Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85601.t1 | XP_024637002.1 | 97.8 | 367 | 8 | 0 | 1 | 367 | 29 | 395 | 1.10E-199 | 705.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85601.t1 | Q949P3 | 75.0 | 364 | 90 | 1 | 4 | 367 | 3 | 365 | 5.6e-155 | 548.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85601.t1 | A0A072VMJ0 | 97.8 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 8.3e-200 | 705.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene85601 | 0.832131 | 1.13E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene85601 | 0.871386 | 7.11E-67 | -1.69E-46 |
| MS.gene049222 | MS.gene85601 | 0.880812 | 4.03E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene85601 | 0.912369 | 2.11E-83 | -1.69E-46 |
| MS.gene049285 | MS.gene85601 | 0.865794 | 4.56E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene85601 | 0.876894 | 9.71E-69 | -1.69E-46 |
| MS.gene049369 | MS.gene85601 | 0.827945 | 1.18E-54 | -1.69E-46 |
| MS.gene049396 | MS.gene85601 | 0.863685 | 2.09E-64 | -1.69E-46 |
| MS.gene049483 | MS.gene85601 | -0.806143 | 9.49E-50 | -1.69E-46 |
| MS.gene049600 | MS.gene85601 | 0.808887 | 2.48E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene85601 | 0.852002 | 6.14E-61 | -1.69E-46 |
| MS.gene049611 | MS.gene85601 | -0.814351 | 1.61E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene85601 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene85601 | 0.830698 | 2.54E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene85601 | 0.848478 | 5.98E-60 | -1.69E-46 |
| MS.gene049828 | MS.gene85601 | 0.8109 | 9.16E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene85601 | 0.868481 | 6.32E-66 | -1.69E-46 |
| MS.gene050163 | MS.gene85601 | 0.852668 | 3.97E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene85601 | 0.847805 | 9.17E-60 | -1.69E-46 |
| MS.gene050216 | MS.gene85601 | 0.903807 | 2.37E-79 | -1.69E-46 |
| MS.gene050323 | MS.gene85601 | 0.863141 | 3.08E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene85601 | 0.86336 | 2.63E-64 | -1.69E-46 |
| MS.gene050380 | MS.gene85601 | -0.865371 | 6.20E-65 | -1.69E-46 |
| MS.gene050381 | MS.gene85601 | -0.868199 | 7.80E-66 | -1.69E-46 |
| MS.gene050496 | MS.gene85601 | 0.817247 | 3.64E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene85601 | 0.865447 | 5.87E-65 | -1.69E-46 |
| MS.gene050502 | MS.gene85601 | 0.833689 | 4.62E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene85601 | 0.887622 | 1.21E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene85601 | 0.862693 | 4.23E-64 | -1.69E-46 |
| MS.gene050520 | MS.gene85601 | 0.828128 | 1.07E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene85601 | 0.807748 | 4.34E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene85601 | 0.81841 | 1.99E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene85601 | 0.83088 | 2.29E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene85601 | 0.871402 | 7.02E-67 | -1.69E-46 |
| MS.gene050647 | MS.gene85601 | -0.821357 | 4.21E-53 | -1.69E-46 |
| MS.gene050662 | MS.gene85601 | 0.865412 | 6.02E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene85601 | 0.863926 | 1.76E-64 | -1.69E-46 |
| MS.gene050686 | MS.gene85601 | 0.834571 | 2.78E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene85601 | 0.825548 | 4.41E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene85601 | 0.857055 | 2.12E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene85601 | 0.87685 | 1.01E-68 | -1.69E-46 |
| MS.gene05080 | MS.gene85601 | 0.855346 | 6.71E-62 | -1.69E-46 |
| MS.gene050868 | MS.gene85601 | 0.870248 | 1.68E-66 | -1.69E-46 |
| MS.gene050871 | MS.gene85601 | 0.872483 | 3.07E-67 | -1.69E-46 |
| MS.gene050883 | MS.gene85601 | -0.82189 | 3.17E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene85601 | 0.854735 | 1.01E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene85601 | 0.861515 | 9.72E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene85601 | 0.812527 | 4.05E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene85601 | -0.831896 | 1.29E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene85601 | -0.837091 | 6.38E-57 | -1.69E-46 |
| MS.gene051167 | MS.gene85601 | -0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene05118 | MS.gene85601 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene85601 | 0.803091 | 4.11E-49 | -1.69E-46 |
| MS.gene051268 | MS.gene85601 | 0.829947 | 3.87E-55 | -1.69E-46 |
| MS.gene051387 | MS.gene85601 | 0.812572 | 3.96E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene85601 | -0.82585 | 3.74E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene85601 | 0.88146 | 2.36E-70 | -1.69E-46 |
| MS.gene051551 | MS.gene85601 | 0.846261 | 2.43E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene85601 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene85601 | 0.806507 | 7.95E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene85601 | 0.839923 | 1.19E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene85601 | 0.834954 | 2.22E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene85601 | 0.834176 | 3.49E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene85601 | 0.854207 | 1.44E-61 | -1.69E-46 |
| MS.gene052066 | MS.gene85601 | 0.809695 | 1.67E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene85601 | 0.871177 | 8.34E-67 | -1.69E-46 |
| MS.gene052271 | MS.gene85601 | 0.817688 | 2.90E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene85601 | 0.817699 | 2.88E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene85601 | 0.848945 | 4.44E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene85601 | 0.851672 | 7.62E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene85601 | 0.813356 | 2.67E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene85601 | 0.817676 | 2.91E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene85601 | 0.832669 | 8.28E-56 | -1.69E-46 |
