Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72353.t1 | XP_024638503.1 | 100 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 3.70E-107 | 397.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72353.t1 | Q05737 | 91.6 | 203 | 16 | 1 | 1 | 202 | 1 | 203 | 9.8e-101 | 367.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72353.t1 | I3SMC0 | 100.0 | 202 | 0 | 0 | 1 | 202 | 1 | 202 | 2.6e-107 | 397.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04918 | MS.gene72353 | 0.801258 | 9.80E-49 | -1.69E-46 |
MS.gene049283 | MS.gene72353 | 0.857967 | 1.14E-62 | -1.69E-46 |
MS.gene049411 | MS.gene72353 | 0.80425 | 2.36E-49 | -1.69E-46 |
MS.gene049983 | MS.gene72353 | 0.827204 | 1.78E-54 | -1.69E-46 |
MS.gene050085 | MS.gene72353 | 0.8007 | 1.27E-48 | -1.69E-46 |
MS.gene050213 | MS.gene72353 | 0.812095 | 5.04E-51 | -1.69E-46 |
MS.gene050359 | MS.gene72353 | 0.837232 | 5.87E-57 | -1.69E-46 |
MS.gene050384 | MS.gene72353 | 0.815287 | 9.99E-52 | -1.69E-46 |
MS.gene050386 | MS.gene72353 | 0.817809 | 2.72E-52 | -1.69E-46 |
MS.gene050414 | MS.gene72353 | 0.825443 | 4.67E-54 | -1.69E-46 |
MS.gene050646 | MS.gene72353 | 0.841655 | 4.17E-58 | -1.69E-46 |
MS.gene050654 | MS.gene72353 | 0.813947 | 1.98E-51 | -1.69E-46 |
MS.gene050689 | MS.gene72353 | 0.841917 | 3.55E-58 | -1.69E-46 |
MS.gene050752 | MS.gene72353 | 0.848257 | 6.88E-60 | -1.69E-46 |
MS.gene050838 | MS.gene72353 | 0.823661 | 1.23E-53 | -1.69E-46 |
MS.gene050931 | MS.gene72353 | 0.817835 | 2.68E-52 | -1.69E-46 |
MS.gene050945 | MS.gene72353 | 0.871674 | 5.71E-67 | -1.69E-46 |
MS.gene050955 | MS.gene72353 | 0.826179 | 3.13E-54 | -1.69E-46 |
MS.gene051003 | MS.gene72353 | 0.879738 | 9.75E-70 | -1.69E-46 |
MS.gene051043 | MS.gene72353 | 0.823383 | 1.43E-53 | -1.69E-46 |
MS.gene051226 | MS.gene72353 | 0.830141 | 3.47E-55 | -1.69E-46 |
MS.gene051233 | MS.gene72353 | 0.806917 | 6.52E-50 | -1.69E-46 |
MS.gene051234 | MS.gene72353 | 0.876913 | 9.56E-69 | -1.69E-46 |
MS.gene051343 | MS.gene72353 | 0.877785 | 4.76E-69 | -1.69E-46 |
MS.gene051381 | MS.gene72353 | 0.819997 | 8.66E-53 | -1.69E-46 |
MS.gene051699 | MS.gene72353 | 0.803008 | 4.28E-49 | -1.69E-46 |
MS.gene051975 | MS.gene72353 | 0.825573 | 4.36E-54 | -1.69E-46 |
MS.gene052016 | MS.gene72353 | 0.803487 | 3.41E-49 | -1.69E-46 |
MS.gene052072 | MS.gene72353 | 0.843916 | 1.04E-58 | -1.69E-46 |
MS.gene052296 | MS.gene72353 | 0.80211 | 6.55E-49 | -1.69E-46 |
MS.gene052307 | MS.gene72353 | 0.828143 | 1.06E-54 | -1.69E-46 |
MS.gene052342 | MS.gene72353 | 0.802363 | 5.81E-49 | -1.69E-46 |
MS.gene052533 | MS.gene72353 | 0.837631 | 4.64E-57 | -1.69E-46 |
MS.gene052609 | MS.gene72353 | 0.809328 | 2.00E-50 | -1.69E-46 |
MS.gene053058 | MS.gene72353 | 0.845364 | 4.25E-59 | -1.69E-46 |
MS.gene053079 | MS.gene72353 | 0.805916 | 1.06E-49 | -1.69E-46 |
MS.gene053143 | MS.gene72353 | 0.839792 | 1.28E-57 | -1.69E-46 |
MS.gene053228 | MS.gene72353 | 0.813568 | 2.40E-51 | -1.69E-46 |
MS.gene053564 | MS.gene72353 | 0.815624 | 8.40E-52 | -1.69E-46 |
MS.gene05364 | MS.gene72353 | 0.800564 | 1.36E-48 | -1.69E-46 |
MS.gene053931 | MS.gene72353 | 0.815074 | 1.11E-51 | -1.69E-46 |
MS.gene054004 | MS.gene72353 | 0.875454 | 3.04E-68 | -1.69E-46 |
MS.gene054005 | MS.gene72353 | 0.80943 | 1.90E-50 | -1.69E-46 |
MS.gene054178 | MS.gene72353 | 0.823153 | 1.61E-53 | -1.69E-46 |
MS.gene054403 | MS.gene72353 | 0.848667 | 5.29E-60 | -1.69E-46 |
MS.gene054413 | MS.gene72353 | 0.840404 | 8.87E-58 | -1.69E-46 |
MS.gene054892 | MS.gene72353 | 0.811613 | 6.41E-51 | -1.69E-46 |
MS.gene054893 | MS.gene72353 | 0.820296 | 7.39E-53 | -1.69E-46 |
MS.gene054957 | MS.gene72353 | 0.817684 | 2.90E-52 | -1.69E-46 |
MS.gene055513 | MS.gene72353 | 0.850502 | 1.63E-60 | -1.69E-46 |
MS.gene056097 | MS.gene72353 | 0.831726 | 1.42E-55 | -1.69E-46 |
MS.gene056181 | MS.gene72353 | 0.851933 | 6.43E-61 | -1.69E-46 |
MS.gene056578 | MS.gene72353 | 0.803472 | 3.43E-49 | -1.69E-46 |
MS.gene056699 | MS.gene72353 | 0.845803 | 3.23E-59 | -1.69E-46 |
MS.gene056831 | MS.gene72353 | 0.814731 | 1.33E-51 | -1.69E-46 |
MS.gene057034 | MS.gene72353 | 0.82221 | 2.68E-53 | -1.69E-46 |
MS.gene057102 | MS.gene72353 | 0.824534 | 7.66E-54 | -1.69E-46 |
MS.gene057622 | MS.gene72353 | 0.817066 | 4.00E-52 | -1.69E-46 |
MS.gene05781 | MS.gene72353 | 0.803297 | 3.73E-49 | -1.69E-46 |
MS.gene058095 | MS.gene72353 | 0.827556 | 1.47E-54 | -1.69E-46 |
MS.gene058149 | MS.gene72353 | 0.822031 | 2.94E-53 | -1.69E-46 |
MS.gene058261 | MS.gene72353 | 0.807812 | 4.21E-50 | -1.69E-46 |
MS.gene058592 | MS.gene72353 | 0.802584 | 5.23E-49 | -1.69E-46 |
MS.gene058976 | MS.gene72353 | 0.810122 | 1.35E-50 | -1.69E-46 |
MS.gene059007 | MS.gene72353 | 0.81699 | 4.16E-52 | -1.69E-46 |
MS.gene059146 | MS.gene72353 | 0.877509 | 5.94E-69 | -1.69E-46 |
MS.gene059778 | MS.gene72353 | 0.828141 | 1.06E-54 | -1.69E-46 |
MS.gene05985 | MS.gene72353 | -0.816917 | 4.32E-52 | -1.69E-46 |
MS.gene059901 | MS.gene72353 | -0.815216 | 1.04E-51 | -1.69E-46 |
MS.gene059965 | MS.gene72353 | 0.825731 | 3.99E-54 | -1.69E-46 |
MS.gene060244 | MS.gene72353 | 0.80871 | 2.71E-50 | -1.69E-46 |
MS.gene060522 | MS.gene72353 | 0.803012 | 4.27E-49 | -1.69E-46 |
MS.gene060933 | MS.gene72353 | 0.822515 | 2.27E-53 | -1.69E-46 |
MS.gene060935 | MS.gene72353 | 0.824099 | 9.70E-54 | -1.69E-46 |
MS.gene060937 | MS.gene72353 | 0.833394 | 5.47E-56 | -1.69E-46 |
MS.gene061100 | MS.gene72353 | 0.858775 | 6.54E-63 | -1.69E-46 |
MS.gene061160 | MS.gene72353 | 0.809024 | 2.32E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72353.t1 | MTR_7g081700 | 88.119 | 202 | 24 | 0 | 1 | 202 | 1 | 202 | 3.33e-137 | 382 |
MS.gene72353.t1 | MTR_8g006970 | 87.879 | 198 | 23 | 1 | 6 | 202 | 20 | 217 | 8.10e-130 | 364 |
MS.gene72353.t1 | MTR_4g099470 | 100.000 | 173 | 0 | 0 | 30 | 202 | 6 | 178 | 2.20e-128 | 358 |
MS.gene72353.t1 | MTR_2g005500 | 77.778 | 198 | 43 | 1 | 4 | 200 | 5 | 202 | 4.19e-116 | 328 |
MS.gene72353.t1 | MTR_8g006970 | 88.953 | 172 | 19 | 0 | 1 | 172 | 1 | 172 | 4.72e-114 | 323 |
MS.gene72353.t1 | MTR_1g115325 | 58.537 | 205 | 76 | 3 | 4 | 200 | 11 | 214 | 1.84e-85 | 251 |
MS.gene72353.t1 | MTR_1g068740 | 58.654 | 208 | 75 | 4 | 4 | 202 | 11 | 216 | 3.25e-85 | 251 |
MS.gene72353.t1 | MTR_7g100020 | 59.135 | 208 | 74 | 4 | 4 | 202 | 11 | 216 | 7.64e-85 | 250 |
MS.gene72353.t1 | MTR_1g068730 | 58.173 | 208 | 76 | 4 | 4 | 202 | 11 | 216 | 1.08e-84 | 249 |
MS.gene72353.t1 | MTR_4g063160 | 57.488 | 207 | 76 | 5 | 4 | 200 | 11 | 215 | 5.98e-81 | 240 |
