AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57390.t1 MTR_8g093740 99.515 206 1 0 1 206 1 206 1.22e-150 423
MS.gene57390.t1 MTR_3g096350 90.777 206 18 1 1 206 1 205 2.54e-136 387
MS.gene57390.t1 MTR_1g029450 87.879 198 23 1 9 205 13 210 7.29e-128 366
MS.gene57390.t1 MTR_8g093740 97.024 168 5 0 39 206 6 173 4.89e-117 337
MS.gene57390.t1 MTR_8g093750 98.193 166 3 0 202 367 64 229 4.37e-114 331
MS.gene57390.t1 MTR_1g062760 67.662 201 65 0 10 210 11 211 8.32e-101 297
MS.gene57390.t1 MTR_7g103070 67.513 197 63 1 11 206 14 210 8.07e-100 295
MS.gene57390.t1 MTR_1g090717 66.667 195 61 2 1 191 1 195 2.86e-89 268
MS.gene57390.t1 MTR_3g096350 88.550 131 14 1 1 131 1 130 1.15e-79 241
MS.gene57390.t1 MTR_3g096350 88.550 131 14 1 1 131 1 130 1.39e-79 241
MS.gene57390.t1 MTR_7g103070 67.974 153 49 0 54 206 2 154 8.98e-79 239
MS.gene57390.t1 MTR_2g005500 50.000 202 96 5 8 206 4 203 1.76e-57 186
MS.gene57390.t1 MTR_7g081700 55.294 170 73 3 9 177 4 171 1.14e-55 181
MS.gene57390.t1 MTR_8g006970 53.714 175 78 3 9 182 4 176 2.20e-55 180
MS.gene57390.t1 MTR_8g006970 54.167 168 74 3 11 177 20 185 3.42e-53 175
MS.gene57390.t1 MTR_1g068740 50.610 164 77 4 7 168 9 170 2.31e-50 168
MS.gene57390.t1 MTR_1g068730 50.610 164 77 4 7 168 9 170 5.60e-50 167
MS.gene57390.t1 MTR_1g115325 44.554 202 105 5 9 208 11 207 6.88e-50 167
MS.gene57390.t1 MTR_7g100020 51.235 162 75 4 9 168 11 170 1.82e-49 166
MS.gene57390.t1 MTR_2g096550 48.795 166 82 3 5 168 7 171 8.17e-49 164
MS.gene57390.t1 MTR_6g021790 49.405 168 82 3 10 176 3 168 8.94e-49 164
MS.gene57390.t1 MTR_8g031660 43.147 197 105 4 12 203 5 199 3.65e-48 162
MS.gene57390.t1 MTR_8g031870 46.067 178 89 4 12 188 5 176 8.01e-48 160
MS.gene57390.t1 MTR_6g079550 48.851 174 86 3 8 180 7 178 2.29e-47 160
MS.gene57390.t1 MTR_2g027660 50.000 160 77 3 10 168 3 160 4.80e-47 159
MS.gene57390.t1 MTR_7g051940 46.305 203 85 6 12 194 12 210 5.40e-46 157
MS.gene57390.t1 MTR_2g005510 41.327 196 109 4 6 197 8 201 2.32e-45 155
MS.gene57390.t1 MTR_2g083860 47.619 168 85 3 9 175 9 174 2.91e-45 155
MS.gene57390.t1 MTR_2g014990 42.132 197 100 4 1 185 1 195 1.47e-44 153
MS.gene57390.t1 MTR_4g063160 48.780 164 78 5 9 168 11 172 1.49e-44 153
MS.gene57390.t1 MTR_3g086980 39.234 209 112 5 6 210 9 206 1.51e-44 153
MS.gene57390.t1 MTR_4g064897 42.604 169 94 3 8 175 7 173 2.47e-44 152
MS.gene57390.t1 MTR_8g031680 48.101 158 79 3 12 168 5 160 2.48e-44 152
MS.gene57390.t1 MTR_4g088090 41.624 197 101 4 1 185 1 195 3.34e-44 152
MS.gene57390.t1 MTR_2g090865 44.712 208 103 6 8 206 6 210 7.70e-44 151
MS.gene57390.t1 MTR_8g027220 45.509 167 88 3 7 172 20 184 1.37e-43 151
MS.gene57390.t1 MTR_2g075950 44.643 168 90 3 9 175 9 174 1.50e-43 150
MS.gene57390.t1 MTR_4g079350 42.132 197 100 4 1 185 1 195 1.93e-43 150
MS.gene57390.t1 MTR_3g069510 40.984 183 102 4 8 186 7 187 2.69e-43 149
MS.gene57390.t1 MTR_8g089985 38.500 200 111 4 7 205 11 199 5.85e-43 149
MS.gene57390.t1 MTR_1g078200 43.716 183 100 3 11 192 12 192 7.41e-43 149
MS.gene57390.t1 MTR_8g031830 46.795 156 80 3 12 166 5 158 5.86e-42 145
MS.gene57390.t1 MTR_1g068730 47.059 153 77 4 6 156 8 158 9.47e-42 144
MS.gene57390.t1 MTR_1g068740 47.059 153 75 5 7 156 9 158 1.45e-41 144
MS.gene57390.t1 MTR_8g036220 44.262 183 99 3 11 192 14 194 1.19e-40 143
MS.gene57390.t1 MTR_8g107070 44.828 174 93 3 8 180 9 180 1.74e-40 144
MS.gene57390.t1 MTR_4g099470 51.449 138 65 2 38 175 10 145 1.97e-40 141
MS.gene57390.t1 MTR_7g405790 44.118 170 92 3 12 180 14 181 4.07e-40 141
MS.gene57390.t1 MTR_1g052475 37.681 207 117 5 7 203 9 213 1.21e-39 140
MS.gene57390.t1 MTR_0262s0050 41.667 168 95 3 9 175 11 176 1.66e-39 140
MS.gene57390.t1 MTR_7g117910 45.946 148 77 3 8 154 15 160 3.92e-37 133
MS.gene57390.t1 MTR_1g094220 42.012 169 93 5 15 181 33 198 1.28e-35 129
MS.gene57390.t1 MTR_1g094220 41.875 160 89 4 15 172 33 190 7.02e-35 127
MS.gene57390.t1 MTR_4g098950 42.138 159 89 3 14 171 10 166 1.87e-34 126
MS.gene57390.t1 MTR_5g076590 42.593 162 90 3 15 175 12 171 2.29e-34 125
MS.gene57390.t1 MTR_5g013900 41.509 159 90 3 14 171 10 166 1.29e-33 124
MS.gene57390.t1 MTR_8g090215 40.881 159 91 3 14 171 10 166 1.79e-33 124
MS.gene57390.t1 MTR_1g094220 42.038 157 87 4 15 169 33 187 2.43e-33 123
MS.gene57390.t1 MTR_3g087160 41.509 159 90 3 14 171 10 166 2.70e-33 123
MS.gene57390.t1 MTR_8g103550 39.506 162 95 3 15 175 11 170 4.53e-33 122
MS.gene57390.t1 MTR_1g094220 42.038 157 87 4 15 169 33 187 7.61e-33 123
MS.gene57390.t1 MTR_3g064390 40.123 162 94 3 15 175 12 171 1.51e-32 121
MS.gene57390.t1 MTR_2g102060 40.506 158 91 3 15 171 12 167 2.52e-32 120
MS.gene57390.t1 MTR_4g069850 36.416 173 102 5 13 178 8 179 1.09e-28 111
MS.gene57390.t1 MTR_2g101890 38.012 171 98 5 13 176 10 179 2.94e-28 110
MS.gene57390.t1 MTR_4g012940 36.842 171 100 5 13 176 8 177 3.16e-27 107
MS.gene57390.t1 MTR_2g005500 35.149 202 86 5 8 206 4 163 1.62e-26 103
MS.gene57390.t1 MTR_8g092020 38.636 176 97 7 1 168 1 173 7.24e-26 103
MS.gene57390.t1 MTR_1g097420 37.423 163 94 5 13 168 8 169 2.07e-25 102
MS.gene57390.t1 MTR_3g064390 41.600 125 70 3 15 138 12 134 6.93e-24 96.7
MS.gene57390.t1 MTR_3g107707 34.637 179 110 5 5 181 4 177 7.39e-24 98.6
MS.gene57390.t1 MTR_3g107717 34.637 179 110 5 5 181 4 177 8.96e-24 98.2
MS.gene57390.t1 MTR_3g107713 34.637 179 110 5 5 181 4 177 1.03e-23 98.2
MS.gene57390.t1 MTR_3g078260 30.412 194 120 5 13 194 8 198 1.08e-23 97.8
MS.gene57390.t1 MTR_6g087980 32.402 179 106 5 13 179 6 181 1.49e-23 97.4
MS.gene57390.t1 MTR_2g090875 31.818 176 105 5 13 176 6 178 3.08e-23 96.3
MS.gene57390.t1 MTR_4g073250 30.526 190 117 5 13 190 6 192 4.78e-23 95.5
MS.gene57390.t1 MTR_4g088055 30.814 172 104 5 13 172 6 174 1.20e-21 91.7
MS.gene57390.t1 MTR_8g075240 31.250 176 106 5 13 176 6 178 6.73e-21 89.7
MS.gene57390.t1 MTR_1g097420 35.152 165 97 6 11 168 35 196 1.13e-20 90.1
MS.gene57390.t1 MTR_5g022600 30.682 176 107 5 13 176 6 178 3.01e-20 87.8
MS.gene57390.t1 MTR_6g039490 35.802 162 98 4 13 168 8 169 7.26e-20 87.8
MS.gene57390.t1 MTR_8g031810 43.617 94 38 2 12 104 5 84 2.36e-17 77.0
MS.gene57390.t1 MTR_4g113620 30.682 176 108 5 7 181 6 168 8.63e-17 78.6
MS.gene57390.t1 MTR_3g078260 32.773 119 76 3 15 132 10 125 1.25e-15 73.9
MS.gene57390.t1 MTR_1452s0010 45.588 68 36 1 43 110 12 78 5.49e-13 65.1
MS.gene57390.t1 MTR_8g091980 30.675 163 83 6 15 149 23 183 3.68e-11 64.3
MS.gene57390.t1 MTR_8g091980 30.675 163 83 6 15 149 23 183 3.91e-11 63.5
MS.gene57390.t1 MTR_5g078090 30.058 173 100 9 10 172 16 177 7.65e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57390.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.18e-125 360
MS.gene57390.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.18e-125 360
MS.gene57390.t1 AT1G43890 86.364 198 27 0 1 198 1 198 1.18e-125 360
MS.gene57390.t1 AT5G03530 68.137 204 65 0 1 204 1 204 1.46e-105 309
MS.gene57390.t1 AT5G03530 68.137 204 65 0 1 204 1 204 1.46e-105 309
MS.gene57390.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.32e-89 266
MS.gene57390.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.32e-89 266
MS.gene57390.t1 AT3G09910 67.539 191 62 0 1 191 1 191 9.32e-89 266
