Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50561.t1 | XP_003590558.1 | 97.4 | 343 | 9 | 0 | 1 | 343 | 5 | 347 | 1.90E-196 | 694.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50561.t1 | Q9LY74 | 83.4 | 326 | 50 | 3 | 20 | 343 | 15 | 338 | 1.1e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50561.t1 | G7ICQ0 | 97.4 | 343 | 9 | 0 | 1 | 343 | 5 | 347 | 1.4e-196 | 694.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene50561 | 0.841712 | 4.02E-58 | -1.69E-46 |
| MS.gene049171 | MS.gene50561 | 0.877252 | 7.29E-69 | -1.69E-46 |
| MS.gene049173 | MS.gene50561 | 0.866516 | 2.69E-65 | -1.69E-46 |
| MS.gene049217 | MS.gene50561 | 0.905576 | 3.71E-80 | -1.69E-46 |
| MS.gene049222 | MS.gene50561 | 0.87448 | 6.54E-68 | -1.69E-46 |
| MS.gene049232 | MS.gene50561 | 0.840321 | 9.33E-58 | -1.69E-46 |
| MS.gene049265 | MS.gene50561 | -0.811944 | 5.43E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene50561 | 0.885015 | 1.17E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene50561 | 0.872205 | 3.80E-67 | -1.69E-46 |
| MS.gene049356 | MS.gene50561 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene50561 | 0.850295 | 1.86E-60 | -1.69E-46 |
| MS.gene04938 | MS.gene50561 | 0.835117 | 2.02E-56 | -1.69E-46 |
| MS.gene049396 | MS.gene50561 | 0.816433 | 5.54E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene50561 | 0.875988 | 2.00E-68 | -1.69E-46 |
| MS.gene049425 | MS.gene50561 | -0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene50561 | 0.8524 | 4.73E-61 | -1.69E-46 |
| MS.gene049488 | MS.gene50561 | 0.828069 | 1.10E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene50561 | 0.883258 | 5.23E-71 | -1.69E-46 |
| MS.gene049611 | MS.gene50561 | -0.810469 | 1.13E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene50561 | 0.884151 | 2.45E-71 | -1.69E-46 |
| MS.gene049634 | MS.gene50561 | -0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene50561 | 0.900212 | 9.18E-78 | -1.69E-46 |
| MS.gene050095 | MS.gene50561 | -0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene50561 | 0.82111 | 4.80E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene50561 | 0.870724 | 1.18E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene50561 | 0.862828 | 3.84E-64 | -1.69E-46 |
| MS.gene050216 | MS.gene50561 | 0.813082 | 3.07E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene50561 | 0.842738 | 2.15E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene50561 | 0.878311 | 3.11E-69 | -1.69E-46 |
| MS.gene050381 | MS.gene50561 | -0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene50561 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene50561 | 0.858962 | 5.74E-63 | -1.69E-46 |
| MS.gene050475 | MS.gene50561 | -0.835138 | 2.00E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene50561 | 0.807137 | 5.85E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene50561 | 0.811562 | 6.58E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene50561 | 0.857076 | 2.09E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene50561 | 0.845258 | 4.54E-59 | -1.69E-46 |
| MS.gene050520 | MS.gene50561 | 0.802622 | 5.14E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene50561 | 0.810731 | 9.96E-51 | -1.69E-46 |
| MS.gene050541 | MS.gene50561 | -0.833599 | 4.86E-56 | -1.69E-46 |
| MS.gene050577 | MS.gene50561 | 0.812823 | 3.49E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene50561 | 0.867423 | 1.38E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene50561 | 0.874629 | 5.82E-68 | -1.69E-46 |
| MS.gene050647 | MS.gene50561 | -0.813713 | 2.23E-51 | -1.69E-46 |
| MS.gene050662 | MS.gene50561 | 0.838704 | 2.46E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene50561 | 0.866103 | 3.64E-65 | -1.69E-46 |
| MS.gene050686 | MS.gene50561 | 0.823089 | 1.67E-53 | -1.69E-46 |
| MS.gene050690 | MS.gene50561 | 0.809261 | 2.07E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene50561 | 0.864659 | 1.04E-64 | -1.69E-46 |
| MS.gene050747 | MS.gene50561 | 0.861636 | 8.93E-64 | -1.69E-46 |
| MS.gene050767 | MS.gene50561 | 0.812116 | 4.98E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene50561 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene50561 | 0.907324 | 5.73E-81 | -1.69E-46 |
| MS.gene050809 | MS.gene50561 | -0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene50561 | 0.860843 | 1.56E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene50561 | 0.839013 | 2.04E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene50561 | 0.841904 | 3.58E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene50561 | 0.84108 | 5.90E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene50561 | 0.857073 | 2.09E-62 | -1.69E-46 |
