | + | chr1.3:15417013-15417032 | MS.gene93155:CDS | 35.0% | |
TTTGTGGACAAACCAATAGT+GGG | - | chr1.3:15414058-15414077 | None:intergenic | 35.0% | |
! | AAATGTTGAGCAGTGTTTTG+AGG | + | chr1.3:15417245-15417264 | MS.gene93155:CDS | 35.0% |
! | CTTCTTATGATTGGTGATTC+TGG | + | chr1.3:15413974-15413993 | MS.gene93155:CDS | 35.0% |
! | CTTTGAAAGCTTAAACTGTC+GGG | + | chr1.3:15416520-15416539 | MS.gene93155:intron | 35.0% |
! | GACTCTTTTGAACATAATGC+AGG | + | chr1.3:15415389-15415408 | MS.gene93155:intron | 35.0% |
! | TCATATTATAGAGGTGCACA+AGG | + | chr1.3:15415616-15415635 | MS.gene93155:CDS | 35.0% |
! | TTTTGTGGACAAACCAATAG+TGG | - | chr1.3:15414059-15414078 | None:intergenic | 35.0% |
!! | AAAACTTGCTATATGGGACA+CGG | + | chr1.3:15415457-15415476 | MS.gene93155:CDS | 35.0% |
!! | AACCAAAACGTGATTTTTGG+AGG | + | chr1.3:15414616-15414635 | MS.gene93155:intron | 35.0% |
!! | CCGTAAGTTTGATTTTGGTA+TGG | + | chr1.3:15414418-15414437 | MS.gene93155:intron | 35.0% |
!! | TGAAGCCGTAAGTTTGATTT+TGG | + | chr1.3:15414413-15414432 | MS.gene93155:intron | 35.0% |
!! | TTCATGTTTTTGAGGACATG+AGG | - | chr1.3:15417301-15417320 | None:intergenic | 35.0% |
!! | TTTTGAGGAGCTTGTAATGA+AGG | + | chr1.3:15417260-15417279 | MS.gene93155:CDS | 35.0% |
!!! | CCTTTGTTGTTTCCAGATTT+TGG | + | chr1.3:15417535-15417554 | MS.gene93155:intron | 35.0% |
AAAGAGCTTCTCTCTCATAG+TGG | + | chr1.3:15415119-15415138 | MS.gene93155:intron | 40.0% | |
AAAGGACATGTGAGACAACA+AGG | - | chr1.3:15415037-15415056 | None:intergenic | 40.0% | |
AAGAGCTTCTCTCTCATAGT+GGG | + | chr1.3:15415120-15415139 | MS.gene93155:intron | 40.0% | |
AGGAAGCTTCTGTAGTAATG+CGG | + | chr1.3:15414743-15414762 | MS.gene93155:intron | 40.0% | |
ATCATAGCCTCCTAGATTTG+AGG | - | chr1.3:15416481-15416500 | None:intergenic | 40.0% | |
CATCCCTACCACTCAATTAT+AGG | + | chr1.3:15415334-15415353 | MS.gene93155:intron | 40.0% | |
CCGCAATGACAAATTTGTGA+AGG | - | chr1.3:15416275-15416294 | None:intergenic | 40.0% | |
CTAGACTTGGAACCAAATGT+GGG | + | chr1.3:15414640-15414659 | MS.gene93155:intron | 40.0% | |
CTTTCCGCCATCAATAACAT+TGG | - | chr1.3:15416207-15416226 | None:intergenic | 40.0% | |
GAAAGGTTTCGAACACTTAC+TGG | + | chr1.3:15415592-15415611 | MS.gene93155:CDS | 40.0% | |
GAACAAGTAATCGAACTCAG+CGG | - | chr1.3:15413951-15413970 | None:intergenic | 40.0% | |
GAAGATCTTTCTCCCACTAT+TGG | + | chr1.3:15414043-15414062 | MS.gene93155:CDS | 40.0% | |
GACAAATTTGTGAAGGATGG+CGG | - | chr1.3:15416268-15416287 | None:intergenic | 40.0% | |
GATTGCATCAAGATGCTTGT+TGG | + | chr1.3:15416996-15417015 | MS.gene93155:CDS | 40.0% | |
GCAACTAACTTGAAGCAAGT+AGG | - | chr1.3:15417459-15417478 | None:intergenic | 40.0% | |
GGGATGATAAAACAGCATCA+TGG | - | chr1.3:15415320-15415339 | None:intergenic | 40.0% | |