| MS.gene052632 | MS.gene85601 | 0.830101 | 3.55E-55 | -1.69E-46 |
| MS.gene052670 | MS.gene85601 | 0.819646 | 1.04E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene85601 | 0.824775 | 6.72E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene85601 | 0.810667 | 1.03E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene85601 | 0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene85601 | 0.862959 | 3.50E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene85601 | 0.856826 | 2.47E-62 | -1.69E-46 |
| MS.gene053018 | MS.gene85601 | 0.866365 | 3.01E-65 | -1.69E-46 |
| MS.gene053104 | MS.gene85601 | 0.823261 | 1.52E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene85601 | 0.84863 | 5.42E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene85601 | 0.82844 | 8.98E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene85601 | 0.874379 | 7.07E-68 | -1.69E-46 |
| MS.gene053286 | MS.gene85601 | 0.873596 | 1.30E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene85601 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene85601 | -0.864242 | 1.40E-64 | -1.69E-46 |
| MS.gene053436 | MS.gene85601 | 0.832376 | 9.79E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene85601 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene053505 | MS.gene85601 | 0.834355 | 3.14E-56 | -1.69E-46 |
| MS.gene053561 | MS.gene85601 | -0.827583 | 1.44E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene85601 | 0.893607 | 5.37E-75 | -1.69E-46 |
| MS.gene053626 | MS.gene85601 | 0.879308 | 1.39E-69 | -1.69E-46 |
| MS.gene053632 | MS.gene85601 | 0.839207 | 1.82E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene85601 | 0.843596 | 1.27E-58 | -1.69E-46 |
| MS.gene053813 | MS.gene85601 | 0.830289 | 3.19E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene85601 | 0.830556 | 2.75E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene85601 | 0.838562 | 2.67E-57 | -1.69E-46 |
| MS.gene054003 | MS.gene85601 | 0.879688 | 1.02E-69 | -1.69E-46 |
| MS.gene054408 | MS.gene85601 | 0.828724 | 7.67E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene85601 | 0.893087 | 8.71E-75 | -1.69E-46 |
| MS.gene054600 | MS.gene85601 | 0.832615 | 8.54E-56 | -1.69E-46 |
| MS.gene054616 | MS.gene85601 | -0.839118 | 1.92E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene85601 | 0.879352 | 1.34E-69 | -1.69E-46 |
| MS.gene054706 | MS.gene85601 | -0.826627 | 2.45E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene85601 | -0.809425 | 1.90E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene85601 | -0.826329 | 2.88E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene85601 | 0.801353 | 9.37E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene85601 | 0.868429 | 6.57E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene85601 | 0.837311 | 5.60E-57 | -1.69E-46 |
| MS.gene055124 | MS.gene85601 | -0.817437 | 3.30E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene85601 | -0.849357 | 3.41E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene85601 | -0.824151 | 9.43E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene85601 | 0.810998 | 8.72E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene85601 | 0.804938 | 1.70E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene85601 | 0.820745 | 5.83E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene85601 | 0.85794 | 1.16E-62 | -1.69E-46 |
| MS.gene055499 | MS.gene85601 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene85601 | 0.888077 | 8.13E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene85601 | 0.858837 | 6.26E-63 | -1.69E-46 |
| MS.gene055634 | MS.gene85601 | 0.811219 | 7.81E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene85601 | 0.837292 | 5.67E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene85601 | 0.84571 | 3.43E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene85601 | 0.825215 | 5.29E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene85601 | 0.869274 | 3.50E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene85601 | 0.806042 | 9.97E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene85601 | 0.837566 | 4.82E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene85601 | 0.814368 | 1.60E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene85601 | 0.803013 | 4.27E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene85601 | 0.823384 | 1.43E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene85601 | 0.849344 | 3.43E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene85601 | 0.854979 | 8.58E-62 | -1.69E-46 |
| MS.gene056040 | MS.gene85601 | 0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene85601 | 0.833155 | 6.27E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene85601 | 0.845356 | 4.27E-59 | -1.69E-46 |
| MS.gene056310 | MS.gene85601 | -0.803147 | 4.01E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene85601 | -0.815755 | 7.86E-52 | -1.69E-46 |
| MS.gene056313 | MS.gene85601 | -0.822132 | 2.79E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene85601 | 0.846195 | 2.53E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene85601 | 0.886199 | 4.21E-72 | -1.69E-46 |
| MS.gene056446 | MS.gene85601 | 0.813876 | 2.05E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene85601 | 0.857786 | 1.29E-62 | -1.69E-46 |
| MS.gene056487 | MS.gene85601 | 0.830186 | 3.38E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene85601 | 0.877451 | 6.22E-69 | -1.69E-46 |
| MS.gene056510 | MS.gene85601 | 0.868361 | 6.91E-66 | -1.69E-46 |
| MS.gene056511 | MS.gene85601 | 0.80745 | 5.02E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene85601 | 0.846861 | 1.66E-59 | -1.69E-46 |