| MS.gene050986 | MS.gene50561 | 0.851446 | 8.83E-61 | -1.69E-46 |
| MS.gene05100 | MS.gene50561 | 0.837563 | 4.83E-57 | -1.69E-46 |
| MS.gene05104 | MS.gene50561 | -0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene50561 | 0.839464 | 1.56E-57 | -1.69E-46 |
| MS.gene051228 | MS.gene50561 | 0.851416 | 9.00E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene50561 | 0.815608 | 8.47E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene50561 | -0.80019 | 1.62E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene50561 | 0.828144 | 1.06E-54 | -1.69E-46 |
| MS.gene051434 | MS.gene50561 | 0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene051509 | MS.gene50561 | 0.800001 | 1.77E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene50561 | 0.83156 | 1.56E-55 | -1.69E-46 |
| MS.gene051617 | MS.gene50561 | 0.804646 | 1.95E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene50561 | 0.850715 | 1.42E-60 | -1.69E-46 |
| MS.gene051692 | MS.gene50561 | 0.863811 | 1.91E-64 | -1.69E-46 |
| MS.gene051694 | MS.gene50561 | 0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene051734 | MS.gene50561 | 0.824756 | 6.79E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene50561 | 0.879886 | 8.64E-70 | -1.69E-46 |
| MS.gene051838 | MS.gene50561 | 0.845247 | 4.58E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene50561 | 0.890878 | 6.61E-74 | -1.69E-46 |
| MS.gene051874 | MS.gene50561 | 0.826101 | 3.26E-54 | -1.69E-46 |
| MS.gene051949 | MS.gene50561 | 0.807265 | 5.50E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene50561 | 0.834567 | 2.78E-56 | -1.69E-46 |
| MS.gene052271 | MS.gene50561 | 0.88093 | 3.66E-70 | -1.69E-46 |
| MS.gene052310 | MS.gene50561 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene50561 | 0.87726 | 7.25E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene50561 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene50561 | 0.835764 | 1.39E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene50561 | 0.850146 | 2.05E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene50561 | 0.880583 | 4.87E-70 | -1.69E-46 |
| MS.gene052485 | MS.gene50561 | 0.807317 | 5.36E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene50561 | 0.813969 | 1.96E-51 | -1.69E-46 |
| MS.gene052501 | MS.gene50561 | 0.826677 | 2.38E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene50561 | 0.85127 | 9.90E-61 | -1.69E-46 |
| MS.gene052505 | MS.gene50561 | 0.816206 | 6.23E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene50561 | 0.823658 | 1.23E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene50561 | 0.907638 | 4.08E-81 | -1.69E-46 |
| MS.gene052632 | MS.gene50561 | 0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene50561 | 0.829209 | 5.85E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene50561 | 0.836785 | 7.64E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene50561 | 0.833559 | 4.98E-56 | -1.69E-46 |
| MS.gene052870 | MS.gene50561 | 0.853853 | 1.82E-61 | -1.69E-46 |
| MS.gene052872 | MS.gene50561 | 0.863997 | 1.67E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene50561 | 0.863839 | 1.87E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene50561 | 0.873707 | 1.19E-67 | -1.69E-46 |
| MS.gene052982 | MS.gene50561 | 0.804492 | 2.10E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene50561 | 0.821359 | 4.21E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene50561 | 0.839365 | 1.66E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene50561 | 0.858301 | 9.05E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene50561 | 0.835327 | 1.79E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene50561 | 0.868723 | 5.28E-66 | -1.69E-46 |
| MS.gene053209 | MS.gene50561 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene50561 | 0.881715 | 1.91E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene50561 | 0.870728 | 1.17E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene50561 | 0.867389 | 1.42E-65 | -1.69E-46 |
| MS.gene053384 | MS.gene50561 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene50561 | 0.823913 | 1.07E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene50561 | 0.876794 | 1.05E-68 | -1.69E-46 |
| MS.gene053479 | MS.gene50561 | 0.805071 | 1.59E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene50561 | 0.824743 | 6.84E-54 | -1.69E-46 |
