Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60605.t1 | AIT98181.1 | 98.1 | 309 | 6 | 0 | 1 | 309 | 1 | 309 | 4.70E-170 | 607.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60605.t1 | O49814 | 72.3 | 289 | 71 | 4 | 17 | 304 | 31 | 311 | 5.3e-114 | 412.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60605.t1 | A0A097KXR0 | 98.1 | 309 | 6 | 0 | 1 | 309 | 1 | 309 | 3.4e-170 | 607.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene60605 | 0.807861 | 4.11E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene60605 | 0.876398 | 1.44E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene60605 | 0.833293 | 5.80E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene60605 | 0.83362 | 4.80E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene60605 | 0.856918 | 2.32E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene60605 | 0.86666 | 2.42E-65 | -1.69E-46 |
| MS.gene049369 | MS.gene60605 | 0.833326 | 5.69E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene60605 | 0.800214 | 1.60E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene60605 | 0.844503 | 7.26E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene60605 | 0.824274 | 8.82E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene60605 | 0.852754 | 3.75E-61 | -1.69E-46 |
| MS.gene049828 | MS.gene60605 | 0.832018 | 1.20E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene60605 | 0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene60605 | 0.857692 | 1.37E-62 | -1.69E-46 |
| MS.gene050165 | MS.gene60605 | 0.84713 | 1.40E-59 | -1.69E-46 |
| MS.gene050216 | MS.gene60605 | 0.815793 | 7.70E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene60605 | 0.857545 | 1.52E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene60605 | 0.83577 | 1.38E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene60605 | 0.849 | 4.28E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene60605 | 0.827943 | 1.18E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene60605 | 0.83339 | 5.48E-56 | -1.69E-46 |
| MS.gene050662 | MS.gene60605 | 0.8194 | 1.18E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene60605 | 0.83673 | 7.89E-57 | -1.69E-46 |
| MS.gene050686 | MS.gene60605 | 0.82075 | 5.82E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene60605 | 0.812893 | 3.37E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene60605 | 0.845053 | 5.16E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene60605 | 0.844807 | 6.02E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene60605 | 0.862134 | 6.28E-64 | -1.69E-46 |
| MS.gene050950 | MS.gene60605 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene60605 | 0.822947 | 1.80E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene60605 | 0.809814 | 1.57E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene60605 | 0.837598 | 4.73E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene60605 | 0.82525 | 5.19E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene60605 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene60605 | 0.81984 | 9.40E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene60605 | 0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene60605 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene60605 | 0.832035 | 1.19E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene60605 | 0.831638 | 1.49E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene60605 | 0.834902 | 2.29E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene60605 | 0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene60605 | 0.856608 | 2.87E-62 | -1.69E-46 |
| MS.gene052290 | MS.gene60605 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene60605 | 0.875285 | 3.48E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene60605 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene60605 | 0.82321 | 1.57E-53 | -1.69E-46 |
| MS.gene052632 | MS.gene60605 | 0.813177 | 2.92E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene60605 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene60605 | 0.839271 | 1.75E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene60605 | 0.827964 | 1.17E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene60605 | 0.820761 | 5.78E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene60605 | 0.802691 | 4.97E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene60605 | 0.824374 | 8.35E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene60605 | 0.807037 | 6.15E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene60605 | 0.871476 | 6.64E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene60605 | 0.866687 | 2.38E-65 | -1.69E-46 |
