Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06490.t1 | XP_003602469.2 | 98.1 | 744 | 14 | 0 | 1 | 744 | 1 | 744 | 0.00E+00 | 1406.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06490.t1 | Q93Y08 | 71.9 | 770 | 181 | 9 | 1 | 744 | 1 | 761 | 3.9e-296 | 1018.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06490.t1 | G7JA88 | 98.1 | 744 | 14 | 0 | 1 | 744 | 1 | 744 | 0.0e+00 | 1406.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene06490 | 0.833135 | 6.35E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene06490 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene06490 | 0.802517 | 5.40E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene06490 | 0.900786 | 5.17E-78 | -1.69E-46 |
| MS.gene049369 | MS.gene06490 | 0.981986 | 6.06E-154 | -1.69E-46 |
| MS.gene049396 | MS.gene06490 | 0.887079 | 1.95E-72 | -1.69E-46 |
| MS.gene049427 | MS.gene06490 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene06490 | 0.85261 | 4.12E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene06490 | 0.806726 | 7.15E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene06490 | 0.845571 | 3.74E-59 | -1.69E-46 |
| MS.gene049828 | MS.gene06490 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene049907 | MS.gene06490 | 0.826212 | 3.07E-54 | -1.69E-46 |
| MS.gene050499 | MS.gene06490 | 0.831209 | 1.90E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene06490 | 0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene050520 | MS.gene06490 | 0.832972 | 6.97E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene06490 | 0.844666 | 6.56E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene06490 | 0.825524 | 4.47E-54 | -1.69E-46 |
| MS.gene050686 | MS.gene06490 | 0.842549 | 2.42E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene06490 | 0.842358 | 2.72E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene06490 | 0.803628 | 3.18E-49 | -1.69E-46 |
| MS.gene050770 | MS.gene06490 | 0.807284 | 5.45E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene06490 | 0.878388 | 2.92E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene06490 | 0.807501 | 4.90E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene06490 | 0.844403 | 7.73E-59 | -1.69E-46 |
| MS.gene050971 | MS.gene06490 | 0.801138 | 1.04E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene06490 | 0.862517 | 4.79E-64 | -1.69E-46 |
| MS.gene051228 | MS.gene06490 | 0.837843 | 4.09E-57 | -1.69E-46 |
| MS.gene051255 | MS.gene06490 | 0.813055 | 3.11E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene06490 | 0.83821 | 3.29E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene06490 | 0.82035 | 7.18E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene06490 | 0.831425 | 1.68E-55 | -1.69E-46 |
| MS.gene051605 | MS.gene06490 | 0.801968 | 7.01E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene06490 | 0.823941 | 1.06E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene06490 | 0.834895 | 2.30E-56 | -1.69E-46 |
| MS.gene051734 | MS.gene06490 | 0.820288 | 7.43E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene06490 | 0.800298 | 1.54E-48 | -1.69E-46 |
| MS.gene051858 | MS.gene06490 | 0.820026 | 8.52E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene06490 | 0.833054 | 6.65E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene06490 | 0.804189 | 2.43E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene06490 | 0.834788 | 2.45E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene06490 | 0.805865 | 1.09E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene06490 | 0.80904 | 2.30E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene06490 | 0.809358 | 1.97E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene06490 | 0.807048 | 6.11E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene06490 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene06490 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene06490 | 0.8626 | 4.52E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene06490 | 0.818006 | 2.46E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene06490 | 0.825893 | 3.66E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene06490 | 0.803721 | 3.04E-49 | -1.69E-46 |
| MS.gene052632 | MS.gene06490 | 0.805637 | 1.21E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene06490 | 0.826986 | 2.01E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene06490 | 0.825996 | 3.46E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene06490 | 0.824876 | 6.36E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene06490 | 0.812656 | 3.80E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene06490 | 0.801502 | 8.74E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene06490 | 0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene06490 | 0.811888 | 5.59E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene06490 | 0.814501 | 1.49E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene06490 | 0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene06490 | 0.841323 | 5.10E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene06490 | 0.832875 | 7.37E-56 | -1.69E-46 |