| MS.gene053488 | MS.gene50561 | -0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene50561 | -0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene50561 | 0.864137 | 1.51E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene50561 | 0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene50561 | 0.879888 | 8.62E-70 | -1.69E-46 |
| MS.gene053758 | MS.gene50561 | 0.805731 | 1.16E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene50561 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene50561 | 0.874398 | 6.97E-68 | -1.69E-46 |
| MS.gene053912 | MS.gene50561 | 0.867479 | 1.33E-65 | -1.69E-46 |
| MS.gene053915 | MS.gene50561 | 0.815858 | 7.45E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene50561 | 0.853175 | 2.84E-61 | -1.69E-46 |
| MS.gene054003 | MS.gene50561 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene50561 | 0.845957 | 2.94E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene50561 | 0.85645 | 3.19E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene50561 | 0.874522 | 6.33E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene50561 | 0.88611 | 4.55E-72 | -1.69E-46 |
| MS.gene054706 | MS.gene50561 | -0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene054707 | MS.gene50561 | -0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene50561 | 0.806356 | 8.56E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene50561 | 0.833922 | 4.04E-56 | -1.69E-46 |
| MS.gene05494 | MS.gene50561 | 0.835964 | 1.23E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene50561 | 0.863152 | 3.05E-64 | -1.69E-46 |
| MS.gene054955 | MS.gene50561 | 0.805921 | 1.06E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene50561 | 0.859914 | 2.97E-63 | -1.69E-46 |
| MS.gene055154 | MS.gene50561 | -0.823673 | 1.22E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene50561 | 0.894743 | 1.85E-75 | -1.69E-46 |
| MS.gene055212 | MS.gene50561 | 0.827321 | 1.67E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene50561 | 0.823726 | 1.19E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene50561 | 0.848062 | 7.78E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene50561 | 0.873153 | 1.83E-67 | -1.69E-46 |
| MS.gene055397 | MS.gene50561 | 0.841021 | 6.12E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene50561 | 0.817333 | 3.48E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene50561 | 0.83142 | 1.69E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene50561 | 0.895468 | 9.31E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene50561 | 0.86466 | 1.04E-64 | -1.69E-46 |
| MS.gene055636 | MS.gene50561 | 0.879018 | 1.75E-69 | -1.69E-46 |
| MS.gene055638 | MS.gene50561 | 0.868059 | 8.65E-66 | -1.69E-46 |
| MS.gene055647 | MS.gene50561 | 0.880396 | 5.68E-70 | -1.69E-46 |
| MS.gene055722 | MS.gene50561 | 0.905294 | 5.00E-80 | -1.69E-46 |
| MS.gene055748 | MS.gene50561 | 0.809229 | 2.10E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene50561 | 0.809961 | 1.46E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene50561 | 0.805345 | 1.40E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene50561 | 0.843327 | 1.50E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene50561 | 0.861568 | 9.37E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene50561 | 0.882922 | 6.94E-71 | -1.69E-46 |
| MS.gene055956 | MS.gene50561 | -0.821987 | 3.01E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene50561 | 0.832632 | 8.46E-56 | -1.69E-46 |
| MS.gene056166 | MS.gene50561 | 0.845743 | 3.36E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene50561 | 0.860504 | 1.97E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene50561 | 0.808207 | 3.47E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene50561 | 0.83489 | 2.31E-56 | -1.69E-46 |
| MS.gene056448 | MS.gene50561 | 0.832612 | 8.56E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene50561 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene50561 | 0.844334 | 8.06E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene50561 | 0.858465 | 8.09E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene50561 | 0.86793 | 9.52E-66 | -1.69E-46 |
| MS.gene056511 | MS.gene50561 | 0.84634 | 2.31E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene50561 | 0.870166 | 1.79E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene50561 | 0.847495 | 1.12E-59 | -1.69E-46 |