| MS.gene056657 | MS.gene85601 | 0.879143 | 1.58E-69 | -1.69E-46 |
| MS.gene056692 | MS.gene85601 | 0.813313 | 2.73E-51 | -1.69E-46 |
| MS.gene056878 | MS.gene85601 | 0.811361 | 7.28E-51 | -1.69E-46 |
| MS.gene056942 | MS.gene85601 | 0.836273 | 1.03E-56 | -1.69E-46 |
| MS.gene057076 | MS.gene85601 | 0.836335 | 9.94E-57 | -1.69E-46 |
| MS.gene057086 | MS.gene85601 | 0.866014 | 3.89E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene85601 | 0.807238 | 5.57E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene85601 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene85601 | 0.819116 | 1.37E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene85601 | 0.83079 | 2.41E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene85601 | 0.851583 | 8.08E-61 | -1.69E-46 |
| MS.gene057473 | MS.gene85601 | -0.810084 | 1.37E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene85601 | 0.830561 | 2.74E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene85601 | 0.810868 | 9.31E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene85601 | 0.811284 | 7.56E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene85601 | 0.849127 | 3.95E-60 | -1.69E-46 |
| MS.gene057926 | MS.gene85601 | 0.860041 | 2.72E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene85601 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene058041 | MS.gene85601 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene058108 | MS.gene85601 | -0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene058109 | MS.gene85601 | -0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene85601 | 0.845299 | 4.43E-59 | -1.69E-46 |
| MS.gene058157 | MS.gene85601 | 0.83034 | 3.10E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene85601 | -0.849842 | 2.49E-60 | -1.69E-46 |
| MS.gene058173 | MS.gene85601 | -0.844209 | 8.71E-59 | -1.69E-46 |
| MS.gene058175 | MS.gene85601 | -0.853027 | 3.13E-61 | -1.69E-46 |
| MS.gene058183 | MS.gene85601 | 0.814959 | 1.18E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene85601 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene85601 | 0.806374 | 8.48E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene85601 | 0.856581 | 2.92E-62 | -1.69E-46 |
| MS.gene058419 | MS.gene85601 | 0.861588 | 9.23E-64 | -1.69E-46 |
| MS.gene058459 | MS.gene85601 | 0.844956 | 5.48E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene85601 | 0.825012 | 5.91E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene85601 | 0.870316 | 1.60E-66 | -1.69E-46 |
| MS.gene05883 | MS.gene85601 | 0.806051 | 9.92E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene85601 | -0.859804 | 3.21E-63 | -1.69E-46 |
| MS.gene058978 | MS.gene85601 | -0.807515 | 4.87E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene85601 | 0.864547 | 1.12E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene85601 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene85601 | 0.813195 | 2.89E-51 | -1.69E-46 |
| MS.gene059034 | MS.gene85601 | 0.80199 | 6.94E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene85601 | -0.813754 | 2.18E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene85601 | -0.81226 | 4.64E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene85601 | 0.879594 | 1.10E-69 | -1.69E-46 |
| MS.gene059305 | MS.gene85601 | 0.847627 | 1.03E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene85601 | 0.819657 | 1.03E-52 | -1.69E-46 |
| MS.gene059367 | MS.gene85601 | 0.906571 | 1.29E-80 | -1.69E-46 |
| MS.gene059368 | MS.gene85601 | 0.872174 | 3.89E-67 | -1.69E-46 |
| MS.gene059536 | MS.gene85601 | 0.831969 | 1.24E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene85601 | 0.822172 | 2.73E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene85601 | 0.840888 | 6.63E-58 | -1.69E-46 |
| MS.gene059680 | MS.gene85601 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene85601 | 0.849745 | 2.65E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene85601 | 0.876489 | 1.34E-68 | -1.69E-46 |
| MS.gene059801 | MS.gene85601 | 0.84041 | 8.84E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene85601 | 0.896681 | 2.92E-76 | -1.69E-46 |
| MS.gene059902 | MS.gene85601 | 0.832022 | 1.20E-55 | -1.69E-46 |
| MS.gene059943 | MS.gene85601 | -0.81921 | 1.31E-52 | -1.69E-46 |
| MS.gene059944 | MS.gene85601 | -0.800004 | 1.77E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene85601 | 0.819564 | 1.09E-52 | -1.69E-46 |
| MS.gene060295 | MS.gene85601 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene060356 | MS.gene85601 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene85601 | 0.910791 | 1.26E-82 | -1.69E-46 |
| MS.gene060595 | MS.gene85601 | -0.826134 | 3.20E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene85601 | 0.855773 | 5.04E-62 | -1.69E-46 |
| MS.gene060762 | MS.gene85601 | 0.853186 | 2.82E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene85601 | 0.876096 | 1.83E-68 | -1.69E-46 |
| MS.gene06077 | MS.gene85601 | 0.856839 | 2.45E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene85601 | 0.826003 | 3.44E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene85601 | 0.845538 | 3.82E-59 | -1.69E-46 |
| MS.gene060835 | MS.gene85601 | 0.827734 | 1.33E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene85601 | 0.847075 | 1.45E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene85601 | 0.823543 | 1.31E-53 | -1.69E-46 |
| MS.gene06097 | MS.gene85601 | 0.827729 | 1.33E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene85601 | 0.860683 | 1.74E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene85601 | 0.829765 | 4.29E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene85601 | 0.909549 | 5.04E-82 | -1.69E-46 |