TCTAGACTTGGAACCAAATG+TGG | + | chr1.3:15414639-15414658 | MS.gene93155:intron | 40.0% | |
TGAAAGGGCTGTTACCAAAA+AGG | + | chr1.3:15417158-15417177 | MS.gene93155:CDS | 40.0% | |
TGAATGTTACGGTTTGTGTG+TGG | + | chr1.3:15415293-15415312 | MS.gene93155:intron | 40.0% | |
TGGACTTTGCAAGGCAATAT+GGG | + | chr1.3:15417187-15417206 | MS.gene93155:CDS | 40.0% | |
TTGCACTGCATTCAGTATAG+AGG | - | chr1.3:15417215-15417234 | None:intergenic | 40.0% | |
! | ATGATTGGTGATTCTGGTGT+TGG | + | chr1.3:15413980-15413999 | MS.gene93155:CDS | 40.0% |
! | GACCTCCAAAAATCACGTTT+TGG | - | chr1.3:15414621-15414640 | None:intergenic | 40.0% |
! | GTGTGAAAACAAGGGTTTTG+TGG | - | chr1.3:15414074-15414093 | None:intergenic | 40.0% |
!! | AAACTTGCTATATGGGACAC+GGG | + | chr1.3:15415458-15415477 | MS.gene93155:CDS | 40.0% |
!! | AACTCAAGCTTGCTGAAAGT+TGG | + | chr1.3:15417332-15417351 | MS.gene93155:intron | 40.0% |
!! | CGATTAGCTTAGGCTATACA+TGG | - | chr1.3:15415884-15415903 | None:intergenic | 40.0% |
!! | GATTTTTGGAGGTCTAGACT+TGG | + | chr1.3:15414627-15414646 | MS.gene93155:intron | 40.0% |
!! | TAGGAGGTTTGGTTTGGTTT+GGG | + | chr1.3:15414883-15414902 | MS.gene93155:intron | 40.0% |
!! | TGGGTGTTGGGAGAAATTTA+AGG | + | chr1.3:15415139-15415158 | MS.gene93155:intron | 40.0% |
AAGCTTAAACTGTCGGGTGA+AGG | + | chr1.3:15416526-15416545 | MS.gene93155:intron | 45.0% | |
CAGGAAAGGTAGCTACGAAA+TGG | - | chr1.3:15415679-15415698 | None:intergenic | 45.0% | |
CATGGTATAGCAAGCAGGAA+AGG | - | chr1.3:15415693-15415712 | None:intergenic | 45.0% | |
CGTCTGTTTGGATCTGTGTT+TGG | + | chr1.3:15414668-15414687 | MS.gene93155:intron | 45.0% | |
CTCGAAAGTTCCCATCTCAA+GGG | - | chr1.3:15414856-15414875 | None:intergenic | 45.0% | |
CTTGAGATGGGAACTTTCGA+GGG | + | chr1.3:15414855-15414874 | MS.gene93155:intron | 45.0% | |
GCATCTGTTTGGATATGCGT+TGG | - | chr1.3:15414803-15414822 | None:intergenic | 45.0% | |
GGCTGTTACCAAAAAGGAAG+CGG | + | chr1.3:15417164-15417183 | MS.gene93155:CDS | 45.0% | |
GTGGACTTTGCAAGGCAATA+TGG | + | chr1.3:15417186-15417205 | MS.gene93155:CDS | 45.0% | |
GTGTTGTCAAATATCGGCCA+TGG | - | chr1.3:15416334-15416353 | None:intergenic | 45.0% | |
GTTCACCTAACGTGTGTTTG+CGG | + | chr1.3:15414692-15414711 | MS.gene93155:intron | 45.0% | |
TGTTACCAAAAAGGAAGCGG+TGG | + | chr1.3:15417167-15417186 | MS.gene93155:CDS | 45.0% | |
TTGTCAAATATCGGCCATGG+CGG | - | chr1.3:15416331-15416350 | None:intergenic | 45.0% | |
! | AAAGTCCACCGCTTCCTTTT+TGG | - | chr1.3:15417175-15417194 | None:intergenic | 45.0% |
! | ATGGCGGAAAGCCAAAAATC+CGG | + | chr1.3:15416216-15416235 | MS.gene93155:intron | 45.0% |
! | GTATTTTCTTCTCGTGCAGC+TGG | + | chr1.3:15415565-15415584 | MS.gene93155:intron | 45.0% |
! | GTTCACTAGGAGGTTTGGTT+TGG | + | chr1.3:15414877-15414896 | MS.gene93155:intron | 45.0% |