MS.gene57390.t1 AT3G09910 66.845 187 59 1 1 184 1 187 3.49e-82 249
MS.gene57390.t1 AT3G09910 66.845 187 59 1 1 184 1 187 3.49e-82 249
MS.gene57390.t1 AT4G17530 54.167 168 74 3 9 175 4 169 1.21e-54 179
MS.gene57390.t1 AT5G47200 54.167 168 74 3 9 175 4 169 2.00e-54 178
MS.gene57390.t1 AT1G02130 56.522 161 67 3 9 168 4 162 2.97e-54 177
MS.gene57390.t1 AT3G11730 55.556 162 69 3 8 168 3 162 1.86e-53 176
MS.gene57390.t1 AT4G35860 50.595 168 80 3 10 176 3 168 4.45e-52 172
MS.gene57390.t1 AT5G59840 51.852 162 74 4 9 168 11 170 1.02e-50 169
MS.gene57390.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.96e-50 168
MS.gene57390.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.96e-50 168
MS.gene57390.t1 AT3G53610 51.852 162 74 4 9 168 11 170 2.96e-50 168
MS.gene57390.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.06e-49 166
MS.gene57390.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.06e-49 166
MS.gene57390.t1 AT3G46060 51.235 162 75 4 9 168 11 170 1.06e-49 166
MS.gene57390.t1 AT4G17160 49.701 167 81 3 10 175 3 167 3.62e-49 164
MS.gene57390.t1 AT3G09900 52.121 165 75 4 6 168 8 170 8.19e-49 164
MS.gene57390.t1 AT5G03520 51.515 165 76 4 6 168 8 170 1.18e-48 164
MS.gene57390.t1 AT4G17170 50.000 160 77 3 10 168 3 160 1.14e-47 161
MS.gene57390.t1 AT1G05810 46.369 179 93 3 3 180 2 178 1.29e-46 158
MS.gene57390.t1 AT3G07410 47.953 171 86 3 11 180 10 178 1.60e-46 158
MS.gene57390.t1 AT1G05810 47.368 171 87 3 11 180 56 224 3.87e-46 159
MS.gene57390.t1 AT2G33870 45.455 176 93 3 1 175 1 174 5.10e-46 157
MS.gene57390.t1 AT4G39990 44.134 179 94 4 11 185 15 191 1.67e-45 155
MS.gene57390.t1 AT1G09630 42.132 197 102 4 8 203 7 192 1.90e-45 155
MS.gene57390.t1 AT1G18200 47.159 176 90 3 1 175 1 174 6.54e-45 154
MS.gene57390.t1 AT2G43130 45.614 171 90 3 11 180 10 178 1.36e-44 153
MS.gene57390.t1 AT1G28550 45.455 176 93 3 1 175 1 174 2.21e-44 152
MS.gene57390.t1 AT1G73640 46.023 176 92 3 1 175 1 174 2.74e-44 153
MS.gene57390.t1 AT1G06400 44.886 176 94 3 1 175 1 174 2.81e-44 152
MS.gene57390.t1 AT1G16920 45.294 170 90 3 7 175 7 174 3.44e-44 152
MS.gene57390.t1 AT5G60860 42.132 197 100 4 1 185 1 195 6.02e-44 151
MS.gene57390.t1 AT3G46830 43.787 169 92 3 8 175 7 173 1.24e-43 150
MS.gene57390.t1 AT3G46830 43.787 169 92 3 8 175 7 173 1.24e-43 150
MS.gene57390.t1 AT1G07410 40.541 185 104 4 8 188 7 189 1.39e-43 150
MS.gene57390.t1 AT5G45750 45.833 168 88 3 9 175 9 174 1.46e-43 150
MS.gene57390.t1 AT5G47520 45.614 171 90 3 11 180 12 180 1.48e-43 150
MS.gene57390.t1 AT2G31680 41.429 210 112 4 11 211 10 217 1.71e-43 150
MS.gene57390.t1 AT4G18430 44.318 176 95 3 1 175 1 174 2.87e-43 150
MS.gene57390.t1 AT5G59150 42.353 170 95 3 7 175 6 173 5.04e-43 149
MS.gene57390.t1 AT3G15060 42.541 181 101 3 1 180 1 179 3.26e-42 147
MS.gene57390.t1 AT5G65270 40.936 171 98 3 8 177 12 180 4.21e-42 147
MS.gene57390.t1 AT4G18800 43.931 173 94 3 9 180 9 179 1.22e-41 145
MS.gene57390.t1 AT3G12160 40.110 182 103 4 7 184 9 188 3.31e-40 142
MS.gene57390.t1 AT1G01200 42.690 171 94 4 8 176 23 191 2.17e-39 140
MS.gene57390.t1 AT5G47960 36.323 223 127 5 4 225 6 214 5.26e-39 139
MS.gene57390.t1 AT4G39890 41.530 183 103 3 14 193 10 191 1.04e-38 137
MS.gene57390.t1 AT4G35860 50.407 123 59 2 54 176 2 122 7.31e-36 129
MS.gene57390.t1 AT5G10260 42.138 159 89 3 14 171 10 166 6.40e-35 127
MS.gene57390.t1 AT3G54840 42.767 159 87 4 15 171 35 191 8.68e-35 127
MS.gene57390.t1 AT5G03520 49.612 129 62 3 41 168 34 160 2.00e-34 126
MS.gene57390.t1 AT3G54840 42.405 158 87 4 16 171 2 157 2.04e-34 125
MS.gene57390.t1 AT2G22290 42.767 159 88 3 14 171 10 166 7.36e-34 125
MS.gene57390.t1 AT3G54840 42.675 157 86 4 15 169 35 189 1.61e-33 123
MS.gene57390.t1 AT4G19640 40.123 162 94 3 15 175 12 171 9.67e-33 121
MS.gene57390.t1 AT2G44610 40.881 159 91 3 14 171 10 166 1.09e-32 122
MS.gene57390.t1 AT5G45130 37.931 174 103 4 3 175 2 171 1.11e-31 119
MS.gene57390.t1 AT5G64990 41.026 156 89 3 14 168 8 161 1.56e-30 116
MS.gene57390.t1 AT5G45130 39.103 156 92 3 17 171 22 175 2.15e-29 113
MS.gene57390.t1 AT3G18820 38.415 164 93 5 13 169 8 170 3.86e-28 109
MS.gene57390.t1 AT1G22740 39.264 163 91 5 13 168 8 169 6.25e-28 108
MS.gene57390.t1 AT5G64990 39.264 163 89 4 14 168 8 168 7.69e-28 108
MS.gene57390.t1 AT1G52280 35.204 196 101 6 13 201 8 184 8.46e-28 108
MS.gene57390.t1 AT3G16100 38.596 171 97 5 13 176 8 177 1.55e-27 108
MS.gene57390.t1 AT5G39620 36.181 199 117 6 14 203 6 203 2.23e-27 107
MS.gene57390.t1 AT1G49300 37.423 163 94 5 13 168 8 169 1.09e-26 105
MS.gene57390.t1 AT1G49300 37.423 163 94 5 13 168 8 169 1.09e-26 105
MS.gene57390.t1 AT4G09720 39.264 163 91 5 13 168 8 169 1.18e-26 105
MS.gene57390.t1 AT2G21880 38.415 164 91 6 13 168 9 170 3.21e-26 104
MS.gene57390.t1 AT4G09720 38.690 168 90 6 13 168 8 174 6.35e-26 103
MS.gene57390.t1 AT5G59150 39.837 123 72 2 53 175 2 122 1.10e-25 102
MS.gene57390.t1 AT2G44690 33.333 180 105 5 13 180 18 194 1.69e-25 102
MS.gene57390.t1 AT4G09720 36.782 174 91 6 13 168 8 180 5.83e-25 101
MS.gene57390.t1 AT4G19640 40.625 128 73 3 15 141 12 137 1.88e-23 95.5
MS.gene57390.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.63e-23 95.9
MS.gene57390.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.63e-23 95.9
MS.gene57390.t1 AT4G35020 31.285 179 108 5 13 179 6 181 3.63e-23 95.9
MS.gene57390.t1 AT4G19640 39.850 133 77 3 15 146 12 142 4.16e-23 95.9
MS.gene57390.t1 AT5G55080 33.908 174 106 7 5 175 4 171 5.54e-23 96.3
MS.gene57390.t1 AT4G28950 31.073 177 109 5 13 179 6 179 1.19e-22 95.1
MS.gene57390.t1 AT5G20010 33.690 187 109 6 5 181 4 185 1.21e-22 95.1
MS.gene57390.t1 AT5G55190 34.682 173 106 5 5 175 4 171 1.49e-22 95.1
MS.gene57390.t1 AT3G51300 32.184 174 103 5 15 176 8 178 1.63e-22 94.4
MS.gene57390.t1 AT3G48040 32.044 181 107 6 13 181 8 184 2.56e-22 94.0
MS.gene57390.t1 AT5G20020 34.682 173 106 5 5 175 4 171 3.34e-22 94.0
MS.gene57390.t1 AT1G20090 30.682 176 107 5 13 176 5 177 7.77e-22 92.4
MS.gene57390.t1 AT2G17800 31.818 176 105 5 13 176 6 178 8.39e-22 92.4
MS.gene57390.t1 AT2G17800 31.818 176 105 5 13 176 6 178 8.39e-22 92.4
MS.gene57390.t1 AT1G75840 30.682 176 107 5 13 176 6 178 1.00e-21 92.0
MS.gene57390.t1 AT4G35950 31.250 176 106 5 13 176 6 178 5.21e-21 90.1
MS.gene57390.t1 AT5G62880 30.682 176 107 5 13 176 8 180 1.72e-20 89.4
MS.gene57390.t1 AT3G48040 32.353 170 99 6 15 171 10 176 3.00e-20 87.4
MS.gene57390.t1 AT4G09720 40.458 131 71 4 44 168 6 135 4.95e-20 86.7
MS.gene57390.t1 AT4G09720 40.458 131 71 4 44 168 6 135 4.95e-20 86.7
MS.gene57390.t1 AT4G09720 40.458 131 71 4 44 168 6 135 4.95e-20 86.7
MS.gene57390.t1 AT5G45970 29.070 172 107 5 13 172 6 174 6.16e-20 87.4
MS.gene57390.t1 AT2G21880 39.394 132 71 5 44 168 16 145 4.81e-19 84.3
MS.gene57390.t1 AT2G21880 39.394 132 71 5 44 168 16 145 4.81e-19 84.3
MS.gene57390.t1 AT5G62880 31.737 167 95 6 15 169 10 169 2.14e-18 82.8
MS.gene57390.t1 AT2G21880 33.537 164 91 7 13 168 9 162 2.57e-17 80.1
MS.gene57390.t1 AT4G35020 33.621 116 73 3 15 129 8 120 2.29e-15 73.2
MS.gene57390.t1 AT4G35020 33.621 116 73 3 15 129 8 120 2.29e-15 73.2