MS.gene72353.t1 | MTR_2g005500 | 58.586 | 198 | 41 | 2 | 4 | 200 | 5 | 162 | 9.38e-77 | 228 |
MS.gene72353.t1 | MTR_2g096550 | 52.657 | 207 | 81 | 5 | 5 | 200 | 12 | 212 | 8.51e-72 | 217 |
MS.gene72353.t1 | MTR_1g068740 | 65.101 | 149 | 51 | 1 | 4 | 152 | 11 | 158 | 1.69e-68 | 208 |
MS.gene72353.t1 | MTR_1g068730 | 64.430 | 149 | 52 | 1 | 4 | 152 | 11 | 158 | 2.00e-67 | 204 |
MS.gene72353.t1 | MTR_4g064897 | 46.445 | 211 | 104 | 2 | 1 | 202 | 5 | 215 | 2.70e-66 | 203 |
MS.gene72353.t1 | MTR_2g005510 | 47.619 | 210 | 99 | 3 | 4 | 202 | 11 | 220 | 1.82e-63 | 196 |
MS.gene72353.t1 | MTR_2g027660 | 45.455 | 209 | 102 | 1 | 5 | 201 | 3 | 211 | 8.75e-62 | 191 |
MS.gene72353.t1 | MTR_6g021790 | 54.545 | 165 | 75 | 0 | 5 | 169 | 3 | 167 | 9.14e-62 | 191 |
MS.gene72353.t1 | MTR_3g069510 | 45.794 | 214 | 100 | 3 | 1 | 201 | 5 | 215 | 5.54e-61 | 189 |
MS.gene72353.t1 | MTR_2g075950 | 46.445 | 211 | 103 | 2 | 2 | 202 | 7 | 217 | 7.42e-61 | 189 |
MS.gene72353.t1 | MTR_8g031660 | 52.071 | 169 | 81 | 0 | 5 | 173 | 3 | 171 | 4.64e-60 | 187 |
MS.gene72353.t1 | MTR_8g093740 | 48.259 | 201 | 99 | 4 | 4 | 200 | 9 | 208 | 5.96e-60 | 186 |
MS.gene72353.t1 | MTR_4g088090 | 45.024 | 211 | 106 | 1 | 2 | 202 | 7 | 217 | 2.22e-59 | 185 |
MS.gene72353.t1 | MTR_2g014990 | 45.024 | 211 | 106 | 1 | 2 | 202 | 7 | 217 | 2.32e-59 | 185 |
MS.gene72353.t1 | MTR_7g051940 | 47.059 | 204 | 99 | 1 | 7 | 201 | 12 | 215 | 4.14e-59 | 184 |
MS.gene72353.t1 | MTR_1g078200 | 46.698 | 212 | 97 | 3 | 6 | 201 | 12 | 223 | 4.69e-59 | 185 |
MS.gene72353.t1 | MTR_3g086980 | 43.868 | 212 | 106 | 2 | 2 | 200 | 10 | 221 | 5.66e-59 | 184 |
MS.gene72353.t1 | MTR_8g089985 | 52.632 | 171 | 79 | 2 | 2 | 171 | 11 | 180 | 8.80e-59 | 184 |
MS.gene72353.t1 | MTR_7g103070 | 47.525 | 202 | 101 | 3 | 5 | 201 | 13 | 214 | 1.06e-58 | 184 |
MS.gene72353.t1 | MTR_4g079350 | 44.550 | 211 | 107 | 1 | 2 | 202 | 7 | 217 | 1.59e-58 | 183 |
MS.gene72353.t1 | MTR_2g090865 | 45.498 | 211 | 106 | 1 | 1 | 202 | 4 | 214 | 3.46e-58 | 182 |
MS.gene72353.t1 | MTR_8g031870 | 50.610 | 164 | 81 | 0 | 7 | 170 | 5 | 168 | 8.63e-58 | 180 |
MS.gene72353.t1 | MTR_2g083860 | 46.009 | 213 | 102 | 3 | 2 | 202 | 7 | 218 | 1.96e-57 | 181 |
MS.gene72353.t1 | MTR_1g029450 | 48.768 | 203 | 98 | 4 | 4 | 201 | 13 | 214 | 6.47e-57 | 179 |
MS.gene72353.t1 | MTR_8g027220 | 43.434 | 198 | 112 | 0 | 1 | 198 | 19 | 216 | 1.14e-56 | 179 |
MS.gene72353.t1 | MTR_3g096350 | 46.269 | 201 | 103 | 4 | 4 | 200 | 8 | 207 | 4.42e-56 | 177 |
MS.gene72353.t1 | MTR_1g062760 | 47.264 | 201 | 100 | 5 | 5 | 200 | 11 | 210 | 8.69e-56 | 176 |
MS.gene72353.t1 | MTR_0262s0050 | 43.128 | 211 | 108 | 2 | 2 | 200 | 9 | 219 | 6.34e-55 | 174 |
MS.gene72353.t1 | MTR_8g031680 | 48.485 | 165 | 85 | 0 | 5 | 169 | 3 | 167 | 1.51e-54 | 173 |
MS.gene72353.t1 | MTR_6g079550 | 48.925 | 186 | 93 | 2 | 1 | 185 | 5 | 189 | 2.70e-54 | 172 |
MS.gene72353.t1 | MTR_1g090717 | 47.549 | 204 | 103 | 4 | 2 | 201 | 9 | 212 | 5.53e-54 | 171 |
MS.gene72353.t1 | MTR_8g036220 | 47.368 | 171 | 90 | 0 | 6 | 176 | 14 | 184 | 1.03e-53 | 171 |
MS.gene72353.t1 | MTR_1g052475 | 48.810 | 168 | 86 | 0 | 2 | 169 | 9 | 176 | 1.34e-53 | 171 |
MS.gene72353.t1 | MTR_7g405790 | 47.126 | 174 | 92 | 0 | 7 | 180 | 14 | 187 | 3.37e-52 | 167 |
MS.gene72353.t1 | MTR_8g107070 | 54.706 | 170 | 75 | 2 | 1 | 169 | 7 | 175 | 5.36e-52 | 168 |
MS.gene72353.t1 | MTR_3g064390 | 44.103 | 195 | 100 | 4 | 10 | 201 | 12 | 200 | 7.76e-52 | 166 |
MS.gene72353.t1 | MTR_8g031830 | 46.591 | 176 | 90 | 1 | 7 | 178 | 5 | 180 | 1.84e-51 | 164 |
MS.gene72353.t1 | MTR_5g076590 | 42.268 | 194 | 105 | 3 | 10 | 201 | 12 | 200 | 3.03e-50 | 161 |
MS.gene72353.t1 | MTR_8g103550 | 41.237 | 194 | 106 | 3 | 10 | 201 | 11 | 198 | 1.20e-47 | 155 |
MS.gene72353.t1 | MTR_3g096350 | 54.225 | 142 | 59 | 4 | 4 | 143 | 8 | 145 | 3.97e-47 | 152 |
MS.gene72353.t1 | MTR_3g096350 | 57.778 | 135 | 50 | 4 | 4 | 136 | 8 | 137 | 6.09e-46 | 149 |
MS.gene72353.t1 | MTR_7g117910 | 47.552 | 143 | 74 | 1 | 6 | 148 | 18 | 159 | 5.04e-44 | 146 |
MS.gene72353.t1 | MTR_8g093740 | 44.118 | 170 | 91 | 3 | 35 | 200 | 6 | 175 | 5.83e-44 | 145 |
MS.gene72353.t1 | MTR_2g102060 | 38.974 | 195 | 111 | 3 | 10 | 202 | 12 | 200 | 2.43e-43 | 144 |
MS.gene72353.t1 | MTR_1g094220 | 42.236 | 161 | 92 | 1 | 10 | 169 | 33 | 193 | 3.64e-43 | 143 |
MS.gene72353.t1 | MTR_8g090215 | 37.056 | 197 | 120 | 1 | 9 | 201 | 10 | 206 | 7.30e-43 | 143 |
MS.gene72353.t1 | MTR_1g094220 | 43.506 | 154 | 86 | 1 | 10 | 162 | 33 | 186 | 1.46e-42 | 142 |
MS.gene72353.t1 | MTR_5g013900 | 36.735 | 196 | 119 | 1 | 9 | 199 | 10 | 205 | 1.52e-42 | 142 |
MS.gene72353.t1 | MTR_1g094220 | 43.506 | 154 | 86 | 1 | 10 | 162 | 33 | 186 | 1.64e-42 | 142 |
MS.gene72353.t1 | MTR_1g094220 | 43.506 | 154 | 86 | 1 | 10 | 162 | 33 | 186 | 4.66e-42 | 142 |
MS.gene72353.t1 | MTR_4g098950 | 39.752 | 161 | 97 | 0 | 9 | 169 | 10 | 170 | 1.30e-41 | 140 |
MS.gene72353.t1 | MTR_3g087160 | 41.615 | 161 | 94 | 0 | 9 | 169 | 10 | 170 | 2.22e-41 | 139 |
MS.gene72353.t1 | MTR_2g101890 | 38.308 | 201 | 113 | 5 | 8 | 200 | 10 | 207 | 5.78e-40 | 135 |
MS.gene72353.t1 | MTR_4g012940 | 38.308 | 201 | 113 | 5 | 8 | 200 | 8 | 205 | 2.38e-39 | 134 |
MS.gene72353.t1 | MTR_7g103070 | 45.098 | 153 | 79 | 3 | 54 | 201 | 6 | 158 | 8.77e-39 | 131 |
MS.gene72353.t1 | MTR_4g069850 | 40.476 | 168 | 93 | 3 | 8 | 168 | 8 | 175 | 4.36e-38 | 130 |
MS.gene72353.t1 | MTR_3g064390 | 45.669 | 127 | 69 | 0 | 10 | 136 | 12 | 138 | 9.78e-37 | 125 |
MS.gene72353.t1 | MTR_1g097420 | 37.952 | 166 | 96 | 3 | 8 | 166 | 8 | 173 | 6.76e-34 | 120 |
MS.gene72353.t1 | MTR_8g092020 | 36.747 | 166 | 98 | 2 | 8 | 166 | 12 | 177 | 7.33e-33 | 117 |
MS.gene72353.t1 | MTR_6g039490 | 34.804 | 204 | 113 | 6 | 8 | 199 | 8 | 203 | 6.75e-30 | 110 |
MS.gene72353.t1 | MTR_1g097420 | 35.119 | 168 | 100 | 4 | 6 | 166 | 35 | 200 | 4.96e-28 | 105 |
MS.gene72353.t1 | MTR_4g015220 | 55.696 | 79 | 35 | 0 | 122 | 200 | 2 | 80 | 1.86e-26 | 97.1 |
MS.gene72353.t1 | MTR_3g107707 | 30.435 | 184 | 119 | 4 | 9 | 188 | 14 | 192 | 2.55e-24 | 95.9 |
MS.gene72353.t1 | MTR_3g107713 | 30.435 | 184 | 119 | 4 | 9 | 188 | 14 | 192 | 2.58e-24 | 95.9 |
MS.gene72353.t1 | MTR_3g107717 | 30.435 | 184 | 119 | 4 | 9 | 188 | 14 | 192 | 2.75e-24 | 95.5 |
MS.gene72353.t1 | MTR_4g088055 | 31.361 | 169 | 102 | 5 | 8 | 164 | 6 | 172 | 6.37e-23 | 91.7 |
MS.gene72353.t1 | MTR_4g073250 | 31.737 | 167 | 100 | 5 | 8 | 162 | 6 | 170 | 8.67e-23 | 91.3 |