| MS.gene061150 | MS.gene85601 | 0.813821 | 2.11E-51 | -1.69E-46 |
| MS.gene061171 | MS.gene85601 | 0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene85601 | 0.848761 | 4.99E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85601.t1 | MTR_1g076720 | 97.820 | 367 | 8 | 0 | 1 | 367 | 1 | 367 | 0.0 | 724 |
| MS.gene85601.t1 | MTR_1g076730 | 89.402 | 368 | 38 | 1 | 1 | 367 | 154 | 521 | 0.0 | 646 |
| MS.gene85601.t1 | MTR_6g060550 | 79.396 | 364 | 74 | 1 | 4 | 367 | 3 | 365 | 0.0 | 598 |
| MS.gene85601.t1 | MTR_6g060550 | 78.683 | 319 | 67 | 1 | 4 | 322 | 44 | 361 | 0.0 | 514 |
| MS.gene85601.t1 | MTR_6g060550 | 78.683 | 319 | 67 | 1 | 4 | 322 | 3 | 320 | 0.0 | 511 |
| MS.gene85601.t1 | MTR_3g077740 | 36.269 | 386 | 201 | 10 | 11 | 365 | 519 | 890 | 7.89e-64 | 218 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85601.t1 | AT4G35360 | 75.549 | 364 | 88 | 1 | 4 | 367 | 3 | 365 | 0.0 | 566 |
| MS.gene85601.t1 | AT4G35360 | 75.549 | 364 | 88 | 1 | 4 | 367 | 3 | 365 | 0.0 | 566 |
| MS.gene85601.t1 | AT2G17340 | 75.000 | 364 | 90 | 1 | 4 | 367 | 3 | 365 | 0.0 | 561 |
| MS.gene85601.t1 | AT2G17320 | 71.944 | 360 | 100 | 1 | 8 | 367 | 1 | 359 | 0.0 | 531 |
| MS.gene85601.t1 | AT2G17320 | 72.107 | 337 | 93 | 1 | 8 | 344 | 1 | 336 | 1.13e-176 | 494 |
| MS.gene85601.t1 | AT4G35360 | 80.000 | 260 | 52 | 0 | 108 | 367 | 9 | 268 | 1.31e-152 | 431 |
| MS.gene85601.t1 | AT4G32180 | 34.959 | 369 | 198 | 9 | 36 | 364 | 530 | 896 | 5.48e-59 | 205 |
| MS.gene85601.t1 | AT4G32180 | 34.263 | 251 | 146 | 6 | 36 | 269 | 530 | 778 | 4.51e-39 | 148 |
| MS.gene85601.t1 | AT4G32180 | 34.263 | 251 | 146 | 6 | 36 | 269 | 530 | 778 | 4.51e-39 | 148 |
Find 69 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACGAACAACATTCTCAAAT+AGG | 0.282309 | 1.3:-55203267 | None:intergenic |
| GCTCCTTCGGCGTGGGAGTC+AGG | 0.315802 | 1.3:+55204004 | MS.gene85601:CDS |
| GCTTTGAGTGCAGGTTGTTT+TGG | 0.323869 | 1.3:+55204455 | MS.gene85601:intron |
| CGACTTGAGAATTTAGTTAG+AGG | 0.325458 | 1.3:+55203319 | MS.gene85601:CDS |
| AATGGTGCATGCTGAGTATT+TGG | 0.337934 | 1.3:-55202227 | None:intergenic |
| CATTTGCAAGGGAGCTCCTT+CGG | 0.363751 | 1.3:+55203991 | MS.gene85601:CDS |
| TGAGGAAGTTCTTAAAGAAC+TGG | 0.366642 | 1.3:+55202891 | MS.gene85601:CDS |
| GAGTAAGAAGTCGTGGAAAA+AGG | 0.372519 | 1.3:+55203811 | MS.gene85601:CDS |
| TCAGCTTTATTTGCAGCATC+AGG | 0.385927 | 1.3:-55202467 | None:intergenic |
| TCAGTATCATCCATCAATAA+AGG | 0.402411 | 1.3:-55202199 | None:intergenic |
| ACGAACAACATTCTCAAATA+GGG | 0.405415 | 1.3:-55203266 | None:intergenic |
| GCAGGGAACGTATTTGATCT+TGG | 0.416285 | 1.3:+55203349 | MS.gene85601:CDS |
| AGAGGATCGCCATGACTTGC+AGG | 0.416925 | 1.3:-55202714 | None:intergenic |
| TCACTCCCACCGAGTTATCT+TGG | 0.422428 | 1.3:+55202284 | MS.gene85601:CDS |
| GGATGAAGAAGGACGTCTCT+TGG | 0.448800 | 1.3:+55204622 | MS.gene85601:CDS |
| CGAAGGAGCTCCCTTGCAAA+TGG | 0.452323 | 1.3:-55203990 | None:intergenic |
| GGTGAGATTTCCTTTATTGA+TGG | 0.457589 | 1.3:+55202189 | MS.gene85601:CDS |
| TAAGTCACATCATTGATAGA+AGG | 0.480649 | 1.3:-55204492 | None:intergenic |
| GATGAAGAAGGACGTCTCTT+GGG | 0.482977 | 1.3:+55204623 | MS.gene85601:CDS |
| CAAGATCTACATCACTGGTA+AGG | 0.485155 | 1.3:-55204848 | None:intergenic |
| ACTCAGCATGCACCATTCCT+TGG | 0.486421 | 1.3:+55202233 | MS.gene85601:CDS |
| CAAGGGAGCTCCTTCGGCGT+GGG | 0.491227 | 1.3:+55203997 | MS.gene85601:CDS |
| ATCATATTTGTTGATAACTC+GGG | 0.491873 | 1.3:+55203942 | MS.gene85601:CDS |
| AGGTAAATCATTTCCAGAGT+TGG | 0.492461 | 1.3:-55204672 | None:intergenic |
| AATGATGCTATTGAAGATGA+AGG | 0.504453 | 1.3:+55203292 | MS.gene85601:CDS |
| TATCATATTTGTTGATAACT+CGG | 0.512521 | 1.3:+55203941 | MS.gene85601:CDS |
| TCAAGAAATTCTGCAACCTC+AGG | 0.517783 | 1.3:-55205557 | None:intergenic |
| CAGCATGCACCATTCCTTGG+AGG | 0.526434 | 1.3:+55202236 | MS.gene85601:CDS |
| TTGCAGAATTTCTTGAGTCA+CGG | 0.536535 | 1.3:+55205564 | MS.gene85601:CDS |
| GTGAGATCATACTTGTAGGA+GGG | 0.547151 | 1.3:-55202331 | None:intergenic |
| GCAGAAGCTTTCTCTAGGGA+TGG | 0.550760 | 1.3:+55203707 | MS.gene85601:CDS |
| GCTAATTGAAATTATATCAA+AGG | 0.552577 | 1.3:+55204521 | MS.gene85601:CDS |
| AGCTTGCAGAAGCTTTCTCT+AGG | 0.552796 | 1.3:+55203702 | MS.gene85601:intron |
| ATTTGATCTTGGTTCTCCCC+AGG | 0.554481 | 1.3:+55203360 | MS.gene85601:CDS |
| TGAGATCATACTTGTAGGAG+GGG | 0.554989 | 1.3:-55202330 | None:intergenic |
| GCAAGGGAGCTCCTTCGGCG+TGG | 0.555601 | 1.3:+55203996 | MS.gene85601:CDS |
| AAAATCTTCTCCCTCGACCA+TGG | 0.556892 | 1.3:+55203753 | MS.gene85601:CDS |
| TCATCGATAATCCATGGTCG+AGG | 0.558003 | 1.3:-55203764 | None:intergenic |
| GGCAAGTAGTAGATCACAGT+TGG | 0.563650 | 1.3:+55202168 | MS.gene85601:CDS |
| AAGATCTACATCACTGGTAA+GGG | 0.573418 | 1.3:-55204847 | None:intergenic |
| TGTGAGATCATACTTGTAGG+AGG | 0.573650 | 1.3:-55202332 | None:intergenic |
| AATGACAAGATCTACATCAC+TGG | 0.576486 | 1.3:-55204853 | None:intergenic |
| AAGAAAGATCCTGCAAGTCA+TGG | 0.579855 | 1.3:+55202705 | MS.gene85601:CDS |
| AAACCTGACTCCCACGCCGA+AGG | 0.580767 | 1.3:-55204007 | None:intergenic |
| AGAAGGGAACCTCCAAGGAA+TGG | 0.582699 | 1.3:-55202245 | None:intergenic |
| TCAGATGGAGTAAGAAGTCG+TGG | 0.585426 | 1.3:+55203804 | MS.gene85601:CDS |
| AGGAGGGGATACCACTGTCT+AGG | 0.589365 | 1.3:-55202315 | None:intergenic |
| GCAGGTTATTGATCTTACAA+AGG | 0.592904 | 1.3:+55204806 | MS.gene85601:intron |
| GCTTGCAGAAGCTTTCTCTA+GGG | 0.594621 | 1.3:+55203703 | MS.gene85601:intron |
| GAGGAAGTTCTTAAAGAACT+GGG | 0.598212 | 1.3:+55202892 | MS.gene85601:CDS |
| TCAAGGTCATCGATAATCCA+TGG | 0.602984 | 1.3:-55203770 | None:intergenic |
| TGCCAGTTAAAGGATGAAGA+AGG | 0.608692 | 1.3:+55204611 | MS.gene85601:intron |
| TCATCAGAAGGGAACCTCCA+AGG | 0.615232 | 1.3:-55202250 | None:intergenic |