| MS.gene053322 | MS.gene60605 | 0.848132 | 7.44E-60 | -1.69E-46 |
| MS.gene053384 | MS.gene60605 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene60605 | 0.812596 | 3.92E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene60605 | 0.839896 | 1.20E-57 | -1.69E-46 |
| MS.gene053626 | MS.gene60605 | 0.806083 | 9.77E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene60605 | 0.822877 | 1.87E-53 | -1.69E-46 |
| MS.gene053813 | MS.gene60605 | 0.844664 | 6.57E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene60605 | 0.82174 | 3.44E-53 | -1.69E-46 |
| MS.gene054003 | MS.gene60605 | 0.8163 | 5.94E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene60605 | 0.837662 | 4.55E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene60605 | 0.832932 | 7.13E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene60605 | 0.871179 | 8.32E-67 | -1.69E-46 |
| MS.gene054802 | MS.gene60605 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene60605 | 0.823866 | 1.10E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene60605 | 0.827233 | 1.75E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene60605 | 0.836789 | 7.62E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene60605 | 0.856569 | 2.94E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene60605 | 0.810366 | 1.19E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene60605 | 0.832591 | 8.66E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene60605 | 0.851093 | 1.11E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene60605 | 0.862517 | 4.79E-64 | -1.69E-46 |
| MS.gene055502 | MS.gene60605 | 0.845007 | 5.31E-59 | -1.69E-46 |
| MS.gene055636 | MS.gene60605 | 0.856085 | 4.08E-62 | -1.69E-46 |
| MS.gene055638 | MS.gene60605 | 0.840226 | 9.88E-58 | -1.69E-46 |
| MS.gene055647 | MS.gene60605 | 0.859874 | 3.06E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene60605 | 0.840181 | 1.02E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene60605 | 0.889474 | 2.35E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene60605 | 0.833333 | 5.66E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene60605 | 0.817982 | 2.49E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene60605 | 0.864015 | 1.65E-64 | -1.69E-46 |
| MS.gene056422 | MS.gene60605 | 0.837499 | 5.01E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene60605 | 0.813918 | 2.01E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene60605 | 0.833345 | 5.63E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene60605 | 0.807006 | 6.24E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene60605 | 0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene60605 | 0.864134 | 1.51E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene60605 | 0.873552 | 1.35E-67 | -1.69E-46 |
| MS.gene056898 | MS.gene60605 | 0.809781 | 1.60E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene60605 | 0.80795 | 3.93E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene60605 | 0.831628 | 1.50E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene60605 | 0.810404 | 1.17E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene60605 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene60605 | 0.863672 | 2.11E-64 | -1.69E-46 |
| MS.gene057146 | MS.gene60605 | 0.851511 | 8.46E-61 | -1.69E-46 |
| MS.gene057285 | MS.gene60605 | 0.83126 | 1.85E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene60605 | 0.838738 | 2.41E-57 | -1.69E-46 |
| MS.gene05735 | MS.gene60605 | 0.817546 | 3.12E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene60605 | 0.881281 | 2.73E-70 | -1.69E-46 |
| MS.gene057478 | MS.gene60605 | -0.810402 | 1.17E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene60605 | 0.861605 | 9.12E-64 | -1.69E-46 |
| MS.gene058019 | MS.gene60605 | 0.824685 | 7.06E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene60605 | 0.826715 | 2.33E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene60605 | 0.85657 | 2.94E-62 | -1.69E-46 |
| MS.gene058459 | MS.gene60605 | 0.824141 | 9.48E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene60605 | 0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene60605 | 0.837253 | 5.80E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene60605 | 0.826925 | 2.08E-54 | -1.69E-46 |