| MS.gene053384 | MS.gene06490 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene06490 | 0.899699 | 1.53E-77 | -1.69E-46 |
| MS.gene053505 | MS.gene06490 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene06490 | 0.873171 | 1.81E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene06490 | 0.80102 | 1.10E-48 | -1.69E-46 |
| MS.gene053758 | MS.gene06490 | 0.841036 | 6.06E-58 | -1.69E-46 |
| MS.gene053813 | MS.gene06490 | 0.858138 | 1.01E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene06490 | 0.847315 | 1.25E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene06490 | 0.871058 | 9.12E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene06490 | 0.861713 | 8.46E-64 | -1.69E-46 |
| MS.gene054123 | MS.gene06490 | 0.823503 | 1.34E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene06490 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene06490 | 0.809018 | 2.33E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene06490 | 0.816649 | 4.96E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene06490 | 0.8592 | 4.88E-63 | -1.69E-46 |
| MS.gene054955 | MS.gene06490 | 0.80428 | 2.33E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene06490 | 0.895171 | 1.23E-75 | -1.69E-46 |
| MS.gene055116 | MS.gene06490 | 0.832812 | 7.63E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene06490 | 0.829805 | 4.19E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene06490 | 0.870319 | 1.60E-66 | -1.69E-46 |
| MS.gene055289 | MS.gene06490 | 0.825151 | 5.48E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene06490 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene06490 | 0.803277 | 3.76E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene06490 | 0.878869 | 1.98E-69 | -1.69E-46 |
| MS.gene055741 | MS.gene06490 | 0.833647 | 4.73E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene06490 | 0.826441 | 2.71E-54 | -1.69E-46 |
| MS.gene055802 | MS.gene06490 | 0.823329 | 1.47E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene06490 | 0.876449 | 1.38E-68 | -1.69E-46 |
| MS.gene055911 | MS.gene06490 | 0.871109 | 8.78E-67 | -1.69E-46 |
| MS.gene05592 | MS.gene06490 | 0.857424 | 1.65E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene06490 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene06490 | 0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene06490 | 0.830566 | 2.73E-55 | -1.69E-46 |
| MS.gene056422 | MS.gene06490 | 0.882741 | 8.08E-71 | -1.69E-46 |
| MS.gene056448 | MS.gene06490 | 0.836656 | 8.23E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene06490 | 0.831764 | 1.39E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene06490 | 0.891815 | 2.81E-74 | -1.69E-46 |
| MS.gene056549 | MS.gene06490 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene06490 | 0.833374 | 5.53E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene06490 | 0.83102 | 2.11E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene06490 | 0.823949 | 1.05E-53 | -1.69E-46 |
| MS.gene05666 | MS.gene06490 | 0.852035 | 6.01E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene06490 | 0.835909 | 1.28E-56 | -1.69E-46 |
| MS.gene056947 | MS.gene06490 | 0.815796 | 7.70E-52 | -1.69E-46 |
| MS.gene057019 | MS.gene06490 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene06490 | 0.874727 | 5.39E-68 | -1.69E-46 |
| MS.gene057086 | MS.gene06490 | 0.817773 | 2.77E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene06490 | 0.82283 | 1.92E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene06490 | 0.81811 | 2.33E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene06490 | 0.803316 | 3.70E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene06490 | 0.857167 | 1.96E-62 | -1.69E-46 |
| MS.gene05735 | MS.gene06490 | 0.848729 | 5.09E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene06490 | 0.834337 | 3.18E-56 | -1.69E-46 |
| MS.gene057537 | MS.gene06490 | 0.831656 | 1.48E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene06490 | 0.886871 | 2.34E-72 | -1.69E-46 |
| MS.gene057856 | MS.gene06490 | 0.818247 | 2.17E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene06490 | 0.878853 | 2.01E-69 | -1.69E-46 |
| MS.gene057927 | MS.gene06490 | 0.820328 | 7.27E-53 | -1.69E-46 |