| GAACATACAAGGATATCAAG+AGG | 0.620851 | 1.3:-55202732 | None:intergenic |
| CGATTCTATGAAGATTGCAA+TGG | 0.624387 | 1.3:+55205429 | MS.gene85601:CDS |
| ACTACACGTGGATCATCAGA+AGG | 0.625437 | 1.3:-55202262 | None:intergenic |
| CATCTCTTATGACAGGGGCG+TGG | 0.626718 | 1.3:+55205373 | MS.gene85601:intron |
| TTTATCCAAGATAACTCGGT+GGG | 0.627208 | 1.3:-55202289 | None:intergenic |
| CATCGATAATCCATGGTCGA+GGG | 0.636580 | 1.3:-55203763 | None:intergenic |
| GAGATTTATCCAAGATAACT+CGG | 0.639617 | 1.3:-55202293 | None:intergenic |
| AGATATCTTCAAGAAAGTCA+AGG | 0.640034 | 1.3:+55202921 | MS.gene85601:CDS |
| GCTTCTATGTAGACTTCGTG+AGG | 0.640274 | 1.3:+55202873 | MS.gene85601:intron |
| CTTACAGGTGAAACATCCTG+AGG | 0.644122 | 1.3:+55205541 | MS.gene85601:intron |
| ACAGGCTGAAGAGAATGCAA+AGG | 0.653718 | 1.3:+55203237 | MS.gene85601:intron |
| TGGATAAATCTCCTAGACAG+TGG | 0.682304 | 1.3:+55202304 | MS.gene85601:CDS |
| AGGAAGTTCTTAAAGAACTG+GGG | 0.687598 | 1.3:+55202893 | MS.gene85601:CDS |
| TCGGTGGGAGTGACTACACG+TGG | 0.696965 | 1.3:-55202274 | None:intergenic |
| ATTTATCCAAGATAACTCGG+TGG | 0.722264 | 1.3:-55202290 | None:intergenic |
| CTACACGTGGATCATCAGAA+GGG | 0.724492 | 1.3:-55202261 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGAATTATTATAAATCT+TGG | - | chr1.3:55203203-55203222 | None:intergenic | 10.0% |
| !!! | AATTAATTTCAACAAATTTT+TGG | + | chr1.3:55204551-55204570 | MS.gene85601:intron | 10.0% |
| !!! | ATTAATTTTTAGCTTTTATT+TGG | + | chr1.3:55202411-55202430 | MS.gene85601:intron | 10.0% |
| !! | ATTAAGTGTATTATAGTAAA+AGG | + | chr1.3:55205123-55205142 | MS.gene85601:intron | 15.0% |
| !!! | AATAAATTCATTTTGAGAAA+AGG | - | chr1.3:55203570-55203589 | None:intergenic | 15.0% |
| !!! | CATAATCAATTTATTTTTCA+TGG | + | chr1.3:55203913-55203932 | MS.gene85601:intron | 15.0% |
| !!! | TATATCAAACATTTTAGTAT+TGG | - | chr1.3:55202793-55202812 | None:intergenic | 15.0% |
| !! | ATAAATAAATGTCTTCTAGT+AGG | - | chr1.3:55203595-55203614 | None:intergenic | 20.0% |
| !! | GCTAATTGAAATTATATCAA+AGG | + | chr1.3:55204521-55204540 | MS.gene85601:CDS | 20.0% |
| !!! | AACATTTTGTTTGCTATATT+AGG | + | chr1.3:55204713-55204732 | MS.gene85601:intron | 20.0% |
| !!! | AAGAACATATAACTTTGTTT+TGG | - | chr1.3:55204095-55204114 | None:intergenic | 20.0% |
| !!! | ATTAAAAGTACGAAGTTTAT+TGG | + | chr1.3:55205157-55205176 | MS.gene85601:intron | 20.0% |
| !!! | ATTGTATGCTTTTTCTATTT+GGG | + | chr1.3:55204908-55204927 | MS.gene85601:intron | 20.0% |
| !!! | ATTTCAAAAAGCTTTAAAAG+TGG | - | chr1.3:55204427-55204446 | None:intergenic | 20.0% |
| !!! | TAAATCATATAGTTCCATTT+TGG | + | chr1.3:55203177-55203196 | MS.gene85601:intron | 20.0% |
| !!! | TATCATATTTGTTGATAACT+CGG | + | chr1.3:55203941-55203960 | MS.gene85601:CDS | 20.0% |
| !!! | TTATAAATCAATATTGACTG+TGG | + | chr1.3:55205035-55205054 | MS.gene85601:intron | 20.0% |
| !!! | TTTTCAATGTCATTAAGATA+GGG | + | chr1.3:55203136-55203155 | MS.gene85601:intron | 20.0% |
| ! | AAAAAGCCACATAATTTAAG+TGG | - | chr1.3:55204163-55204182 | None:intergenic | 25.0% |
| ! | AACAACAATTTGAATTACCT+AGG | - | chr1.3:55202617-55202636 | None:intergenic | 25.0% |
| ! | AAGAATTGTATGTGTATATC+TGG | + | chr1.3:55203009-55203028 | MS.gene85601:intron | 25.0% |
| ! | AAGATTAAGAAAACAATCTG+CGG | + | chr1.3:55202945-55202964 | MS.gene85601:intron | 25.0% |
| ! | ACAACGAATAAAGAGAATAA+GGG | - | chr1.3:55202841-55202860 | None:intergenic | 25.0% |
| ! | ATATATAATCCTCCAAACAT+TGG | - | chr1.3:55203634-55203653 | None:intergenic | 25.0% |
| ! | ATATATGATTTGAATGCAAC+AGG | + | chr1.3:55203219-55203238 | MS.gene85601:intron | 25.0% |
| ! | ATCAACTATTCATATAGTTC+CGG | - | chr1.3:55203512-55203531 | None:intergenic | 25.0% |
| ! | ATTATAAATCTTGGCCAAAA+TGG | - | chr1.3:55203194-55203213 | None:intergenic | 25.0% |
| ! | CAATAATTCTTGTCAGAAAT+TGG | + | chr1.3:55205327-55205346 | MS.gene85601:intron | 25.0% |
| ! | CATACAATTCTTCCAAAATT+TGG | - | chr1.3:55203001-55203020 | None:intergenic | 25.0% |
| ! | GAGATGGTTATAAAATTAAC+CGG | + | chr1.3:55203490-55203509 | MS.gene85601:intron | 25.0% |
| ! | GATTTATAAAAGTGACAGAA+AGG | - | chr1.3:55205024-55205043 | None:intergenic | 25.0% |
| ! | TAACTAAATACACCTATTGA+AGG | - | chr1.3:55205305-55205324 | None:intergenic | 25.0% |
| ! | TTTCAATGTCATTAAGATAG+GGG | + | chr1.3:55203137-55203156 | MS.gene85601:intron | 25.0% |
| ! | TTTGTGCATTCATTTCAAAA+AGG | + | chr1.3:55202658-55202677 | MS.gene85601:intron | 25.0% |
| !! | AATACTATTCAGCCAAATTT+TGG | + | chr1.3:55202986-55203005 | MS.gene85601:intron | 25.0% |
| !! | AATGCATTCTTTTCATGATT+TGG | + | chr1.3:55203084-55203103 | MS.gene85601:intron | 25.0% |
| !! | ATCTGATTTTCAAAATGTCA+AGG | - | chr1.3:55203790-55203809 | None:intergenic | 25.0% |
| !! | CTTTTCAATGTCATTAAGAT+AGG | + | chr1.3:55203135-55203154 | MS.gene85601:intron | 25.0% |
| !! | TATCTTTCAAACGTATTTTC+TGG | + | chr1.3:55204047-55204066 | MS.gene85601:intron | 25.0% |
| !! | TATGTAATTTTGTTCACTTC+TGG | + | chr1.3:55203398-55203417 | MS.gene85601:intron | 25.0% |
| !! | TCTGGTTTCTTTATAGTTTA+TGG | + | chr1.3:55204740-55204759 | MS.gene85601:intron | 25.0% |
| !! | TTTCTGAAAAACAATCTTAC+AGG | - | chr1.3:55204695-55204714 | None:intergenic | 25.0% |
| !! | TTTTATAACCATCTCTTTCT+CGG | - | chr1.3:55203485-55203504 | None:intergenic | 25.0% |
| !!! | ATCAATTTATTTTTCATGGC+AGG | + | chr1.3:55203917-55203936 | MS.gene85601:intron | 25.0% |
| !!! | ATCATATTTGTTGATAACTC+GGG | + | chr1.3:55203942-55203961 | MS.gene85601:CDS | 25.0% |
| !!! | CATTGTATGCTTTTTCTATT+TGG | + | chr1.3:55204907-55204926 | MS.gene85601:intron | 25.0% |
| !!! | TAGATCTTGTCATTTTAGAA+GGG | + | chr1.3:55204862-55204881 | MS.gene85601:CDS | 25.0% |
| !!! | TCTGTCATTATTTTTCTTAC+AGG | + | chr1.3:55205526-55205545 | MS.gene85601:intron | 25.0% |