| MS.gene058840 | MS.gene60605 | -0.821783 | 3.36E-53 | -1.69E-46 |
| MS.gene058903 | MS.gene60605 | 0.812478 | 4.15E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene60605 | 0.824201 | 9.18E-54 | -1.69E-46 |
| MS.gene059029 | MS.gene60605 | 0.845975 | 2.90E-59 | -1.69E-46 |
| MS.gene05913 | MS.gene60605 | 0.831231 | 1.88E-55 | -1.69E-46 |
| MS.gene059305 | MS.gene60605 | 0.83125 | 1.86E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene60605 | 0.839441 | 1.58E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene60605 | 0.81513 | 1.08E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene60605 | 0.851157 | 1.07E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene60605 | 0.842419 | 2.62E-58 | -1.69E-46 |
| MS.gene059711 | MS.gene60605 | 0.848062 | 7.79E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene60605 | 0.84431 | 8.18E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene60605 | 0.824691 | 7.04E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene60605 | 0.832999 | 6.86E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene60605 | 0.85567 | 5.40E-62 | -1.69E-46 |
| MS.gene060193 | MS.gene60605 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene60605 | 0.845868 | 3.10E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene60605 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene60605 | 0.863241 | 2.87E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene60605 | 0.886156 | 4.37E-72 | -1.69E-46 |
| MS.gene060837 | MS.gene60605 | 0.810945 | 8.95E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene60605 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene60605 | 0.837959 | 3.82E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene60605 | 0.980399 | 3.95E-150 | -1.69E-46 |
| MS.gene061150 | MS.gene60605 | 0.821926 | 3.11E-53 | -1.69E-46 |
| MS.gene061171 | MS.gene60605 | 0.854643 | 1.07E-61 | -1.69E-46 |
| MS.gene061200 | MS.gene60605 | 0.881666 | 1.99E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60605 | MS.gene93230 | PPI |
| MS.gene60605 | MS.gene010815 | PPI |
| MS.gene60605 | MS.gene36168 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60605.t1 | MTR_1g100070 | 89.968 | 309 | 18 | 2 | 1 | 309 | 1 | 296 | 0.0 | 522 |
| MS.gene60605.t1 | MTR_1g100070 | 83.483 | 333 | 18 | 3 | 1 | 309 | 1 | 320 | 0.0 | 509 |
| MS.gene60605.t1 | MTR_1g100070 | 88.346 | 266 | 18 | 2 | 1 | 266 | 1 | 253 | 8.54e-165 | 460 |
| MS.gene60605.t1 | MTR_6g048440 | 72.785 | 316 | 76 | 4 | 1 | 309 | 1 | 313 | 2.10e-157 | 442 |
| MS.gene60605.t1 | MTR_6g048440 | 72.165 | 291 | 71 | 4 | 1 | 284 | 1 | 288 | 9.15e-151 | 426 |
| MS.gene60605.t1 | MTR_6g048440 | 70.330 | 273 | 71 | 4 | 1 | 266 | 1 | 270 | 1.34e-136 | 389 |
| MS.gene60605.t1 | MTR_6g048440 | 67.391 | 230 | 65 | 4 | 1 | 223 | 1 | 227 | 1.17e-105 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60605.t1 | AT4G25700 | 66.561 | 314 | 87 | 6 | 1 | 309 | 1 | 301 | 5.43e-145 | 410 |
| MS.gene60605.t1 | AT5G52570 | 67.722 | 316 | 74 | 8 | 1 | 307 | 1 | 297 | 4.66e-136 | 387 |
| MS.gene60605.t1 | AT4G25700 | 60.088 | 228 | 73 | 6 | 1 | 223 | 1 | 215 | 1.95e-85 | 256 |
| MS.gene60605.t1 | AT4G25700 | 60.088 | 228 | 73 | 6 | 1 | 223 | 1 | 215 | 1.95e-85 | 256 |
| MS.gene60605.t1 | AT5G52570 | 40.064 | 312 | 98 | 11 | 1 | 307 | 1 | 228 | 2.83e-44 | 151 |
Find 85 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGAGATTGTAGGGCTTTA+AGG | 0.141087 | 1.2:+69551698 | None:intergenic |
| TTTAGGTAGGTATGGAATAT+TGG | 0.214997 | 1.2:-69550961 | MS.gene60605:intron |
| TTCATCTGGTTAGTGTGTTT+TGG | 0.260989 | 1.2:+69551531 | None:intergenic |
| GGTCTTGGAATTACGGTGTT+TGG | 0.277671 | 1.2:-69550370 | MS.gene60605:CDS |
| GCAATTGCTCTTCTCTCATA+TGG | 0.287011 | 1.2:-69550593 | MS.gene60605:CDS |
| TAGCTTTGGTGTTACCTCTA+TGG | 0.317708 | 1.2:-69551391 | MS.gene60605:CDS |
| TGAGGGCTGGGTTTACTGTT+AGG | 0.327820 | 1.2:+69551486 | None:intergenic |
| TTAGGTAGGTATGGAATATT+GGG | 0.328698 | 1.2:-69550960 | MS.gene60605:intron |
| CTTCACCGTTTGTGTTCTAA+TGG | 0.335091 | 1.2:-69551559 | MS.gene60605:CDS |
| GTCTTGGAATTACGGTGTTT+GGG | 0.363241 | 1.2:-69550369 | MS.gene60605:CDS |
| GATGGGCTCATGAGGTTCTA+TGG | 0.363709 | 1.2:-69550934 | MS.gene60605:CDS |
| GCTATGACGGAAACCTCTTA+AGG | 0.364201 | 1.2:+69551620 | None:intergenic |
| TGACTAGGGTCTTGGAATTA+CGG | 0.376865 | 1.2:-69550377 | MS.gene60605:intron |