| MS.gene056611 | MS.gene50561 | 0.801295 | 9.63E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene50561 | 0.886403 | 3.53E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene50561 | 0.819687 | 1.02E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene50561 | 0.822234 | 2.64E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene50561 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene50561 | 0.867709 | 1.12E-65 | -1.69E-46 |
| MS.gene057011 | MS.gene50561 | 0.830186 | 3.38E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene50561 | 0.890915 | 6.40E-74 | -1.69E-46 |
| MS.gene057086 | MS.gene50561 | 0.848845 | 4.73E-60 | -1.69E-46 |
| MS.gene057124 | MS.gene50561 | 0.807848 | 4.14E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene50561 | 0.865678 | 4.96E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene50561 | 0.85121 | 1.03E-60 | -1.69E-46 |
| MS.gene057285 | MS.gene50561 | 0.802455 | 5.56E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene50561 | 0.853861 | 1.81E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene50561 | 0.884722 | 1.50E-71 | -1.69E-46 |
| MS.gene057658 | MS.gene50561 | 0.809615 | 1.73E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene50561 | 0.838103 | 3.51E-57 | -1.69E-46 |
| MS.gene057805 | MS.gene50561 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene50561 | 0.803817 | 2.91E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene50561 | 0.851025 | 1.16E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene50561 | 0.840702 | 7.41E-58 | -1.69E-46 |
| MS.gene057857 | MS.gene50561 | 0.835795 | 1.36E-56 | -1.69E-46 |
| MS.gene057926 | MS.gene50561 | 0.844719 | 6.35E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene50561 | 0.815406 | 9.40E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene50561 | 0.861305 | 1.13E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene50561 | 0.833983 | 3.90E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene50561 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene50561 | 0.858194 | 9.74E-63 | -1.69E-46 |
| MS.gene05837 | MS.gene50561 | 0.851784 | 7.08E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene50561 | 0.894593 | 2.13E-75 | -1.69E-46 |
| MS.gene058444 | MS.gene50561 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene50561 | 0.853336 | 2.56E-61 | -1.69E-46 |
| MS.gene058588 | MS.gene50561 | 0.841981 | 3.42E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene50561 | 0.842186 | 3.02E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene50561 | 0.86934 | 3.33E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene50561 | 0.861557 | 9.44E-64 | -1.69E-46 |
| MS.gene05883 | MS.gene50561 | 0.852775 | 3.70E-61 | -1.69E-46 |
| MS.gene058840 | MS.gene50561 | -0.830279 | 3.21E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene50561 | 0.841743 | 3.95E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene50561 | 0.875582 | 2.75E-68 | -1.69E-46 |
| MS.gene059023 | MS.gene50561 | 0.869955 | 2.10E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene50561 | 0.859103 | 5.21E-63 | -1.69E-46 |
| MS.gene059079 | MS.gene50561 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene05912 | MS.gene50561 | 0.805229 | 1.48E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene50561 | 0.862817 | 3.87E-64 | -1.69E-46 |
| MS.gene059305 | MS.gene50561 | 0.839896 | 1.20E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene50561 | 0.857099 | 2.06E-62 | -1.69E-46 |
| MS.gene059366 | MS.gene50561 | 0.809863 | 1.53E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene50561 | 0.838503 | 2.77E-57 | -1.69E-46 |
| MS.gene059368 | MS.gene50561 | 0.822701 | 2.06E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene50561 | 0.862606 | 4.50E-64 | -1.69E-46 |
| MS.gene059526 | MS.gene50561 | -0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene50561 | 0.877119 | 8.11E-69 | -1.69E-46 |
| MS.gene059674 | MS.gene50561 | 0.825683 | 4.10E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene50561 | 0.81259 | 3.93E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene50561 | 0.878386 | 2.93E-69 | -1.69E-46 |
| MS.gene059688 | MS.gene50561 | 0.819114 | 1.38E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene50561 | 0.80676 | 7.03E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene50561 | 0.807632 | 4.60E-50 | -1.69E-46 |