| MS.gene058007 | MS.gene06490 | 0.843831 | 1.10E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene06490 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene05806 | MS.gene06490 | 0.803332 | 3.67E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene06490 | 0.8567 | 2.69E-62 | -1.69E-46 |
| MS.gene058090 | MS.gene06490 | 0.809246 | 2.08E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene06490 | 0.868192 | 7.84E-66 | -1.69E-46 |
| MS.gene058130 | MS.gene06490 | 0.827874 | 1.23E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene06490 | 0.830276 | 3.22E-55 | -1.69E-46 |
| MS.gene058376 | MS.gene06490 | 0.813134 | 2.98E-51 | -1.69E-46 |
| MS.gene058459 | MS.gene06490 | 0.872624 | 2.76E-67 | -1.69E-46 |
| MS.gene058700 | MS.gene06490 | 0.825356 | 4.90E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene06490 | 0.813013 | 3.17E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene06490 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene058790 | MS.gene06490 | 0.815271 | 1.01E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene06490 | 0.844958 | 5.47E-59 | -1.69E-46 |
| MS.gene058948 | MS.gene06490 | 0.865959 | 4.05E-65 | -1.69E-46 |
| MS.gene05913 | MS.gene06490 | 0.864918 | 8.60E-65 | -1.69E-46 |
| MS.gene059305 | MS.gene06490 | 0.851016 | 1.17E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene06490 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene06490 | 0.836477 | 9.15E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene06490 | 0.821237 | 4.49E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene06490 | 0.838515 | 2.75E-57 | -1.69E-46 |
| MS.gene059455 | MS.gene06490 | 0.825825 | 3.80E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene06490 | 0.834351 | 3.15E-56 | -1.69E-46 |
| MS.gene05959 | MS.gene06490 | 0.815473 | 9.08E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene06490 | 0.886392 | 3.56E-72 | -1.69E-46 |
| MS.gene059676 | MS.gene06490 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene06490 | 0.832211 | 1.08E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene06490 | 0.855441 | 6.30E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene06490 | 0.836047 | 1.18E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene06490 | 0.839075 | 1.97E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene06490 | 0.891345 | 4.32E-74 | -1.69E-46 |
| MS.gene059718 | MS.gene06490 | 0.813573 | 2.39E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene06490 | 0.800045 | 1.73E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene06490 | 0.905657 | 3.41E-80 | -1.69E-46 |
| MS.gene05986 | MS.gene06490 | 0.85186 | 6.74E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene06490 | 0.809712 | 1.65E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene06490 | 0.805804 | 1.12E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene06490 | 0.827733 | 1.33E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene06490 | 0.846172 | 2.57E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene06490 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene06490 | 0.825878 | 3.69E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene06490 | 0.8096 | 1.75E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene06490 | 0.869206 | 3.68E-66 | -1.69E-46 |
| MS.gene060818 | MS.gene06490 | 0.860535 | 1.93E-63 | -1.69E-46 |
| MS.gene060835 | MS.gene06490 | 0.865772 | 4.63E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene06490 | 0.908537 | 1.53E-81 | -1.69E-46 |
| MS.gene06097 | MS.gene06490 | 0.880551 | 5.00E-70 | -1.69E-46 |
| MS.gene060981 | MS.gene06490 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene061041 | MS.gene06490 | 0.886796 | 2.50E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene06490 | -0.822396 | 2.42E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene06490 | 0.809471 | 1.86E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene06490 | 0.826074 | 3.31E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene06490 | 0.837619 | 4.67E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06490.t1 | MTR_3g094740 | 98.522 | 744 | 11 | 0 | 1 | 744 | 1 | 744 | 0.0 | 1497 |
| MS.gene06490.t1 | MTR_3g094740 | 98.166 | 709 | 13 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1422 |
| MS.gene06490.t1 | MTR_8g091710 | 84.647 | 736 | 99 | 5 | 12 | 744 | 11 | 735 | 0.0 | 1259 |
| MS.gene06490.t1 | MTR_3g082750 | 46.281 | 605 | 284 | 9 | 143 | 740 | 138 | 708 | 0.0 | 539 |
| MS.gene06490.t1 | MTR_4g026450 | 33.628 | 452 | 256 | 9 | 188 | 631 | 140 | 555 | 1.07e-73 | 253 |
| MS.gene06490.t1 | MTR_0053s0030 | 34.304 | 481 | 265 | 11 | 160 | 631 | 105 | 543 | 3.24e-73 | 252 |