MS.gene57390.t1 AT3G51290 28.342 187 113 6 7 176 597 779 8.06e-15 76.3
MS.gene57390.t1 AT5G46025 36.538 104 65 1 74 177 6 108 1.24e-14 70.1
MS.gene57390.t1 AT3G49870 32.934 167 95 9 14 172 1 158 7.82e-12 63.5
MS.gene57390.t1 AT3G49870 32.749 171 98 9 10 172 16 177 1.23e-11 63.5
MS.gene57390.t1 AT5G67560 32.749 171 98 9 10 172 16 177 1.72e-11 63.2
MS.gene57390.t1 AT3G49860 30.818 159 93 8 14 163 12 162 4.65e-11 61.6
MS.gene57390.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.82e-11 63.5
MS.gene57390.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.82e-11 63.5
MS.gene57390.t1 AT5G64813 30.061 163 84 7 15 149 24 184 5.82e-11 63.5

Find 69 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACAAATCTCTCTGAAATA+TGG 0.215859 4.2:-9054467 MS.gene57390:CDS
TAGCACTGCATTCAATAAAT+AGG 0.259648 4.2:+9053298 None:intergenic
CAGAAAATGGATTCGAGTTC+AGG 0.266933 4.2:-9056110 None:intergenic
ATAGACTTTGCTAGGGAATA+TGG 0.277032 4.2:-9053324 MS.gene57390:CDS
AAGCTTGCCATTTGGGATAC+TGG 0.289194 4.2:-9055830 MS.gene57390:intron
TTGTTAATGATTGGGGATTC+TGG 0.299697 4.2:-9056059 MS.gene57390:CDS
TCTCTTTCAGAACGAGTTAC+TGG 0.303046 4.2:+9051476 None:intergenic
CCTTAGAGCCCTCGGCTAAA+AGG 0.308198 4.2:+9052937 None:intergenic
AAAGCTTAAGCTTGCCATTT+GGG 0.317285 4.2:-9055837 MS.gene57390:CDS
CTCTGTCACCAATTTCATAT+AGG 0.329797 4.2:+9050107 None:intergenic
TGTTCAAATTGTTAATGATT+GGG 0.336729 4.2:-9056067 MS.gene57390:CDS
GGAGAAAGGTAGAGAGTTGC+AGG 0.344873 4.2:-9051405 MS.gene57390:CDS
ATGTTCAAATTGTTAATGAT+TGG 0.346507 4.2:-9056068 MS.gene57390:CDS
GCACTAGCCCTATATGAAAT+TGG 0.346710 4.2:-9050115 MS.gene57390:CDS
AGTCTTGATTTGTTGAATAA+AGG 0.348413 4.2:+9054430 None:intergenic
ACCAAATAATGCAGCTGGTC+AGG 0.352646 4.2:-9055447 MS.gene57390:intron
GAAGAGTTGCAATTGTAAAC+TGG 0.356751 4.2:+9049874 None:intergenic
CAGGCTCTTGGTGACTTCAA+TGG 0.375521 4.2:-9051386 MS.gene57390:CDS
AGCATGCTTATCTGCATATA+AGG 0.380222 4.2:+9049914 None:intergenic
TCTGTCACCAATTTCATATA+GGG 0.381685 4.2:+9050108 None:intergenic
AAAAGCTTAAGCTTGCCATT+TGG 0.383397 4.2:-9055838 MS.gene57390:CDS
TTCTCGTGGTGTTGAGTTGT+TGG 0.401266 4.2:-9051426 MS.gene57390:CDS
TACAAATCTCTCTGAAATAT+GGG 0.405801 4.2:-9054466 MS.gene57390:CDS
GACGTTTCAATATCACTAAA+GGG 0.407097 4.2:-9050061 MS.gene57390:CDS
GATGATCTCTCTCCCACCAT+TGG 0.416793 4.2:-9055990 MS.gene57390:intron
GACTGCATGAAGATGCTTGT+TGG 0.424153 4.2:-9054411 MS.gene57390:CDS
AAGAGGGAATAGACTTTGCT+AGG 0.457004 4.2:-9053332 MS.gene57390:CDS
GTTCAAATTGTTAATGATTG+GGG 0.472425 4.2:-9056066 MS.gene57390:CDS
AGACGTTTCAATATCACTAA+AGG 0.477307 4.2:-9050062 MS.gene57390:CDS
GGTCAAATATGTCACGATAG+AGG 0.481991 4.2:-9055864 MS.gene57390:CDS
GGTAGAGAGTTGCAGGCTCT+TGG 0.490159 4.2:-9051398 MS.gene57390:CDS
AGAAGAAGCAATAGCAGAGA+TGG 0.490588 4.2:-9050086 MS.gene57390:CDS
ATGATTGGGGATTCTGGTGT+TGG 0.503280 4.2:-9056053 MS.gene57390:CDS
CTCTTTCAGAACGAGTTACT+GGG 0.504101 4.2:+9051477 None:intergenic
GGTGTTGAGTTGTTGGAGAA+AGG 0.504251 4.2:-9051419 MS.gene57390:CDS
ATATCACTAAAGGGGTATCC+AGG 0.504295 4.2:-9050052 MS.gene57390:intron
AGAAAATGGATTCGAGTTCA+GGG 0.507840 4.2:-9056109 None:intergenic
TAGAGTTGTGACAAAGAAAG+AGG 0.518206 4.2:-9053349 MS.gene57390:CDS
GTCAAATATGTCACGATAGA+GGG 0.528925 4.2:-9055863 MS.gene57390:CDS
TGTTGGAAACAAAGTAGATA+AGG 0.532932 4.2:-9054394 MS.gene57390:intron
AGAGTTGTGACAAAGAAAGA+GGG 0.538991 4.2:-9053348 MS.gene57390:CDS
TATGAAAGATCTGTAAAATG+AGG 0.541188 4.2:+9049846 None:intergenic
TGCAGAGAACTAATCAAACT+TGG 0.543993 4.2:+9049798 None:intergenic
TTGCATACTCAGAGAATGCT+AGG 0.548823 4.2:+9050149 None:intergenic
TCTTACTACAGAGGGGCTCA+AGG 0.553803 4.2:-9055401 MS.gene57390:CDS
TAGCATTCTCTGAGTATGCA+AGG 0.556080 4.2:-9050147 MS.gene57390:CDS
TGACAAGTTCTTACTACAGA+GGG 0.566870 4.2:-9055409 MS.gene57390:CDS
GAAAGGAAACGAACCAATGG+TGG 0.568646 4.2:+9055977 None:intergenic
TTCTCTGAGTATGCAAGGGT+AGG 0.568807 4.2:-9050142 MS.gene57390:CDS
ATACATACCAGTATCCCAAA+TGG 0.569683 4.2:+9055823 None:intergenic
TCTCTCTGAAATATGGGCAA+AGG 0.571068 4.2:-9054460 MS.gene57390:CDS
GAGCCCTCGGCTAAAAGGCT+AGG 0.572458 4.2:+9052942 None:intergenic
AGGGGCTCAAGGAATCATCA+TGG 0.573145 4.2:-9055390 MS.gene57390:CDS
AGAGGGAATAGACTTTGCTA+GGG 0.577586 4.2:-9053331 MS.gene57390:CDS
GCTTCAGCAACAACCGCTGG+TGG 0.578132 4.2:+9052869 None:intergenic
TCTCTGAGTATGCAAGGGTA+GGG 0.583375 4.2:-9050141 MS.gene57390:CDS
GGGGCTCAAGGAATCATCAT+GGG 0.609277 4.2:-9055389 MS.gene57390:intron
AGAGAACTAATCAAACTTGG+AGG 0.614896 4.2:+9049801 None:intergenic
ATCTCACAAAGAGTTTCTCG+TGG 0.622042 4.2:-9051440 MS.gene57390:CDS
GAGATCATCAAAATCATCTG+AGG 0.628890 4.2:+9056004 None:intergenic
ATGTTAGAGACACAAAGCAC+TGG 0.634191 4.2:-9049824 MS.gene57390:CDS
AGCATTCTCTGAGTATGCAA+GGG 0.637209 4.2:-9050146 MS.gene57390:CDS
CAGTCTGATGCATCCACCAG+CGG 0.644893 4.2:-9052882 MS.gene57390:intron
AAAGGAAACGAACCAATGGT+GGG 0.650141 4.2:+9055978 None:intergenic
ACGTTTCAATATCACTAAAG+GGG 0.663806 4.2:-9050060 MS.gene57390:CDS
CTGGTGGATGCATCAGACTG+AGG 0.668797 4.2:+9052885 None:intergenic
CTGACAAGTTCTTACTACAG+AGG 0.693244 4.2:-9055410 MS.gene57390:CDS
ATGCAGTTTATGACGTAACA+CGG 0.694182 4.2:-9054500 MS.gene57390:intron
GACAAGTTCTTACTACAGAG+GGG 0.732850 4.2:-9055408 MS.gene57390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATTTTTTTGAG+AGG - chr4.2:9053829-9053848 MS.gene57390:intron 10.0%
!!! TTTTTGAAGTAAAATAAATA+AGG + chr4.2:9053888-9053907 None:intergenic 10.0%
!!! TTTTTTTAATTTTTTTGAGA+GGG - chr4.2:9053830-9053849 MS.gene57390:intron 10.0%
!! AAAAAATTGAATATCATTAG+AGG - chr4.2:9052109-9052128 MS.gene57390:intron 15.0%
!! AAATAAGAACAAAAGAAAAA+TGG + chr4.2:9053574-9053593 None:intergenic 15.0%
!! AGATAGAATTAAATCAATTA+AGG + chr4.2:9049932-9049951 None:intergenic 15.0%
!! ATAATAAGATTTGAACATAT+TGG - chr4.2:9053350-9053369 MS.gene57390:CDS 15.0%
!! ATTTGACATAAAATTCTTAA+AGG + chr4.2:9051516-9051535 None:intergenic 15.0%
!! TAATAATCAATATCATCATT+GGG + chr4.2:9050852-9050871 None:intergenic 15.0%
!! TGTAAAATGTGAATTAATTT+AGG + chr4.2:9050785-9050804 None:intergenic 15.0%
!!! AAATTTATCCATGTATTTTT+TGG - chr4.2:9051594-9051613 MS.gene57390:intron 15.0%
!!! AGTAAAAAAGAACATTTTTA+AGG - chr4.2:9052967-9052986 MS.gene57390:intron 15.0%
!!! ATCTAAAATCTAAATTGATA+TGG + chr4.2:9054842-9054861 None:intergenic 15.0%
!!! TATTCAAATCATGTATTTTT+TGG - chr4.2:9051045-9051064 MS.gene57390:intron 15.0%
!!! TTATTTTGTAATCTTGTTAT+TGG - chr4.2:9050170-9050189 MS.gene57390:CDS 15.0%
!! AAAATACATGATTTGAATAC+TGG + chr4.2:9051044-9051063 None:intergenic 20.0%
!! AAGTAGAATATCAATCAAAT+AGG + chr4.2:9050404-9050423 None:intergenic 20.0%
!! ACAAACTAAATATTAGAAAC+AGG + chr4.2:9053450-9053469 None:intergenic 20.0%
!! ACAGTAAATAAATGTACTAT+TGG + chr4.2:9050554-9050573 None:intergenic 20.0%
!! ACCAAATATTTCTTTATATG+AGG - chr4.2:9053779-9053798 MS.gene57390:intron 20.0%
!! AGTAGAATATCAATCAAATA+GGG + chr4.2:9050403-9050422 None:intergenic 20.0%
!! ATGTTCAAATTGTTAATGAT+TGG - chr4.2:9049812-9049831 MS.gene57390:CDS 20.0%
!! CTAATAATCAATATCATCAT+TGG + chr4.2:9050853-9050872 None:intergenic 20.0%
!! TAAATAAAACTCCAATCTAA+TGG + chr4.2:9050153-9050172 None:intergenic 20.0%
!! TAAATCAATTAAGGAATGAA+AGG + chr4.2:9049923-9049942 None:intergenic 20.0%