MS.gene72353.t1 | MTR_6g087980 | 31.737 | 167 | 100 | 5 | 8 | 162 | 6 | 170 | 1.08e-22 | 91.3 |
MS.gene72353.t1 | MTR_8g075240 | 31.953 | 169 | 101 | 5 | 8 | 164 | 6 | 172 | 3.09e-22 | 89.7 |
MS.gene72353.t1 | MTR_5g022600 | 31.361 | 169 | 102 | 5 | 8 | 164 | 6 | 172 | 1.57e-21 | 87.8 |
MS.gene72353.t1 | MTR_1g059590 | 36.416 | 173 | 100 | 4 | 5 | 177 | 395 | 557 | 2.32e-21 | 91.3 |
MS.gene72353.t1 | MTR_1g059590 | 36.416 | 173 | 100 | 4 | 5 | 177 | 428 | 590 | 2.82e-21 | 91.3 |
MS.gene72353.t1 | MTR_3g078260 | 30.220 | 182 | 108 | 6 | 8 | 177 | 8 | 182 | 4.57e-21 | 87.0 |
MS.gene72353.t1 | MTR_2g090875 | 29.586 | 169 | 105 | 5 | 8 | 164 | 6 | 172 | 8.60e-21 | 85.9 |
MS.gene72353.t1 | MTR_4g113620 | 30.000 | 170 | 97 | 5 | 9 | 173 | 14 | 166 | 2.78e-20 | 85.1 |
MS.gene72353.t1 | MTR_8g031810 | 39.048 | 105 | 50 | 1 | 7 | 111 | 5 | 95 | 2.98e-20 | 81.6 |
MS.gene72353.t1 | MTR_3g078260 | 33.621 | 116 | 74 | 3 | 8 | 122 | 8 | 121 | 1.78e-17 | 75.9 |
MS.gene72353.t1 | MTR_1452s0010 | 44.286 | 70 | 39 | 0 | 37 | 106 | 10 | 79 | 1.94e-16 | 72.0 |
MS.gene72353.t1 | MTR_5g078090 | 36.232 | 138 | 78 | 4 | 9 | 145 | 20 | 148 | 4.72e-15 | 70.5 |
MS.gene72353.t1 | MTR_1686s0010 | 40.000 | 70 | 42 | 0 | 37 | 106 | 10 | 79 | 1.22e-13 | 64.3 |
MS.gene72353.t1 | MTR_5g015370 | 28.994 | 169 | 110 | 5 | 9 | 172 | 20 | 183 | 1.88e-12 | 63.5 |
MS.gene72353.t1 | MTR_1g069245 | 41.026 | 78 | 45 | 1 | 37 | 114 | 122 | 198 | 7.67e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72353.t1 | AT5G47200 | 90.099 | 202 | 20 | 0 | 1 | 202 | 1 | 202 | 1.90e-139 | 387 |
MS.gene72353.t1 | AT4G17530 | 89.604 | 202 | 21 | 0 | 1 | 202 | 1 | 202 | 1.01e-138 | 386 |
MS.gene72353.t1 | AT1G02130 | 87.192 | 203 | 25 | 1 | 1 | 202 | 1 | 203 | 2.29e-134 | 375 |
MS.gene72353.t1 | AT3G11730 | 75.369 | 203 | 47 | 3 | 1 | 200 | 1 | 203 | 2.84e-114 | 324 |
MS.gene72353.t1 | AT5G59840 | 59.615 | 208 | 73 | 4 | 4 | 202 | 11 | 216 | 1.23e-86 | 254 |
MS.gene72353.t1 | AT3G46060 | 58.654 | 208 | 75 | 4 | 4 | 202 | 11 | 216 | 2.30e-85 | 251 |
MS.gene72353.t1 | AT3G46060 | 58.654 | 208 | 75 | 4 | 4 | 202 | 11 | 216 | 2.30e-85 | 251 |
MS.gene72353.t1 | AT3G46060 | 58.654 | 208 | 75 | 4 | 4 | 202 | 11 | 216 | 2.30e-85 | 251 |
MS.gene72353.t1 | AT3G53610 | 57.488 | 207 | 79 | 3 | 4 | 202 | 11 | 216 | 2.14e-84 | 249 |
MS.gene72353.t1 | AT3G53610 | 57.488 | 207 | 79 | 3 | 4 | 202 | 11 | 216 | 2.14e-84 | 249 |
MS.gene72353.t1 | AT3G53610 | 57.488 | 207 | 79 | 3 | 4 | 202 | 11 | 216 | 2.14e-84 | 249 |
MS.gene72353.t1 | AT3G09900 | 58.454 | 207 | 76 | 3 | 4 | 201 | 11 | 216 | 5.18e-82 | 243 |
MS.gene72353.t1 | AT5G03520 | 59.024 | 205 | 76 | 3 | 4 | 201 | 11 | 214 | 2.53e-81 | 241 |
MS.gene72353.t1 | AT4G17160 | 48.768 | 203 | 96 | 2 | 5 | 200 | 3 | 204 | 1.16e-65 | 201 |
MS.gene72353.t1 | AT1G07410 | 45.714 | 210 | 106 | 2 | 1 | 202 | 5 | 214 | 1.12e-64 | 199 |
MS.gene72353.t1 | AT5G47520 | 49.048 | 210 | 94 | 2 | 6 | 202 | 12 | 221 | 1.05e-63 | 196 |
MS.gene72353.t1 | AT4G35860 | 45.370 | 216 | 92 | 2 | 5 | 201 | 3 | 211 | 1.81e-63 | 196 |
MS.gene72353.t1 | AT1G09630 | 47.170 | 212 | 100 | 3 | 2 | 202 | 6 | 216 | 8.82e-63 | 194 |
MS.gene72353.t1 | AT4G17170 | 46.411 | 209 | 100 | 2 | 5 | 201 | 3 | 211 | 3.44e-62 | 192 |
MS.gene72353.t1 | AT5G45750 | 47.619 | 210 | 101 | 2 | 2 | 202 | 7 | 216 | 8.34e-62 | 191 |
MS.gene72353.t1 | AT3G46830 | 44.131 | 213 | 108 | 1 | 1 | 202 | 5 | 217 | 3.51e-61 | 190 |
MS.gene72353.t1 | AT3G46830 | 44.131 | 213 | 108 | 1 | 1 | 202 | 5 | 217 | 3.51e-61 | 190 |
MS.gene72353.t1 | AT3G15060 | 48.113 | 212 | 98 | 3 | 2 | 202 | 7 | 217 | 4.36e-61 | 190 |
MS.gene72353.t1 | AT5G03520 | 54.819 | 166 | 67 | 3 | 43 | 201 | 40 | 204 | 1.33e-60 | 188 |
MS.gene72353.t1 | AT5G60860 | 45.972 | 211 | 104 | 1 | 2 | 202 | 7 | 217 | 1.67e-60 | 188 |
MS.gene72353.t1 | AT1G28550 | 47.393 | 211 | 98 | 3 | 4 | 202 | 9 | 218 | 2.02e-60 | 188 |
MS.gene72353.t1 | AT4G18430 | 45.714 | 210 | 104 | 1 | 2 | 201 | 7 | 216 | 2.12e-60 | 188 |
MS.gene72353.t1 | AT3G07410 | 48.309 | 207 | 96 | 3 | 6 | 201 | 10 | 216 | 2.49e-60 | 188 |
MS.gene72353.t1 | AT5G59150 | 42.723 | 213 | 111 | 1 | 1 | 202 | 5 | 217 | 2.93e-60 | 187 |
MS.gene72353.t1 | AT1G16920 | 47.596 | 208 | 100 | 2 | 4 | 202 | 9 | 216 | 3.07e-60 | 187 |
MS.gene72353.t1 | AT1G06400 | 45.238 | 210 | 106 | 2 | 2 | 202 | 7 | 216 | 4.17e-60 | 187 |
MS.gene72353.t1 | AT4G39990 | 46.190 | 210 | 99 | 4 | 6 | 202 | 15 | 223 | 4.33e-60 | 187 |
MS.gene72353.t1 | AT2G33870 | 46.919 | 211 | 99 | 3 | 4 | 202 | 9 | 218 | 1.60e-59 | 186 |
MS.gene72353.t1 | AT5G47960 | 44.186 | 215 | 107 | 3 | 1 | 202 | 8 | 222 | 3.22e-59 | 185 |
MS.gene72353.t1 | AT5G65270 | 45.540 | 213 | 99 | 5 | 6 | 202 | 15 | 226 | 6.42e-59 | 184 |
MS.gene72353.t1 | AT4G18800 | 45.673 | 208 | 106 | 2 | 2 | 202 | 7 | 214 | 1.07e-58 | 184 |
MS.gene72353.t1 | AT1G05810 | 44.231 | 208 | 105 | 2 | 6 | 202 | 10 | 217 | 4.98e-56 | 177 |
MS.gene72353.t1 | AT1G43890 | 54.438 | 169 | 74 | 3 | 3 | 169 | 8 | 175 | 5.63e-56 | 177 |
MS.gene72353.t1 | AT1G43890 | 54.438 | 169 | 74 | 3 | 3 | 169 | 8 | 175 | 5.63e-56 | 177 |
MS.gene72353.t1 | AT1G43890 | 54.438 | 169 | 74 | 3 | 3 | 169 | 8 | 175 | 5.63e-56 | 177 |
MS.gene72353.t1 | AT1G05810 | 44.231 | 208 | 105 | 2 | 6 | 202 | 56 | 263 | 1.04e-55 | 177 |
MS.gene72353.t1 | AT5G03530 | 48.515 | 202 | 98 | 4 | 5 | 201 | 10 | 210 | 1.95e-55 | 175 |
MS.gene72353.t1 | AT5G03530 | 48.515 | 202 | 98 | 4 | 5 | 201 | 10 | 210 | 1.95e-55 | 175 |
MS.gene72353.t1 | AT2G43130 | 44.608 | 204 | 105 | 2 | 6 | 201 | 10 | 213 | 2.36e-55 | 175 |
MS.gene72353.t1 | AT3G12160 | 42.654 | 211 | 109 | 2 | 2 | 200 | 9 | 219 | 4.64e-55 | 174 |
MS.gene72353.t1 | AT1G18200 | 46.798 | 203 | 98 | 1 | 2 | 194 | 7 | 209 | 7.92e-55 | 174 |
MS.gene72353.t1 | AT1G73640 | 48.691 | 191 | 93 | 2 | 4 | 190 | 9 | 198 | 9.22e-54 | 172 |
MS.gene72353.t1 | AT2G31680 | 43.062 | 209 | 107 | 2 | 6 | 202 | 10 | 218 | 1.09e-53 | 171 |
MS.gene72353.t1 | AT1G01200 | 43.781 | 201 | 110 | 2 | 1 | 198 | 21 | 221 | 1.67e-51 | 166 |
MS.gene72353.t1 | AT4G19640 | 41.969 | 193 | 107 | 2 | 10 | 201 | 12 | 200 | 2.79e-48 | 157 |
MS.gene72353.t1 | AT5G45130 | 41.538 | 195 | 105 | 4 | 10 | 201 | 12 | 200 | 4.06e-46 | 151 |
MS.gene72353.t1 | AT3G54840 | 43.353 | 173 | 92 | 3 | 10 | 181 | 35 | 202 | 9.37e-45 | 147 |
MS.gene72353.t1 | AT3G09910 | 45.405 | 185 | 97 | 4 | 5 | 187 | 10 | 192 | 1.14e-44 | 147 |
MS.gene72353.t1 | AT3G09910 | 45.405 | 185 | 97 | 4 | 5 | 187 | 10 | 192 | 1.14e-44 | 147 |