!! | AGGAGGTTTGGTTTGGTTTG+GGG | + | chr1.3:15414884-15414903 | MS.gene93155:intron | 45.0% |
!! | CTAGGAGGTTTGGTTTGGTT+TGG | + | chr1.3:15414882-15414901 | MS.gene93155:intron | 45.0% |
!! | GATTTTGGTATGGTCGGACT+CGG | + | chr1.3:15414428-15414447 | MS.gene93155:intron | 45.0% |
!! | GGCTTGGTGTATCCAAAATC+TGG | - | chr1.3:15417550-15417569 | None:intergenic | 45.0% |
!! | GTTTTTGAGGACATGAGGAG+AGG | - | chr1.3:15417296-15417315 | None:intergenic | 45.0% |
!! | TCTCTCTCATAGTGGGTGTT+GGG | + | chr1.3:15415127-15415146 | MS.gene93155:intron | 45.0% |
!! | TTCTCTCTCATAGTGGGTGT+TGG | + | chr1.3:15415126-15415145 | MS.gene93155:intron | 45.0% |
!!! | ATAATATTTTAAATAGATTA+TGG | - | chr1.3:15416770-15416789 | None:intergenic | 5.0% |
ACTTTCGAGGGTTCACTAGG+AGG | + | chr1.3:15414867-15414886 | MS.gene93155:intron | 50.0% | |
CAAAAATCCGGCACATCCGA+CGG | + | chr1.3:15416228-15416247 | MS.gene93155:intron | 50.0% | |
CACGGAAAGACCCTTGAGAT+GGG | + | chr1.3:15414843-15414862 | MS.gene93155:intron | 50.0% | |
CCTCGAAAGTTCCCATCTCA+AGG | - | chr1.3:15414857-15414876 | None:intergenic | 50.0% | |
CCTTGAGATGGGAACTTTCG+AGG | + | chr1.3:15414854-15414873 | MS.gene93155:intron | 50.0% | |
GAATGTAGGGGGAAAGTGAC+AGG | + | chr1.3:15414955-15414974 | MS.gene93155:intron | 50.0% | |
GGAACTTTCGAGGGTTCACT+AGG | + | chr1.3:15414864-15414883 | MS.gene93155:intron | 50.0% | |
GGTGATGCATCAGACTCTTG+CGG | - | chr1.3:15417623-15417642 | None:intergenic | 50.0% | |
TCACGGAAAGACCCTTGAGA+TGG | + | chr1.3:15414842-15414861 | MS.gene93155:intron | 50.0% | |
TCGTTCCGCAAACACACGTT+AGG | - | chr1.3:15414700-15414719 | None:intergenic | 50.0% | |
TTTGGATACACCAAGCCTCC+TGG | + | chr1.3:15417553-15417572 | MS.gene93155:CDS | 50.0% | |
! | TCGGGTGAAGGCACAAAAGA+TGG | + | chr1.3:15416538-15416557 | MS.gene93155:intron | 50.0% |
ACAGACGCTTCGCCCACATT+TGG | - | chr1.3:15414655-15414674 | None:intergenic | 55.0% | |
CACCATGAGCAACAGCTGCT+AGG | - | chr1.3:15417644-15417663 | None:intergenic | 55.0% | |
CACCTAGCAGCTGTTGCTCA+TGG | + | chr1.3:15417639-15417658 | MS.gene93155:CDS | 55.0% | |
CGAGGGTTCACTAGGAGGTT+TGG | + | chr1.3:15414872-15414891 | MS.gene93155:intron | 55.0% | |
GGTCGGACTCGGAACTGATT+TGG | + | chr1.3:15414439-15414458 | MS.gene93155:intron | 55.0% | |
TGCGGAACGACCGTGATTTC+AGG | + | chr1.3:15414710-15414729 | MS.gene93155:intron | 55.0% | |
TTCTTCTCGTGCAGCTGGAC+AGG | + | chr1.3:15415570-15415589 | MS.gene93155:intron | 55.0% | |
! | AGGAAGCGGTGGACTTTGCA+AGG | + | chr1.3:15417178-15417197 | MS.gene93155:CDS | 55.0% |
! | ATGTGGGCGAAGCGTCTGTT+TGG | + | chr1.3:15414656-15414675 | MS.gene93155:intron | 55.0% |
! | CGTCGGATGTGCCGGATTTT+TGG | - | chr1.3:15416230-15416249 | None:intergenic | 55.0% |
!! | CATGGCGGCATAGCGGATAT+CGG | - | chr1.3:15416316-15416335 | None:intergenic | 55.0% |