| MS.gene059699 | MS.gene50561 | -0.802614 | 5.16E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene50561 | -0.803458 | 3.45E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene50561 | 0.85303 | 3.13E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene50561 | 0.883835 | 3.21E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene50561 | 0.837939 | 3.86E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene50561 | 0.845529 | 3.84E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene50561 | 0.859364 | 4.35E-63 | -1.69E-46 |
| MS.gene059902 | MS.gene50561 | 0.886517 | 3.19E-72 | -1.69E-46 |
| MS.gene059960 | MS.gene50561 | 0.854106 | 1.54E-61 | -1.69E-46 |
| MS.gene060193 | MS.gene50561 | 0.818485 | 1.91E-52 | -1.69E-46 |
| MS.gene060341 | MS.gene50561 | 0.829953 | 3.86E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene50561 | 0.800039 | 1.74E-48 | -1.69E-46 |
| MS.gene060469 | MS.gene50561 | 0.827694 | 1.36E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene50561 | 0.85862 | 7.27E-63 | -1.69E-46 |
| MS.gene060703 | MS.gene50561 | 0.84499 | 5.37E-59 | -1.69E-46 |
| MS.gene060727 | MS.gene50561 | 0.836883 | 7.21E-57 | -1.69E-46 |
| MS.gene060728 | MS.gene50561 | 0.818593 | 1.81E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene50561 | 0.879835 | 9.01E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene50561 | 0.830285 | 3.20E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene50561 | 0.837029 | 6.61E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene50561 | 0.858911 | 5.95E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene50561 | 0.909193 | 7.46E-82 | -1.69E-46 |
| MS.gene060832 | MS.gene50561 | 0.80184 | 7.45E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene50561 | 0.872039 | 4.32E-67 | -1.69E-46 |
| MS.gene060837 | MS.gene50561 | 0.865462 | 5.80E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene50561 | 0.85043 | 1.71E-60 | -1.69E-46 |
| MS.gene060981 | MS.gene50561 | 0.841914 | 3.56E-58 | -1.69E-46 |
| MS.gene060982 | MS.gene50561 | 0.85149 | 8.58E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene50561 | 0.863759 | 1.98E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene50561 | 0.849741 | 2.66E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene50561 | 0.861947 | 7.17E-64 | -1.69E-46 |
| MS.gene061171 | MS.gene50561 | 0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene50561 | 0.866467 | 2.79E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50561.t1 | MTR_1g071110 | 97.376 | 343 | 9 | 0 | 1 | 343 | 5 | 347 | 0.0 | 696 |
| MS.gene50561.t1 | MTR_1g076570 | 76.012 | 346 | 70 | 3 | 1 | 343 | 5 | 340 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50561.t1 | AT3G63410 | 79.762 | 336 | 64 | 3 | 10 | 343 | 5 | 338 | 0.0 | 511 |
Find 85 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAACTCCACGATACCATTT+TGG | 0.111746 | 1.2:-54442161 | None:intergenic |
| AACCAAACCCATTTCCATTT+TGG | 0.136694 | 1.2:-54440842 | None:intergenic |
| TCGATATACTCTTCTTCTTT+AGG | 0.193738 | 1.2:-54442089 | None:intergenic |
| CAAGAATCAATGCTAAAATT+AGG | 0.196925 | 1.2:+54440910 | MS.gene50561:CDS |
| TCGCCGTCATGGCTTGATTA+TGG | 0.203458 | 1.2:+54442181 | MS.gene50561:CDS |
| GTTTACGAAGGCAGGGTTTA+AGG | 0.206012 | 1.2:+54442115 | MS.gene50561:CDS |
| CGATATACTCTTCTTCTTTA+GGG | 0.222755 | 1.2:-54442088 | None:intergenic |
| CTCTCAGATTGGCTGATCTT+TGG | 0.227283 | 1.2:-54443680 | None:intergenic |
| TACAATGTTTCTCTTCAAAT+TGG | 0.240007 | 1.2:-54440937 | None:intergenic |
| GTCCTGTCTACCCGACATTT+TGG | 0.244718 | 1.2:+54442030 | MS.gene50561:CDS |
| TTGAATTGCAAAACCCAAAA+TGG | 0.251263 | 1.2:+54440828 | MS.gene50561:CDS |
| CGCCGTCATGGCTTGATTAT+GGG | 0.259408 | 1.2:+54442182 | MS.gene50561:CDS |
| ATCTGGGGATTCTCCTTTGC+AGG | 0.267355 | 1.2:+54442232 | MS.gene50561:CDS |
| CGCGTTTCTTCGCAGATGTT+TGG | 0.268470 | 1.2:+54442057 | MS.gene50561:CDS |
| TTAAGGATGTCCAGCTAAAA+AGG | 0.270534 | 1.2:+54442132 | MS.gene50561:CDS |
| TCTCAGATTGGCTGATCTTT+GGG | 0.280706 | 1.2:-54443679 | None:intergenic |
| AAGAAGACAAAGGGATTTAC+AGG | 0.286308 | 1.2:-54443574 | None:intergenic |
| TTCTTACTGCGCTTTGCCTT+GGG | 0.316900 | 1.2:+54443592 | MS.gene50561:CDS |
| TCTTTGAGCCACATGTAAAT+AGG | 0.317118 | 1.2:-54443646 | None:intergenic |
| CTTCTTACTGCGCTTTGCCT+TGG | 0.324170 | 1.2:+54443591 | MS.gene50561:CDS |
| AAGAATCAATGCTAAAATTA+GGG | 0.329851 | 1.2:+54440911 | MS.gene50561:CDS |
| TGTTTCTCAGCATTGAATAC+TGG | 0.338472 | 1.2:+54441937 | MS.gene50561:intron |
| TGCAAAACCCAAAATGGAAA+TGG | 0.342940 | 1.2:+54440834 | MS.gene50561:CDS |
| GTTGATGTTGGTGGTGGTAC+TGG | 0.349346 | 1.2:+54441158 | MS.gene50561:CDS |