MS.gene72353.t1 | AT5G45130 | 40.933 | 193 | 105 | 4 | 12 | 201 | 22 | 208 | 1.58e-44 | 147 |
MS.gene72353.t1 | AT2G44610 | 37.879 | 198 | 118 | 1 | 9 | 201 | 10 | 207 | 2.05e-44 | 147 |
MS.gene72353.t1 | AT3G09910 | 44.500 | 200 | 105 | 4 | 5 | 202 | 10 | 205 | 2.33e-44 | 147 |
MS.gene72353.t1 | AT3G09910 | 44.500 | 200 | 105 | 4 | 5 | 202 | 10 | 205 | 2.33e-44 | 147 |
MS.gene72353.t1 | AT3G09910 | 44.500 | 200 | 105 | 4 | 5 | 202 | 10 | 205 | 2.33e-44 | 147 |
MS.gene72353.t1 | AT3G54840 | 43.023 | 172 | 92 | 3 | 11 | 181 | 2 | 168 | 2.37e-44 | 145 |
MS.gene72353.t1 | AT3G54840 | 44.805 | 154 | 84 | 1 | 10 | 162 | 35 | 188 | 5.85e-44 | 145 |
MS.gene72353.t1 | AT4G35860 | 42.105 | 171 | 73 | 2 | 50 | 201 | 2 | 165 | 1.34e-42 | 141 |
MS.gene72353.t1 | AT2G22290 | 38.191 | 199 | 115 | 3 | 9 | 201 | 10 | 206 | 6.04e-42 | 140 |
MS.gene72353.t1 | AT5G10260 | 36.041 | 197 | 121 | 1 | 9 | 200 | 10 | 206 | 5.92e-41 | 138 |
MS.gene72353.t1 | AT1G52280 | 39.500 | 200 | 110 | 5 | 8 | 199 | 8 | 204 | 8.68e-41 | 137 |
MS.gene72353.t1 | AT4G39890 | 41.975 | 162 | 93 | 1 | 9 | 169 | 10 | 171 | 1.07e-40 | 137 |
MS.gene72353.t1 | AT5G59150 | 39.634 | 164 | 88 | 1 | 50 | 202 | 3 | 166 | 1.66e-40 | 135 |
MS.gene72353.t1 | AT3G18820 | 42.857 | 168 | 89 | 3 | 8 | 168 | 8 | 175 | 3.01e-40 | 136 |
MS.gene72353.t1 | AT3G16100 | 38.500 | 200 | 112 | 5 | 8 | 199 | 8 | 204 | 1.34e-39 | 134 |
MS.gene72353.t1 | AT5G64990 | 39.759 | 166 | 100 | 0 | 9 | 174 | 8 | 173 | 1.85e-38 | 132 |
MS.gene72353.t1 | AT4G19640 | 45.802 | 131 | 71 | 0 | 10 | 140 | 12 | 142 | 1.96e-37 | 129 |
MS.gene72353.t1 | AT1G49300 | 37.000 | 200 | 115 | 5 | 8 | 199 | 8 | 204 | 3.19e-37 | 129 |
MS.gene72353.t1 | AT1G49300 | 37.000 | 200 | 115 | 5 | 8 | 199 | 8 | 204 | 3.19e-37 | 129 |
MS.gene72353.t1 | AT2G21880 | 39.157 | 166 | 94 | 3 | 8 | 166 | 9 | 174 | 1.50e-36 | 127 |
MS.gene72353.t1 | AT4G19640 | 46.400 | 125 | 67 | 0 | 10 | 134 | 12 | 136 | 2.07e-36 | 124 |
MS.gene72353.t1 | AT5G64990 | 38.150 | 173 | 100 | 1 | 9 | 174 | 8 | 180 | 1.13e-35 | 125 |
MS.gene72353.t1 | AT1G22740 | 35.784 | 204 | 109 | 5 | 8 | 199 | 8 | 201 | 1.52e-35 | 124 |
MS.gene72353.t1 | AT4G09720 | 39.759 | 166 | 93 | 3 | 8 | 166 | 8 | 173 | 6.89e-34 | 120 |
MS.gene72353.t1 | AT4G09720 | 37.427 | 171 | 95 | 3 | 8 | 166 | 8 | 178 | 7.14e-32 | 115 |
MS.gene72353.t1 | AT5G39620 | 40.000 | 165 | 92 | 4 | 9 | 166 | 6 | 170 | 1.65e-31 | 114 |
MS.gene72353.t1 | AT4G09720 | 36.158 | 177 | 95 | 3 | 8 | 166 | 8 | 184 | 6.85e-31 | 112 |
MS.gene72353.t1 | AT2G21880 | 40.146 | 137 | 75 | 3 | 37 | 166 | 13 | 149 | 1.02e-28 | 106 |
MS.gene72353.t1 | AT2G21880 | 40.146 | 137 | 75 | 3 | 37 | 166 | 13 | 149 | 1.02e-28 | 106 |
MS.gene72353.t1 | AT2G21880 | 34.337 | 166 | 94 | 4 | 8 | 166 | 9 | 166 | 1.15e-26 | 101 |
MS.gene72353.t1 | AT4G09720 | 40.876 | 137 | 74 | 3 | 37 | 166 | 3 | 139 | 2.32e-26 | 99.8 |
MS.gene72353.t1 | AT4G09720 | 40.876 | 137 | 74 | 3 | 37 | 166 | 3 | 139 | 2.32e-26 | 99.8 |
MS.gene72353.t1 | AT4G09720 | 40.876 | 137 | 74 | 3 | 37 | 166 | 3 | 139 | 2.32e-26 | 99.8 |
MS.gene72353.t1 | AT2G44690 | 34.132 | 167 | 96 | 5 | 8 | 162 | 18 | 182 | 4.00e-25 | 97.8 |
MS.gene72353.t1 | AT4G35020 | 33.728 | 169 | 98 | 5 | 8 | 164 | 6 | 172 | 1.20e-24 | 96.3 |
MS.gene72353.t1 | AT4G35020 | 33.728 | 169 | 98 | 5 | 8 | 164 | 6 | 172 | 1.20e-24 | 96.3 |
MS.gene72353.t1 | AT4G35020 | 33.728 | 169 | 98 | 5 | 8 | 164 | 6 | 172 | 1.20e-24 | 96.3 |
MS.gene72353.t1 | AT5G55190 | 30.435 | 184 | 119 | 4 | 9 | 188 | 14 | 192 | 2.65e-24 | 95.9 |
MS.gene72353.t1 | AT4G28950 | 33.333 | 165 | 98 | 5 | 8 | 162 | 6 | 168 | 2.91e-24 | 95.5 |
MS.gene72353.t1 | AT5G20020 | 28.796 | 191 | 129 | 3 | 9 | 195 | 14 | 201 | 3.79e-24 | 95.5 |
MS.gene72353.t1 | AT5G55080 | 30.864 | 162 | 107 | 4 | 9 | 169 | 14 | 171 | 3.92e-24 | 95.5 |
MS.gene72353.t1 | AT5G20010 | 31.056 | 161 | 108 | 2 | 9 | 169 | 14 | 171 | 4.99e-24 | 95.1 |
MS.gene72353.t1 | AT3G51300 | 32.934 | 167 | 98 | 5 | 10 | 164 | 8 | 172 | 1.21e-23 | 93.6 |
MS.gene72353.t1 | AT1G75840 | 32.544 | 169 | 100 | 5 | 8 | 164 | 6 | 172 | 3.53e-23 | 92.0 |
MS.gene72353.t1 | AT2G17800 | 32.544 | 169 | 100 | 5 | 8 | 164 | 6 | 172 | 6.68e-23 | 91.7 |
MS.gene72353.t1 | AT2G17800 | 32.544 | 169 | 100 | 5 | 8 | 164 | 6 | 172 | 6.68e-23 | 91.7 |
MS.gene72353.t1 | AT4G35950 | 32.544 | 169 | 100 | 5 | 8 | 164 | 6 | 172 | 9.68e-23 | 91.3 |
MS.gene72353.t1 | AT5G45970 | 30.539 | 167 | 102 | 5 | 8 | 162 | 6 | 170 | 4.60e-22 | 89.4 |
MS.gene72353.t1 | AT5G46025 | 40.187 | 107 | 63 | 1 | 70 | 175 | 6 | 112 | 5.85e-22 | 86.7 |
MS.gene72353.t1 | AT1G20090 | 31.361 | 169 | 102 | 5 | 8 | 164 | 5 | 171 | 1.33e-21 | 88.2 |
MS.gene72353.t1 | AT3G48040 | 30.178 | 169 | 104 | 5 | 8 | 164 | 8 | 174 | 1.09e-20 | 85.9 |
MS.gene72353.t1 | AT5G62880 | 29.885 | 174 | 108 | 5 | 8 | 169 | 8 | 179 | 6.44e-20 | 84.0 |
MS.gene72353.t1 | AT3G48040 | 33.333 | 123 | 79 | 3 | 8 | 129 | 8 | 128 | 3.88e-19 | 81.3 |
MS.gene72353.t1 | AT5G62880 | 34.146 | 123 | 78 | 3 | 8 | 129 | 8 | 128 | 5.94e-19 | 80.9 |
MS.gene72353.t1 | AT4G35020 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.39e-18 | 78.2 |
MS.gene72353.t1 | AT4G35020 | 35.965 | 114 | 70 | 3 | 10 | 122 | 8 | 119 | 2.39e-18 | 78.2 |
MS.gene72353.t1 | AT5G67560 | 33.962 | 159 | 95 | 5 | 9 | 162 | 20 | 173 | 3.76e-14 | 68.2 |
MS.gene72353.t1 | AT5G37680 | 34.058 | 138 | 81 | 4 | 9 | 145 | 20 | 148 | 4.04e-14 | 68.2 |
MS.gene72353.t1 | AT3G49870 | 31.609 | 174 | 99 | 6 | 9 | 172 | 1 | 164 | 4.78e-14 | 67.4 |
MS.gene72353.t1 | AT3G51290 | 32.394 | 142 | 82 | 5 | 35 | 164 | 634 | 773 | 4.93e-14 | 70.5 |
MS.gene72353.t1 | AT3G49870 | 32.759 | 174 | 97 | 7 | 9 | 172 | 20 | 183 | 1.54e-13 | 66.2 |
MS.gene72353.t1 | AT3G22950 | 31.298 | 131 | 76 | 5 | 1 | 127 | 12 | 132 | 1.54e-11 | 60.8 |
MS.gene72353.t1 | AT3G22950 | 31.298 | 131 | 76 | 5 | 1 | 127 | 12 | 132 | 1.54e-11 | 60.8 |
MS.gene72353.t1 | AT3G49860 | 28.205 | 156 | 104 | 4 | 9 | 160 | 12 | 163 | 1.87e-11 | 60.5 |
MS.gene72353.t1 | AT5G37680 | 35.780 | 109 | 60 | 4 | 38 | 145 | 2 | 101 | 3.44e-11 | 58.9 |
Find 46 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTGGTTGTCCTCGAATT+TGG | 0.168291 | 8.3:+21195901 | None:intergenic |
ACTTACAATTTGAAGTTTAA+TGG | 0.206147 | 8.3:+21197092 | None:intergenic |
CCTCGAATTTGGACTGTTGC+AGG | 0.237144 | 8.3:+21195912 | None:intergenic |
CAGGCATTTGCAGATGAAAT+TGG | 0.240708 | 8.3:-21196192 | MS.gene72353:CDS |
CTGCTGGTCAAGAACGTTTC+CGG | 0.274066 | 8.3:-21196618 | MS.gene72353:CDS |