!! TAAATTAAATACCACATGAA+AGG + chr4.2:9052280-9052299 None:intergenic 20.0%
!! TAATTATTGGTAAAAGTTGA+TGG + chr4.2:9050213-9050232 None:intergenic 20.0%
!! TACCAATAATTAATCTTTAG+CGG - chr4.2:9050221-9050240 MS.gene57390:intron 20.0%
!! TATGAACATAAACTTATTGA+TGG + chr4.2:9055665-9055684 None:intergenic 20.0%
!! TGTTCAAATTGTTAATGATT+GGG - chr4.2:9049813-9049832 MS.gene57390:CDS 20.0%
!!! AAAGCATTGAATATTTGATA+AGG - chr4.2:9054112-9054131 MS.gene57390:intron 20.0%
!!! AATTATTTGTTTTCTGAGTA+GGG - chr4.2:9050700-9050719 MS.gene57390:intron 20.0%
!!! AGCAAATATTCATTTACTTT+TGG + chr4.2:9055158-9055177 None:intergenic 20.0%
!!! ATTTAATTTGTGATGAACAA+TGG - chr4.2:9052861-9052880 MS.gene57390:intron 20.0%
!!! GATATTGGTTTTTAGATTAA+AGG - chr4.2:9050330-9050349 MS.gene57390:intron 20.0%
!!! GCAAATATTCATTTACTTTT+GGG + chr4.2:9055157-9055176 None:intergenic 20.0%
!!! TGTAAGAGTGTATTATTTTT+TGG - chr4.2:9055410-9055429 MS.gene57390:CDS 20.0%
! AAAAGAAAAATGGAATGTAC+AGG + chr4.2:9053564-9053583 None:intergenic 25.0%
! AAAAGAATTCTGAATTCTGA+TGG + chr4.2:9054243-9054262 None:intergenic 25.0%
! AACAAAATATAGAGGTAATC+AGG + chr4.2:9051350-9051369 None:intergenic 25.0%
! AATGGACAAGGATTTAAAAA+TGG + chr4.2:9050135-9050154 None:intergenic 25.0%
! ACAAGACATGATATATGAAT+TGG - chr4.2:9054654-9054673 MS.gene57390:intron 25.0%
! ACCAATAATTAATCTTTAGC+GGG - chr4.2:9050222-9050241 MS.gene57390:intron 25.0%
! ATAATGTCAGCTCAAAATTA+AGG + chr4.2:9053805-9053824 None:intergenic 25.0%
! ATATATTCAGTGGATAGAAT+AGG - chr4.2:9050608-9050627 MS.gene57390:intron 25.0%
! ATATCAATCAAATAGGGTAT+TGG + chr4.2:9050397-9050416 None:intergenic 25.0%
! ATGTAGATGTAATATAGTGA+CGG - chr4.2:9053191-9053210 MS.gene57390:intron 25.0%
! ATGTCAAATCCTATAATGTA+AGG + chr4.2:9052468-9052487 None:intergenic 25.0%
! ATGTTAGAAATCCATGAAAA+TGG + chr4.2:9053095-9053114 None:intergenic 25.0%
! GCCTCATATAAAGAAATATT+TGG + chr4.2:9053783-9053802 None:intergenic 25.0%
! GTTCAAATTGTTAATGATTG+GGG - chr4.2:9049814-9049833 MS.gene57390:CDS 25.0%
! GTTTATCTTCAATTTGGTAA+TGG - chr4.2:9054572-9054591 MS.gene57390:intron 25.0%
! TAAAGGCCAATTGTATATAT+GGG - chr4.2:9050347-9050366 MS.gene57390:intron 25.0%
! TAATAATCTGTAGGATTCAA+TGG - chr4.2:9051176-9051195 MS.gene57390:intron 25.0%
! TAGGTAAATATTTAACCATG+AGG + chr4.2:9050766-9050785 None:intergenic 25.0%
! TATGAAAGATCTGTAAAATG+AGG + chr4.2:9056037-9056056 None:intergenic 25.0%
! TATTGGGAAGACAATTTAAA+AGG + chr4.2:9050380-9050399 None:intergenic 25.0%
! TCAAACATTAATTTAGCAGT+AGG + chr4.2:9055214-9055233 None:intergenic 25.0%
! TCTTTCATCTAATAATCTGT+AGG - chr4.2:9051167-9051186 MS.gene57390:intron 25.0%
! TGATATCATTCATATTGCTT+GGG - chr4.2:9051096-9051115 MS.gene57390:intron 25.0%
! TTAAAGGCCAATTGTATATA+TGG - chr4.2:9050346-9050365 MS.gene57390:intron 25.0%
! TTCCTAAAAGTTATCATTTC+CGG + chr4.2:9052085-9052104 None:intergenic 25.0%
! TTCTATTAAAAATGGGTGTT+TGG + chr4.2:9055131-9055150 None:intergenic 25.0%
! TTGATATCATTCATATTGCT+TGG - chr4.2:9051095-9051114 MS.gene57390:intron 25.0%
! TTGCTTGTTTATCTTCAATT+TGG - chr4.2:9054566-9054585 MS.gene57390:intron 25.0%
! TTTACTGAGCAATCAATTAA+GGG - chr4.2:9054881-9054900 MS.gene57390:intron 25.0%
!! AATGACATAGATTTTGAACA+AGG + chr4.2:9051624-9051643 None:intergenic 25.0%
!! ATTCAATCGTTAGCAAATTT+TGG - chr4.2:9051683-9051702 MS.gene57390:intron 25.0%
!! CTTTAAACATCAAGTAGTTT+TGG + chr4.2:9050732-9050751 None:intergenic 25.0%
!! GAATAGGTTCATTTTGTATT+TGG - chr4.2:9055594-9055613 MS.gene57390:intron 25.0%
!! TACAAATATTGCAGTCATTT+TGG + chr4.2:9051240-9051259 None:intergenic 25.0%
!! TATAATTAAACCGACTTTAG+AGG - chr4.2:9055456-9055475 MS.gene57390:intron 25.0%
!! TATCAATCAAATAGGGTATT+GGG + chr4.2:9050396-9050415 None:intergenic 25.0%
!! TCTTTTACATATGTAGAAGT+TGG - chr4.2:9051971-9051990 MS.gene57390:intron 25.0%
!! TTTAGATTTTAGATTGCCAT+TGG - chr4.2:9054848-9054867 MS.gene57390:intron 25.0%
!! TTTTTCTTGCCTTACATTAT+AGG - chr4.2:9052456-9052475 MS.gene57390:intron 25.0%
!!! AGTCTTGATTTGTTGAATAA+AGG + chr4.2:9051453-9051472 None:intergenic 25.0%
!!! CTGATTTACTAACCTTATTT+TGG - chr4.2:9052673-9052692 MS.gene57390:intron 25.0%
!!! GAATTATTTGTTTTCTGAGT+AGG - chr4.2:9050699-9050718 MS.gene57390:intron 25.0%
!!! TACAAATCTCTCTGAAATAT+GGG - chr4.2:9051414-9051433 MS.gene57390:CDS 25.0%
!!! TCAATTTGGTAATGGATTAT+TGG - chr4.2:9054580-9054599 MS.gene57390:intron 25.0%
!!! TTACAAATCTCTCTGAAATA+TGG - chr4.2:9051413-9051432 MS.gene57390:CDS 25.0%
!!! TTGTTTTTCTAGTTTGCATT+TGG - chr4.2:9051923-9051942 MS.gene57390:intron 25.0%
!!! TTTTGTAATCTTGTTATTGG+TGG - chr4.2:9050173-9050192 MS.gene57390:intron 25.0%
AAAGGCCAATTGTATATATG+GGG - chr4.2:9050348-9050367 MS.gene57390:intron 30.0%
AACAGAGTTGAAGAATAAGA+GGG + chr4.2:9055250-9055269 None:intergenic 30.0%
AAGAATTGAGAGGCAAAAAA+GGG + chr4.2:9050531-9050550 None:intergenic 30.0%
AATGAAAAGGAAACTAGAGA+GGG + chr4.2:9054333-9054352 None:intergenic 30.0%
ACGTTTCAATATCACTAAAG+GGG - chr4.2:9055820-9055839 MS.gene57390:intron 30.0%
ACTAGCAGTAAAACTTAACT+AGG + chr4.2:9055183-9055202 None:intergenic 30.0%
ACTGACATGATTTGAATACA+AGG + chr4.2:9051556-9051575 None:intergenic 30.0%
AGAACCTAATGAAAGGATAT+TGG + chr4.2:9054547-9054566 None:intergenic 30.0%
AGACGTTTCAATATCACTAA+AGG - chr4.2:9055818-9055837 MS.gene57390:intron 30.0%
ATATCATGTCTTGTCACAAA+AGG + chr4.2:9054648-9054667 None:intergenic 30.0%
ATTCTCTCTAATGCCAATTT+GGG + chr4.2:9053654-9053673 None:intergenic 30.0%
CAACTTAATTGCATAACAGA+TGG + chr4.2:9051906-9051925 None:intergenic 30.0%
CATACAAATCATGAATTGCA+TGG - chr4.2:9052304-9052323 MS.gene57390:intron 30.0%
CCAATAATTAATCTTTAGCG+GGG - chr4.2:9050223-9050242 MS.gene57390:intron 30.0%
CGATATCATTCATATTGCTT+GGG - chr4.2:9050938-9050957 MS.gene57390:intron 30.0%
CTAAATATTAGAAACAGGCT+TGG + chr4.2:9053445-9053464 None:intergenic 30.0%
CTACATATTCAAGACAAAAC+AGG + chr4.2:9053177-9053196 None:intergenic 30.0%
CTTAATTGATTGCTCAGTAA+AGG + chr4.2:9054882-9054901 None:intergenic 30.0%
CTTTACTGAGCAATCAATTA+AGG - chr4.2:9054880-9054899 MS.gene57390:intron 30.0%
GAACCTAATGAAAGGATATT+GGG + chr4.2:9054546-9054565 None:intergenic 30.0%
GACGTTTCAATATCACTAAA+GGG - chr4.2:9055819-9055838 MS.gene57390:intron 30.0%
GCAATCTGTTTAATGATCTT+TGG - chr4.2:9051266-9051285 MS.gene57390:intron 30.0%
GCATTGAATATTTGATAAGG+AGG - chr4.2:9054115-9054134 MS.gene57390:intron 30.0%
GTAAAAGAAGACAATGAAGA+AGG - chr4.2:9052243-9052262 MS.gene57390:intron 30.0%
GTGAAACGTAAATTCTCTTT+GGG - chr4.2:9052707-9052726 MS.gene57390:intron 30.0%
TAAAAGTTATCATTTCCGGA+GGG + chr4.2:9052081-9052100 None:intergenic 30.0%
TAAACTTTATCATTTCCGGA+GGG + chr4.2:9052176-9052195 None:intergenic 30.0%
TAAATCCTTGTCCATTAGAT+TGG - chr4.2:9050139-9050158 MS.gene57390:CDS 30.0%
TAATAGTCTGTAGGATTCAA+TGG - chr4.2:9051018-9051037 MS.gene57390:intron 30.0%
TACTACATCTCAATCTTAGA+TGG + chr4.2:9054812-9054831 None:intergenic 30.0%
TACTTGGAACAATGTGATAT+TGG - chr4.2:9050315-9050334 MS.gene57390:intron 30.0%
TAGCACTGCATTCAATAAAT+AGG + chr4.2:9052585-9052604 None:intergenic 30.0%
TCCCTAAACTTTATCATTTC+CGG + chr4.2:9052180-9052199 None:intergenic 30.0%