| ACTGGTGTTAAGCCTGCATC+TGG | 0.356332 | 1.2:+54442215 | MS.gene50561:CDS |
| ACCCAAAATGGAAATGGGTT+TGG | 0.363731 | 1.2:+54440840 | MS.gene50561:CDS |
| TTGATGCCACGCTGTGGATC+TGG | 0.384823 | 1.2:-54441960 | None:intergenic |
| GGTACTGGTTTCACTACATT+GGG | 0.400200 | 1.2:+54441173 | MS.gene50561:CDS |
| ATAAACCTGGGTTGTGAACT+TGG | 0.409316 | 1.2:-54440993 | None:intergenic |
| AAGGATTGTAAAATTGTTGA+AGG | 0.409383 | 1.2:+54441284 | MS.gene50561:CDS |
| AAAGCAAAAGGAACCACTTA+AGG | 0.411490 | 1.2:+54441265 | MS.gene50561:CDS |
| ATGTTATAAACCCCGGTCAT+TGG | 0.420569 | 1.2:+54441072 | MS.gene50561:CDS |
| AATATGCTTGTTGTTGATGT+TGG | 0.423767 | 1.2:+54441146 | MS.gene50561:CDS |
| ATCGAGTGGTTTACGAAGGC+AGG | 0.431658 | 1.2:+54442107 | MS.gene50561:CDS |
| ATTATGGGTTGTTCTGTGAC+TGG | 0.435412 | 1.2:+54442197 | MS.gene50561:CDS |
| GCAAAACCCAAAATGGAAAT+GGG | 0.445634 | 1.2:+54440835 | MS.gene50561:CDS |
| ATGCTTGTTGTTGATGTTGG+TGG | 0.461058 | 1.2:+54441149 | MS.gene50561:CDS |
| GGAAATGGGTTTGGTTTCAC+AGG | 0.462226 | 1.2:+54440849 | MS.gene50561:CDS |
| AACCAAAATGTCGGGTAGAC+AGG | 0.473847 | 1.2:-54442032 | None:intergenic |
| TGGGCGTCCTAGCAGCTTCG+TGG | 0.475392 | 1.2:+54443611 | MS.gene50561:CDS |
| TTCCTATCAGTAAGTTCAGC+TGG | 0.478104 | 1.2:-54441125 | None:intergenic |
| TGGTACTGGTTTCACTACAT+TGG | 0.488035 | 1.2:+54441172 | MS.gene50561:CDS |
| CATATCTTCAGTCCAATGAC+CGG | 0.490893 | 1.2:-54441084 | None:intergenic |
| AGGATTGTAAAATTGTTGAA+GGG | 0.496213 | 1.2:+54441285 | MS.gene50561:CDS |
| GTGGCATCAAGGAAGCATAC+AGG | 0.498940 | 1.2:+54441973 | MS.gene50561:CDS |
| TTCACAGGTTCAGATTTCAA+TGG | 0.502460 | 1.2:+54440864 | MS.gene50561:CDS |
| CCTACAAATCTCTCTCAGAT+TGG | 0.504843 | 1.2:-54443691 | None:intergenic |
| CTTGTTGTTGATGTTGGTGG+TGG | 0.511570 | 1.2:+54441152 | MS.gene50561:CDS |
| AACCAGCTGAACTTACTGAT+AGG | 0.522090 | 1.2:+54441123 | MS.gene50561:CDS |
| TTTGCTGCAGCTTGGTCCAA+AGG | 0.523778 | 1.2:+54443534 | MS.gene50561:intron |
| CTGGTGTTAAGCCTGCATCT+GGG | 0.528996 | 1.2:+54442216 | MS.gene50561:CDS |
| AACGCGACAACCAAAATGTC+GGG | 0.531908 | 1.2:-54442040 | None:intergenic |
| GCTTGCTAAAGCAAAGCAAA+AGG | 0.534201 | 1.2:+54441253 | MS.gene50561:CDS |
| TATTGATTCCTATTTACATG+TGG | 0.537530 | 1.2:+54443638 | MS.gene50561:CDS |
| AAAGGAGAATCCCCAGATGC+AGG | 0.539061 | 1.2:-54442227 | None:intergenic |
| AGATCCACAGCGTGGCATCA+AGG | 0.554562 | 1.2:+54441962 | MS.gene50561:CDS |
| TATCGTGGAGTTCGCCGTCA+TGG | 0.558525 | 1.2:+54442170 | MS.gene50561:CDS |
| GGATTGTAAAATTGTTGAAG+GGG | 0.558559 | 1.2:+54441286 | MS.gene50561:CDS |
| AAGCGCAGTAAGAAGACAAA+GGG | 0.559888 | 1.2:-54443583 | None:intergenic |
| ATATCTTCAGTCCAATGACC+GGG | 0.562624 | 1.2:-54441083 | None:intergenic |
| TGGTGTTAAGCCTGCATCTG+GGG | 0.564309 | 1.2:+54442217 | MS.gene50561:CDS |
| ATACAAACCACGAAGCTGCT+AGG | 0.565899 | 1.2:-54443618 | None:intergenic |
| AAGATGACAAATACCTGCAA+AGG | 0.577073 | 1.2:-54442245 | None:intergenic |
| GCTGATAGATATGTGTCCGC+TGG | 0.579059 | 1.2:+54441341 | MS.gene50561:CDS |
| TCAGCATAATCAGTTCGAAA+GGG | 0.581535 | 1.2:-54441323 | None:intergenic |
| ATCAGCATAATCAGTTCGAA+AGG | 0.586784 | 1.2:-54441324 | None:intergenic |
| TCGAGTGGTTTACGAAGGCA+GGG | 0.588098 | 1.2:+54442108 | MS.gene50561:CDS |
| CAAGACCAAGTTCACAACCC+AGG | 0.594018 | 1.2:+54440988 | MS.gene50561:CDS |
| TTTGCTTTAGCAAGCTGATG+AGG | 0.594550 | 1.2:-54441245 | None:intergenic |
| ATAGATATGTGTCCGCTGGA+AGG | 0.594629 | 1.2:+54441345 | MS.gene50561:CDS |
| TGGCATCAAGGAAGCATACA+GGG | 0.598551 | 1.2:+54441974 | MS.gene50561:CDS |
| AAAGCGCAGTAAGAAGACAA+AGG | 0.601046 | 1.2:-54443584 | None:intergenic |
| CGAAGCTGCTAGGACGCCCA+AGG | 0.601692 | 1.2:-54443608 | None:intergenic |
| AACCCATAATCAAGCCATGA+CGG | 0.615385 | 1.2:-54442184 | None:intergenic |
| AAACGCGACAACCAAAATGT+CGG | 0.616259 | 1.2:-54442041 | None:intergenic |
| AATGACCGGGGTTTATAACA+TGG | 0.636109 | 1.2:-54441070 | None:intergenic |
| GCTTCCTTGATGCCACGCTG+TGG | 0.644008 | 1.2:-54441966 | None:intergenic |
| TATGACCATGTTATAAACCC+CGG | 0.661674 | 1.2:+54441065 | MS.gene50561:CDS |
| ATTGGCCCAAAATGGTATCG+TGG | 0.672762 | 1.2:+54442155 | MS.gene50561:CDS |
| GTATATCGAGTGGTTTACGA+AGG | 0.686187 | 1.2:+54442103 | MS.gene50561:CDS |
| ATGGCTTCACTAATGCTCAG+TGG | 0.694171 | 1.2:+54440786 | None:intergenic |
| TATCTTCAGTCCAATGACCG+GGG | 0.696574 | 1.2:-54441082 | None:intergenic |
| AAGAAGAAGAGTATATCGAG+TGG | 0.708626 | 1.2:+54442093 | MS.gene50561:CDS |
| GACATCGATATACCTTCCAG+CGG | 0.718494 | 1.2:-54441357 | None:intergenic |