AGAGTTGAGACTTACTATTC+AGG | 0.317299 | 8.3:+21199352 | None:intergenic |
TGAAATTGGAATTCCTTTCA+TGG | 0.332549 | 8.3:-21196178 | MS.gene72353:CDS |
CAATGTGGAACAAGCTTTCA+TGG | 0.386569 | 8.3:-21196133 | MS.gene72353:CDS |
TAACATTGTTAAAGCTCTCT+TGG | 0.389666 | 8.3:+21196439 | None:intergenic |
ACGAGCAGCAACCAGCCTTC+TGG | 0.395079 | 8.3:+21195877 | None:intergenic |
GCAGGCCTGGCACTGTTGGC+AGG | 0.403801 | 8.3:+21195930 | None:intergenic |
AATTTGGACTGTTGCAGGCC+TGG | 0.409513 | 8.3:+21195917 | None:intergenic |
AATGTTAACAAGCTTCTAGT+TGG | 0.417837 | 8.3:-21196378 | MS.gene72353:CDS |
TGTTGCAGGCCTGGCACTGT+TGG | 0.432139 | 8.3:+21195926 | None:intergenic |
CAACCAGCCTTCTGGTTCAC+TGG | 0.436527 | 8.3:+21195885 | None:intergenic |
GAAAATCCGCACTGTTGAGC+AGG | 0.471772 | 8.3:-21197124 | MS.gene72353:CDS |
GTCAACCTGCCAACAGTGCC+AGG | 0.473985 | 8.3:-21195935 | MS.gene72353:CDS |
AGCTACTATCGTGGGGCTCA+TGG | 0.480037 | 8.3:-21196583 | MS.gene72353:CDS |
GAAAGCTTGTTCCACATTGG+AGG | 0.502915 | 8.3:+21196137 | None:intergenic |
TTGATTGGAGATTCTGGTGT+GGG | 0.506444 | 8.3:-21197793 | MS.gene72353:CDS |
ATTGTATAGTGGGACACTGC+TGG | 0.512939 | 8.3:-21196634 | MS.gene72353:intron |
TCCGCACTGTTGAGCAGGAT+GGG | 0.520866 | 8.3:-21197119 | MS.gene72353:CDS |
TTAGCACTAGTTTCCATGAA+AGG | 0.524383 | 8.3:+21196165 | None:intergenic |
ATCCGCACTGTTGAGCAGGA+TGG | 0.528930 | 8.3:-21197120 | MS.gene72353:CDS |
AATCACCTTTGCTGTTTCAG+AGG | 0.533991 | 8.3:+21196320 | None:intergenic |
AGTAGCTGCTAGTTATAGTC+CGG | 0.542099 | 8.3:+21196599 | None:intergenic |
TAACTAGCAGCTACTATCGT+GGG | 0.548282 | 8.3:-21196591 | MS.gene72353:CDS |
GACAGCTATATCAGTACCAT+CGG | 0.567693 | 8.3:-21197247 | MS.gene72353:CDS |
CAGAACTTACAGCAAACCTC+AGG | 0.568006 | 8.3:+21197755 | None:intergenic |
TGGAAACAAGAGCGATCTCT+CGG | 0.568213 | 8.3:-21196358 | MS.gene72353:CDS |
GCAAGTCATGTCTCCTCCTG+AGG | 0.576917 | 8.3:-21197771 | MS.gene72353:CDS |
TGGTACTGATATAGCTGTCA+AGG | 0.577148 | 8.3:+21197251 | None:intergenic |
CCTGCAACAGTCCAAATTCG+AGG | 0.584589 | 8.3:-21195912 | MS.gene72353:CDS |
CATGAAAGCTTGTTCCACAT+TGG | 0.594293 | 8.3:+21196134 | None:intergenic |
CAACCAGTGAACCAGAAGGC+TGG | 0.595916 | 8.3:-21195888 | MS.gene72353:CDS |
GGAACAAGCTTTCATGGCCA+TGG | 0.601950 | 8.3:-21196127 | MS.gene72353:CDS |
GTTGATTGGAGATTCTGGTG+TGG | 0.609925 | 8.3:-21197794 | MS.gene72353:CDS |
AACTTACAGCAAACCTCAGG+AGG | 0.618028 | 8.3:+21197758 | None:intergenic |
ATAACTAGCAGCTACTATCG+TGG | 0.626182 | 8.3:-21196592 | MS.gene72353:CDS |
GCTTACAAAGTCCACTCCGA+TGG | 0.633467 | 8.3:+21197231 | None:intergenic |
GCTTTAACAATGTTAAGCAG+TGG | 0.636327 | 8.3:-21196431 | MS.gene72353:CDS |
TGTGTCCTCTGAAACAGCAA+AGG | 0.645238 | 8.3:-21196325 | MS.gene72353:intron |
TCCCATCCTGCTCAACAGTG+CGG | 0.647894 | 8.3:+21197118 | None:intergenic |
AACTAGCAGCTACTATCGTG+GGG | 0.674225 | 8.3:-21196590 | MS.gene72353:CDS |
CTATATCAGTACCATCGGAG+TGG | 0.681244 | 8.3:-21197242 | MS.gene72353:CDS |
AGGACAACCAGTGAACCAGA+AGG | 0.685270 | 8.3:-21195892 | MS.gene72353:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAACAG+AGG | + | chr8.3:21197503-21197522 | None:intergenic | 10.0% |
!! | AAAATGTAATAGTAAAAAAT+GGG | + | chr8.3:21197586-21197605 | None:intergenic | 10.0% |
!!! | AAGAATCATAATTATTTTAT+GGG | + | chr8.3:21197224-21197243 | None:intergenic | 10.0% |
!!! | ATTAAAATTTAAAATAAGAC+AGG | + | chr8.3:21195965-21195984 | None:intergenic | 10.0% |
!! | ACATCAAAATATTAGATTAA+AGG | + | chr8.3:21199001-21199020 | None:intergenic | 15.0% |
!! | GAAAATGTAATAGTAAAAAA+TGG | + | chr8.3:21197587-21197606 | None:intergenic | 15.0% |
!! | TAGGTTTAAAAATTTATTAG+AGG | - | chr8.3:21196619-21196638 | MS.gene72353:CDS | 15.0% |
!!! | CAAGAATCATAATTATTTTA+TGG | + | chr8.3:21197225-21197244 | None:intergenic | 15.0% |
!!! | CTTTTTAAAAATTTTTTTGC+AGG | - | chr8.3:21198749-21198768 | MS.gene72353:intron | 15.0% |
!!! | TCATTTTCTCAAATTATTAT+CGG | + | chr8.3:21196354-21196373 | None:intergenic | 15.0% |
!!! | TTGTTTTATGATTGAATTTA+GGG | - | chr8.3:21196448-21196467 | MS.gene72353:CDS | 15.0% |
!!! | TTTTAAACCTATTAACTTTA+GGG | + | chr8.3:21196610-21196629 | None:intergenic | 15.0% |
!!! | TTTTTAAACCTATTAACTTT+AGG | + | chr8.3:21196611-21196630 | None:intergenic | 15.0% |
!! | AACATGGAAATAAGTTTAAA+TGG | + | chr8.3:21198037-21198056 | None:intergenic | 20.0% |
!! | AACTAAACATGATAACTAAA+CGG | + | chr8.3:21196166-21196185 | None:intergenic | 20.0% |
!! | AATAACATCATATCTTTGAT+TGG | - | chr8.3:21197371-21197390 | MS.gene72353:intron | 20.0% |
!! | ACTTCATAAAATATCATTCA+AGG | + | chr8.3:21197906-21197925 | None:intergenic | 20.0% |
!! | AGTTGAATATAAAGAACATA+TGG | - | chr8.3:21197613-21197632 | MS.gene72353:intron | 20.0% |
!! | ATAACATCATATCTTTGATT+GGG | - | chr8.3:21197372-21197391 | MS.gene72353:intron | 20.0% |
!! | ATAAGTTTAAATGGTAGATA+TGG | + | chr8.3:21198028-21198047 | None:intergenic | 20.0% |
!! | CAAAATATTAGATTAAAGGA+AGG | + | chr8.3:21198997-21199016 | None:intergenic | 20.0% |
!! | GTAATTATTATATGTCCATT+TGG | - | chr8.3:21198380-21198399 | MS.gene72353:intron | 20.0% |
!! | TATGTTAAAAAATGTTGTAC+AGG | - | chr8.3:21196758-21196777 | MS.gene72353:intron | 20.0% |
!! | TGGTATATCCTTATAAAATA+AGG | - | chr8.3:21197027-21197046 | MS.gene72353:intron | 20.0% |
!! | TTCTTAAAATTGATACACAT+GGG | - | chr8.3:21196310-21196329 | MS.gene72353:intron | 20.0% |
!! | TTGATTTCCTAATATTCAAT+GGG | + | chr8.3:21198488-21198507 | None:intergenic | 20.0% |
!! | TTTAGATGTAGAAAACAAAT+TGG | + | chr8.3:21198251-21198270 | None:intergenic | 20.0% |
!! | TTTCTTAAAATTGATACACA+TGG | - | chr8.3:21196309-21196328 | MS.gene72353:intron | 20.0% |
!!! | AACATTCTCCTTATTTTATA+AGG | + | chr8.3:21197038-21197057 | None:intergenic | 20.0% |
!!! | ACTTACAATTTGAAGTTTAA+TGG | + | chr8.3:21198141-21198160 | None:intergenic | 20.0% |
!!! | ATTGATTTCCTAATATTCAA+TGG | + | chr8.3:21198489-21198508 | None:intergenic | 20.0% |
!!! | GCATTTTTTTATTGTATAGT+GGG | - | chr8.3:21198586-21198605 | MS.gene72353:intron | 20.0% |
!!! | GTTGTTTTATGATTGAATTT+AGG | - | chr8.3:21196447-21196466 | MS.gene72353:CDS | 20.0% |
!!! | TGCATTTTTTTATTGTATAG+TGG | - | chr8.3:21198585-21198604 | MS.gene72353:intron | 20.0% |
!!! | TTGAATGATATTTTATGAAG+TGG | - | chr8.3:21197905-21197924 | MS.gene72353:intron | 20.0% |
!!! | TTTAAATCGAAATTTTGTCT+TGG | + | chr8.3:21197161-21197180 | None:intergenic | 20.0% |
!!! | TTTACTTTTTATCTTATGCA+TGG | - | chr8.3:21196064-21196083 | MS.gene72353:intron | 20.0% |