| TGAGGGTTGGAGGAGATTGT+AGG | 0.377556 | 1.2:+69551689 | None:intergenic |
| TTGGTGCCTGGTCTCTGCTT+TGG | 0.387095 | 1.2:-69550554 | MS.gene60605:CDS |
| GGGAAGAAGTTGAGGGTTGG+AGG | 0.387923 | 1.2:+69551679 | None:intergenic |
| GTATGGAATATTGGGCTAGA+TGG | 0.394991 | 1.2:-69550952 | MS.gene60605:CDS |
| GTTCCTTGGTCTGAAATGTT+TGG | 0.410492 | 1.2:-69551094 | MS.gene60605:CDS |
| GGGGAAGGGGAAGAAGTTGA+GGG | 0.413157 | 1.2:+69551672 | None:intergenic |
| TCATCTTATGACTAGGGTCT+TGG | 0.416939 | 1.2:-69550385 | MS.gene60605:intron |
| CTATGACGGAAACCTCTTAA+GGG | 0.426369 | 1.2:+69551621 | None:intergenic |
| TTTAACAAGGGATTGGTGCC+TGG | 0.432109 | 1.2:-69550566 | MS.gene60605:CDS |
| AGGGGAAGGGGAAGAAGTTG+AGG | 0.434588 | 1.2:+69551671 | None:intergenic |
| GGCACATTTGCCCTCTCAGT+TGG | 0.435097 | 1.2:-69551073 | MS.gene60605:CDS |
| CATGTTTGTCCATGATGGAT+TGG | 0.437840 | 1.2:-69550338 | MS.gene60605:CDS |
| TTATAGATTCTCATGGCAAA+TGG | 0.438735 | 1.2:-69551352 | MS.gene60605:CDS |
| AAAACATCATTAAGCTCAAA+TGG | 0.441795 | 1.2:+69550638 | None:intergenic |
| CCCCTTTGAATTTGTCCGAA+TGG | 0.445592 | 1.2:+69550078 | None:intergenic |
| GAGGGTTGGAGGAGATTGTA+GGG | 0.445723 | 1.2:+69551690 | None:intergenic |
| GGGCTTTAAGGTTGTGGCGG+TGG | 0.448289 | 1.2:+69551710 | None:intergenic |
| GCCTACATGTTTGTCCATGA+TGG | 0.451700 | 1.2:-69550343 | MS.gene60605:CDS |
| AGCTCAAATGGTCCCTCTCT+TGG | 0.457561 | 1.2:+69550650 | None:intergenic |
| AGGGTAGTGGAGAGGTTCCT+TGG | 0.458584 | 1.2:-69551108 | MS.gene60605:CDS |
| TTCTTGTTCTTTGGGTTCGA+AGG | 0.461870 | 1.2:+69551592 | None:intergenic |
| TTGTTTGCAGCTCCACCATT+CGG | 0.466820 | 1.2:-69550093 | MS.gene60605:intron |
| AGCTAGAGAAAGAGATAAGT+AGG | 0.469767 | 1.2:-69549603 | MS.gene60605:CDS |
| AACAGCTAAGATTGCCATAG+AGG | 0.474363 | 1.2:+69551377 | None:intergenic |
| AAATTCAAAGGGGTGCCATA+TGG | 0.476176 | 1.2:-69550068 | MS.gene60605:CDS |
| ACCATTCGGACAAATTCAAA+GGG | 0.476981 | 1.2:-69550079 | MS.gene60605:CDS |
| GCAGCTGTAATGTCTAGCTT+TGG | 0.479617 | 1.2:-69551405 | MS.gene60605:CDS |
| TATGAGAGAAGAGCAATTGC+AGG | 0.484302 | 1.2:+69550596 | None:intergenic |
| GAAGTAGGGCACGTTGGCAA+TGG | 0.491586 | 1.2:+69550291 | None:intergenic |
| AGACCTCATGCATGTGCCAC+AGG | 0.495599 | 1.2:+69550903 | None:intergenic |
| ACGTTGGCAATGGGACCCAC+AGG | 0.500337 | 1.2:+69550301 | None:intergenic |
| AGCAGCAACTCTTGTGAAGT+AGG | 0.501312 | 1.2:+69550276 | None:intergenic |
| ATTGTAGGGCTTTAAGGTTG+TGG | 0.501902 | 1.2:+69551704 | None:intergenic |
| AAGGGGAAGAAGTTGAGGGT+TGG | 0.509214 | 1.2:+69551676 | None:intergenic |
| TATGGAATATTGGGCTAGAT+GGG | 0.511988 | 1.2:-69550951 | MS.gene60605:CDS |
| AAGTAGGGCACGTTGGCAAT+GGG | 0.513920 | 1.2:+69550292 | None:intergenic |
| ATCTTCCATTAGAACACAAA+CGG | 0.516336 | 1.2:+69551554 | None:intergenic |
| CACCATTCGGACAAATTCAA+AGG | 0.517507 | 1.2:-69550080 | MS.gene60605:CDS |
| CTTTGAATTTGTCCGAATGG+TGG | 0.523450 | 1.2:+69550081 | None:intergenic |
| GTGCAGGAAGTTGAAGAAGT+GGG | 0.525266 | 1.2:-69549637 | MS.gene60605:intron |
| CTGTTTATTATAGATTCTCA+TGG | 0.538973 | 1.2:-69551359 | MS.gene60605:CDS |
| GGTGCAGGAAGTTGAAGAAG+TGG | 0.541999 | 1.2:-69549638 | MS.gene60605:intron |
| GGGCTGGGTTTACTGTTAGG+AGG | 0.546115 | 1.2:+69551489 | None:intergenic |
| TCTTATGAACCAATCCATCA+TGG | 0.562531 | 1.2:+69550329 | None:intergenic |
| TTCCCTGTGGCACATGCATG+AGG | 0.571758 | 1.2:-69550906 | MS.gene60605:intron |
| TTGTTTGTATGATAGGGTAG+TGG | 0.576953 | 1.2:-69551121 | MS.gene60605:intron |
| GGTGGAAAGTTCAGCCGCCA+TGG | 0.584774 | 1.2:+69551728 | None:intergenic |
| GCAGCAACTCTTGTGAAGTA+GGG | 0.586414 | 1.2:+69550277 | None:intergenic |
| CAGGAAGTTGAAGAAGTGGG+AGG | 0.586564 | 1.2:-69549634 | MS.gene60605:CDS |
| TAGACATTACAGCTGCAACT+AGG | 0.594222 | 1.2:+69551412 | None:intergenic |
| AGGAAGTTGAAGAAGTGGGA+GGG | 0.595124 | 1.2:-69549633 | MS.gene60605:CDS |
| GTCACATCATCGACCAAGAG+AGG | 0.605840 | 1.2:-69550663 | MS.gene60605:CDS |
| TTGGGCTAGATGGGCTCATG+AGG | 0.606671 | 1.2:-69550942 | MS.gene60605:CDS |
| TATGACGGAAACCTCTTAAG+GGG | 0.609525 | 1.2:+69551622 | None:intergenic |
| TACAGCAGCACCAACTGAGA+GGG | 0.619847 | 1.2:+69551063 | None:intergenic |
| TTCTATGGCATGCTTCCCTG+TGG | 0.625607 | 1.2:-69550919 | MS.gene60605:CDS |
| GACCTCATGCATGTGCCACA+GGG | 0.632725 | 1.2:+69550904 | None:intergenic |
| TGTATGATAGGGTAGTGGAG+AGG | 0.645728 | 1.2:-69551116 | MS.gene60605:intron |