| MS.gene06490.t1 | MTR_6g038750 | 34.398 | 407 | 220 | 9 | 204 | 606 | 129 | 492 | 2.21e-66 | 233 |
| MS.gene06490.t1 | MTR_1g009860 | 31.967 | 488 | 282 | 10 | 153 | 631 | 89 | 535 | 1.59e-64 | 226 |
| MS.gene06490.t1 | MTR_1g009860 | 31.622 | 487 | 285 | 9 | 153 | 631 | 89 | 535 | 4.57e-64 | 226 |
| MS.gene06490.t1 | MTR_3g105760 | 34.491 | 403 | 217 | 10 | 219 | 608 | 136 | 504 | 1.58e-63 | 225 |
| MS.gene06490.t1 | MTR_1g095480 | 33.405 | 464 | 251 | 11 | 188 | 630 | 187 | 613 | 8.56e-60 | 213 |
| MS.gene06490.t1 | MTR_1g095480 | 34.917 | 421 | 224 | 9 | 207 | 611 | 203 | 589 | 1.17e-58 | 213 |
| MS.gene06490.t1 | MTR_1g046620 | 31.494 | 435 | 250 | 10 | 183 | 606 | 155 | 552 | 5.95e-54 | 199 |
| MS.gene06490.t1 | MTR_1g008980 | 29.139 | 453 | 255 | 10 | 185 | 611 | 22 | 434 | 1.31e-48 | 184 |
| MS.gene06490.t1 | MTR_4g104070 | 31.235 | 413 | 234 | 11 | 214 | 611 | 78 | 455 | 1.95e-47 | 176 |
| MS.gene06490.t1 | MTR_5g068050 | 28.148 | 405 | 270 | 8 | 206 | 601 | 127 | 519 | 3.04e-46 | 173 |
| MS.gene06490.t1 | MTR_5g077080 | 34.307 | 274 | 171 | 5 | 218 | 488 | 98 | 365 | 4.59e-46 | 173 |
| MS.gene06490.t1 | MTR_3g070410 | 32.155 | 283 | 170 | 6 | 204 | 469 | 87 | 364 | 1.08e-37 | 149 |
| MS.gene06490.t1 | MTR_8g464860 | 28.302 | 318 | 203 | 6 | 200 | 495 | 203 | 517 | 1.09e-30 | 128 |
| MS.gene06490.t1 | MTR_2g011640 | 29.605 | 304 | 188 | 7 | 200 | 483 | 262 | 559 | 8.93e-29 | 123 |
| MS.gene06490.t1 | MTR_4g091510 | 29.316 | 307 | 188 | 8 | 200 | 483 | 209 | 509 | 1.43e-28 | 122 |
| MS.gene06490.t1 | MTR_4g091510 | 29.316 | 307 | 188 | 8 | 200 | 483 | 214 | 514 | 1.63e-28 | 122 |
| MS.gene06490.t1 | MTR_1g085610 | 28.620 | 297 | 202 | 6 | 204 | 498 | 227 | 515 | 2.62e-24 | 108 |
| MS.gene06490.t1 | MTR_0224s0030 | 26.728 | 217 | 123 | 5 | 401 | 611 | 19 | 205 | 4.62e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06490.t1 | AT5G64940 | 79.809 | 733 | 127 | 8 | 23 | 744 | 39 | 761 | 0.0 | 1132 |
| MS.gene06490.t1 | AT5G64940 | 79.809 | 733 | 127 | 8 | 23 | 744 | 39 | 761 | 0.0 | 1132 |
| MS.gene06490.t1 | AT3G07700 | 45.521 | 681 | 298 | 16 | 71 | 740 | 77 | 695 | 0.0 | 553 |
| MS.gene06490.t1 | AT3G07700 | 45.521 | 681 | 298 | 16 | 71 | 740 | 77 | 695 | 0.0 | 553 |
| MS.gene06490.t1 | AT3G07700 | 45.521 | 681 | 298 | 16 | 71 | 740 | 77 | 695 | 0.0 | 553 |
| MS.gene06490.t1 | AT3G07700 | 44.913 | 688 | 321 | 17 | 71 | 740 | 77 | 724 | 0.0 | 549 |
| MS.gene06490.t1 | AT1G79600 | 33.267 | 499 | 278 | 11 | 156 | 645 | 108 | 560 | 6.13e-76 | 259 |
| MS.gene06490.t1 | AT5G24970 | 33.623 | 461 | 240 | 10 | 200 | 631 | 134 | 557 | 2.61e-71 | 247 |
| MS.gene06490.t1 | AT5G24970 | 33.623 | 461 | 240 | 10 | 200 | 631 | 173 | 596 | 8.56e-71 | 246 |
| MS.gene06490.t1 | AT4G31390 | 28.992 | 645 | 373 | 17 | 49 | 671 | 19 | 600 | 5.12e-69 | 240 |
| MS.gene06490.t1 | AT5G24970 | 33.189 | 461 | 239 | 11 | 200 | 631 | 134 | 554 | 2.01e-67 | 236 |
| MS.gene06490.t1 | AT1G71810 | 34.266 | 429 | 234 | 11 | 185 | 606 | 96 | 483 | 2.70e-67 | 235 |
| MS.gene06490.t1 | AT3G24190 | 33.718 | 433 | 239 | 13 | 195 | 616 | 181 | 576 | 1.81e-58 | 213 |
| MS.gene06490.t1 | AT4G31390 | 27.132 | 645 | 360 | 18 | 49 | 671 | 19 | 575 | 1.56e-56 | 205 |
| MS.gene06490.t1 | AT4G31390 | 30.856 | 444 | 255 | 9 | 237 | 671 | 1 | 401 | 8.44e-56 | 199 |
| MS.gene06490.t1 | AT2G39190 | 34.038 | 426 | 224 | 11 | 207 | 611 | 202 | 591 | 6.48e-55 | 202 |
| MS.gene06490.t1 | AT5G24810 | 28.667 | 450 | 279 | 7 | 185 | 611 | 69 | 499 | 6.31e-49 | 186 |
| MS.gene06490.t1 | AT1G65950 | 35.106 | 282 | 174 | 6 | 218 | 496 | 113 | 388 | 1.48e-48 | 178 |
| MS.gene06490.t1 | AT1G65950 | 35.106 | 282 | 174 | 6 | 218 | 496 | 113 | 388 | 9.95e-48 | 178 |
| MS.gene06490.t1 | AT5G24810 | 27.027 | 481 | 278 | 8 | 185 | 611 | 69 | 530 | 2.36e-44 | 172 |
| MS.gene06490.t1 | AT5G50330 | 35.000 | 300 | 168 | 9 | 214 | 496 | 75 | 364 | 1.17e-42 | 162 |
| MS.gene06490.t1 | AT5G05200 | 25.917 | 436 | 294 | 9 | 179 | 601 | 101 | 520 | 4.90e-42 | 161 |
| MS.gene06490.t1 | AT4G24810 | 33.333 | 300 | 173 | 9 | 214 | 496 | 32 | 321 | 1.42e-41 | 158 |
| MS.gene06490.t1 | AT4G24810 | 33.333 | 300 | 173 | 9 | 214 | 496 | 32 | 321 | 1.42e-41 | 158 |
| MS.gene06490.t1 | AT4G24810 | 32.667 | 300 | 175 | 9 | 214 | 496 | 75 | 364 | 4.31e-41 | 157 |
| MS.gene06490.t1 | AT4G24810 | 33.673 | 294 | 168 | 9 | 214 | 490 | 32 | 315 | 5.70e-41 | 153 |
| MS.gene06490.t1 | AT4G24810 | 34.276 | 283 | 157 | 10 | 214 | 477 | 32 | 304 | 6.10e-40 | 150 |
| MS.gene06490.t1 | AT4G24810 | 32.573 | 307 | 173 | 10 | 214 | 496 | 32 | 328 | 4.40e-39 | 150 |
| MS.gene06490.t1 | AT2G40090 | 32.155 | 283 | 170 | 7 | 204 | 469 | 89 | 366 | 1.66e-36 | 145 |