!!! | TTTTTTTCCTTCTTTAGTTA+TGG | - | chr8.3:21197521-21197540 | MS.gene72353:intron | 20.0% |
! | AAAACAACACTTATGAATGA+AGG | + | chr8.3:21196435-21196454 | None:intergenic | 25.0% |
! | AAAGTTACCCATTGAATATT+AGG | - | chr8.3:21198478-21198497 | MS.gene72353:intron | 25.0% |
! | AATACTGAACAAGTTGTTAT+TGG | - | chr8.3:21198185-21198204 | MS.gene72353:intron | 25.0% |
! | AATCAATTTCTTGTCTTCAT+TGG | - | chr8.3:21197007-21197026 | MS.gene72353:intron | 25.0% |
! | ATAGTCACTGAAAATAAGAT+AGG | + | chr8.3:21197402-21197421 | None:intergenic | 25.0% |
! | ATTATAGACTAGAACTCATT+TGG | - | chr8.3:21197285-21197304 | MS.gene72353:intron | 25.0% |
! | CATATTCATTGATCTATCTA+TGG | + | chr8.3:21196563-21196582 | None:intergenic | 25.0% |
! | CATTTGAACAGTATTATTTG+AGG | - | chr8.3:21198451-21198470 | MS.gene72353:intron | 25.0% |
! | GTAAATGAGGTTAATAATCA+AGG | + | chr8.3:21199243-21199262 | None:intergenic | 25.0% |
! | TAAATGATGTCCTATATATG+TGG | - | chr8.3:21196859-21196878 | MS.gene72353:intron | 25.0% |
! | TAACATCATATCTTTGATTG+GGG | - | chr8.3:21197373-21197392 | MS.gene72353:intron | 25.0% |
! | TACTAAAGTTGAAAACAACA+TGG | + | chr8.3:21198053-21198072 | None:intergenic | 25.0% |
! | TATGGAATTTCTGTATGTAA+AGG | - | chr8.3:21199146-21199165 | MS.gene72353:intron | 25.0% |
! | TTATAGACTAGAACTCATTT+GGG | - | chr8.3:21197286-21197305 | MS.gene72353:intron | 25.0% |
! | TTATATGTCCATTTGGTAAA+TGG | - | chr8.3:21198387-21198406 | MS.gene72353:intron | 25.0% |
!! | AAATGAGTTCTAGTCTATAA+TGG | + | chr8.3:21197286-21197305 | None:intergenic | 25.0% |
!! | AATGATATTTTATGAAGTGG+AGG | - | chr8.3:21197908-21197927 | MS.gene72353:intron | 25.0% |
!! | AATTGTGAGTCTTTTTAAAC+CGG | - | chr8.3:21198673-21198692 | MS.gene72353:intron | 25.0% |
!! | AATTTCCTTTTCAAACACTT+CGG | - | chr8.3:21198506-21198525 | MS.gene72353:intron | 25.0% |
!! | AGAGATGTTCAATTTTCATA+AGG | - | chr8.3:21196238-21196257 | MS.gene72353:intron | 25.0% |
!! | ATTCTCTTTAGGAAAAAGAT+AGG | - | chr8.3:21197340-21197359 | MS.gene72353:intron | 25.0% |
!! | ATTGGCAAGCTTTTATAAAA+AGG | - | chr8.3:21197094-21197113 | MS.gene72353:intron | 25.0% |
!! | ATTTCCTTTTTACATTGTCT+TGG | - | chr8.3:21198709-21198728 | MS.gene72353:intron | 25.0% |
!! | TATCTTTTTCCTAAAGAGAA+TGG | + | chr8.3:21197341-21197360 | None:intergenic | 25.0% |
!! | TTATAAAAGCTTGCCAATTT+TGG | + | chr8.3:21197092-21197111 | None:intergenic | 25.0% |
!! | TTTCCTTTTTACATTGTCTT+GGG | - | chr8.3:21198710-21198729 | MS.gene72353:intron | 25.0% |
!! | TTTTTAACATATATCCCACA+TGG | + | chr8.3:21196749-21196768 | None:intergenic | 25.0% |
!! | TTTTTCTTTTTCTGTGAAAC+AGG | - | chr8.3:21197946-21197965 | MS.gene72353:intron | 25.0% |
!!! | AGGAAAGAATTAATTTGTGA+CGG | + | chr8.3:21195945-21195964 | None:intergenic | 25.0% |
AAAAAAAATGTCACTGGAAG+TGG | + | chr8.3:21198970-21198989 | None:intergenic | 30.0% | |
AAAAAAATGTCACTGGAAGT+GGG | + | chr8.3:21198969-21198988 | None:intergenic | 30.0% | |
AAAAAATGTTGTACAGGTCA+TGG | - | chr8.3:21196764-21196783 | MS.gene72353:intron | 30.0% | |
AAAAAGGAAATTGCTGACAA+AGG | + | chr8.3:21198700-21198719 | None:intergenic | 30.0% | |
AAAAATGTTGTACAGGTCAT+GGG | - | chr8.3:21196765-21196784 | MS.gene72353:intron | 30.0% | |
AAAAGGAAATTGCTGACAAA+GGG | + | chr8.3:21198699-21198718 | None:intergenic | 30.0% | |
AAATGATCCAAGAACACAAT+TGG | + | chr8.3:21198436-21198455 | None:intergenic | 30.0% | |
AAGATGACCATAACTAAAGA+AGG | + | chr8.3:21197531-21197550 | None:intergenic | 30.0% | |
AATGTTAACAAGCTTCTAGT+TGG | - | chr8.3:21198852-21198871 | MS.gene72353:intron | 30.0% | |
ATGATGTCTTGAGTAAAATG+TGG | - | chr8.3:21196580-21196599 | MS.gene72353:CDS | 30.0% | |
ATTGGTTAAGCAACCAAAAT+TGG | - | chr8.3:21197076-21197095 | MS.gene72353:intron | 30.0% | |
GCTGAAATTAAAAACAGGTA+TGG | - | chr8.3:21199128-21199147 | MS.gene72353:intron | 30.0% | |
GGACTTAAAAAAAATGTCAC+TGG | + | chr8.3:21198976-21198995 | None:intergenic | 30.0% | |
TAAAATTGATACACATGGGA+TGG | - | chr8.3:21196314-21196333 | MS.gene72353:intron | 30.0% | |
TAACATTGTTAAAGCTCTCT+TGG | + | chr8.3:21198794-21198813 | None:intergenic | 30.0% | |
TCCTCAAATAAAACTTCTCA+TGG | + | chr8.3:21198341-21198360 | None:intergenic | 30.0% | |
TCTTGACCATAAACAATGTA+AGG | - | chr8.3:21197727-21197746 | MS.gene72353:intron | 30.0% | |
TGAAATTGGAATTCCTTTCA+TGG | - | chr8.3:21199052-21199071 | MS.gene72353:intron | 30.0% | |
TTTCCCAAGACAATGTAAAA+AGG | + | chr8.3:21198716-21198735 | None:intergenic | 30.0% | |
! | AATTGGTAACTGGAAAAACT+TGG | + | chr8.3:21198419-21198438 | None:intergenic | 30.0% |
! | CAGTATCTATTGACTAAACA+AGG | + | chr8.3:21199215-21199234 | None:intergenic | 30.0% |
! | GAAATACTTTTGTCCATTAG+AGG | + | chr8.3:21196708-21196727 | None:intergenic | 30.0% |
! | GAACATATGGATGTGTTTTT+AGG | - | chr8.3:21197626-21197645 | MS.gene72353:intron | 30.0% |
! | GTCTTTTGTAATCTTGTACT+GGG | - | chr8.3:21196678-21196697 | MS.gene72353:intron | 30.0% |
! | TAAACCTATTAACTTTAGGG+AGG | + | chr8.3:21196607-21196626 | None:intergenic | 30.0% |
! | TAACATTTTCACTTGCATAG+CGG | + | chr8.3:21198839-21198858 | None:intergenic | 30.0% |
! | TCTTTTGTAATCTTGTACTG+GGG | - | chr8.3:21196679-21196698 | MS.gene72353:intron | 30.0% |
! | TGGATTGTGAAATTTGTTCA+TGG | - | chr8.3:21196084-21196103 | MS.gene72353:intron | 30.0% |
! | TGTCTTTTGTAATCTTGTAC+TGG | - | chr8.3:21196677-21196696 | MS.gene72353:intron | 30.0% |
! | TTGATTATGTGATCCACTTT+TGG | - | chr8.3:21196210-21196229 | MS.gene72353:intron | 30.0% |
! | TTGTTCAAGCTTTTGTTGAT+TGG | - | chr8.3:21197422-21197441 | MS.gene72353:intron | 30.0% |
!! | ATTTTCTAAAGAAGGAAGCA+TGG | + | chr8.3:21198092-21198111 | None:intergenic | 30.0% |
!! | GGAAAGAATTAATTTGTGAC+GGG | + | chr8.3:21195944-21195963 | None:intergenic | 30.0% |
!! | TCTATAGTTTGTTTCTTCCA+CGG | - | chr8.3:21196502-21196521 | MS.gene72353:intron | 30.0% |
!! | TTAATTTGTGACGGGAAATT+TGG | + | chr8.3:21195936-21195955 | None:intergenic | 30.0% |
!!! | GTCATTTTTATGTGAGAAGA+AGG | + | chr8.3:21197837-21197856 | None:intergenic | 30.0% |
!!! | TCCATGAGAAGTTTTATTTG+AGG | - | chr8.3:21198337-21198356 | MS.gene72353:intron | 30.0% |
ACATCTCTTGAAACCAAAAG+TGG | + | chr8.3:21196226-21196245 | None:intergenic | 35.0% | |
ACATTGTCTTGGGAAAACAA+TGG | - | chr8.3:21198720-21198739 | MS.gene72353:intron | 35.0% | |
AGAGTTGAGACTTACTATTC+AGG | + | chr8.3:21195881-21195900 | None:intergenic | 35.0% | |
AGATCCGTTTAATTAGTCGA+TGG | - | chr8.3:21196138-21196157 | MS.gene72353:CDS | 35.0% | |
ATGTACGATGCCACATATAT+AGG | + | chr8.3:21196872-21196891 | None:intergenic | 35.0% | |