| TAGATTCTCATGGCAAATGG+AGG | 0.648620 | 1.2:-69551349 | MS.gene60605:intron |
| ACTGCACCAAAGCAGAGACC+AGG | 0.649131 | 1.2:+69550548 | None:intergenic |
| TCCATCATGGACAAACATGT+AGG | 0.652573 | 1.2:+69550342 | None:intergenic |
| GTAGGGCTTTAAGGTTGTGG+CGG | 0.654013 | 1.2:+69551707 | None:intergenic |
| TCACATCATCGACCAAGAGA+GGG | 0.657623 | 1.2:-69550662 | MS.gene60605:CDS |
| GTGCCAAACATTTCAGACCA+AGG | 0.665898 | 1.2:+69551091 | None:intergenic |
| TTACAGCAGCACCAACTGAG+AGG | 0.672349 | 1.2:+69551062 | None:intergenic |
| TCTTGTGAAGTAGGGCACGT+TGG | 0.672979 | 1.2:+69550285 | None:intergenic |
| CGTTGGCAATGGGACCCACA+GGG | 0.676768 | 1.2:+69550302 | None:intergenic |
| GGTTCATAAGAGATTCCCTG+TGG | 0.688013 | 1.2:-69550317 | MS.gene60605:CDS |
| ATGACGGAAACCTCTTAAGG+GGG | 0.694254 | 1.2:+69551623 | None:intergenic |
| CACTAACCAGATGAAAACAG+AGG | 0.697643 | 1.2:-69551523 | MS.gene60605:CDS |
| GTTCATAAGAGATTCCCTGT+GGG | 0.700599 | 1.2:-69550316 | MS.gene60605:CDS |
| CCATTCGGACAAATTCAAAG+GGG | 0.749285 | 1.2:-69550078 | MS.gene60605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATGAAATTGGTTAATTT+TGG | - | chr1.2:69550294-69550313 | MS.gene60605:CDS | 15.0% |
| !!! | ATTCAACATTGATTTTTTTT+AGG | - | chr1.2:69550324-69550343 | MS.gene60605:CDS | 15.0% |
| !!! | ATTTTTATTTTTTGTGCAAA+TGG | - | chr1.2:69551156-69551175 | MS.gene60605:intron | 15.0% |
| !!! | TTTTTATTTTTTGTGCAAAT+GGG | - | chr1.2:69551157-69551176 | MS.gene60605:intron | 15.0% |
| !! | AAAAAAAAAAAACCAAGAAG+AGG | + | chr1.2:69551298-69551317 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAACCAAGAAGA+GGG | + | chr1.2:69551297-69551316 | None:intergenic | 20.0% |
| !! | TAAACAAAAGAAAATATGAG+TGG | - | chr1.2:69551114-69551133 | MS.gene60605:intron | 20.0% |
| !! | TTAGTAAATCCCTTAATTAA+CGG | - | chr1.2:69550806-69550825 | MS.gene60605:intron | 20.0% |
| !!! | AACATTGATTTTTTTTAGGT+AGG | - | chr1.2:69550328-69550347 | MS.gene60605:CDS | 20.0% |
| !!! | ATTTTTAGTTGCACAAAAAT+TGG | - | chr1.2:69549839-69549858 | MS.gene60605:intron | 20.0% |
| !!! | TCATATGGTTTTTTTAACAA+GGG | - | chr1.2:69550724-69550743 | MS.gene60605:intron | 20.0% |
| ! | AAAACATCATTAAGCTCAAA+TGG | + | chr1.2:69550667-69550686 | None:intergenic | 25.0% |
| ! | ATGTGAAAGAAAAGAGAAAA+TGG | + | chr1.2:69550449-69550468 | None:intergenic | 25.0% |
| ! | ATGTGAATAAACAAATGCAT+TGG | - | chr1.2:69550495-69550514 | MS.gene60605:intron | 25.0% |
| ! | CTGTTTATTATAGATTCTCA+TGG | - | chr1.2:69549943-69549962 | MS.gene60605:intron | 25.0% |
| ! | GATTATTCATCAATTAAGTG+TGG | - | chr1.2:69551390-69551409 | MS.gene60605:CDS | 25.0% |
| ! | TCAAGCAATTCTTAATTACT+TGG | + | chr1.2:69551057-69551076 | None:intergenic | 25.0% |
| ! | TCAGCAATTGAAAATGAAAT+TGG | - | chr1.2:69550284-69550303 | MS.gene60605:CDS | 25.0% |
| ! | TCATTTCAGAGAATAAATCA+GGG | + | chr1.2:69550889-69550908 | None:intergenic | 25.0% |
| ! | TGTGAAAGAAAAGAGAAAAT+GGG | + | chr1.2:69550448-69550467 | None:intergenic | 25.0% |
| ! | TTTGTGCAACTAAAAATTGA+GGG | + | chr1.2:69549836-69549855 | None:intergenic | 25.0% |
| !! | TTTTGTGCAACTAAAAATTG+AGG | + | chr1.2:69549837-69549856 | None:intergenic | 25.0% |
| !!! | AACGTTTTTTGAATGATGTT+TGG | - | chr1.2:69550157-69550176 | MS.gene60605:intron | 25.0% |
| !!! | ACGTTTTTTGAATGATGTTT+GGG | - | chr1.2:69550158-69550177 | MS.gene60605:intron | 25.0% |
| !!! | CTCATATGGTTTTTTTAACA+AGG | - | chr1.2:69550723-69550742 | MS.gene60605:intron | 25.0% |
| !!! | TGATTTTTTTTAGGTAGGTA+TGG | - | chr1.2:69550333-69550352 | MS.gene60605:CDS | 25.0% |
| !!! | TGTTGATTTTCTTGTTCTTT+GGG | + | chr1.2:69549721-69549740 | None:intergenic | 25.0% |
| ATCTTCCATTAGAACACAAA+CGG | + | chr1.2:69549751-69549770 | None:intergenic | 30.0% | |
| CAAACAAACAACAAAACCAA+AGG | + | chr1.2:69551196-69551215 | None:intergenic | 30.0% | |
| CATCTTTGATTCAATGCTAT+TGG | + | chr1.2:69550603-69550622 | None:intergenic | 30.0% | |
| CCAATGAAACCGTTAATTAA+GGG | + | chr1.2:69550818-69550837 | None:intergenic | 30.0% | |
| CCTTAATTAACGGTTTCATT+GGG | - | chr1.2:69550816-69550835 | MS.gene60605:intron | 30.0% | |
| GATTCAATGCTATTGGTATA+AGG | + | chr1.2:69550596-69550615 | None:intergenic | 30.0% | |
| GTCATTTCAGAGAATAAATC+AGG | + | chr1.2:69550890-69550909 | None:intergenic | 30.0% | |
| TTAGGTAGGTATGGAATATT+GGG | - | chr1.2:69550342-69550361 | MS.gene60605:CDS | 30.0% | |
| TTATAGATTCTCATGGCAAA+TGG | - | chr1.2:69549950-69549969 | MS.gene60605:intron | 30.0% | |