| MS.gene06490.t1 | AT5G50330 | 31.879 | 298 | 164 | 9 | 214 | 496 | 75 | 348 | 1.00e-34 | 138 |
| MS.gene06490.t1 | AT2G39190 | 48.765 | 162 | 74 | 4 | 207 | 365 | 202 | 357 | 4.01e-32 | 129 |
| MS.gene06490.t1 | AT1G11390 | 29.642 | 307 | 186 | 9 | 200 | 483 | 209 | 508 | 6.63e-31 | 129 |
| MS.gene06490.t1 | AT1G61640 | 28.333 | 300 | 185 | 7 | 207 | 483 | 213 | 505 | 8.32e-29 | 122 |
| MS.gene06490.t1 | AT1G61640 | 28.333 | 300 | 185 | 7 | 207 | 483 | 213 | 505 | 1.05e-28 | 122 |
| MS.gene06490.t1 | AT4G01660 | 27.966 | 354 | 235 | 9 | 168 | 511 | 181 | 524 | 1.57e-25 | 112 |
| MS.gene06490.t1 | AT1G61640 | 28.922 | 204 | 125 | 5 | 207 | 397 | 213 | 409 | 2.17e-18 | 89.4 |
Find 182 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCCTACATTCATTAAAAT+TGG | 0.114774 | 3.2:-79211395 | MS.gene06490:CDS |
| TCCAGAGAACCTTAGAAATT+TGG | 0.122083 | 3.2:-79211972 | MS.gene06490:CDS |
| TATGTCTTCTGTGCATTCTT+TGG | 0.233195 | 3.2:-79201255 | MS.gene06490:CDS |
| CCAGAGAACCTTAGAAATTT+GGG | 0.238920 | 3.2:-79211971 | MS.gene06490:CDS |
| CAGCACAATTCTTTCTTAAC+AGG | 0.251108 | 3.2:-79205459 | MS.gene06490:intron |
| AACAAATCCCCAAATTTCTA+AGG | 0.269782 | 3.2:+79211963 | None:intergenic |
| TGTTGTAACCTTCATCTCTA+AGG | 0.282862 | 3.2:-79211944 | MS.gene06490:CDS |
| CCCAAATTTCTAAGGTTCTC+TGG | 0.304189 | 3.2:+79211971 | None:intergenic |
| AGATTGATCTTCTACGATTT+CGG | 0.307366 | 3.2:-79205882 | MS.gene06490:CDS |
| TCACATTTCCTATAGTCTTC+TGG | 0.314553 | 3.2:+79202129 | None:intergenic |
| TTAAAAGCATCTACCCTATC+TGG | 0.314966 | 3.2:+79205659 | None:intergenic |
| AGCAAGCCTTCTCGGATGTT+TGG | 0.323680 | 3.2:+79205713 | None:intergenic |
| AACGGAAGTTCAGTAAAATA+TGG | 0.325287 | 3.2:-79212447 | MS.gene06490:CDS |
| AGGGGTTGAAGTTGTCTTAA+AGG | 0.328153 | 3.2:-79202518 | MS.gene06490:intron |
| CCAAGACTTGCAGCAGCTAT+TGG | 0.332297 | 3.2:+79210123 | None:intergenic |
| GCCTCCCGTGCCGGCCGTAA+TGG | 0.333465 | 3.2:-79212501 | MS.gene06490:CDS |
| CTCTTTGCACCATCTGACTT+TGG | 0.338959 | 3.2:+79208785 | None:intergenic |
| TGACCAGTTGTCTGAACTTC+AGG | 0.347903 | 3.2:-79211327 | MS.gene06490:intron |
| TGGAGAAAGGAAATGGAGTT+CGG | 0.349568 | 3.2:+79212683 | None:intergenic |
| TATCCAACAATACCAGTCTT+TGG | 0.357561 | 3.2:+79202323 | None:intergenic |
| ATGTCTCAAGCAAGCCTTCT+CGG | 0.365202 | 3.2:+79205705 | None:intergenic |
| TCTTCAATCAATGATTCAAA+TGG | 0.368828 | 3.2:-79205524 | MS.gene06490:CDS |
| ATATGCAGTTGAATCGTTCT+TGG | 0.373273 | 3.2:-79207321 | MS.gene06490:CDS |
| AAAAGAAGGTTGGAGGAGAT+TGG | 0.383706 | 3.2:-79212354 | MS.gene06490:CDS |
| TGAAAGTTCCTTCAATCTAC+TGG | 0.383995 | 3.2:-79207676 | MS.gene06490:CDS |
| TGGCAGGTAGCCGTTGCTCC+TGG | 0.389844 | 3.2:-79212030 | MS.gene06490:intron |
| AAGACATATGCTGCAATTGC+AGG | 0.402180 | 3.2:+79201270 | None:intergenic |
| GAGGAAGCAACAGGCGAACT+TGG | 0.404262 | 3.2:-79203446 | MS.gene06490:CDS |
| CTGACAATGGAATATGTTCC+AGG | 0.404562 | 3.2:-79207525 | MS.gene06490:CDS |
| AAACAACGTCTAGCTGCTAT+TGG | 0.409897 | 3.2:-79203380 | MS.gene06490:intron |
| GGTGGATGTTGAAGCTTCTA+AGG | 0.411175 | 3.2:-79212394 | MS.gene06490:CDS |
| CTTCTACGATTTCGGAATGA+TGG | 0.414192 | 3.2:-79205874 | MS.gene06490:CDS |
| TCATCAACTGCAATATTTCC+AGG | 0.416229 | 3.2:+79205918 | None:intergenic |
| CAGATGGTGCAAAGAGGGAT+TGG | 0.418992 | 3.2:-79208778 | MS.gene06490:CDS |
| AAAGAGAAAGAGGAAGCAAC+AGG | 0.419275 | 3.2:-79203455 | MS.gene06490:CDS |
| TATGTTAACGGCGCCGTTAA+CGG | 0.419710 | 3.2:-79212465 | MS.gene06490:CDS |
| GTTATGCTCTAGAGTTACTA+AGG | 0.420171 | 3.2:-79202552 | MS.gene06490:CDS |
| TGATTTGTGGAGAAAGGAAA+TGG | 0.420740 | 3.2:+79212676 | None:intergenic |
| ATGTGCCTCTGTCTTATATC+AGG | 0.422634 | 3.2:-79208738 | MS.gene06490:intron |
| GTCCTACATTCATTAAAATT+GGG | 0.424402 | 3.2:-79211394 | MS.gene06490:CDS |
| TTTCATCAGACCAACCCTTC+CGG | 0.424802 | 3.2:-79202863 | MS.gene06490:CDS |
| GAAGGGTTGGTCTGATGAAA+TGG | 0.426741 | 3.2:+79202866 | None:intergenic |
| TTACCTGAAGTTCAGACAAC+TGG | 0.434709 | 3.2:+79211324 | None:intergenic |
| GACCCTTGCCAAGTGGCTTA+AGG | 0.434972 | 3.2:-79211435 | MS.gene06490:CDS |
| AAAGCACTCTCAGAGGGAAA+TGG | 0.437529 | 3.2:+79210210 | None:intergenic |
| TTACTAAGGTTTCGTGAGGC+AGG | 0.438500 | 3.2:-79202538 | MS.gene06490:CDS |
| GAAACGGAGCGATTGATAAC+AGG | 0.439017 | 3.2:-79201189 | MS.gene06490:CDS |
| TAACCTTCATCTCTAAGGCT+TGG | 0.439667 | 3.2:-79211939 | MS.gene06490:CDS |
| ACTTATTTAGGCAGGCTGAC+AGG | 0.440959 | 3.2:-79202369 | MS.gene06490:CDS |
| GGAGAAAGGAAATGGAGTTC+GGG | 0.441660 | 3.2:+79212684 | None:intergenic |
| AAATTGTCGCAAGATTTATT+AGG | 0.447499 | 3.2:+79201457 | None:intergenic |
| AATTCACAGGCAGTAGCTGC+TGG | 0.451396 | 3.2:-79201483 | MS.gene06490:intron |