| !!! | TTCCTTTCTAGTTTCTTTTA+AGG | - | chr1.3:55205205-55205224 | None:intergenic | 25.0% |
| !!! | TTGACATTTTGAAAATCAGA+TGG | + | chr1.3:55203789-55203808 | MS.gene85601:CDS | 25.0% |
| !!! | TTTTAGCTTTTATTTGGTAC+AGG | + | chr1.3:55202417-55202436 | MS.gene85601:intron | 25.0% |
| AACATCTTGCAGAAAGAATA+TGG | + | chr1.3:55203053-55203072 | MS.gene85601:intron | 30.0% | |
| AATGATGCTATTGAAGATGA+AGG | + | chr1.3:55203292-55203311 | MS.gene85601:CDS | 30.0% | |
| ACACCTATTGAAGGAAAAAT+TGG | - | chr1.3:55205296-55205315 | None:intergenic | 30.0% | |
| ACAGAGTTAGGAAAAAACTT+TGG | - | chr1.3:55204582-55204601 | None:intergenic | 30.0% | |
| ACATCTTGCAGAAAGAATAT+GGG | + | chr1.3:55203054-55203073 | MS.gene85601:intron | 30.0% | |
| ACGAACAACATTCTCAAATA+GGG | - | chr1.3:55203269-55203288 | None:intergenic | 30.0% | |
| AGATATCTTCAAGAAAGTCA+AGG | + | chr1.3:55202921-55202940 | MS.gene85601:CDS | 30.0% | |
| AGCCTTAAAAGAAACTAGAA+AGG | + | chr1.3:55205200-55205219 | MS.gene85601:intron | 30.0% | |
| ATAGAGAAAATCAAACTACC+TGG | - | chr1.3:55203381-55203400 | None:intergenic | 30.0% | |
| ATCCTTGTATGTTCTTTATC+TGG | + | chr1.3:55202741-55202760 | MS.gene85601:intron | 30.0% | |
| ATGTGTATATCTGGTTATTG+AGG | + | chr1.3:55203018-55203037 | MS.gene85601:intron | 30.0% | |
| ATTGATTATGACACTACTCT+TGG | - | chr1.3:55203903-55203922 | None:intergenic | 30.0% | |
| CACAACGAATAAAGAGAATA+AGG | - | chr1.3:55202842-55202861 | None:intergenic | 30.0% | |
| CCATATACTGACAATTTGTA+AGG | + | chr1.3:55203541-55203560 | MS.gene85601:intron | 30.0% | |
| CCTTACAAATTGTCAGTATA+TGG | - | chr1.3:55203544-55203563 | None:intergenic | 30.0% | |
| GAGATTTATCCAAGATAACT+CGG | - | chr1.3:55202296-55202315 | None:intergenic | 30.0% | |
| GTTGAACCACTTAAATTATG+TGG | + | chr1.3:55204154-55204173 | MS.gene85601:intron | 30.0% | |
| TAAGTCACATCATTGATAGA+AGG | - | chr1.3:55204495-55204514 | None:intergenic | 30.0% | |
| TACAATCATATGCCAATGTT+TGG | + | chr1.3:55203619-55203638 | MS.gene85601:intron | 30.0% | |
| TAGAGAAAATCAAACTACCT+GGG | - | chr1.3:55203380-55203399 | None:intergenic | 30.0% | |
| TATAAAGCGAAATGAATTCC+AGG | - | chr1.3:55204311-55204330 | None:intergenic | 30.0% | |
| TATGATGATTACTTTCTTGC+AGG | + | chr1.3:55204788-55204807 | MS.gene85601:intron | 30.0% | |
| TCAGTATCATCCATCAATAA+AGG | - | chr1.3:55202202-55202221 | None:intergenic | 30.0% | |
| TCGCTTTATAAAGAACTTAG+AGG | + | chr1.3:55204321-55204340 | MS.gene85601:intron | 30.0% | |
| TTTGTAGAAAGGGGAAAAAA+GGG | - | chr1.3:55204964-55204983 | None:intergenic | 30.0% | |
| ! | AAGCTGAAATTTTTGCTCAA+AGG | + | chr1.3:55202483-55202502 | MS.gene85601:CDS | 30.0% |
| ! | GAAATTTTTGCTCAAAGGTT+AGG | + | chr1.3:55202488-55202507 | MS.gene85601:intron | 30.0% |
| ! | TAGTTAGAGGAATTTTTGCA+GGG | + | chr1.3:55203332-55203351 | MS.gene85601:CDS | 30.0% |
| ! | TCTCCAATTTTTCCTTCAAT+AGG | + | chr1.3:55205290-55205309 | MS.gene85601:intron | 30.0% |
| ! | TGTTGAAGTGTCTATATTTG+TGG | + | chr1.3:55204116-55204135 | MS.gene85601:intron | 30.0% |
| ! | TTAGTTAGAGGAATTTTTGC+AGG | + | chr1.3:55203331-55203350 | MS.gene85601:CDS | 30.0% |
| ! | TTTGCTATATTAGGAAGTTC+TGG | + | chr1.3:55204722-55204741 | MS.gene85601:intron | 30.0% |
| ! | TTTTGTGAGATCATACTTGT+AGG | - | chr1.3:55202338-55202357 | None:intergenic | 30.0% |
| !! | AATCTTTTAATTGCCAACTC+TGG | + | chr1.3:55204659-55204678 | MS.gene85601:CDS | 30.0% |
| !! | CAGATTTTTAAGCAAGTGTT+AGG | - | chr1.3:55203442-55203461 | None:intergenic | 30.0% |
| !! | TTCAAACGTATTTTCTGGTA+TGG | + | chr1.3:55204052-55204071 | MS.gene85601:intron | 30.0% |
| !!! | AATTTTGTGTTTTAGCAGTG+GGG | + | chr1.3:55204216-55204235 | MS.gene85601:intron | 30.0% |
| !!! | CAATTTTGTGTTTTAGCAGT+GGG | + | chr1.3:55204215-55204234 | MS.gene85601:intron | 30.0% |
| !!! | GTAGATCTTGTCATTTTAGA+AGG | + | chr1.3:55204861-55204880 | MS.gene85601:CDS | 30.0% |
| !!! | TATAACTTTGTTTTGGCAGT+TGG | - | chr1.3:55204088-55204107 | None:intergenic | 30.0% |
| AAGAAACTAGAAAGGAACAG+AGG | + | chr1.3:55205208-55205227 | MS.gene85601:intron | 35.0% | |
| AAGATCTACATCACTGGTAA+GGG | - | chr1.3:55204850-55204869 | None:intergenic | 35.0% | |
| AATAAGGGATAACACAGAAG+GGG | - | chr1.3:55202826-55202845 | None:intergenic | 35.0% | |
| AATCATATGCCAATGTTTGG+AGG | + | chr1.3:55203622-55203641 | MS.gene85601:intron | 35.0% | |
| AATGACAAGATCTACATCAC+TGG | - | chr1.3:55204856-55204875 | None:intergenic | 35.0% | |
| AATGTCATTAAGATAGGGGA+TGG | + | chr1.3:55203141-55203160 | MS.gene85601:intron | 35.0% | |
| ACAATAGATCAATGTGTTGC+AGG | + | chr1.3:55204280-55204299 | MS.gene85601:intron | 35.0% | |
| ACCTCTCAAAGTAAACGAAA+AGG | - | chr1.3:55202538-55202557 | None:intergenic | 35.0% | |
| AGAAACTAGAAAGGAACAGA+GGG | + | chr1.3:55205209-55205228 | MS.gene85601:intron | 35.0% | |
| AGAATAAGGGATAACACAGA+AGG | - | chr1.3:55202828-55202847 | None:intergenic | 35.0% | |
| AGAGAAAATCAAACTACCTG+GGG | - | chr1.3:55203379-55203398 | None:intergenic | 35.0% | |
| AGGAAGTTCTTAAAGAACTG+GGG | + | chr1.3:55202893-55202912 | MS.gene85601:CDS | 35.0% | |
| AGGTAAATCATTTCCAGAGT+TGG | - | chr1.3:55204675-55204694 | None:intergenic | 35.0% | |
| AGTCAACTATTTGACAGCAT+CGG | - | chr1.3:55204766-55204785 | None:intergenic | 35.0% | |
| ATTTATCCAAGATAACTCGG+TGG | - | chr1.3:55202293-55202312 | None:intergenic | 35.0% | |
| CATCTTGCAGAAAGAATATG+GGG | + | chr1.3:55203055-55203074 | MS.gene85601:intron | 35.0% | |
| CCTCTCAAAGTAAACGAAAA+GGG | - | chr1.3:55202537-55202556 | None:intergenic | 35.0% | |
| CGACTTGAGAATTTAGTTAG+AGG | + | chr1.3:55203319-55203338 | MS.gene85601:CDS | 35.0% | |
| CGATTCTATGAAGATTGCAA+TGG | + | chr1.3:55205429-55205448 | MS.gene85601:CDS | 35.0% | |
| CTTTGTAGAAAGGGGAAAAA+AGG | - | chr1.3:55204965-55204984 | None:intergenic | 35.0% | |