| TTTAGGTAGGTATGGAATAT+TGG | - | chr1.2:69550341-69550360 | MS.gene60605:CDS | 30.0% | |
| TTTCAGCTCCTACAAAATTA+CGG | + | chr1.2:69550038-69550057 | None:intergenic | 30.0% | |
| ! | ATTTGACACCGTAATTTTGT+AGG | - | chr1.2:69550027-69550046 | MS.gene60605:intron | 30.0% |
| ! | CAAATTTGGATGCATTTTGT+GGG | - | chr1.2:69551611-69551630 | MS.gene60605:CDS | 30.0% |
| ! | GCAAAATATTCAAGTTAGCA+TGG | + | chr1.2:69550574-69550593 | None:intergenic | 30.0% |
| ! | TAAGTGCATGTTTGAAACAA+CGG | + | chr1.2:69550122-69550141 | None:intergenic | 30.0% |
| !! | TTTGGGTTGTTTGTATGATA+GGG | - | chr1.2:69550175-69550194 | MS.gene60605:intron | 30.0% |
| !!! | GTGTTGATTTTCTTGTTCTT+TGG | + | chr1.2:69549722-69549741 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTTAACAAGGGAT+TGG | - | chr1.2:69550729-69550748 | MS.gene60605:intron | 30.0% |
| AAAAGAGAAAATGGGAAGAC+TGG | + | chr1.2:69550440-69550459 | None:intergenic | 35.0% | |
| ACCATTCGGACAAATTCAAA+GGG | - | chr1.2:69551223-69551242 | MS.gene60605:intron | 35.0% | |
| AGCTAGAGAAAGAGATAAGT+AGG | - | chr1.2:69551699-69551718 | MS.gene60605:CDS | 35.0% | |
| ATCCTCATCATCTTATGACT+AGG | - | chr1.2:69550910-69550929 | MS.gene60605:CDS | 35.0% | |
| CCACAAAATGCATCCAAATT+TGG | + | chr1.2:69551613-69551632 | None:intergenic | 35.0% | |
| CCCAATGAAACCGTTAATTA+AGG | + | chr1.2:69550819-69550838 | None:intergenic | 35.0% | |
| CCCTTAATTAACGGTTTCAT+TGG | - | chr1.2:69550815-69550834 | MS.gene60605:intron | 35.0% | |
| CTAGTTGAGTAGTACTTATG+GGG | - | chr1.2:69551491-69551510 | MS.gene60605:CDS | 35.0% | |
| GCTAGTTGAGTAGTACTTAT+GGG | - | chr1.2:69551490-69551509 | MS.gene60605:CDS | 35.0% | |
| TCCTCATCATCTTATGACTA+GGG | - | chr1.2:69550911-69550930 | MS.gene60605:CDS | 35.0% | |
| TCTTATGAACCAATCCATCA+TGG | + | chr1.2:69550976-69550995 | None:intergenic | 35.0% | |
| TGTGCAAATGGGATCTAATT+TGG | - | chr1.2:69551168-69551187 | MS.gene60605:intron | 35.0% | |
| TGTGGAGAAAAGAGAAAAAC+TGG | - | chr1.2:69551408-69551427 | MS.gene60605:CDS | 35.0% | |
| TTGTTTGTATGATAGGGTAG+TGG | - | chr1.2:69550181-69550200 | MS.gene60605:intron | 35.0% | |
| ! | CCAAATTTGGATGCATTTTG+TGG | - | chr1.2:69551610-69551629 | MS.gene60605:CDS | 35.0% |
| ! | TATGGAATATTGGGCTAGAT+GGG | - | chr1.2:69550351-69550370 | MS.gene60605:CDS | 35.0% |
| ! | TTCATCTGGTTAGTGTGTTT+TGG | + | chr1.2:69549774-69549793 | None:intergenic | 35.0% |
| ! | TTTCTTCCTCTGTTTTCATC+TGG | + | chr1.2:69549788-69549807 | None:intergenic | 35.0% |
| !! | GTTTGGGTTGTTTGTATGAT+AGG | - | chr1.2:69550174-69550193 | MS.gene60605:intron | 35.0% |
| !! | TTCGAAGGATTTTGCTATGA+CGG | + | chr1.2:69549698-69549717 | None:intergenic | 35.0% |
| AACAGCTAAGATTGCCATAG+AGG | + | chr1.2:69549928-69549947 | None:intergenic | 40.0% | |
| AAGAAGAGGGAATGTGAATG+TGG | + | chr1.2:69551284-69551303 | None:intergenic | 40.0% | |
| ACATTCACATTCCCTCTTCT+TGG | - | chr1.2:69551283-69551302 | MS.gene60605:intron | 40.0% | |
| ACCCTAGTCATAAGATGATG+AGG | + | chr1.2:69550915-69550934 | None:intergenic | 40.0% | |
| ACTCTGATACACACGTGATT+CGG | - | chr1.2:69550087-69550106 | MS.gene60605:intron | 40.0% | |
| CACCATTCGGACAAATTCAA+AGG | - | chr1.2:69551222-69551241 | MS.gene60605:intron | 40.0% | |
| CACTAACCAGATGAAAACAG+AGG | - | chr1.2:69549779-69549798 | MS.gene60605:intron | 40.0% | |
| CCATTCGGACAAATTCAAAG+GGG | - | chr1.2:69551224-69551243 | MS.gene60605:intron | 40.0% | |
| CGCTAGTTGAGTAGTACTTA+TGG | - | chr1.2:69551489-69551508 | MS.gene60605:CDS | 40.0% | |
| CTTCACCGTTTGTGTTCTAA+TGG | - | chr1.2:69549743-69549762 | MS.gene60605:intron | 40.0% | |
| CTTTGAATTTGTCCGAATGG+TGG | + | chr1.2:69551224-69551243 | None:intergenic | 40.0% | |
| GCAACTAAAAATTGAGGGCT+GGG | + | chr1.2:69549831-69549850 | None:intergenic | 40.0% | |
| GCAATTGCTCTTCTCTCATA+TGG | - | chr1.2:69550709-69550728 | MS.gene60605:intron | 40.0% | |
| GGTCCTAAAAAGAGTCCATA+TGG | + | chr1.2:69551252-69551271 | None:intergenic | 40.0% | |
| GGTGCTAATAACACATTGCT+TGG | - | chr1.2:69551632-69551651 | MS.gene60605:CDS | 40.0% | |
| GTCTTGGAATTACGGTGTTT+GGG | - | chr1.2:69550933-69550952 | MS.gene60605:CDS | 40.0% | |
| GTTCATAAGAGATTCCCTGT+GGG | - | chr1.2:69550986-69551005 | MS.gene60605:intron | 40.0% | |
| TAGACATTACAGCTGCAACT+AGG | + | chr1.2:69549893-69549912 | None:intergenic | 40.0% | |
| TAGATTCTCATGGCAAATGG+AGG | - | chr1.2:69549953-69549972 | MS.gene60605:intron | 40.0% | |