AATCCGGCACATCCGACGGA+TGG | + | chr1.3:15416232-15416251 | MS.gene93155:intron | 60.0% | |
ACACCAAGCCTCCTGGCTGA+GGG | + | chr1.3:15417560-15417579 | MS.gene93155:CDS | 60.0% | |
CGATATCCGCTATGCCGCCA+TGG | + | chr1.3:15416314-15416333 | MS.gene93155:intron | 60.0% | |
CTCGTGCAGCTGGACAGGAA+AGG | + | chr1.3:15415575-15415594 | MS.gene93155:intron | 60.0% | |
TACACCAAGCCTCCTGGCTG+AGG | + | chr1.3:15417559-15417578 | MS.gene93155:CDS | 60.0% | |
TATCGGCCATGGCGGCATAG+CGG | - | chr1.3:15416323-15416342 | None:intergenic | 60.0% | |
! | ACATCCGACGGATGGTGCTG+TGG | + | chr1.3:15416240-15416259 | MS.gene93155:intron | 60.0% |
!! | GGCATAGCGGATATCGGTGG+CGG | - | chr1.3:15416310-15416329 | None:intergenic | 60.0% |
CACCAGATGAGCCCTCAGCC+AGG | - | chr1.3:15417574-15417593 | None:intergenic | 65.0% | |
CAGATGAGCCCTCAGCCAGG+AGG | - | chr1.3:15417571-15417590 | None:intergenic | 65.0% | |
CTCCTGGCTGAGGGCTCATC+TGG | + | chr1.3:15417569-15417588 | MS.gene93155:CDS | 65.0% | |
GCACCATCCGTCGGATGTGC+CGG | - | chr1.3:15416238-15416257 | None:intergenic | 65.0% | |
GGCACCACAGCACCATCCGT+CGG | - | chr1.3:15416247-15416266 | None:intergenic | 65.0% | |
!! | GGCGGCATAGCGGATATCGG+TGG | - | chr1.3:15416313-15416332 | None:intergenic | 65.0% |
GAGCCCTCAGCCAGGAGGCT+TGG | - | chr1.3:15417566-15417585 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 15413917 | 15417664 | 15413917 | ID=MS.gene93155 |
chr1.3 | mRNA | 15413917 | 15417664 | 15413917 | ID=MS.gene93155.t1;Parent=MS.gene93155 |
chr1.3 | exon | 15413917 | 15414064 | 15413917 | ID=MS.gene93155.t1.exon1;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15413917 | 15414064 | 15413917 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
chr1.3 | exon | 15415411 | 15415479 | 15415411 | ID=MS.gene93155.t1.exon2;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15415411 | 15415479 | 15415411 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
chr1.3 | exon | 15415584 | 15415649 | 15415584 | ID=MS.gene93155.t1.exon3;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15415584 | 15415649 | 15415584 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
chr1.3 | exon | 15416913 | 15417034 | 15416913 | ID=MS.gene93155.t1.exon4;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15416913 | 15417034 | 15416913 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
chr1.3 | exon | 15417153 | 15417281 | 15417153 | ID=MS.gene93155.t1.exon5;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15417153 | 15417281 | 15417153 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
chr1.3 | exon | 15417551 | 15417664 | 15417551 | ID=MS.gene93155.t1.exon6;Parent=MS.gene93155.t1 |
chr1.3 | CDS | 15417551 | 15417664 | 15417551 | ID=cds.MS.gene93155.t1;Parent=MS.gene93155.t1 |
Gene Sequence |
Protein sequence |