| TACTGGCCAGATCCACAGCG+TGG | 0.734186 | 1.2:+54441954 | MS.gene50561:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTAGTTTTTTTTTTTTTTT+TGG | + | chr1.2:54441735-54441754 | MS.gene50561:intron | 10.0% |
| !!! | TTTAATTTTATTTTCAATTG+CGG | + | chr1.2:54443174-54443193 | MS.gene50561:intron | 10.0% |
| !! | ATAAAATTAAAAAACATACC+TGG | - | chr1.2:54443165-54443184 | None:intergenic | 15.0% |
| !!! | TTAATTTTATTTTCAATTGC+GGG | + | chr1.2:54443175-54443194 | MS.gene50561:intron | 15.0% |
| !! | AACCATGCATAATTATTTAA+AGG | - | chr1.2:54441414-54441433 | None:intergenic | 20.0% |
| !! | AAGAATCAATGCTAAAATTA+GGG | + | chr1.2:54440911-54440930 | MS.gene50561:CDS | 20.0% |
| !! | AAGTTTAACCATATTAAATG+TGG | + | chr1.2:54442918-54442937 | MS.gene50561:intron | 20.0% |
| !! | ATCATGTTTGATATTTAAGT+TGG | + | chr1.2:54442958-54442977 | MS.gene50561:intron | 20.0% |
| !! | ATTTGATTAAGCATAAAAGA+AGG | - | chr1.2:54442302-54442321 | None:intergenic | 20.0% |
| !! | CTATAACAAGAGAAAAATAA+AGG | - | chr1.2:54441635-54441654 | None:intergenic | 20.0% |
| !! | GAATAATAGATAGAAAAAAG+AGG | - | chr1.2:54442642-54442661 | None:intergenic | 20.0% |
| !! | TGATTTATTATTGTTAAGTG+TGG | + | chr1.2:54443059-54443078 | MS.gene50561:intron | 20.0% |
| !! | TTTATGCTTAATCAAATCAA+AGG | + | chr1.2:54442305-54442324 | MS.gene50561:intron | 20.0% |
| !! | TTTGATTAAGCATAAAAGAA+GGG | - | chr1.2:54442301-54442320 | None:intergenic | 20.0% |
| !!! | ATTTTTACATGAAATGACTA+TGG | + | chr1.2:54442777-54442796 | MS.gene50561:intron | 20.0% |
| !!! | GAATATAGAGATTTTGATTT+AGG | - | chr1.2:54443350-54443369 | None:intergenic | 20.0% |
| ! | AAGGATTGTAAAATTGTTGA+AGG | + | chr1.2:54441284-54441303 | MS.gene50561:CDS | 25.0% |
| ! | AAGTGTACATAGATATAAAG+TGG | + | chr1.2:54441799-54441818 | MS.gene50561:intron | 25.0% |
| ! | AGGATTGTAAAATTGTTGAA+GGG | + | chr1.2:54441285-54441304 | MS.gene50561:CDS | 25.0% |
| ! | ATCAGTAAGCATATAGATAT+AGG | - | chr1.2:54442759-54442778 | None:intergenic | 25.0% |
| ! | CAAGAATCAATGCTAAAATT+AGG | + | chr1.2:54440910-54440929 | MS.gene50561:CDS | 25.0% |
| ! | CATAAACACTATATGCTTTA+CGG | + | chr1.2:54442422-54442441 | MS.gene50561:intron | 25.0% |
| ! | GAAAAAAGAGGTAAACTTAA+AGG | - | chr1.2:54442630-54442649 | None:intergenic | 25.0% |
| ! | GTTGATATCAATGTAGATAT+GGG | + | chr1.2:54443138-54443157 | MS.gene50561:intron | 25.0% |
| ! | TACAATGTTTCTCTTCAAAT+TGG | - | chr1.2:54440940-54440959 | None:intergenic | 25.0% |
| ! | TCAGTAAGCATATAGATATA+GGG | - | chr1.2:54442758-54442777 | None:intergenic | 25.0% |
| !! | AATCAAAGGTATGTTGTATA+AGG | + | chr1.2:54442319-54442338 | MS.gene50561:intron | 25.0% |
| !! | ACAATTTTACAATCCTTAAG+TGG | - | chr1.2:54441281-54441300 | None:intergenic | 25.0% |
| !! | AGTTGATATCAATGTAGATA+TGG | + | chr1.2:54443137-54443156 | MS.gene50561:intron | 25.0% |
| !! | TTTTTGTGTTGTATAAACCT+GGG | - | chr1.2:54441008-54441027 | None:intergenic | 25.0% |
| !!! | AACACAAAAAAGAAGCATTT+TGG | + | chr1.2:54441018-54441037 | MS.gene50561:CDS | 25.0% |
| !!! | AAGAAGCATTTTGGTTTTAT+AGG | + | chr1.2:54441027-54441046 | MS.gene50561:CDS | 25.0% |
| !!! | ATGTTTGATATTTAAGTTGG+AGG | + | chr1.2:54442961-54442980 | MS.gene50561:intron | 25.0% |
| !!! | TAGCATTGATTCTTGTTTTT+GGG | - | chr1.2:54440905-54440924 | None:intergenic | 25.0% |
| !!! | TATTGATTCCTATTTACATG+TGG | + | chr1.2:54443638-54443657 | MS.gene50561:CDS | 25.0% |
| !!! | TTAGCATTGATTCTTGTTTT+TGG | - | chr1.2:54440906-54440925 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGTTGTATAAACC+TGG | - | chr1.2:54441009-54441028 | None:intergenic | 25.0% |
| AAAGAGGTAAACTTAAAGGA+TGG | - | chr1.2:54442626-54442645 | None:intergenic | 30.0% | |
| AAGAGGTAAACTTAAAGGAT+GGG | - | chr1.2:54442625-54442644 | None:intergenic | 30.0% | |
| ACATAAGGATTACAATTGGT+AGG | - | chr1.2:54443235-54443254 | None:intergenic | 30.0% | |
| ATCAAACATGATCACTTCAA+TGG | - | chr1.2:54442950-54442969 | None:intergenic | 30.0% | |
| ATTCAGCTTAACAAAGCTAT+AGG | + | chr1.2:54443366-54443385 | MS.gene50561:intron | 30.0% | |
| CAAGACATAAGGATTACAAT+TGG | - | chr1.2:54443239-54443258 | None:intergenic | 30.0% | |
| CAATTGTAATCCTTATGTCT+TGG | + | chr1.2:54443237-54443256 | MS.gene50561:intron | 30.0% | |
| CATAAGGATTACAATTGGTA+GGG | - | chr1.2:54443234-54443253 | None:intergenic | 30.0% | |
| CCAACAAAAAAACATGTACA+GGG | - | chr1.2:54442710-54442729 | None:intergenic | 30.0% | |
| CGATATACTCTTCTTCTTTA+GGG | - | chr1.2:54442091-54442110 | None:intergenic | 30.0% | |