| TATGAGAGAAGAGCAATTGC+AGG | + | chr1.2:69550709-69550728 | None:intergenic | 40.0% | |
| TCATCTTATGACTAGGGTCT+TGG | - | chr1.2:69550917-69550936 | MS.gene60605:CDS | 40.0% | |
| TCCATCATGGACAAACATGT+AGG | + | chr1.2:69550963-69550982 | None:intergenic | 40.0% | |
| TGACTAGGGTCTTGGAATTA+CGG | - | chr1.2:69550925-69550944 | MS.gene60605:CDS | 40.0% | |
| TGCAACTAAAAATTGAGGGC+TGG | + | chr1.2:69549832-69549851 | None:intergenic | 40.0% | |
| ! | CTATGACGGAAACCTCTTAA+GGG | + | chr1.2:69549684-69549703 | None:intergenic | 40.0% |
| ! | GTATGGAATATTGGGCTAGA+TGG | - | chr1.2:69550350-69550369 | MS.gene60605:CDS | 40.0% |
| ! | GTGCCATATGGACTCTTTTT+AGG | - | chr1.2:69551246-69551265 | MS.gene60605:intron | 40.0% |
| ! | GTTCCTTGGTCTGAAATGTT+TGG | - | chr1.2:69550208-69550227 | MS.gene60605:intron | 40.0% |
| ! | TATGACGGAAACCTCTTAAG+GGG | + | chr1.2:69549683-69549702 | None:intergenic | 40.0% |
| ! | TTCTTGTTCTTTGGGTTCGA+AGG | + | chr1.2:69549713-69549732 | None:intergenic | 40.0% |
| !! | AAATTCAAAGGGGTGCCATA+TGG | - | chr1.2:69551234-69551253 | MS.gene60605:intron | 40.0% |
| !! | AACAGTGTTGGGGTTGTTTT+AGG | + | chr1.2:69549654-69549673 | None:intergenic | 40.0% |
| !! | ACAGTGTTGGGGTTGTTTTA+GGG | + | chr1.2:69549653-69549672 | None:intergenic | 40.0% |
| !! | ATTGTAGGGCTTTAAGGTTG+TGG | + | chr1.2:69549601-69549620 | None:intergenic | 40.0% |
| !! | CATGTTTGTCCATGATGGAT+TGG | - | chr1.2:69550964-69550983 | MS.gene60605:intron | 40.0% |
| !! | TAGCTTTGGTGTTACCTCTA+TGG | - | chr1.2:69549911-69549930 | MS.gene60605:intron | 40.0% |
| !!! | TGGACTCTTTTTAGGACCAA+AGG | - | chr1.2:69551254-69551273 | MS.gene60605:intron | 40.0% |
| AGCAGCAACTCTTGTGAAGT+AGG | + | chr1.2:69551029-69551048 | None:intergenic | 45.0% | |
| AGGAAGTTGAAGAAGTGGGA+GGG | - | chr1.2:69551669-69551688 | MS.gene60605:CDS | 45.0% | |
| AGTGTGCTCGTAGCCAAATT+TGG | - | chr1.2:69551597-69551616 | MS.gene60605:CDS | 45.0% | |
| ATGTGAATGTGGCTGACCTT+TGG | + | chr1.2:69551273-69551292 | None:intergenic | 45.0% | |
| CACATTGCTTGGCTGACATA+TGG | - | chr1.2:69551643-69551662 | MS.gene60605:CDS | 45.0% | |
| CCCCTTTGAATTTGTCCGAA+TGG | + | chr1.2:69551227-69551246 | None:intergenic | 45.0% | |
| GAGGAGATTGTAGGGCTTTA+AGG | + | chr1.2:69549607-69549626 | None:intergenic | 45.0% | |
| GCAGCAACTCTTGTGAAGTA+GGG | + | chr1.2:69551028-69551047 | None:intergenic | 45.0% | |
| GCCTACATGTTTGTCCATGA+TGG | - | chr1.2:69550959-69550978 | MS.gene60605:CDS | 45.0% | |
| GGTCTTGGAATTACGGTGTT+TGG | - | chr1.2:69550932-69550951 | MS.gene60605:CDS | 45.0% | |
| GGTTCATAAGAGATTCCCTG+TGG | - | chr1.2:69550985-69551004 | MS.gene60605:intron | 45.0% | |
| GTGCAGGAAGTTGAAGAAGT+GGG | - | chr1.2:69551665-69551684 | MS.gene60605:CDS | 45.0% | |
| GTGCCAAACATTTCAGACCA+AGG | + | chr1.2:69550214-69550233 | None:intergenic | 45.0% | |
| TCACATCATCGACCAAGAGA+GGG | - | chr1.2:69550640-69550659 | MS.gene60605:CDS | 45.0% | |
| TGGGAAGACTGGTGAAGAAT+CGG | + | chr1.2:69550429-69550448 | None:intergenic | 45.0% | |
| TTGTTTGCAGCTCCACCATT+CGG | - | chr1.2:69551209-69551228 | MS.gene60605:intron | 45.0% | |
| ! | ATGACGGAAACCTCTTAAGG+GGG | + | chr1.2:69549682-69549701 | None:intergenic | 45.0% |
| ! | GCAGCTGTAATGTCTAGCTT+TGG | - | chr1.2:69549897-69549916 | MS.gene60605:intron | 45.0% |
| ! | GCTATGACGGAAACCTCTTA+AGG | + | chr1.2:69549685-69549704 | None:intergenic | 45.0% |
| ! | TTTAACAAGGGATTGGTGCC+TGG | - | chr1.2:69550736-69550755 | MS.gene60605:intron | 45.0% |
| !! | GGGATCTAATTTGGTGCCTT+TGG | - | chr1.2:69551177-69551196 | MS.gene60605:intron | 45.0% |
| !! | TGTATGATAGGGTAGTGGAG+AGG | - | chr1.2:69550186-69550205 | MS.gene60605:intron | 45.0% |
| !!! | CAGTGTTGGGGTTGTTTTAG+GGG | + | chr1.2:69549652-69549671 | None:intergenic | 45.0% |
| !!! | TTGGGGTTGTTTTAGGGGAA+GGG | + | chr1.2:69549647-69549666 | None:intergenic | 45.0% |
| AAGGGGAAGAAGTTGAGGGT+TGG | + | chr1.2:69549629-69549648 | None:intergenic | 50.0% | |
| AAGGGGGTGAAGAACAGTGT+TGG | + | chr1.2:69549666-69549685 | None:intergenic | 50.0% | |
| AAGTAGGGCACGTTGGCAAT+GGG | + | chr1.2:69551013-69551032 | None:intergenic | 50.0% | |
| AGCTCAAATGGTCCCTCTCT+TGG | + | chr1.2:69550655-69550674 | None:intergenic | 50.0% | |
| AGGGGGTGAAGAACAGTGTT+GGG | + | chr1.2:69549665-69549684 | None:intergenic | 50.0% | |
| CAGGAAGTTGAAGAAGTGGG+AGG | - | chr1.2:69551668-69551687 | MS.gene60605:CDS | 50.0% | |
| CTGTTCTTCACCCCCTTAAG+AGG | - | chr1.2:69549669-69549688 | MS.gene60605:intron | 50.0% | |