| GAACATACAAGGATATCAAG+AGG | - | chr1.3:55202735-55202754 | None:intergenic | 35.0% | |
| GAATAAGGGATAACACAGAA+GGG | - | chr1.3:55202827-55202846 | None:intergenic | 35.0% | |
| GACGAACAACATTCTCAAAT+AGG | - | chr1.3:55203270-55203289 | None:intergenic | 35.0% | |
| GAGGAAGTTCTTAAAGAACT+GGG | + | chr1.3:55202892-55202911 | MS.gene85601:CDS | 35.0% | |
| GCAGGTTATTGATCTTACAA+AGG | + | chr1.3:55204806-55204825 | MS.gene85601:intron | 35.0% | |
| GGTGAGATTTCCTTTATTGA+TGG | + | chr1.3:55202189-55202208 | MS.gene85601:CDS | 35.0% | |
| GTCCAGATAAAGAACATACA+AGG | - | chr1.3:55202746-55202765 | None:intergenic | 35.0% | |
| TGAGGAAGTTCTTAAAGAAC+TGG | + | chr1.3:55202891-55202910 | MS.gene85601:CDS | 35.0% | |
| TGCAAGCTTCAAGAAATTGA+GGG | - | chr1.3:55203690-55203709 | None:intergenic | 35.0% | |
| TTATGTCTTCTGACGAATCT+TGG | + | chr1.3:55203877-55203896 | MS.gene85601:intron | 35.0% | |
| TTGCAGAATTTCTTGAGTCA+CGG | + | chr1.3:55205564-55205583 | MS.gene85601:CDS | 35.0% | |
| TTTATCCAAGATAACTCGGT+GGG | - | chr1.3:55202292-55202311 | None:intergenic | 35.0% | |
| ! | ACCTGTTTCTCATAAACATC+AGG | + | chr1.3:55202575-55202594 | MS.gene85601:intron | 35.0% |
| ! | ACTTCTGAGAGAGAAATATG+TGG | + | chr1.3:55205085-55205104 | MS.gene85601:intron | 35.0% |
| ! | ATTTTTGCTCAAAGGTTAGG+TGG | + | chr1.3:55202491-55202510 | MS.gene85601:intron | 35.0% |
| ! | TCATGTTGATTGCCAGTTAA+AGG | + | chr1.3:55204601-55204620 | MS.gene85601:intron | 35.0% |
| ! | TCGGGTGCAGATATAATTTT+AGG | + | chr1.3:55203960-55203979 | MS.gene85601:CDS | 35.0% |
| !! | AGGTATTTTGCCATTTGCAA+GGG | + | chr1.3:55203980-55203999 | MS.gene85601:CDS | 35.0% |
| !! | TAGGTATTTTGCCATTTGCA+AGG | + | chr1.3:55203979-55203998 | MS.gene85601:CDS | 35.0% |
| !!! | ATTTTGTGTTTTAGCAGTGG+GGG | + | chr1.3:55204217-55204236 | MS.gene85601:intron | 35.0% |
| !!! | GCAATTTTGTGTTTTAGCAG+TGG | + | chr1.3:55204214-55204233 | MS.gene85601:intron | 35.0% |
| !!! | TCTTGTCATTTTAGAAGGGA+TGG | + | chr1.3:55204866-55204885 | MS.gene85601:CDS | 35.0% |
| AACAGAGGGAGTAGTTGATT+GGG | + | chr1.3:55205223-55205242 | MS.gene85601:intron | 40.0% | |
| AAGAAAGATCCTGCAAGTCA+TGG | + | chr1.3:55202705-55202724 | MS.gene85601:CDS | 40.0% | |
| AAGTGACAGAAAGGAACGAA+AGG | - | chr1.3:55205015-55205034 | None:intergenic | 40.0% | |
| AATGGTGCATGCTGAGTATT+TGG | - | chr1.3:55202230-55202249 | None:intergenic | 40.0% | |
| ACTGACACATCTCTTATGAC+AGG | + | chr1.3:55205366-55205385 | MS.gene85601:intron | 40.0% | |
| CAAGATCTACATCACTGGTA+AGG | - | chr1.3:55204851-55204870 | None:intergenic | 40.0% | |
| CTGACACATCTCTTATGACA+GGG | + | chr1.3:55205367-55205386 | MS.gene85601:intron | 40.0% | |
| CTGCAAGCTTCAAGAAATTG+AGG | - | chr1.3:55203691-55203710 | None:intergenic | 40.0% | |
| GAGTAAGAAGTCGTGGAAAA+AGG | + | chr1.3:55203811-55203830 | MS.gene85601:CDS | 40.0% | |
| GCAAGCTTCAAGAAATTGAG+GGG | - | chr1.3:55203689-55203708 | None:intergenic | 40.0% | |
| GCAATCAACATGACAGAGTT+AGG | - | chr1.3:55204594-55204613 | None:intergenic | 40.0% | |
| GCCTGATGTTTATGAGAAAC+AGG | - | chr1.3:55202579-55202598 | None:intergenic | 40.0% | |
| GGAAAAAGGCAAGTGTCATA+TGG | + | chr1.3:55203825-55203844 | MS.gene85601:intron | 40.0% | |
| GTCCTTCTTCATCCTTTAAC+TGG | - | chr1.3:55204616-55204635 | None:intergenic | 40.0% | |
| GTGAGATCATACTTGTAGGA+GGG | - | chr1.3:55202334-55202353 | None:intergenic | 40.0% | |
| GTGTCTATATTTGTGGACAG+AGG | + | chr1.3:55204123-55204142 | MS.gene85601:intron | 40.0% | |
| TCAAGAAATTCTGCAACCTC+AGG | - | chr1.3:55205560-55205579 | None:intergenic | 40.0% | |
| TCAAGGTCATCGATAATCCA+TGG | - | chr1.3:55203773-55203792 | None:intergenic | 40.0% | |
| TGACACATCTCTTATGACAG+GGG | + | chr1.3:55205368-55205387 | MS.gene85601:intron | 40.0% | |
| TGAGATCATACTTGTAGGAG+GGG | - | chr1.3:55202333-55202352 | None:intergenic | 40.0% | |
| TGCCAGTTAAAGGATGAAGA+AGG | + | chr1.3:55204611-55204630 | MS.gene85601:intron | 40.0% | |
| TGGATAAATCTCCTAGACAG+TGG | + | chr1.3:55202304-55202323 | MS.gene85601:CDS | 40.0% | |
| TGTGAGATCATACTTGTAGG+AGG | - | chr1.3:55202335-55202354 | None:intergenic | 40.0% | |
| ! | CCCTTTTCGTTTACTTTGAG+AGG | + | chr1.3:55202534-55202553 | MS.gene85601:intron | 40.0% |
| ! | TTTGTTCACTTCTGGTGTTG+TGG | + | chr1.3:55203406-55203425 | MS.gene85601:intron | 40.0% |
| !! | TCAGCTTTATTTGCAGCATC+AGG | - | chr1.3:55202470-55202489 | None:intergenic | 40.0% |
| !!! | TAGGGATGGAATGTCGTTTT+CGG | + | chr1.3:55203721-55203740 | MS.gene85601:CDS | 40.0% |
| AAAATCTTCTCCCTCGACCA+TGG | + | chr1.3:55203753-55203772 | MS.gene85601:CDS | 45.0% | |
| AATGTGTTGCAGGCAATACC+TGG | + | chr1.3:55204290-55204309 | MS.gene85601:intron | 45.0% | |
| ACAGGCTGAAGAGAATGCAA+AGG | + | chr1.3:55203237-55203256 | MS.gene85601:intron | 45.0% | |
| ACTACACGTGGATCATCAGA+AGG | - | chr1.3:55202265-55202284 | None:intergenic | 45.0% | |
| AGCTTGCAGAAGCTTTCTCT+AGG | + | chr1.3:55203702-55203721 | MS.gene85601:intron | 45.0% | |
| CACGTGCAAAACACGTCATA+TGG | - | chr1.3:55204195-55204214 | None:intergenic | 45.0% | |
| CATCGATAATCCATGGTCGA+GGG | - | chr1.3:55203766-55203785 | None:intergenic | 45.0% | |
| CATTAAGATAGGGGATGGAG+TGG | + | chr1.3:55203146-55203165 | MS.gene85601:intron | 45.0% | |
| CTACACGTGGATCATCAGAA+GGG | - | chr1.3:55202264-55202283 | None:intergenic | 45.0% | |
| CTCACAAACCGAGAAAGAGA+TGG | + | chr1.3:55203474-55203493 | MS.gene85601:intron | 45.0% | |
| CTTACAGGTGAAACATCCTG+AGG | + | chr1.3:55205541-55205560 | MS.gene85601:intron | 45.0% | |
| GAACAGAGGGAGTAGTTGAT+TGG | + | chr1.3:55205222-55205241 | MS.gene85601:intron | 45.0% | |
| GATGAAGAAGGACGTCTCTT+GGG | + | chr1.3:55204623-55204642 | MS.gene85601:CDS | 45.0% | |
| GCAGGGAACGTATTTGATCT+TGG | + | chr1.3:55203349-55203368 | MS.gene85601:CDS | 45.0% | |