TCCGGAAATGATAAAGTTTA+GGG - chr4.2:9052176-9052195 MS.gene57390:intron 30.0%
TCGATATCATTCATATTGCT+TGG - chr4.2:9050937-9050956 MS.gene57390:intron 30.0%
TCTATCCACTGAATATATCA+CGG + chr4.2:9050606-9050625 None:intergenic 30.0%
TCTGTCACCAATTTCATATA+GGG + chr4.2:9055775-9055794 None:intergenic 30.0%
TCTTTCATCTAATAGTCTGT+AGG - chr4.2:9051009-9051028 MS.gene57390:intron 30.0%
TGAATTCCAAGTTCTCTATA+AGG + chr4.2:9051668-9051687 None:intergenic 30.0%
TGGGCGATTCTATTAAAAAT+GGG + chr4.2:9055138-9055157 None:intergenic 30.0%
TGTGAAACGTAAATTCTCTT+TGG - chr4.2:9052706-9052725 MS.gene57390:intron 30.0%
TGTTGGAAACAAAGTAGATA+AGG - chr4.2:9051486-9051505 MS.gene57390:CDS 30.0%
TTAATTGCATAACAGATGGA+CGG + chr4.2:9051902-9051921 None:intergenic 30.0%
TTACCCAATATCCTTTCATT+AGG - chr4.2:9054540-9054559 MS.gene57390:intron 30.0%
TTATAGGATTTGACATGTGT+TGG - chr4.2:9052472-9052491 MS.gene57390:intron 30.0%
TTCTATAATCCGAGAGATAA+GGG - chr4.2:9054945-9054964 MS.gene57390:intron 30.0%
TTGACACTTCTGCTTATTTA+AGG - chr4.2:9051828-9051847 MS.gene57390:intron 30.0%
TTGGGCGATTCTATTAAAAA+TGG + chr4.2:9055139-9055158 None:intergenic 30.0%
TTGTTGCAAATAACCTACTT+GGG + chr4.2:9053738-9053757 None:intergenic 30.0%
TTTCAATCACCTACAAAAAC+AGG + chr4.2:9055701-9055720 None:intergenic 30.0%
TTTCTATAATCCGAGAGATA+AGG - chr4.2:9054944-9054963 MS.gene57390:intron 30.0%
TTTCTTCCTTATAGAGAACT+TGG - chr4.2:9051659-9051678 MS.gene57390:intron 30.0%
TTTGTTGCAAATAACCTACT+TGG + chr4.2:9053739-9053758 None:intergenic 30.0%
! ATGTTTGTGCTTGTATTTTC+AGG - chr4.2:9052501-9052520 MS.gene57390:intron 30.0%
! CTGTTATCACATTTGTTTCT+AGG - chr4.2:9052392-9052411 MS.gene57390:intron 30.0%
! GGATTTCTAACATAATTTGC+TGG - chr4.2:9053102-9053121 MS.gene57390:intron 30.0%
! TAGGTTCATTTTGTATTTGG+TGG - chr4.2:9055597-9055616 MS.gene57390:intron 30.0%
! TCATAAACTGCATCAGTTTT+GGG + chr4.2:9051373-9051392 None:intergenic 30.0%
! TGTTTTTCACACAAGTTCAA+TGG - chr4.2:9052800-9052819 MS.gene57390:intron 30.0%
!! AGCTTCGATTTTGATAAGAA+TGG + chr4.2:9050892-9050911 None:intergenic 30.0%
!! CTGCTTATTTAAGGTGTTTT+TGG - chr4.2:9051837-9051856 MS.gene57390:intron 30.0%
!! GTTTAATGATCTTTGGAGTT+GGG - chr4.2:9051273-9051292 MS.gene57390:intron 30.0%
!! TGTTTAATGATCTTTGGAGT+TGG - chr4.2:9051272-9051291 MS.gene57390:intron 30.0%
!!! ACTGGGGATTTTTTTTTCTT+TGG - chr4.2:9052893-9052912 MS.gene57390:CDS 30.0%
!!! ATGGTTTTATGATTTCGCAA+TGG + chr4.2:9054224-9054243 None:intergenic 30.0%
!!! GTTTTGGGAACAAAATATAG+AGG + chr4.2:9051358-9051377 None:intergenic 30.0%
!!! TATCACAGGTGTTGATTTTA+AGG - chr4.2:9049995-9050014 MS.gene57390:intron 30.0%
!!! TTGAGAGGGTTTATTTTGAT+TGG - chr4.2:9053844-9053863 MS.gene57390:intron 30.0%
AAAAGCTTAAGCTTGCCATT+TGG - chr4.2:9050042-9050061 MS.gene57390:intron 35.0%
AAACACTCACACAAGTGTTT+GGG - chr4.2:9055076-9055095 MS.gene57390:intron 35.0%
AAGAATACAGCAATCCAGAT+TGG + chr4.2:9050637-9050656 None:intergenic 35.0%
AAGCAGCATTTCAAGAATCA+CGG - chr4.2:9053046-9053065 MS.gene57390:intron 35.0%
AAGCAGGAAAAGGAATGAAA+AGG + chr4.2:9054346-9054365 None:intergenic 35.0%
AAGGCAAGCCAAAAAATACA+TGG + chr4.2:9051605-9051624 None:intergenic 35.0%
AAGGCCAATTGTATATATGG+GGG - chr4.2:9050349-9050368 MS.gene57390:intron 35.0%
AATGAAAGGAAACGAACCAA+TGG + chr4.2:9049909-9049928 None:intergenic 35.0%
AATTGATTGCTCAGTAAAGG+TGG + chr4.2:9054879-9054898 None:intergenic 35.0%
ACAAGCAAGAACCTAATGAA+AGG + chr4.2:9054554-9054573 None:intergenic 35.0%
ACGAAAAAATGTGGTTGCAA+GGG + chr4.2:9050253-9050272 None:intergenic 35.0%
AGAGAACTAATCAAACTTGG+AGG + chr4.2:9056082-9056101 None:intergenic 35.0%
AGAGTTGTGACAAAGAAAGA+GGG - chr4.2:9052532-9052551 MS.gene57390:intron 35.0%
AGCATGCTTATCTGCATATA+AGG + chr4.2:9055969-9055988 None:intergenic 35.0%
AGGAAGTGAAGTGAAAAGTA+TGG - chr4.2:9054154-9054173 MS.gene57390:intron 35.0%
ATACATACCAGTATCCCAAA+TGG + chr4.2:9050060-9050079 None:intergenic 35.0%
ATAGACTTTGCTAGGGAATA+TGG - chr4.2:9052556-9052575 MS.gene57390:intron 35.0%
ATCATAAAAAAGCTCTGCAC+TGG + chr4.2:9053529-9053548 None:intergenic 35.0%
ATGAAAAGGAAACTAGAGAG+GGG + chr4.2:9054332-9054351 None:intergenic 35.0%
ATGATTTCGCAATGGAAGAT+TGG + chr4.2:9054216-9054235 None:intergenic 35.0%
ATGCAGTTTATGACGTAACA+CGG - chr4.2:9051380-9051399 MS.gene57390:CDS 35.0%
CAAAGTTCATGCCAAGAATT+GGG - chr4.2:9055340-9055359 MS.gene57390:intron 35.0%
CAACAGAGTTGAAGAATAAG+AGG + chr4.2:9055251-9055270 None:intergenic 35.0%
CACATTGTTCCAAGTAAAAG+TGG + chr4.2:9050311-9050330 None:intergenic 35.0%
CACGCATCAACTTAAAGAAA+AGG + chr4.2:9051305-9051324 None:intergenic 35.0%
CCCCGCTAAAGATTAATTAT+TGG + chr4.2:9050226-9050245 None:intergenic 35.0%
CTAAAAGTTATCATTTCCGG+AGG + chr4.2:9052082-9052101 None:intergenic 35.0%
CTAAACTTTATCATTTCCGG+AGG + chr4.2:9052177-9052196 None:intergenic 35.0%
CTAACAAAGAAAGTCCAACT+TGG + chr4.2:9051202-9051221 None:intergenic 35.0%
CTCCGGAAATGATAAAGTTT+AGG - chr4.2:9052175-9052194 MS.gene57390:intron 35.0%
CTCTGTCACCAATTTCATAT+AGG + chr4.2:9055776-9055795 None:intergenic 35.0%
CTCTTATTCTTCAACTCTGT+TGG - chr4.2:9055249-9055268 MS.gene57390:intron 35.0%
CTCTTGTCATCTTAATCTGT+TGG - chr4.2:9053379-9053398 MS.gene57390:intron 35.0%
CTGCAATCATAGGCTATTTA+AGG + chr4.2:9054975-9054994 None:intergenic 35.0%
CTTAAATAGCCTATGATTGC+AGG - chr4.2:9054973-9054992 MS.gene57390:intron 35.0%
CTTGCTCATACATTACTTCT+CGG - chr4.2:9055552-9055571 MS.gene57390:intron 35.0%
GAAGAATTGAGAGGCAAAAA+AGG + chr4.2:9050532-9050551 None:intergenic 35.0%
GAAGAGTTGCAATTGTAAAC+TGG + chr4.2:9056009-9056028 None:intergenic 35.0%
GAATGAAAAGGAAACTAGAG+AGG + chr4.2:9054334-9054353 None:intergenic 35.0%
GACTTTCTTTGTTAGTGATG+GGG - chr4.2:9051207-9051226 MS.gene57390:intron 35.0%
GAGATCATCAAAATCATCTG+AGG + chr4.2:9049879-9049898 None:intergenic 35.0%
GAGGTAGAAAGCAAAATATC+AGG - chr4.2:9054134-9054153 MS.gene57390:intron 35.0%
GATTCTCTCTAATGCCAATT+TGG + chr4.2:9053655-9053674 None:intergenic 35.0%
GCAATCAATTAAGGGAAGTT+TGG - chr4.2:9054889-9054908 MS.gene57390:intron 35.0%
GCTATGAAATTGAACTTACC+TGG + chr4.2:9055849-9055868 None:intergenic 35.0%
GGACTTTCTTTGTTAGTGAT+GGG - chr4.2:9051206-9051225 MS.gene57390:intron 35.0%
GTACTATTGGAAGAATTGAG+AGG + chr4.2:9050541-9050560 None:intergenic 35.0%
GTCAAATATGTCACGATAGA+GGG - chr4.2:9050017-9050036 MS.gene57390:intron 35.0%
GTTATGCCATGAAATAGATG+AGG + chr4.2:9055628-9055647 None:intergenic 35.0%
GTTCAATGGCTGACAATAAA+TGG - chr4.2:9052814-9052833 MS.gene57390:intron 35.0%
TAATTGCATAACAGATGGAC+GGG + chr4.2:9051901-9051920 None:intergenic 35.0%
TAGAGTTGTGACAAAGAAAG+AGG - chr4.2:9052531-9052550 MS.gene57390:intron 35.0%
TCAAAGTTCATGCCAAGAAT+TGG - chr4.2:9055339-9055358 MS.gene57390:intron 35.0%
TCTAGTAAAGTCCCAATTCT+TGG + chr4.2:9055354-9055373 None:intergenic 35.0%
TGAAATGAGACCATGCTTAA+GGG - chr4.2:9050277-9050296 MS.gene57390:intron 35.0%
TGACAAGTTCTTACTACAGA+GGG - chr4.2:9050471-9050490 MS.gene57390:intron 35.0%
TGAGAACTTTCCAAATCACA+AGG + chr4.2:9055482-9055501 None:intergenic 35.0%
TGCAGAGAACTAATCAAACT+TGG + chr4.2:9056085-9056104 None:intergenic 35.0%
TGGACTTTCTTTGTTAGTGA+TGG - chr4.2:9051205-9051224 MS.gene57390:intron 35.0%
TGTAAAACTGAGAGTCCAAA+TGG + chr4.2:9052333-9052352 None:intergenic 35.0%