| TCTACAGTGTTGGATGGCAT+TGG | 0.452943 | 3.2:-79202726 | MS.gene06490:intron |
| GGAGGTGGAAAAGCGGGAAA+TGG | 0.457956 | 3.2:+79212620 | None:intergenic |
| ATGTAAATGTAGCAGGAAAC+CGG | 0.462439 | 3.2:+79202844 | None:intergenic |
| CTTCATCTCTAAGGCTTGGT+TGG | 0.464165 | 3.2:-79211935 | MS.gene06490:CDS |
| AACGGAGTTGCCTCCCGTGC+CGG | 0.466727 | 3.2:-79212510 | MS.gene06490:CDS |
| CCAATAGCTGCTGCAAGTCT+TGG | 0.469773 | 3.2:-79210123 | MS.gene06490:intron |
| GCTATTGTTGAAGAAGAGCT+TGG | 0.471116 | 3.2:-79210186 | MS.gene06490:CDS |
| CCGGAGATATGACTGCTGTT+AGG | 0.472270 | 3.2:-79205486 | MS.gene06490:CDS |
| TTCCTTAAGCCACTTGGCAA+GGG | 0.473979 | 3.2:+79211433 | None:intergenic |
| GGTTCATCGCGCAAGATTGA+AGG | 0.476419 | 3.2:-79209172 | MS.gene06490:CDS |
| AGTTCAGTAAAATATGGAAA+TGG | 0.477517 | 3.2:-79212441 | MS.gene06490:CDS |
| GGAGAGTGATTTGTGGAGAA+AGG | 0.479736 | 3.2:+79212670 | None:intergenic |
| TCTATGAGAAGGATCCAGAT+AGG | 0.480245 | 3.2:-79205673 | MS.gene06490:CDS |
| GACGTGGAATGGAGCGGAAA+CGG | 0.480749 | 3.2:-79212528 | MS.gene06490:CDS |
| AATCAGAAGTTCTCTTACAA+AGG | 0.481576 | 3.2:-79211910 | MS.gene06490:intron |
| CTGCTCCATTACGGCCGGCA+CGG | 0.481659 | 3.2:+79212496 | None:intergenic |
| AACGAGTTAACGACGTGGAA+TGG | 0.482769 | 3.2:-79212539 | MS.gene06490:CDS |
| AAGGAAAGCATCCTGAGATT+AGG | 0.484437 | 3.2:-79211416 | MS.gene06490:CDS |
| TTCTACGATTTCGGAATGAT+GGG | 0.485023 | 3.2:-79205873 | MS.gene06490:CDS |
| GGATGGAAGGAAAAGAAGGT+TGG | 0.485863 | 3.2:-79212364 | MS.gene06490:CDS |
| GCCGGCCGTAATGGAGCAGC+AGG | 0.486448 | 3.2:-79212492 | MS.gene06490:CDS |
| TTTGTTGTTAGAGCTTTCTC+AGG | 0.486511 | 3.2:-79202822 | MS.gene06490:intron |
| CTTCAATCAATGATTCAAAT+GGG | 0.489171 | 3.2:-79205523 | MS.gene06490:CDS |
| GGTCAAGAAGCTAGATGAAA+CGG | 0.489626 | 3.2:-79201205 | MS.gene06490:CDS |
| GACATTGGAGGTGGAAAAGC+GGG | 0.490015 | 3.2:+79212614 | None:intergenic |
| GCAGCAGGAGGTTATGTTAA+CGG | 0.490223 | 3.2:-79212477 | MS.gene06490:CDS |
| GTAAAATATGGAAATGGAAA+CGG | 0.490999 | 3.2:-79212435 | MS.gene06490:CDS |
| AACCTCCTGCTGCTCCATTA+CGG | 0.492731 | 3.2:+79212487 | None:intergenic |
| GCCACAGTCCAGAAGACTAT+AGG | 0.493900 | 3.2:-79202137 | MS.gene06490:CDS |
| TGCTTCAATTATCCAAAGAC+TGG | 0.494513 | 3.2:-79202335 | MS.gene06490:intron |
| CTTATTTAGGCAGGCTGACA+GGG | 0.497329 | 3.2:-79202368 | MS.gene06490:CDS |
| ACATTATTCCTGCAGCATCC+TGG | 0.497445 | 3.2:-79205936 | MS.gene06490:intron |
| GTTGTTAAAGTGCAAAGGCC+TGG | 0.497461 | 3.2:-79209138 | MS.gene06490:CDS |
| TGGAAACGGTGTAGCTTCTA+CGG | 0.502323 | 3.2:-79212421 | MS.gene06490:CDS |
| CAACCAAGCCTTAGAGATGA+AGG | 0.503211 | 3.2:+79211936 | None:intergenic |
| CAGATTCTAAAGTTCGAACT+CGG | 0.506790 | 3.2:+79202180 | None:intergenic |
| TGCTCCATTACGGCCGGCAC+GGG | 0.507949 | 3.2:+79212497 | None:intergenic |
| GTGTTGGATGGCATTGGAAA+GGG | 0.508531 | 3.2:-79202720 | MS.gene06490:CDS |
| TGGAAGGAAAAGAAGGTTGG+AGG | 0.509287 | 3.2:-79212361 | MS.gene06490:CDS |
| AGTGCTCTTGGGCATTGTAA+AGG | 0.509654 | 3.2:-79201226 | MS.gene06490:CDS |
| AGATGGTGCAAAGAGGGATT+GGG | 0.510352 | 3.2:-79208777 | MS.gene06490:CDS |
| ACAACAAATGTAAATGTAGC+AGG | 0.511391 | 3.2:+79202837 | None:intergenic |
| ATGGGTGTTCTTGTTCCTAC+CGG | 0.515413 | 3.2:-79205505 | MS.gene06490:CDS |
| TTTCCTTAAGCCACTTGGCA+AGG | 0.517821 | 3.2:+79211432 | None:intergenic |
| AGTGCAAAGGCCTGGTCTCA+AGG | 0.521155 | 3.2:-79209130 | MS.gene06490:CDS |
| TGAATGTAGGACCTAATCTC+AGG | 0.522099 | 3.2:+79211405 | None:intergenic |
| TTCGAACTTTAGAATCTGAA+AGG | 0.526746 | 3.2:-79202175 | MS.gene06490:CDS |
| TCAGGAGATCGATTACACTA+AGG | 0.527028 | 3.2:-79207750 | MS.gene06490:intron |
| AATCTACTCCAACGACCTCC+AGG | 0.529783 | 3.2:+79212012 | None:intergenic |
| AGGAAGAATGTCCACTCTAG+TGG | 0.530351 | 3.2:+79211361 | None:intergenic |
| TACTAAGGTTTCGTGAGGCA+GGG | 0.531254 | 3.2:-79202537 | MS.gene06490:CDS |
| CGGTTGCGGAGAGTGATTTG+TGG | 0.531780 | 3.2:+79212663 | None:intergenic |
| ACTAAGGTTTCGTGAGGCAG+GGG | 0.532673 | 3.2:-79202536 | MS.gene06490:CDS |
| TACAGGATTTCACTAAGAGA+TGG | 0.532695 | 3.2:-79202417 | MS.gene06490:intron |
| CGGTGTAGCTTCTACGGTGG+TGG | 0.533462 | 3.2:-79212415 | MS.gene06490:CDS |
| AACTTGGTGTTGATCGCGCA+AGG | 0.538572 | 3.2:-79207470 | MS.gene06490:intron |
| TGCACAAAGAAAAGAGAAAG+AGG | 0.541639 | 3.2:-79203465 | MS.gene06490:CDS |
| TCGCGCAAGATTGAAGGGAC+AGG | 0.547008 | 3.2:-79209166 | MS.gene06490:CDS |
| GCTTCTAAGGTGAACGAGGA+TGG | 0.547097 | 3.2:-79212381 | MS.gene06490:CDS |
| TCCATTACGGCCGGCACGGG+AGG | 0.547209 | 3.2:+79212500 | None:intergenic |
| TCGAACTTTAGAATCTGAAA+GGG | 0.551551 | 3.2:-79202174 | MS.gene06490:CDS |
| ACGAGGATGGAAGGAAAAGA+AGG | 0.553901 | 3.2:-79212368 | MS.gene06490:CDS |