| GCTTCTATGTAGACTTCGTG+AGG | + | chr1.3:55202873-55202892 | MS.gene85601:intron | 45.0% | |
| GCTTGCACTGTCTTTATCCT+AGG | + | chr1.3:55202597-55202616 | MS.gene85601:intron | 45.0% | |
| GCTTGCAGAAGCTTTCTCTA+GGG | + | chr1.3:55203703-55203722 | MS.gene85601:intron | 45.0% | |
| GGCAAGTAGTAGATCACAGT+TGG | + | chr1.3:55202168-55202187 | MS.gene85601:CDS | 45.0% | |
| TCAGATGGAGTAAGAAGTCG+TGG | + | chr1.3:55203804-55203823 | MS.gene85601:CDS | 45.0% | |
| TCATCGATAATCCATGGTCG+AGG | - | chr1.3:55203767-55203786 | None:intergenic | 45.0% | |
| ! | ATTTGATCTTGGTTCTCCCC+AGG | + | chr1.3:55203360-55203379 | MS.gene85601:CDS | 45.0% |
| ! | TCTCGAATTGCTTTGAGTGC+AGG | + | chr1.3:55204446-55204465 | MS.gene85601:intron | 45.0% |
| !! | GCTTTGAGTGCAGGTTGTTT+TGG | + | chr1.3:55204455-55204474 | MS.gene85601:intron | 45.0% |
| ACTCAGCATGCACCATTCCT+TGG | + | chr1.3:55202233-55202252 | MS.gene85601:CDS | 50.0% | |
| AGAAGGGAACCTCCAAGGAA+TGG | - | chr1.3:55202248-55202267 | None:intergenic | 50.0% | |
| CATTTGCAAGGGAGCTCCTT+CGG | + | chr1.3:55203991-55204010 | MS.gene85601:CDS | 50.0% | |
| CCCCTTTCTACAAAGCCTAG+CGG | + | chr1.3:55204970-55204989 | MS.gene85601:intron | 50.0% | |
| GGATGAAGAAGGACGTCTCT+TGG | + | chr1.3:55204622-55204641 | MS.gene85601:CDS | 50.0% | |
| GGGAAGGATGAGGTGGATAA+TGG | + | chr1.3:55204237-55204256 | MS.gene85601:intron | 50.0% | |
| GTTGTGTGAATTTCGCCGCT+AGG | - | chr1.3:55204988-55205007 | None:intergenic | 50.0% | |
| TCACTCCCACCGAGTTATCT+TGG | + | chr1.3:55202284-55202303 | MS.gene85601:CDS | 50.0% | |
| TCATCAGAAGGGAACCTCCA+AGG | - | chr1.3:55202253-55202272 | None:intergenic | 50.0% | |
| ! | CCGCTAGGCTTTGTAGAAAG+GGG | - | chr1.3:55204973-55204992 | None:intergenic | 50.0% |
| ! | GCAGAAGCTTTCTCTAGGGA+TGG | + | chr1.3:55203707-55203726 | MS.gene85601:CDS | 50.0% |
| ! | GCCGCTAGGCTTTGTAGAAA+GGG | - | chr1.3:55204974-55204993 | None:intergenic | 50.0% |
| !!! | TGTGTTTTAGCAGTGGGGGA+AGG | + | chr1.3:55204221-55204240 | MS.gene85601:intron | 50.0% |
| AGGAGGGGATACCACTGTCT+AGG | - | chr1.3:55202318-55202337 | None:intergenic | 55.0% | |
| CAGCATGCACCATTCCTTGG+AGG | + | chr1.3:55202236-55202255 | MS.gene85601:CDS | 55.0% | |
| CATCTCTTATGACAGGGGCG+TGG | + | chr1.3:55205373-55205392 | MS.gene85601:intron | 55.0% | |
| CGAAGGAGCTCCCTTGCAAA+TGG | - | chr1.3:55203993-55204012 | None:intergenic | 55.0% | |
| TTAGCAGTGGGGGAAGGATG+AGG | + | chr1.3:55204227-55204246 | MS.gene85601:intron | 55.0% | |
| ! | AGAGGATCGCCATGACTTGC+AGG | - | chr1.3:55202717-55202736 | None:intergenic | 55.0% |
| ! | CGCCGCTAGGCTTTGTAGAA+AGG | - | chr1.3:55204975-55204994 | None:intergenic | 55.0% |
| AAACCTGACTCCCACGCCGA+AGG | - | chr1.3:55204010-55204029 | None:intergenic | 60.0% | |
| TCGGTGGGAGTGACTACACG+TGG | - | chr1.3:55202277-55202296 | None:intergenic | 60.0% | |
| CAAGGGAGCTCCTTCGGCGT+GGG | + | chr1.3:55203997-55204016 | MS.gene85601:CDS | 65.0% | |
| GCAGTGGGGGAAGGATGAGG+TGG | + | chr1.3:55204230-55204249 | MS.gene85601:intron | 65.0% | |
| GCAAGGGAGCTCCTTCGGCG+TGG | + | chr1.3:55203996-55204015 | MS.gene85601:CDS | 70.0% | |
| GCTCCTTCGGCGTGGGAGTC+AGG | + | chr1.3:55204004-55204023 | MS.gene85601:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55202166 | 55205622 | 55202166 | ID=MS.gene85601 |
| chr1.3 | mRNA | 55202166 | 55205622 | 55202166 | ID=MS.gene85601.t1;Parent=MS.gene85601 |
| chr1.3 | exon | 55202166 | 55202341 | 55202166 | ID=MS.gene85601.t1.exon1;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55202166 | 55202341 | 55202166 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55202439 | 55202504 | 55202439 | ID=MS.gene85601.t1.exon2;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55202439 | 55202504 | 55202439 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55202680 | 55202746 | 55202680 | ID=MS.gene85601.t1.exon3;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55202680 | 55202746 | 55202680 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55202874 | 55202942 | 55202874 | ID=MS.gene85601.t1.exon4;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55202874 | 55202942 | 55202874 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55203241 | 55203381 | 55203241 | ID=MS.gene85601.t1.exon5;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55203241 | 55203381 | 55203241 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55203704 | 55203832 | 55203704 | ID=MS.gene85601.t1.exon6;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55203704 | 55203832 | 55203704 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55203939 | 55204025 | 55203939 | ID=MS.gene85601.t1.exon7;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55203939 | 55204025 | 55203939 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55204468 | 55204542 | 55204468 | ID=MS.gene85601.t1.exon8;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55204468 | 55204542 | 55204468 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55204617 | 55204694 | 55204617 | ID=MS.gene85601.t1.exon9;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55204617 | 55204694 | 55204617 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55204810 | 55204887 | 55204810 | ID=MS.gene85601.t1.exon10;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55204810 | 55204887 | 55204810 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55205388 | 55205450 | 55205388 | ID=MS.gene85601.t1.exon11;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55205388 | 55205450 | 55205388 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| chr1.3 | exon | 55205548 | 55205622 | 55205548 | ID=MS.gene85601.t1.exon12;Parent=MS.gene85601.t1 |
| chr1.3 | CDS | 55205548 | 55205622 | 55205548 | ID=cds.MS.gene85601.t1;Parent=MS.gene85601.t1 |
| Gene Sequence |
| Protein sequence |