TTCAAGACAAAACAGGAAGT+TGG + chr4.2:9053170-9053189 None:intergenic 35.0%
TTGAAATGAGACCATGCTTA+AGG - chr4.2:9050276-9050295 MS.gene57390:intron 35.0%
TTGCTCATACATTACTTCTC+GGG - chr4.2:9055553-9055572 MS.gene57390:intron 35.0%
TTGTTAATGATTGGGGATTC+TGG - chr4.2:9049821-9049840 MS.gene57390:CDS 35.0%
TTTCAAGCCACGAAAAAATG+TGG + chr4.2:9050262-9050281 None:intergenic 35.0%
TTTCCACCTTCTAATATGCA+TGG + chr4.2:9052738-9052757 None:intergenic 35.0%
TTTGTTTGCATCCTTTCATG+TGG - chr4.2:9052266-9052285 MS.gene57390:intron 35.0%
! AAACTCCAATCTAATGGACA+AGG + chr4.2:9050147-9050166 None:intergenic 35.0%
! AAAGCTTAAGCTTGCCATTT+GGG - chr4.2:9050043-9050062 MS.gene57390:intron 35.0%
! AGTGAAGTGAAAAGTATGGT+AGG - chr4.2:9054158-9054177 MS.gene57390:intron 35.0%
! CTAACAAATCAGTTGTTTCC+AGG + chr4.2:9050981-9051000 None:intergenic 35.0%
! CTCCGGAAATGATAACTTTT+AGG - chr4.2:9052080-9052099 MS.gene57390:intron 35.0%
! GCGTGTTGAAAACTTAGTTT+TGG - chr4.2:9051320-9051339 MS.gene57390:intron 35.0%
! GTCATAAACTGCATCAGTTT+TGG + chr4.2:9051374-9051393 None:intergenic 35.0%
! GTTCCAAGTAAAAGTGGATT+TGG + chr4.2:9050305-9050324 None:intergenic 35.0%
! GTTTTACCAAATAATGCAGC+TGG - chr4.2:9050428-9050447 MS.gene57390:intron 35.0%
! TTCATTCCTTTTCCTGCTTT+TGG - chr4.2:9054347-9054366 MS.gene57390:intron 35.0%
!! AATATTGCAGTCATTTTGGC+AGG + chr4.2:9051236-9051255 None:intergenic 35.0%
!! ATATTGCAGTCATTTTGGCA+GGG + chr4.2:9051235-9051254 None:intergenic 35.0%
!! GATCCAAATCCACTTTTACT+TGG - chr4.2:9050299-9050318 MS.gene57390:intron 35.0%
!! TTGTGCTTGTATTTTCAGGA+GGG - chr4.2:9052505-9052524 MS.gene57390:intron 35.0%
!! TTGTTTTGTGCTTTTGCTTC+TGG - chr4.2:9052033-9052052 MS.gene57390:intron 35.0%
!! TTTGTGCTTGTATTTTCAGG+AGG - chr4.2:9052504-9052523 MS.gene57390:intron 35.0%
!!! AAAGCTTTTTTGTTGCCTCA+TGG - chr4.2:9050748-9050767 MS.gene57390:intron 35.0%
!!! AACATGCTACCTGTTTTTGT+AGG - chr4.2:9055689-9055708 MS.gene57390:intron 35.0%
!!! CTAACCTTATTTTGGTCAGT+AGG - chr4.2:9052681-9052700 MS.gene57390:intron 35.0%
!!! CTTTGAAGAGCTTGTTTTGA+AGG - chr4.2:9052630-9052649 MS.gene57390:intron 35.0%
!!! TTTTTTCTTTGGTTGCATGC+AGG - chr4.2:9052904-9052923 MS.gene57390:CDS 35.0%
AAAGGAAACGAACCAATGGT+GGG + chr4.2:9049905-9049924 None:intergenic 40.0%
AACACTCAGCACATCTTTAC+AGG + chr4.2:9053280-9053299 None:intergenic 40.0%
AAGAGGGAATAGACTTTGCT+AGG - chr4.2:9052548-9052567 MS.gene57390:intron 40.0%
AAGATGAGCCTGTGCAATTT+CGG - chr4.2:9052769-9052788 MS.gene57390:intron 40.0%
AATGGAAGATTGGAAATGGG+TGG + chr4.2:9054206-9054225 None:intergenic 40.0%
AGAAGAAGCAATAGCAGAGA+TGG - chr4.2:9055794-9055813 MS.gene57390:intron 40.0%
AGAGGCAAAAAAGGGAGAAT+AGG + chr4.2:9050523-9050542 None:intergenic 40.0%
AGAGGGAATAGACTTTGCTA+GGG - chr4.2:9052549-9052568 MS.gene57390:intron 40.0%
AGCATTCTCTGAGTATGCAA+GGG - chr4.2:9055734-9055753 MS.gene57390:intron 40.0%
AGTAAAGGTGGAAAAGCCAA+TGG + chr4.2:9054867-9054886 None:intergenic 40.0%
ATCTCACAAAGAGTTTCTCG+TGG - chr4.2:9054440-9054459 MS.gene57390:CDS 40.0%
ATGTTAGAGACACAAAGCAC+TGG - chr4.2:9056056-9056075 MS.gene57390:CDS 40.0%
CAAACACTCACACAAGTGTT+TGG - chr4.2:9055075-9055094 MS.gene57390:intron 40.0%
CAAACACTTGTGTGAGTGTT+TGG + chr4.2:9055077-9055096 None:intergenic 40.0%
CAACACCTGTGATAGATAGT+AGG + chr4.2:9049989-9050008 None:intergenic 40.0%
CAACCATGCATATTAGAAGG+TGG - chr4.2:9052732-9052751 MS.gene57390:intron 40.0%
CACACAATCACTTGTGAGAA+GGG - chr4.2:9053483-9053502 MS.gene57390:intron 40.0%
CACACCTACTGACCAAAATA+AGG + chr4.2:9052688-9052707 None:intergenic 40.0%
CACGAAAAAATGTGGTTGCA+AGG + chr4.2:9050254-9050273 None:intergenic 40.0%
CATCTTTACAGGTCTTCACA+TGG + chr4.2:9053269-9053288 None:intergenic 40.0%
CGAGAAGTAATGTATGAGCA+AGG + chr4.2:9055554-9055573 None:intergenic 40.0%
CGATCTGCGATTTACTTAGA+AGG + chr4.2:9051729-9051748 None:intergenic 40.0%
CGCAATGGAAGATTGGAAAT+GGG + chr4.2:9054209-9054228 None:intergenic 40.0%
CTCTCCCCCATATATACAAT+TGG + chr4.2:9050356-9050375 None:intergenic 40.0%
CTCTTTCAGAACGAGTTACT+GGG + chr4.2:9054406-9054425 None:intergenic 40.0%
CTGACAAGTTCTTACTACAG+AGG - chr4.2:9050470-9050489 MS.gene57390:intron 40.0%
GAAGTTGGAACCTAGAAAAC+TGG + chr4.2:9053155-9053174 None:intergenic 40.0%
GAATATCAGCCAGTATATCC+TGG - chr4.2:9050960-9050979 MS.gene57390:intron 40.0%
GAATGTACAGGCTTCAAACA+CGG + chr4.2:9053552-9053571 None:intergenic 40.0%
GACAAGTTCTTACTACAGAG+GGG - chr4.2:9050472-9050491 MS.gene57390:intron 40.0%
GATAGAATAGGATGCCAATC+TGG - chr4.2:9050620-9050639 MS.gene57390:intron 40.0%
GATGACCGTGATATATTCAG+TGG - chr4.2:9050598-9050617 MS.gene57390:intron 40.0%
GCACTAGCCCTATATGAAAT+TGG - chr4.2:9055765-9055784 MS.gene57390:intron 40.0%
GGAACCTAGAAAACTGGAAA+TGG + chr4.2:9053149-9053168 None:intergenic 40.0%
GGTCAAATATGTCACGATAG+AGG - chr4.2:9050016-9050035 MS.gene57390:intron 40.0%
GTGCAACCATGCATATTAGA+AGG - chr4.2:9052729-9052748 MS.gene57390:intron 40.0%
TAAGGCTTACCCTTATCTCT+CGG + chr4.2:9054957-9054976 None:intergenic 40.0%
TAGAGAGGGGAATAGAGAAA+AGG + chr4.2:9054319-9054338 None:intergenic 40.0%
TAGCATTCTCTGAGTATGCA+AGG - chr4.2:9055733-9055752 MS.gene57390:intron 40.0%
TCACACAATCACTTGTGAGA+AGG - chr4.2:9053482-9053501 MS.gene57390:intron 40.0%
TCGCAATGGAAGATTGGAAA+TGG + chr4.2:9054210-9054229 None:intergenic 40.0%
TCTAAGTAAATCGCAGATCG+CGG - chr4.2:9051729-9051748 MS.gene57390:intron 40.0%
TCTCTAATGCCAATTTGGGT+GGG + chr4.2:9053650-9053669 None:intergenic 40.0%
TCTCTTTCAGAACGAGTTAC+TGG + chr4.2:9054407-9054426 None:intergenic 40.0%
TGAATTGCATGGACTCCATT+TGG - chr4.2:9052315-9052334 MS.gene57390:intron 40.0%
TTGCATACTCAGAGAATGCT+AGG + chr4.2:9055734-9055753 None:intergenic 40.0%
TTGTGATGAACAATGGCTGA+TGG - chr4.2:9052868-9052887 MS.gene57390:intron 40.0%
TTTAGCCACATGAAGTTGCA+AGG + chr4.2:9055525-9055544 None:intergenic 40.0%
! ACTTTAGAGGCCTTGTGATT+TGG - chr4.2:9055469-9055488 MS.gene57390:intron 40.0%
! CAGTTGTTTCCAGGATATAC+TGG + chr4.2:9050972-9050991 None:intergenic 40.0%
! CGCTCTTCAATACTTTTCTC+AGG - chr4.2:9054517-9054536 MS.gene57390:intron 40.0%
! CTCTGTTGGTTGTTTATCTG+AGG - chr4.2:9055263-9055282 MS.gene57390:intron 40.0%
! GAAGCCATTTCCAGTTTTCT+AGG - chr4.2:9053142-9053161 MS.gene57390:intron 40.0%
! GTGATTTGGAAAGTTCTCAG+AGG - chr4.2:9055483-9055502 MS.gene57390:intron 40.0%
! TTGTTTTCTGAGTAGGGCTA+AGG - chr4.2:9050706-9050725 MS.gene57390:intron 40.0%
!! AATCACAAGGCCTCTAAAGT+CGG + chr4.2:9055469-9055488 None:intergenic 40.0%
!! ATATCACTAAAGGGGTATCC+AGG - chr4.2:9055828-9055847 MS.gene57390:intron 40.0%
!! GGAAGAAAACTTTAAAGCGC+TGG + chr4.2:9051647-9051666 None:intergenic 40.0%
!! TCATTTTTCTGACCTCTGCT+GGG - chr4.2:9050814-9050833 MS.gene57390:intron 40.0%
!! TCTCTCTGAAATATGGGCAA+AGG - chr4.2:9051420-9051439 MS.gene57390:CDS 40.0%
!! TTTAGAGAGTACTGCAGAGA+AGG - chr4.2:9051790-9051809 MS.gene57390:intron 40.0%
!!! CTTGCAACCACATTTTTTCG+TGG - chr4.2:9050252-9050271 MS.gene57390:intron 40.0%
AAACTCCTGCAGAAACATGC+TGG + chr4.2:9051952-9051971 None:intergenic 45.0%
AATCACGGTCTCCAAGAGAA+GGG - chr4.2:9053061-9053080 MS.gene57390:intron 45.0%
ACCAAATAATGCAGCTGGTC+AGG - chr4.2:9050433-9050452 MS.gene57390:intron 45.0%