| GATGCTTTCCTTAAGCCACT+TGG | 0.554299 | 3.2:+79211427 | None:intergenic |
| TCCAATGCAGATTCTGACAA+TGG | 0.554670 | 3.2:-79207538 | MS.gene06490:intron |
| TGTAGCTTCTACGGTGGTGG+TGG | 0.557388 | 3.2:-79212412 | MS.gene06490:CDS |
| AAAGTCAGATGGTGCAAAGA+GGG | 0.557547 | 3.2:-79208783 | MS.gene06490:CDS |
| GTATAATCCCAGTAGATTGA+AGG | 0.558199 | 3.2:+79207668 | None:intergenic |
| TCCTGCTGCTCCATTACGGC+CGG | 0.565330 | 3.2:+79212491 | None:intergenic |
| GCAAACTCACAGGGTCAGCA+TGG | 0.566152 | 3.2:+79207273 | None:intergenic |
| GAAAGTTCCTTCAATCTACT+GGG | 0.566373 | 3.2:-79207675 | MS.gene06490:CDS |
| TAATGTCAAAACGTGGGTCA+AGG | 0.572785 | 3.2:+79202697 | None:intergenic |
| ACAGGATTTCACTAAGAGAT+GGG | 0.573597 | 3.2:-79202416 | MS.gene06490:intron |
| CTATGAGAAGGATCCAGATA+GGG | 0.574330 | 3.2:-79205672 | MS.gene06490:intron |
| CCGTTGCTCCTGGAGGTCGT+TGG | 0.574360 | 3.2:-79212020 | MS.gene06490:CDS |
| GGGTAGGTGAAGAAGAGAAG+AGG | 0.578943 | 3.2:+79212704 | None:intergenic |
| CAGAGAACCTTAGAAATTTG+GGG | 0.579220 | 3.2:-79211970 | MS.gene06490:CDS |
| AAAATTGATCCAAAGTCAGA+TGG | 0.579221 | 3.2:-79208794 | MS.gene06490:CDS |
| CCTAACAGCAGTCATATCTC+CGG | 0.580070 | 3.2:+79205486 | None:intergenic |
| CTAAGGTGAACGAGGATGGA+AGG | 0.580080 | 3.2:-79212377 | MS.gene06490:CDS |
| TAGCAGGAAACCGGAAGGGT+TGG | 0.581304 | 3.2:+79202853 | None:intergenic |
| GAAGAGCTTGGAGCTTCTGT+AGG | 0.582378 | 3.2:-79210174 | MS.gene06490:CDS |
| GTTAACTCGTTCTGCTATCG+CGG | 0.584474 | 3.2:+79212551 | None:intergenic |
| GTTCATCGCGCAAGATTGAA+GGG | 0.586091 | 3.2:-79209171 | MS.gene06490:CDS |
| TCTGGACTGTGGCAACACGC+TGG | 0.586832 | 3.2:+79202147 | None:intergenic |
| AGTGTTGGATGGCATTGGAA+AGG | 0.588171 | 3.2:-79202721 | MS.gene06490:CDS |
| AGCGCGTGGAGAAAGATAAA+CGG | 0.589459 | 3.2:+79212643 | None:intergenic |
| CTGGGATTATACCACGCCAC+AGG | 0.590597 | 3.2:-79207657 | MS.gene06490:intron |
| ATACAAGCTTTAGATCAACT+TGG | 0.592876 | 3.2:-79207486 | MS.gene06490:CDS |
| GGCCGTAATGGAGCAGCAGG+AGG | 0.594343 | 3.2:-79212489 | MS.gene06490:CDS |
| AGGTTGTTGTTAAAGTGCAA+AGG | 0.597334 | 3.2:-79209143 | MS.gene06490:CDS |
| TCCTATAGTCTTCTGGACTG+TGG | 0.599186 | 3.2:+79202136 | None:intergenic |
| ATAGCTAAAGCACTCTCAGA+GGG | 0.599225 | 3.2:+79210204 | None:intergenic |
| GCGAAGAGTGACATTGGAGG+TGG | 0.599439 | 3.2:+79212605 | None:intergenic |
| AAAGGAAATGGAGTTCGGGT+AGG | 0.601045 | 3.2:+79212688 | None:intergenic |
| TGTGGCGCGAAGAGTGACAT+TGG | 0.606883 | 3.2:+79212599 | None:intergenic |
| AAAGCGGGAAATGGAGCGCG+TGG | 0.609580 | 3.2:+79212629 | None:intergenic |
| ATCAGTCCAAACATCCGAGA+AGG | 0.612144 | 3.2:-79205719 | MS.gene06490:CDS |
| ATCTCAGTAATGTCAAAACG+TGG | 0.613074 | 3.2:+79202690 | None:intergenic |
| TGGAGAAAGATAAACGGTTG+CGG | 0.619686 | 3.2:+79212649 | None:intergenic |
| CAGGTAGCCGTTGCTCCTGG+AGG | 0.621130 | 3.2:-79212027 | MS.gene06490:CDS |
| CAAAGTCAGATGGTGCAAAG+AGG | 0.627900 | 3.2:-79208784 | MS.gene06490:CDS |
| GCACTCTCAGAGGGAAATGG+AGG | 0.630249 | 3.2:+79210213 | None:intergenic |
| ATTGCAGTTGATGATGTCAA+TGG | 0.630718 | 3.2:-79205909 | MS.gene06490:CDS |
| GTTAACGACGTGGAATGGAG+CGG | 0.632091 | 3.2:-79212534 | MS.gene06490:CDS |
| AAATGTAGCAGGAAACCGGA+AGG | 0.632500 | 3.2:+79202848 | None:intergenic |
| TGACATTGGAGGTGGAAAAG+CGG | 0.634527 | 3.2:+79212613 | None:intergenic |
| AATAGCTAAAGCACTCTCAG+AGG | 0.637182 | 3.2:+79210203 | None:intergenic |
| CGCAAGATTGAAGGGACAGG+AGG | 0.637909 | 3.2:-79209163 | MS.gene06490:CDS |
| GGCGGAAGACCCTTGCCAAG+TGG | 0.644021 | 3.2:-79211442 | MS.gene06490:CDS |
| GCAGCAGTTCTCCACTAGAG+TGG | 0.644408 | 3.2:-79211372 | MS.gene06490:CDS |
| AACTGGTCAACATATTCTTG+AGG | 0.645528 | 3.2:+79211341 | None:intergenic |
| GGAGATCGATTACACTAAGG+AGG | 0.645786 | 3.2:-79207747 | MS.gene06490:CDS |
| ACGATTTCGGAATGATGGGG+AGG | 0.653768 | 3.2:-79205869 | MS.gene06490:intron |
| TCTACGATTTCGGAATGATG+GGG | 0.654475 | 3.2:-79205872 | MS.gene06490:CDS |
| AGAGTTACTAAGGTTTCGTG+AGG | 0.656865 | 3.2:-79202542 | MS.gene06490:CDS |
| AGATTGGAAAAGAAGACGCG+TGG | 0.657644 | 3.2:-79212338 | MS.gene06490:CDS |
| CGCGTGGTTTAAACAAACTG+AGG | 0.662648 | 3.2:-79212322 | MS.gene06490:CDS |
| CCAACGACCTCCAGGAGCAA+CGG | 0.665303 | 3.2:+79212020 | None:intergenic |
| ATTTAGGCAGGCTGACAGGG+TGG | 0.667154 | 3.2:-79202365 | MS.gene06490:CDS |
| AAACGGTGTAGCTTCTACGG+TGG | 0.670317 | 3.2:-79212418 | MS.gene06490:CDS |
| TCTCAGTAATGTCAAAACGT+GGG | 0.672398 | 3.2:+79202691 | None:intergenic |
| ACAGCAGTCATATCTCCGGT+AGG | 0.675857 | 3.2:+79205490 | None:intergenic |
| GCAGTTGATGATGTCAATGG+TGG | 0.686972 | 3.2:-79205906 | MS.gene06490:CDS |
| TGAAGGTTAAACCTGTGGCG+TGG | 0.690037 | 3.2:+79207646 | None:intergenic |