CCATAAACAATGTAAGGTCA+AGG | - | chr8.3:21197733-21197752 | MS.gene72353:intron | 35.0% | |
CCTTGACCTTACATTGTTTA+TGG | + | chr8.3:21197736-21197755 | None:intergenic | 35.0% | |
CTATTTGTGGTTTGATCGAA+CGG | - | chr8.3:21197800-21197819 | MS.gene72353:CDS | 35.0% | |
GCAAAACATGACTGTCTAAA+AGG | + | chr8.3:21196901-21196920 | None:intergenic | 35.0% | |
GCTTTAACAATGTTAAGCAG+TGG | - | chr8.3:21198799-21198818 | MS.gene72353:intron | 35.0% | |
GTAAATGCATGTGAACTCTA+AGG | - | chr8.3:21196260-21196279 | MS.gene72353:intron | 35.0% | |
TAAACGGATCTAAATCAGCA+AGG | + | chr8.3:21196129-21196148 | None:intergenic | 35.0% | |
TATATGCACCAGAGAGTAAA+AGG | - | chr8.3:21197698-21197717 | MS.gene72353:intron | 35.0% | |
TGCATGACTTCAATCAATCT+AGG | - | chr8.3:21196820-21196839 | MS.gene72353:intron | 35.0% | |
TGGCTGCTGAAATTAAAAAC+AGG | - | chr8.3:21199123-21199142 | MS.gene72353:intron | 35.0% | |
! | CCATTCTGTGAAAAAAGTAC+CGG | + | chr8.3:21199272-21199291 | None:intergenic | 35.0% |
! | GATTTACTCCTTTTACTCTC+TGG | + | chr8.3:21197709-21197728 | None:intergenic | 35.0% |
! | GGATCCATCGACTAATTAAA+CGG | + | chr8.3:21196145-21196164 | None:intergenic | 35.0% |
! | TTAGCACTAGTTTCCATGAA+AGG | + | chr8.3:21199068-21199087 | None:intergenic | 35.0% |
!! | AGGCATTGAAAAAGTGTGTA+TGG | - | chr8.3:21197646-21197665 | MS.gene72353:intron | 35.0% |
!! | CTCTGAGTTGAAAAAGCATT+CGG | + | chr8.3:21196479-21196498 | None:intergenic | 35.0% |
!! | CTTTTGTTGATTGGAGATTC+TGG | - | chr8.3:21197431-21197450 | MS.gene72353:intron | 35.0% |
!! | TATTGGTTCTGAACTCTGAT+GGG | - | chr8.3:21198202-21198221 | MS.gene72353:intron | 35.0% |
!! | TTATTGGTTCTGAACTCTGA+TGG | - | chr8.3:21198201-21198220 | MS.gene72353:intron | 35.0% |
!!! | GTTTTTAATTTCAGCAGCCA+TGG | + | chr8.3:21199123-21199142 | None:intergenic | 35.0% |
AAAGCTAGTGAAGTCCATGT+GGG | - | chr8.3:21196732-21196751 | MS.gene72353:intron | 40.0% | |
AACACTTCGGCTCAATTATC+TGG | - | chr8.3:21198519-21198538 | MS.gene72353:intron | 40.0% | |
ACACTTCGGCTCAATTATCT+GGG | - | chr8.3:21198520-21198539 | MS.gene72353:intron | 40.0% | |
AGAGAATGGCCATAGCAAAA+TGG | + | chr8.3:21197327-21197346 | None:intergenic | 40.0% | |
AGTAGCTGCTAGTTATAGTC+CGG | + | chr8.3:21198634-21198653 | None:intergenic | 40.0% | |
ATAACTAGCAGCTACTATCG+TGG | - | chr8.3:21198638-21198657 | MS.gene72353:intron | 40.0% | |
CAATGTGGAACAAGCTTTCA+TGG | - | chr8.3:21199097-21199116 | MS.gene72353:intron | 40.0% | |
CAGAGTCACATCTCTATTTG+TGG | - | chr8.3:21197787-21197806 | MS.gene72353:CDS | 40.0% | |
CAGGCATTTGCAGATGAAAT+TGG | - | chr8.3:21199038-21199057 | MS.gene72353:intron | 40.0% | |
CCAGTTACCAATTGTGTTCT+TGG | - | chr8.3:21198426-21198445 | MS.gene72353:intron | 40.0% | |
GACAGCTATATCAGTACCAT+CGG | - | chr8.3:21197983-21198002 | MS.gene72353:intron | 40.0% | |
GAGAATGGCCATAGCAAAAT+GGG | + | chr8.3:21197326-21197345 | None:intergenic | 40.0% | |
GATAATGTAATCACGTGTGC+CGG | - | chr8.3:21196374-21196393 | MS.gene72353:CDS | 40.0% | |
GCAAATGCCTGATGTACAAA+AGG | + | chr8.3:21199029-21199048 | None:intergenic | 40.0% | |
GGAATGAGCCATTTACCAAA+TGG | + | chr8.3:21198398-21198417 | None:intergenic | 40.0% | |
TAAAGCTAGTGAAGTCCATG+TGG | - | chr8.3:21196731-21196750 | MS.gene72353:intron | 40.0% | |
TAACTAGCAGCTACTATCGT+GGG | - | chr8.3:21198639-21198658 | MS.gene72353:intron | 40.0% | |
TACATAGTGAGATTGTGAGC+AGG | - | chr8.3:21197674-21197693 | MS.gene72353:intron | 40.0% | |
TGCGCAGATCTAACTAAACA+AGG | + | chr8.3:21196001-21196020 | None:intergenic | 40.0% | |
TGCTAAAAATGCCTCCAATG+TGG | - | chr8.3:21199082-21199101 | MS.gene72353:intron | 40.0% | |
TGGAAGTGGGACATGTATAT+GGG | + | chr8.3:21198956-21198975 | None:intergenic | 40.0% | |
TGGTCCTCCCTAAAGTTAAT+AGG | - | chr8.3:21196600-21196619 | MS.gene72353:CDS | 40.0% | |
TTGATTGGAGATTCTGGTGT+GGG | - | chr8.3:21197437-21197456 | MS.gene72353:intron | 40.0% | |
TTGCTATGGCCATTCTCTTT+AGG | - | chr8.3:21197329-21197348 | MS.gene72353:intron | 40.0% | |
! | CATGAAAGCTTGTTCCACAT+TGG | + | chr8.3:21199099-21199118 | None:intergenic | 40.0% |
! | CCAAGAACACAATTGGTAAC+TGG | + | chr8.3:21198429-21198448 | None:intergenic | 40.0% |
! | CTTATGAATGAAGGTGTGTC+TGG | + | chr8.3:21196426-21196445 | None:intergenic | 40.0% |
! | GTTTGTGCCTTTTGTACATC+AGG | - | chr8.3:21199019-21199038 | MS.gene72353:intron | 40.0% |
! | TTCTTCCACGGTTGGTATAA+GGG | - | chr8.3:21196514-21196533 | MS.gene72353:intron | 40.0% |
! | TTGAGCCGAAGTGTTTGAAA+AGG | + | chr8.3:21198514-21198533 | None:intergenic | 40.0% |
! | TTTCTTCCACGGTTGGTATA+AGG | - | chr8.3:21196513-21196532 | MS.gene72353:intron | 40.0% |
!! | AATCACCTTTGCTGTTTCAG+AGG | + | chr8.3:21198913-21198932 | None:intergenic | 40.0% |
!! | CAGTGCGGATTTTCTAAAGA+AGG | + | chr8.3:21198100-21198119 | None:intergenic | 40.0% |
!! | GGAGAAGTGTTAAGCAGAAA+AGG | + | chr8.3:21195915-21195934 | None:intergenic | 40.0% |
!! | TAGTTTGTTTCTTCCACGGT+TGG | - | chr8.3:21196506-21196525 | MS.gene72353:intron | 40.0% |
!! | TCATGTTTTGCTGTCTACTG+TGG | - | chr8.3:21196910-21196929 | MS.gene72353:intron | 40.0% |
!! | TGGTACTGATATAGCTGTCA+AGG | + | chr8.3:21197982-21198001 | None:intergenic | 40.0% |
!!! | CCGGTACTTTTTTCACAGAA+TGG | - | chr8.3:21199269-21199288 | MS.gene72353:intron | 40.0% |
AACTAGCAGCTACTATCGTG+GGG | - | chr8.3:21198640-21198659 | MS.gene72353:intron | 45.0% | |
AACTTACAGCAAACCTCAGG+AGG | + | chr8.3:21197475-21197494 | None:intergenic | 45.0% | |
ACTCTCTCACTTGACAGTCA+AGG | - | chr8.3:21197855-21197874 | MS.gene72353:intron | 45.0% | |
AGATTGCTTAACTAGTGCCC+CGG | - | chr8.3:21197180-21197199 | MS.gene72353:intron | 45.0% | |
CAAAATGGGTGACTGTGACA+TGG | + | chr8.3:21197312-21197331 | None:intergenic | 45.0% | |
CAGAACTTACAGCAAACCTC+AGG | + | chr8.3:21197478-21197497 | None:intergenic | 45.0% | |
CTATATCAGTACCATCGGAG+TGG | - | chr8.3:21197988-21198007 | MS.gene72353:intron | 45.0% | |
CTGGAAGTGGGACATGTATA+TGG | + | chr8.3:21198957-21198976 | None:intergenic | 45.0% | |
GGAAGTGGGACATGTATATG+GGG | + | chr8.3:21198955-21198974 | None:intergenic | 45.0% | |
GTTGATTGGAGATTCTGGTG+TGG | - | chr8.3:21197436-21197455 | MS.gene72353:intron | 45.0% | |
TAACCTCATTTACTCGTCGC+CGG | - | chr8.3:21199250-21199269 | MS.gene72353:intron | 45.0% | |
TGGAAACAAGAGCGATCTCT+CGG | - | chr8.3:21198872-21198891 | MS.gene72353:intron | 45.0% | |
TGTACTGGGGAATCCTCTAA+TGG | - | chr8.3:21196692-21196711 | MS.gene72353:intron | 45.0% | |
! | ATTGTATAGTGGGACACTGC+TGG | - | chr8.3:21198596-21198615 | MS.gene72353:intron | 45.0% |