AGATGAGCCTGTGCAATTTC+GGG - chr4.2:9052770-9052789 MS.gene57390:intron 45.0%
AGCATGATTGCTTATCCCTC+CGG - chr4.2:9052063-9052082 MS.gene57390:intron 45.0%
ATCACGGTCATCAATACTCG+AGG + chr4.2:9050590-9050609 None:intergenic 45.0%
ATCCACCTTGCAACTTCATG+TGG - chr4.2:9055517-9055536 MS.gene57390:intron 45.0%
ATGATTGGGGATTCTGGTGT+TGG - chr4.2:9049827-9049846 MS.gene57390:CDS 45.0%
CCTTCACCAAAAGCAGGAAA+AGG + chr4.2:9054356-9054375 None:intergenic 45.0%
CGAAATGAGTGACGTCGAAT+AGG - chr4.2:9055578-9055597 MS.gene57390:intron 45.0%
CGTCTCCTACTATCTATCAC+AGG - chr4.2:9049981-9050000 MS.gene57390:intron 45.0%
CTAAACTAGCCCACCCAAAT+TGG - chr4.2:9053638-9053657 MS.gene57390:intron 45.0%
CTCTCTAATGCCAATTTGGG+TGG + chr4.2:9053651-9053670 None:intergenic 45.0%
GAAAGGAAACGAACCAATGG+TGG + chr4.2:9049906-9049925 None:intergenic 45.0%
GACTGCATGAAGATGCTTGT+TGG - chr4.2:9051469-9051488 MS.gene57390:CDS 45.0%
GAGGCAAAGATGTCACACAA+TGG - chr4.2:9055282-9055301 MS.gene57390:intron 45.0%
GCTCGACCTCATCTATTTCA+TGG - chr4.2:9055619-9055638 MS.gene57390:intron 45.0%
GGATTTGGATCCCTTAAGCA+TGG + chr4.2:9050290-9050309 None:intergenic 45.0%
GTAGGATTCAATGGCCAAGT+TGG - chr4.2:9051185-9051204 MS.gene57390:intron 45.0%
TCCTGACCAGCTGCATTATT+TGG + chr4.2:9050437-9050456 None:intergenic 45.0%
TCTCTGAGTATGCAAGGGTA+GGG - chr4.2:9055739-9055758 MS.gene57390:intron 45.0%
TTCTCTGAGTATGCAAGGGT+AGG - chr4.2:9055738-9055757 MS.gene57390:intron 45.0%
TTTCATGTAAGCTCCCCCAA+TGG + chr4.2:9054999-9055018 None:intergenic 45.0%
! AACAATGGCTGATGGTGACT+GGG - chr4.2:9052876-9052895 MS.gene57390:intron 45.0%
! AAGCTTGCCATTTGGGATAC+TGG - chr4.2:9050050-9050069 MS.gene57390:intron 45.0%
! GGTGTTGAGTTGTTGGAGAA+AGG - chr4.2:9054461-9054480 MS.gene57390:CDS 45.0%
! TCAAAGAGGAGCACACTTTC+AGG - chr4.2:9053687-9053706 MS.gene57390:intron 45.0%
! TGAAAGTGTGCTCCTCTTTG+AGG + chr4.2:9053688-9053707 None:intergenic 45.0%
! TTCTCGTGGTGTTGAGTTGT+TGG - chr4.2:9054454-9054473 MS.gene57390:CDS 45.0%
! TTTTACTCCCTTAGAGCCCT+CGG + chr4.2:9052954-9052973 None:intergenic 45.0%
!! ATAACCTACTTGGGTTGACC+TGG + chr4.2:9053729-9053748 None:intergenic 45.0%
!! CCTTTTCCTGCTTTTGGTGA+AGG - chr4.2:9054353-9054372 MS.gene57390:intron 45.0%
!! GGGCATTGCATCCATTTTCA+TGG - chr4.2:9053081-9053100 MS.gene57390:intron 45.0%
!! TGACCTGGTGGTATTGACTT+GGG + chr4.2:9053714-9053733 None:intergenic 45.0%
!! TTGACCTGGTGGTATTGACT+TGG + chr4.2:9053715-9053734 None:intergenic 45.0%
!!! GAGGAAAGTGCTTTTGCTTC+TGG - chr4.2:9052128-9052147 MS.gene57390:intron 45.0%
!!! GTCATTTTTCTGACCTCTGC+TGG - chr4.2:9050813-9050832 MS.gene57390:intron 45.0%
!! TATTTGTATATAAATAAATA+AGG + chr4.2:9053916-9053935 None:intergenic 5.0%
!!! ATATTTTTTATGTATTTTTT+AGG + chr4.2:9053949-9053968 None:intergenic 5.0%
AGCCACATGAAGTTGCAAGG+TGG + chr4.2:9055522-9055541 None:intergenic 50.0%
AGCCTATGATTGCAGGCCAT+TGG - chr4.2:9054980-9054999 MS.gene57390:intron 50.0%
AGCCTGTGCAATTTCGGGAA+AGG - chr4.2:9052775-9052794 MS.gene57390:intron 50.0%
AGGGGCTCAAGGAATCATCA+TGG - chr4.2:9050490-9050509 MS.gene57390:intron 50.0%
ATAGCTTCAGCAACAACCGC+TGG + chr4.2:9053017-9053036 None:intergenic 50.0%
CCTATGATTGCAGGCCATTG+GGG - chr4.2:9054982-9055001 MS.gene57390:intron 50.0%
CTATGATTGCAGGCCATTGG+GGG - chr4.2:9054983-9055002 MS.gene57390:intron 50.0%
CTCCTTTCCCGAAATTGCAC+AGG + chr4.2:9052780-9052799 None:intergenic 50.0%
CTGTCACCTTCACCAAAAGC+AGG + chr4.2:9054362-9054381 None:intergenic 50.0%
GAAGTTGCAAGGTGGATGAG+TGG + chr4.2:9055514-9055533 None:intergenic 50.0%
GAATCACGGTCTCCAAGAGA+AGG - chr4.2:9053060-9053079 MS.gene57390:intron 50.0%
GATGATCTCTCTCCCACCAT+TGG - chr4.2:9049890-9049909 MS.gene57390:CDS 50.0%
GCCTATGATTGCAGGCCATT+GGG - chr4.2:9054981-9055000 MS.gene57390:intron 50.0%
GGAGAAAGGTAGAGAGTTGC+AGG - chr4.2:9054475-9054494 MS.gene57390:CDS 50.0%
GGGGCTCAAGGAATCATCAT+GGG - chr4.2:9050491-9050510 MS.gene57390:intron 50.0%
TCAGCAAACATTCCCAGCAG+AGG + chr4.2:9050829-9050848 None:intergenic 50.0%
TCGAAGCTGAGACCTCAAAG+AGG - chr4.2:9053673-9053692 MS.gene57390:intron 50.0%
TCGCAGATCGCGGAAAATAG+CGG - chr4.2:9051739-9051758 MS.gene57390:intron 50.0%
TCTTACTACAGAGGGGCTCA+AGG - chr4.2:9050479-9050498 MS.gene57390:intron 50.0%
TGGATGCAATGCCCTTCTCT+TGG + chr4.2:9053075-9053094 None:intergenic 50.0%
! ACAATGGCTGATGGTGACTG+GGG - chr4.2:9052877-9052896 MS.gene57390:intron 50.0%
! CAGGCTCTTGGTGACTTCAA+TGG - chr4.2:9054494-9054513 MS.gene57390:CDS 50.0%
! GAACAATGGCTGATGGTGAC+TGG - chr4.2:9052875-9052894 MS.gene57390:intron 50.0%
! GGTTACCAGCATGTTTCTGC+AGG - chr4.2:9051944-9051963 MS.gene57390:intron 50.0%
!! ACACCTAGCCTTTTAGCCGA+GGG - chr4.2:9052935-9052954 MS.gene57390:CDS 50.0%
!! AGAGAGTACTGCAGAGAAGG+AGG - chr4.2:9051793-9051812 MS.gene57390:intron 50.0%
!! CTTTTAGCCGAGGGCTCTAA+GGG - chr4.2:9052944-9052963 MS.gene57390:CDS 50.0%
!! GAGAGTACTGCAGAGAAGGA+GGG - chr4.2:9051794-9051813 MS.gene57390:intron 50.0%
!! TACACCTAGCCTTTTAGCCG+AGG - chr4.2:9052934-9052953 MS.gene57390:CDS 50.0%
ACCACCAGGTCAACCCAAGT+AGG - chr4.2:9053722-9053741 MS.gene57390:intron 55.0%
CAGTCTGATGCATCCACCAG+CGG - chr4.2:9052998-9053017 MS.gene57390:intron 55.0%
CCCCAATGGCCTGCAATCAT+AGG + chr4.2:9054985-9055004 None:intergenic 55.0%
CCTTAGAGCCCTCGGCTAAA+AGG + chr4.2:9052946-9052965 None:intergenic 55.0%
GGTAGAGAGTTGCAGGCTCT+TGG - chr4.2:9054482-9054501 MS.gene57390:CDS 55.0%
GGTCCCAAGTCAATACCACC+AGG - chr4.2:9053708-9053727 MS.gene57390:intron 55.0%
TACTGCAGAGAAGGAGGGTG+AGG - chr4.2:9051799-9051818 MS.gene57390:intron 55.0%
! CCTTTTAGCCGAGGGCTCTA+AGG - chr4.2:9052943-9052962 MS.gene57390:CDS 55.0%
! CTGGTGGATGCATCAGACTG+AGG + chr4.2:9052998-9053017 None:intergenic 55.0%
!! ACCTACTTGGGTTGACCTGG+TGG + chr4.2:9053726-9053745 None:intergenic 55.0%
GAGCCCTCGGCTAAAAGGCT+AGG + chr4.2:9052941-9052960 None:intergenic 60.0%
GCTTCAGCAACAACCGCTGG+TGG + chr4.2:9053014-9053033 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 9049776 9056126 9049776 ID=MS.gene57390
chr4.2 mRNA 9049776 9056126 9049776 ID=MS.gene57390.t1;Parent=MS.gene57390
chr4.2 exon 9055991 9056126 9055991 ID=MS.gene57390.t1.exon1;Parent=MS.gene57390.t1
chr4.2 CDS 9055991 9056126 9055991 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9055831 9055899 9055831 ID=MS.gene57390.t1.exon2;Parent=MS.gene57390.t1
chr4.2 CDS 9055831 9055899 9055831 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9055390 9055455 9055390 ID=MS.gene57390.t1.exon3;Parent=MS.gene57390.t1
chr4.2 CDS 9055390 9055455 9055390 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9054395 9054516 9054395 ID=MS.gene57390.t1.exon4;Parent=MS.gene57390.t1
chr4.2 CDS 9054395 9054516 9054395 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9053251 9053379 9053251 ID=MS.gene57390.t1.exon5;Parent=MS.gene57390.t1
chr4.2 CDS 9053251 9053379 9053251 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9052883 9052976 9052883 ID=MS.gene57390.t1.exon6;Parent=MS.gene57390.t1
chr4.2 CDS 9052883 9052976 9052883 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9051364 9051527 9051364 ID=MS.gene57390.t1.exon7;Parent=MS.gene57390.t1