| AATGTAGCAGGAAACCGGAA+GGG | 0.691085 | 3.2:+79202849 | None:intergenic |
| GGCGCGAAGAGTGACATTGG+AGG | 0.700758 | 3.2:+79212602 | None:intergenic |
| TGAAGCTTCTAAGGTGAACG+AGG | 0.716612 | 3.2:-79212385 | MS.gene06490:CDS |
| CATCACCTGATATAAGACAG+AGG | 0.734188 | 3.2:+79208733 | None:intergenic |
| ACTTACAGGAGGAATGACCG+AGG | 0.769384 | 3.2:-79211480 | MS.gene06490:intron |
| AGCAGAACGAGTTAACGACG+TGG | 0.776174 | 3.2:-79212544 | MS.gene06490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 79201179 | 79212736 | 79201179 | ID=MS.gene06490 |
| chr3.2 | mRNA | 79201179 | 79212736 | 79201179 | ID=MS.gene06490.t1;Parent=MS.gene06490 |
| chr3.2 | exon | 79212308 | 79212736 | 79212308 | ID=MS.gene06490.t1.exon1;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79212308 | 79212736 | 79212308 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79211911 | 79212046 | 79211911 | ID=MS.gene06490.t1.exon2;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79211911 | 79212046 | 79211911 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79211328 | 79211494 | 79211328 | ID=MS.gene06490.t1.exon3;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79211328 | 79211494 | 79211328 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79210124 | 79210244 | 79210124 | ID=MS.gene06490.t1.exon4;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79210124 | 79210244 | 79210124 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79209098 | 79209198 | 79209098 | ID=MS.gene06490.t1.exon5;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79209098 | 79209198 | 79209098 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79208739 | 79208837 | 79208739 | ID=MS.gene06490.t1.exon6;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79208739 | 79208837 | 79208739 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79207658 | 79207768 | 79207658 | ID=MS.gene06490.t1.exon7;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79207658 | 79207768 | 79207658 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79207471 | 79207550 | 79207471 | ID=MS.gene06490.t1.exon8;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79207471 | 79207550 | 79207471 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79207283 | 79207352 | 79207283 | ID=MS.gene06490.t1.exon9;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79207283 | 79207352 | 79207283 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79205870 | 79205943 | 79205870 | ID=MS.gene06490.t1.exon10;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79205870 | 79205943 | 79205870 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79205673 | 79205742 | 79205673 | ID=MS.gene06490.t1.exon11;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79205673 | 79205742 | 79205673 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79205460 | 79205548 | 79205460 | ID=MS.gene06490.t1.exon12;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79205460 | 79205548 | 79205460 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79203381 | 79203505 | 79203381 | ID=MS.gene06490.t1.exon13;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79203381 | 79203505 | 79203381 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79202823 | 79202903 | 79202823 | ID=MS.gene06490.t1.exon14;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79202823 | 79202903 | 79202823 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79202681 | 79202741 | 79202681 | ID=MS.gene06490.t1.exon15;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79202681 | 79202741 | 79202681 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79202519 | 79202573 | 79202519 | ID=MS.gene06490.t1.exon16;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79202519 | 79202573 | 79202519 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79202336 | 79202434 | 79202336 | ID=MS.gene06490.t1.exon17;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79202336 | 79202434 | 79202336 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79202133 | 79202222 | 79202133 | ID=MS.gene06490.t1.exon18;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79202133 | 79202222 | 79202133 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79201437 | 79201496 | 79201437 | ID=MS.gene06490.t1.exon19;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79201437 | 79201496 | 79201437 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| chr3.2 | exon | 79201179 | 79201295 | 79201179 | ID=MS.gene06490.t1.exon20;Parent=MS.gene06490.t1 |
| chr3.2 | CDS | 79201179 | 79201295 | 79201179 | ID=cds.MS.gene06490.t1;Parent=MS.gene06490.t1 |
| Gene Sequence |
| Protein sequence |