! | CACAGTCACCCATTTTGCTA+TGG | - | chr8.3:21197315-21197334 | MS.gene72353:intron | 45.0% |
! | GAAAGCTTGTTCCACATTGG+AGG | + | chr8.3:21199096-21199115 | None:intergenic | 45.0% |
! | TCACTGGTTGTCCTCGAATT+TGG | + | chr8.3:21199332-21199351 | None:intergenic | 45.0% |
! | TCGGCTCAATTATCTGGGAT+TGG | - | chr8.3:21198525-21198544 | MS.gene72353:intron | 45.0% |
! | TCTTCCACGGTTGGTATAAG+GGG | - | chr8.3:21196515-21196534 | MS.gene72353:intron | 45.0% |
!! | GAACTCTAAGGTCTCTGTGA+TGG | - | chr8.3:21196272-21196291 | MS.gene72353:intron | 45.0% |
!! | TGTGTCCTCTGAAACAGCAA+AGG | - | chr8.3:21198905-21198924 | MS.gene72353:intron | 45.0% |
AATTTGGACTGTTGCAGGCC+TGG | + | chr8.3:21199316-21199335 | None:intergenic | 50.0% | |
AGATCCCCTTATACCAACCG+TGG | + | chr8.3:21196522-21196541 | None:intergenic | 50.0% | |
AGGACAACCAGTGAACCAGA+AGG | - | chr8.3:21199338-21199357 | MS.gene72353:intron | 50.0% | |
ATTGCTTAACTAGTGCCCCG+GGG | - | chr8.3:21197182-21197201 | MS.gene72353:intron | 50.0% | |
CCTCGAATTTGGACTGTTGC+AGG | + | chr8.3:21199321-21199340 | None:intergenic | 50.0% | |
CCTGCAACAGTCCAAATTCG+AGG | - | chr8.3:21199318-21199337 | MS.gene72353:intron | 50.0% | |
CTGCTGGTCAAGAACGTTTC+CGG | - | chr8.3:21198612-21198631 | MS.gene72353:intron | 50.0% | |
GAAAATCCGCACTGTTGAGC+AGG | - | chr8.3:21198106-21198125 | MS.gene72353:intron | 50.0% | |
GATTGCTTAACTAGTGCCCC+GGG | - | chr8.3:21197181-21197200 | MS.gene72353:intron | 50.0% | |
GCTTACAAAGTCCACTCCGA+TGG | + | chr8.3:21198002-21198021 | None:intergenic | 50.0% | |
GGAAATTGCTGACAAAGGGC+CGG | + | chr8.3:21198695-21198714 | None:intergenic | 50.0% | |
GGAACAAGCTTTCATGGCCA+TGG | - | chr8.3:21199103-21199122 | MS.gene72353:intron | 50.0% | |
TCTTGTTAACCAATGCCCCC+GGG | + | chr8.3:21197201-21197220 | None:intergenic | 50.0% | |
TGGTTGCTTAACCAATGCCC+CGG | + | chr8.3:21197072-21197091 | None:intergenic | 50.0% | |
! | GTCTTGTTAACCAATGCCCC+CGG | + | chr8.3:21197202-21197221 | None:intergenic | 50.0% |
!! | GCGCATTCGTTGTTTTGCGA+TGG | - | chr8.3:21196016-21196035 | MS.gene72353:intron | 50.0% |
AGAATGTTAACCCGTGCCCC+CGG | - | chr8.3:21197050-21197069 | MS.gene72353:intron | 55.0% | |
AGCTACTATCGTGGGGCTCA+TGG | - | chr8.3:21198647-21198666 | MS.gene72353:intron | 55.0% | |
ATCCGCACTGTTGAGCAGGA+TGG | - | chr8.3:21198110-21198129 | MS.gene72353:intron | 55.0% | |
CAACCAGTGAACCAGAAGGC+TGG | - | chr8.3:21199342-21199361 | MS.gene72353:intron | 55.0% | |
CTTGTTAACCAATGCCCCCG+GGG | + | chr8.3:21197200-21197219 | None:intergenic | 55.0% | |
GCAAGTCATGTCTCCTCCTG+AGG | - | chr8.3:21197459-21197478 | MS.gene72353:intron | 55.0% | |
GGTTGCTTAACCAATGCCCC+GGG | + | chr8.3:21197071-21197090 | None:intergenic | 55.0% | |
GTCTGGTGTCCTACACATGC+CGG | + | chr8.3:21196409-21196428 | None:intergenic | 55.0% | |
GTTGCTTAACCAATGCCCCG+GGG | + | chr8.3:21197070-21197089 | None:intergenic | 55.0% | |
TCCCATCCTGCTCAACAGTG+CGG | + | chr8.3:21198115-21198134 | None:intergenic | 55.0% | |
TCCGCACTGTTGAGCAGGAT+GGG | - | chr8.3:21198111-21198130 | MS.gene72353:intron | 55.0% | |
TTGCTTAACCAATGCCCCGG+GGG | + | chr8.3:21197069-21197088 | None:intergenic | 55.0% | |
TTGCTTAACTAGTGCCCCGG+GGG | - | chr8.3:21197183-21197202 | MS.gene72353:intron | 55.0% | |
! | GTAATCACGTGTGCCGGTGT+CGG | - | chr8.3:21196380-21196399 | MS.gene72353:CDS | 55.0% |
! | GTACCGGCGACGAGTAAATG+AGG | + | chr8.3:21199256-21199275 | None:intergenic | 55.0% |
!! | CAACCAGCCTTCTGGTTCAC+TGG | + | chr8.3:21199348-21199367 | None:intergenic | 55.0% |
AATGTTAACCCGTGCCCCCG+GGG | - | chr8.3:21197052-21197071 | MS.gene72353:intron | 60.0% | |
ACGAGCAGCAACCAGCCTTC+TGG | + | chr8.3:21199356-21199375 | None:intergenic | 60.0% | |
GAATGTTAACCCGTGCCCCC+GGG | - | chr8.3:21197051-21197070 | MS.gene72353:intron | 60.0% | |
GTCAACCTGCCAACAGTGCC+AGG | - | chr8.3:21199295-21199314 | MS.gene72353:intron | 60.0% | |
TGTCGGACACCGGCATGTGT+AGG | - | chr8.3:21196397-21196416 | MS.gene72353:CDS | 60.0% | |
TGTTGCAGGCCTGGCACTGT+TGG | + | chr8.3:21199307-21199326 | None:intergenic | 60.0% | |
CACATGCCGGTGTCCGACAC+CGG | + | chr8.3:21196396-21196415 | None:intergenic | 65.0% | |
TAACCAATGCCCCGGGGGCA+CGG | + | chr8.3:21197064-21197083 | None:intergenic | 65.0% | |
! | AACTAGTGCCCCGGGGGCAT+TGG | - | chr8.3:21197189-21197208 | MS.gene72353:intron | 65.0% |
GCAGGCCTGGCACTGTTGGC+AGG | + | chr8.3:21199303-21199322 | None:intergenic | 70.0% | |
! | AACCAATGCCCCGGGGGCAC+GGG | + | chr8.3:21197063-21197082 | None:intergenic | 70.0% |
! | CGTGTGCCGGTGTCGGACAC+CGG | - | chr8.3:21196387-21196406 | MS.gene72353:CDS | 70.0% |
AACCCGTGCCCCCGGGGCAT+TGG | - | chr8.3:21197058-21197077 | MS.gene72353:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 21195872 | 21199380 | 21195872 | ID=MS.gene72353 |
chr8.3 | mRNA | 21195872 | 21199380 | 21195872 | ID=MS.gene72353.t1;Parent=MS.gene72353 |
chr8.3 | exon | 21199367 | 21199380 | 21199367 | ID=MS.gene72353.t1.exon1;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21199367 | 21199380 | 21199367 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21197765 | 21197837 | 21197765 | ID=MS.gene72353.t1.exon2;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21197765 | 21197837 | 21197765 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21197237 | 21197284 | 21197237 | ID=MS.gene72353.t1.exon3;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21197237 | 21197284 | 21197237 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21197098 | 21197145 | 21197098 | ID=MS.gene72353.t1.exon4;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21197098 | 21197145 | 21197098 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21196576 | 21196647 | 21196576 | ID=MS.gene72353.t1.exon5;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21196576 | 21196647 | 21196576 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21196326 | 21196481 | 21196326 | ID=MS.gene72353.t1.exon6;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21196326 | 21196481 | 21196326 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21196108 | 21196211 | 21196108 | ID=MS.gene72353.t1.exon7;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21196108 | 21196211 | 21196108 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
chr8.3 | exon | 21195872 | 21195965 | 21195872 | ID=MS.gene72353.t1.exon8;Parent=MS.gene72353.t1 |
chr8.3 | CDS | 21195872 | 21195965 | 21195872 | ID=cds.MS.gene72353.t1;Parent=MS.gene72353.t1 |
Gene Sequence |
Protein sequence |