chr4.2 CDS 9051364 9051527 9051364 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9050053 9050191 9050053 ID=MS.gene57390.t1.exon8;Parent=MS.gene57390.t1
chr4.2 CDS 9050053 9050191 9050053 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
chr4.2 exon 9049776 9049960 9049776 ID=MS.gene57390.t1.exon9;Parent=MS.gene57390.t1
chr4.2 CDS 9049776 9049960 9049776 ID=cds.MS.gene57390.t1;Parent=MS.gene57390.t1
Gene Sequence

>MS.gene57390

ATGGATTCGAGTTCAGGGCAGCAAGAATTCGATTATATGTTCAAATTGTTAATGATTGGGGATTCTGGTGTTGGCAAAAGTAGTCTTCTTCTCAGATTCACCTCAGATGATTTTGATGATCTCTCTCCCACCATTGGTTCGTTTCCTTTCATTCCTTAATTGATTTAATTCTATCTATATGCACTCTGTGATCTTCTTCTTCATGCGTCTCCTACTATCTATCACAGGTGTTGATTTTAAGGTCAAATATGTCACGATAGAGGGTAAAAAGCTTAAGCTTGCCATTTGGGATACTGGTATGTATGTATGTATGTATGCTTATTAATTATTATTCACTTTTCATTTTTATTTTTATACCATTTTTAAATCCTTGTCCATTAGATTGGAGTTTTATTTATTTTGTAATCTTGTTATTGGTGGTGCTCAGTATGCATCCATCAACTTTTACCAATAATTAATCTTTAGCGGGGTCTTCCCTTGCAACCACATTTTTTCGTGGCTTGAAATGAGACCATGCTTAAGGGATCCAAATCCACTTTTACTTGGAACAATGTGATATTGGTTTTTAGATTAAAGGCCAATTGTATATATGGGGGAGAGACCTTTTAAATTGTCTTCCCAATACCCTATTTGATTGATATTCTACTTTTTTGTTTTACCAAATAATGCAGCTGGTCAGGAGAGATTTAGAACACTGACAAGTTCTTACTACAGAGGGGCTCAAGGAATCATCATGGGCAAGTTCCTATTCTCCCTTTTTTGCCTCTCAATTCTTCCAATAGTACATTTATTTACTGTGTTATGTGAAATGCCTCGAGTATTGATGACCGTGATATATTCAGTGGATAGAATAGGATGCCAATCTGGATTGCTGTATTCTTGTTAAGATTGCACTACTTAAGATATATTCTGTGATTTGCTTTGAATTATTTGTTTTCTGAGTAGGGCTAAGGCCAAAACTACTTGATGTTTAAAGCTTTTTTGTTGCCTCATGGTTAAATATTTACCTAAATTAATTCACATTTTACATTTTTTAAGTCATTTTTCTGACCTCTGCTGGGAATGTTTGCTGACCCAATGATGATATTGATTATTAGAATACTACTTCTATATCCATTCTTATCAAAATCGAAGCTTTAATGATTTAGATTCTCGTGAAAGTCGATATCATTCATATTGCTTGGGAATATCAGCCAGTATATCCTGGAAACAACTGATTTGTTAGTGAATTGATCTTTCATCTAATAGTCTGTAGGATTCAATGGCCAGTATTCAAATCATGTATTTTTTGGCTTTAATGATTTAGATTCTCGTGAAAGTTGATATCATTCATATTGCTTGGGAATATCAGCCAGTATATCCTGGAAACAACTGATTTGTTAGTGAATTGATCTTTCATCTAATAATCTGTAGGATTCAATGGCCAAGTTGGACTTTCTTTGTTAGTGATGGGGTTCCCTGCCAAAATGACTGCAATATTTGTATTAGATGCAATCTGTTTAATGATCTTTGGAGTTGGGAGATGTCCTTTTCTTTAAGTTGATGCGTGTTGAAAACTTAGTTTTGGATTACCTGATTACCTCTATATTTTGTTCCCAAAACTGATGCAGTTTATGACGTAACACGGCGAGAAACATTTACAAATCTCTCTGAAATATGGGCAAAGGAAATAGACCTTTATTCAACAAATCAAGACTGCATGAAGATGCTTGTTGGAAACAAAGTAGATAAGGTATTCCTTTAAGAATTTTATGTCAAATGCTATCTTGTAATATTGCCTTGTATTCAAATCATGTCAGTGAATATGTCTGAGTACAAAAATTTATCCATGTATTTTTTGGCTTGCCTTGTTCAAAATCTATGTCATTCCAGCGCTTTAAAGTTTTCTTCCTTATAGAGAACTTGGAATTCAATCGTTAGCAAATTTTGGTTAGATCAATAGTTTAAAATCCTTCTAAGTAAATCGCAGATCGCGGAAAATAGCGGTTTGTTCAGACAATTTATGTATTTTCATTTTAGAGAGTACTGCAGAGAAGGAGGGTGAGGCAGTTTTTGACACTTCTGCTTATTTAAGGTGTTTTTGGATGAAGTATAACACTGTAGTTTTTATTAGAAGTTTCTTCCCGTCCATCTGTTATGCAATTAAGTTGTTTTTCTAGTTTGCATTTGGTTACCAGCATGTTTCTGCAGGAGTTTCTTTTACATATGTAGAAGTTGGAGAGCTCGTTTGATCTTATGTACTTGTCTTTTCTTTCTTTTGTTTTGTGCTTTTGCTTCTGGTTCTTCTAGCATGATTGCTTATCCCTCCGGAAATGATAACTTTTAGGAAAAAAAAAAAATTGAATATCATTAGAGGAAAGTGCTTTTGCTTCTGGTTCTTCTAGCATGATTGCTTATCCCTCCGGAAATGATAAAGTTTAGGGAAAAAAAATTGAATATCATTAGAGGAAAGCGTATTAAACACTAAGTAAAAGAAGACAATGAAGAAGGTTTGTTTGCATCCTTTCATGTGGTATTTAATTTAAGTACATACAAATCATGAATTGCATGGACTCCATTTGGACTCTCAGTTTTACAATTCTAGCTTATATTGTTGAATGAGTCGAGTCAGCTGCACTGTTATCACATTTGTTTCTAGGTCTGACTTCTGCATTATATCAGAGCTTATTGCTGAAAGTTTTTTTTCTTGCCTTACATTATAGGATTTGACATGTGTTGGTTATATATGTTTGTGCTTGTATTTTCAGGAGGGTGATAGAGTTGTGACAAAGAAAGAGGGAATAGACTTTGCTAGGGAATATGGTTGCCTATTTATTGAATGCAGTGCTAAAACTCGAGTAAATGTGCAGCAATGCTTTGAAGAGCTTGTTTTGAAGGTACATTAACTGACATACATGCTGATTTACTAACCTTATTTTGGTCAGTAGGTGTGTGAAACGTAAATTCTCTTTGGGTGCAACCATGCATATTAGAAGGTGGAAATGTTTAATTGAAAGATGAGCCTGTGCAATTTCGGGAAAGGAGTGTTTTTCACACAAGTTCAATGGCTGACAATAAATGGATTGAGATACTAGTTTAATGCTTTATTTAATTTGTGATGAACAATGGCTGATGGTGACTGGGGATTTTTTTTTCTTTGGTTGCATGCAGGTTCTTGATACACCTAGCCTTTTAGCCGAGGGCTCTAAGGGAGTAAAAAAGAACATTTTTAAGGACAAACCTCAGTCTGATGCATCCACCAGCGGTTGTTGCTGAAGCTATTTCACTCAGAAGCAGCATTTCAAGAATCACGGTCTCCAAGAGAAGGGCATTGCATCCATTTTCATGGATTTCTAACATAATTTGCTGGTTATTTTAACATATGCAGAAGCCATTTCCAGTTTTCTAGGTTCCAACTTCCTGTTTTGTCTTGAATATGTAGATGTAATATAGTGACGGTCGTCTGCAATTTCTTGAAACTTCTTGTTTTTCTTTTAGTCACACATTAATTCCATGTGAAGACCTGTAAAGATGTGCTGAGTGTTGATGTTGCAGAGCTTGAGCAATAGTAAAAGCAAGCACTTAAGATAATCAAATAATAAGATTTGAACATATTGGACAAGTCTCTTGTCATCTTAATCTGTTGGAAAGTATCAAAAGAATGTTAACTAAATGACTATCATCTATCCAAGCCTGTTTCTAATATTTAGTTTGTGTATTTATTTACTCACACAATCACTTGTGAGAAGGGATAGAGCTTCTAATATTTTTCCAGTGCAGAGCTTTTTTATGATCCGTGTTTGAAGCCTGTACATTCCATTTTTCTTTTGTTCTTATTTATTTTGCTGCATCTGATTTGCAACAAATTGTTTTTTTGAAAAAACTAAACTAGCCCACCCAAATTGGCATTAGAGAGAATCGAAGCTGAGACCTCAAAGAGGAGCACACTTTCAGGTCCCAAGTCAATACCACCAGGTCAACCCAAGTAGGTTATTTGCAACAAATTTGTTGTTGTCTAATTGACACCAAATATTTCTTTATATGAGGCCTTAATTTTGAGCTGACATTATATTGATTTTTTTAATTTTTTTGAGAGGGTTTATTTTGATTGGTATTATACTCTACATAAACCTTATTTATTTTACTTCAAAAAAAAAACCTTATTTATTTATATACAAATAAATAAATTCTCCTAAAAAATACATAAAAAATATATTTTTTTTAAACGTACATCACAATCTAATTTTAAAATAAAAGTGATTGAATATACTGTTAAGTTAAATTAATCTAAAACGTCACTTTATCATGCAAAATACAAAATGCAATTTGAAGTATTCTGAAAAAATAAAAATAAAAGAAAGCATTGAATATTTGATAAGGAGGTAGAAAGCAAAATATCAGGAAGTGAAGTGAAAAGTATGGTAGGTGCATGCAGAGCAGTAGCAGCACCACCCATTTCCAATCTTCCATTGCGAAATCATAAAACCATCAGAATTCAGAATTCTTTTCATCAGAACAAAAGCAAAGCTTTCAGAGCTCAACTTTCAAATAGACGCTTGTTCCTTTTCTCTATTCCCCTCTCTAGTTTCCTTTTCATTCCTTTTCCTGCTTTTGGTGAAGGTGACAGTGTCATTTCACAAGAGTATGACCCAGTAACTCGTTCTGAAAGAGATGCAAGTGCTTTAATCTCACAAAGAGTTTCTCGTGGTGTTGAGTTGTTGGAGAAAGGTAGAGAGTTGCAGGCTCTTGGTGACTTCAATGGCGCTCTTCAATACTTTTCTCAGGTTACCCAATATCCTTTCATTAGGTTCTTGCTTGTTTATCTTCAATTTGGTAATGGATTATTGGATTGCTCTTGTTCATGTCTTTCGTTATTTGTTTTTTCTTTTTCCTTTTGTGACAAGACATGATATATGAATTGGCTTATTTGAGCTTATATACATGACATAAACACATGTGAGACTGTTTACGAGCTTGTGAAAACAACTTGTAGCTTATATGAAAAAATTGATTTGATTTCATCTAAAATAGACACTTATATGATACGCACTTATCCATCTAAGATTGAGATGTAGTAGATGTCACCATATCAATTTAGATTTTAGATTGCCATTGGCTTTTCCACCTTTACTGAGCAATCAATTAAGGGAAGTTTGGATATTCATCTTAGACACTTATCATACACGTTATTTCTATAATCCGAGAGATAAGGGTAAGCCTTAAATAGCCTATGATTGCAGGCCATTGGGGGAGCTTACATGAAAATATAAGATAAAAAAGTACTAGTTAAACTATCATAAGCTGTTTTTAGAAGTTCTTCCAAACACTCACACAAGTGTTTGGGTCATAAGATGAGCTCGAACAAACTCTCTTCCAAACACCCATTTTTAATAGAATCGCCCAAAAGTAAATGAATATTTGCTATCCTAGTTAAGTTTTACTGCTAGTATTACTAACCTACTGCTAAATTAATGTTTGAAGAGAAAAAATTACCCTCTTATTCTTCAACTCTGTTGGTTGTTTATCTGAGGCAAAGATGTCACACAATGGCTATATTGTGAGACAGTTATATGTAGAGTGTCATTCAAAGTTCATGCCAAGAATTGGGACTTTACTAGAGTTCAATTTCAAACAAATGTAATATTGTTCTGTCAATGTAAGAGTGTATTATTTTTTGGAATCACTAGAGATAACAGAAATATATAATTAAACCGACTTTAGAGGCCTTGTGATTTGGAAAGTTCTCAGAGGAATTTCCACTCATCCACCTTGCAACTTCATGTGGCTAAAATTAAGCCTTGCTCATACATTACTTCTCGGGTACGAAATGAGTGACGTCGAATAGGTTCATTTTGTATTTGGTGGCTCGACCTCATCTATTTCATGGCATAACATGTCACACTCTAACCATCAATAAGTTTATGTTCATATTCTAACATGCTACCTGTTTTTGTAGGTGATTGAAAGCTACAAAGACCTAGCATTCTCTGAGTATGCAAGGGTAGGGAGAGCACTAGCCCTATATGAAATTGGTGACAGAGAAGAAGCAATAGCAGAGATGGAAGACGTTTCAATATCACTAAAGGGGTATCCAGGTAAGTTCAATTTCATAGCACTTTCGCAATAAAATCACGCTGTAGAAGAAAAATTATCGCTTTTCTCTAATGCTATTTTTTCTCTCGAGCAGAAGTACATGCAGCTCTTGCAGCAGCCTTATATGCAGATAAGCATGCTGCGTTGCTTGCTGAAAACCAGTTTACAATTGCAACTCTTCTTGATCCTCATTTTACAGATCTTTCATATGTTAGAGACACAAAGCACTGGCCTCCAAGTTTGATTAGTTCTCTGCAGCATTTCATTACACTATCTTAA
Protein sequence

>MS.gene57390.t1

MDSSSGQQEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPSLLAEGSKGVKKNIFKDKPQSDASTSGDSVISQEYDPVTRSERDASALISQRVSRGVELLEKGRELQALGDFNGALQYFSQVIESYKDLAFSEYARVGRALALYEIGDREEAIAEMEDVSISLKGYPEVHAALAAALYADKHAALLAENQFTIATLLDPHFTDLSYVRDTKHWPPSLISSLQHFITLS