| GAGGGTTGGAGGAGATTGTA+GGG | + | chr1.2:69549615-69549634 | None:intergenic | 50.0% | |
| GGTGCAGGAAGTTGAAGAAG+TGG | - | chr1.2:69551664-69551683 | MS.gene60605:CDS | 50.0% | |
| GTCACATCATCGACCAAGAG+AGG | - | chr1.2:69550639-69550658 | MS.gene60605:CDS | 50.0% | |
| TACAGCAGCACCAACTGAGA+GGG | + | chr1.2:69550242-69550261 | None:intergenic | 50.0% | |
| TCTTGTGAAGTAGGGCACGT+TGG | + | chr1.2:69551020-69551039 | None:intergenic | 50.0% | |
| TGAGGGCTGGGTTTACTGTT+AGG | + | chr1.2:69549819-69549838 | None:intergenic | 50.0% | |
| TGAGGGTTGGAGGAGATTGT+AGG | + | chr1.2:69549616-69549635 | None:intergenic | 50.0% | |
| TTACAGCAGCACCAACTGAG+AGG | + | chr1.2:69550243-69550262 | None:intergenic | 50.0% | |
| TTCTATGGCATGCTTCCCTG+TGG | - | chr1.2:69550383-69550402 | MS.gene60605:intron | 50.0% | |
| ! | GATGGGCTCATGAGGTTCTA+TGG | - | chr1.2:69550368-69550387 | MS.gene60605:CDS | 50.0% |
| !! | GTAGGGCTTTAAGGTTGTGG+CGG | + | chr1.2:69549598-69549617 | None:intergenic | 50.0% |
| !!! | GTTGGGGTTGTTTTAGGGGA+AGG | + | chr1.2:69549648-69549667 | None:intergenic | 50.0% |
| !!! | TGGGGTTGTTTTAGGGGAAG+GGG | + | chr1.2:69549646-69549665 | None:intergenic | 50.0% |
| ACTGCACCAAAGCAGAGACC+AGG | + | chr1.2:69550757-69550776 | None:intergenic | 55.0% | |
| AGACCTCATGCATGTGCCAC+AGG | + | chr1.2:69550402-69550421 | None:intergenic | 55.0% | |
| AGGGGAAGGGGAAGAAGTTG+AGG | + | chr1.2:69549634-69549653 | None:intergenic | 55.0% | |
| GAAGTAGGGCACGTTGGCAA+TGG | + | chr1.2:69551014-69551033 | None:intergenic | 55.0% | |
| GACCTCATGCATGTGCCACA+GGG | + | chr1.2:69550401-69550420 | None:intergenic | 55.0% | |
| GCTTGGCTGACATATGGTGC+AGG | - | chr1.2:69551649-69551668 | MS.gene60605:CDS | 55.0% | |
| GGCACATTTGCCCTCTCAGT+TGG | - | chr1.2:69550229-69550248 | MS.gene60605:intron | 55.0% | |
| GGGAAGAAGTTGAGGGTTGG+AGG | + | chr1.2:69549626-69549645 | None:intergenic | 55.0% | |
| GGGCTGGGTTTACTGTTAGG+AGG | + | chr1.2:69549816-69549835 | None:intergenic | 55.0% | |
| GGGGAAGGGGAAGAAGTTGA+GGG | + | chr1.2:69549633-69549652 | None:intergenic | 55.0% | |
| GGGGGTGAAGAACAGTGTTG+GGG | + | chr1.2:69549664-69549683 | None:intergenic | 55.0% | |
| TTCCCTGTGGCACATGCATG+AGG | - | chr1.2:69550396-69550415 | MS.gene60605:intron | 55.0% | |
| ! | TTGGGCTAGATGGGCTCATG+AGG | - | chr1.2:69550360-69550379 | MS.gene60605:CDS | 55.0% |
| ! | TTGGTGCCTGGTCTCTGCTT+TGG | - | chr1.2:69550748-69550767 | MS.gene60605:intron | 55.0% |
| !! | AGGGTAGTGGAGAGGTTCCT+TGG | - | chr1.2:69550194-69550213 | MS.gene60605:intron | 55.0% |
| ACGTTGGCAATGGGACCCAC+AGG | + | chr1.2:69551004-69551023 | None:intergenic | 60.0% | |
| CGTTGGCAATGGGACCCACA+GGG | + | chr1.2:69551003-69551022 | None:intergenic | 60.0% | |
| !! | GGGCTTTAAGGTTGTGGCGG+TGG | + | chr1.2:69549595-69549614 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 69549576 | 69551748 | 69549576 | ID=MS.gene60605 |
| chr1.2 | mRNA | 69549576 | 69551748 | 69549576 | ID=MS.gene60605.t1;Parent=MS.gene60605 |
| chr1.2 | exon | 69551350 | 69551748 | 69551350 | ID=MS.gene60605.t1.exon1;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69551350 | 69551748 | 69551350 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69551066 | 69551128 | 69551066 | ID=MS.gene60605.t1.exon2;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69551066 | 69551128 | 69551066 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69550907 | 69550978 | 69550907 | ID=MS.gene60605.t1.exon3;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69550907 | 69550978 | 69550907 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69550550 | 69550684 | 69550550 | ID=MS.gene60605.t1.exon4;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69550550 | 69550684 | 69550550 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69550267 | 69550392 | 69550267 | ID=MS.gene60605.t1.exon5;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69550267 | 69550392 | 69550267 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69550049 | 69550105 | 69550049 | ID=MS.gene60605.t1.exon6;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69550049 | 69550105 | 69550049 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| chr1.2 | exon | 69549576 | 69549653 | 69549576 | ID=MS.gene60605.t1.exon7;Parent=MS.gene60605.t1 |
| chr1.2 | CDS | 69549576 | 69549653 | 69549576 | ID=cds.MS.gene60605.t1;Parent=MS.gene60605.t1 |
| Gene Sequence |
| Protein sequence |