| CGCCTTTAAATAATTATGCA+TGG | + | chr1.2:54441409-54441428 | MS.gene50561:intron | 30.0% | |
| CGTAAAGCATATAGTGTTTA+TGG | - | chr1.2:54442424-54442443 | None:intergenic | 30.0% | |
| GAGTTATGAACAAAACACTA+CGG | + | chr1.2:54443276-54443295 | MS.gene50561:intron | 30.0% | |
| GGAAGTTTCCACATTTAATA+TGG | - | chr1.2:54442929-54442948 | None:intergenic | 30.0% | |
| GGATTGTAAAATTGTTGAAG+GGG | + | chr1.2:54441286-54441305 | MS.gene50561:CDS | 30.0% | |
| TAACAAAGCTATAGGATTTG+AGG | + | chr1.2:54443374-54443393 | MS.gene50561:intron | 30.0% | |
| TCAAATAAGCCAATCCAAAT+AGG | - | chr1.2:54441494-54441513 | None:intergenic | 30.0% | |
| TCCAACAAAAAAACATGTAC+AGG | - | chr1.2:54442711-54442730 | None:intergenic | 30.0% | |
| TCGATATACTCTTCTTCTTT+AGG | - | chr1.2:54442092-54442111 | None:intergenic | 30.0% | |
| TTGAAATAGTCATCAGTTGA+GGG | - | chr1.2:54442475-54442494 | None:intergenic | 30.0% | |
| TTGAATTGCAAAACCCAAAA+TGG | + | chr1.2:54440828-54440847 | MS.gene50561:CDS | 30.0% | |
| ! | TGTTTTCGTATAAGCTATCT+TGG | - | chr1.2:54441607-54441626 | None:intergenic | 30.0% |
| ! | TTTGAAATAGTCATCAGTTG+AGG | - | chr1.2:54442476-54442495 | None:intergenic | 30.0% |
| ! | TTTTCAACATCTTCTTCCTT+TGG | - | chr1.2:54443553-54443572 | None:intergenic | 30.0% |
| !! | AAAGTAGATTGCTTTGAAAG+AGG | + | chr1.2:54441895-54441914 | MS.gene50561:intron | 30.0% |
| !! | AATATGCTTGTTGTTGATGT+TGG | + | chr1.2:54441146-54441165 | MS.gene50561:CDS | 30.0% |
| !! | TATAAGGTTGTTTCTCCTTA+TGG | + | chr1.2:54442335-54442354 | MS.gene50561:intron | 30.0% |
| !!! | AGCATTGATTCTTGTTTTTG+GGG | - | chr1.2:54440904-54440923 | None:intergenic | 30.0% |
| !!! | ATACAGGGTTTTGAAATTTG+GGG | + | chr1.2:54441989-54442008 | MS.gene50561:CDS | 30.0% |
| !!! | CATACAGGGTTTTGAAATTT+GGG | + | chr1.2:54441988-54442007 | MS.gene50561:CDS | 30.0% |
| !!! | TGTAAATCCCCTTTTTTATC+CGG | + | chr1.2:54442572-54442591 | MS.gene50561:intron | 30.0% |
| AAAAAAACTAAGCCACTGCT+TGG | - | chr1.2:54441727-54441746 | None:intergenic | 35.0% | |
| AAACACTATATGCTTTACGG+TGG | + | chr1.2:54442425-54442444 | MS.gene50561:intron | 35.0% | |
| AAAGCAAAAGGAACCACTTA+AGG | + | chr1.2:54441265-54441284 | MS.gene50561:CDS | 35.0% | |
| AACACTATATGCTTTACGGT+GGG | + | chr1.2:54442426-54442445 | MS.gene50561:intron | 35.0% | |
| AAGAAGACAAAGGGATTTAC+AGG | - | chr1.2:54443577-54443596 | None:intergenic | 35.0% | |
| AAGATGACAAATACCTGCAA+AGG | - | chr1.2:54442248-54442267 | None:intergenic | 35.0% | |
| ACTTACACTTCCAAGACATA+AGG | - | chr1.2:54443250-54443269 | None:intergenic | 35.0% | |
| ACTTCAATACCCATACTTGT+TGG | - | chr1.2:54443120-54443139 | None:intergenic | 35.0% | |
| AGTTTAGTACCCAACAAGTA+TGG | + | chr1.2:54443107-54443126 | MS.gene50561:intron | 35.0% | |
| ATCAGCATAATCAGTTCGAA+AGG | - | chr1.2:54441327-54441346 | None:intergenic | 35.0% | |
| ATGGTCAGTAAGTCATAACA+TGG | - | chr1.2:54442405-54442424 | None:intergenic | 35.0% | |
| CAATAGCCTTCAATGTTAAC+TGG | + | chr1.2:54443303-54443322 | MS.gene50561:intron | 35.0% | |
| CACACACAGATACTACAAAA+AGG | - | chr1.2:54442851-54442870 | None:intergenic | 35.0% | |
| CACTTATTACTTCCTTGCAT+TGG | + | chr1.2:54443431-54443450 | MS.gene50561:intron | 35.0% | |
| CTTCAATACCCATACTTGTT+GGG | - | chr1.2:54443119-54443138 | None:intergenic | 35.0% | |
| GCAAAACCCAAAATGGAAAT+GGG | + | chr1.2:54440835-54440854 | MS.gene50561:CDS | 35.0% | |
| GCTTATTTGAGCTCATTTAC+TGG | + | chr1.2:54441504-54441523 | MS.gene50561:intron | 35.0% | |
| GTAAACTTAAAGGATGGGAT+AGG | - | chr1.2:54442620-54442639 | None:intergenic | 35.0% | |
| GTAGGCACATCTAATCTAAA+AGG | - | chr1.2:54442519-54442538 | None:intergenic | 35.0% | |
| GTTCCTAAAATGTTGCAAGT+AGG | - | chr1.2:54442537-54442556 | None:intergenic | 35.0% | |
| GTTTAGTACCCAACAAGTAT+GGG | + | chr1.2:54443108-54443127 | MS.gene50561:intron | 35.0% | |
| TATGACCATGTTATAAACCC+CGG | + | chr1.2:54441065-54441084 | MS.gene50561:CDS | 35.0% | |
| TCAGCATAATCAGTTCGAAA+GGG | - | chr1.2:54441326-54441345 | None:intergenic | 35.0% | |
| TCAGTAAGTCATAACATGGT+AGG | - | chr1.2:54442401-54442420 | None:intergenic | 35.0% | |
| TCTTTGAGCCACATGTAAAT+AGG | - | chr1.2:54443649-54443668 | None:intergenic | 35.0% | |
| TGCAAAACCCAAAATGGAAA+TGG | + | chr1.2:54440834-54440853 | MS.gene50561:CDS | 35.0% | |
| TGCAAATACACCTCTTTCAA+AGG | - | chr1.2:54441828-54441847 | None:intergenic | 35.0% | |
| TTAAGGATGTCCAGCTAAAA+AGG | + | chr1.2:54442132-54442151 | MS.gene50561:CDS | 35.0% | |
| TTCACAGGTTCAGATTTCAA+TGG | + | chr1.2:54440864-54440883 | MS.gene50561:CDS | 35.0% | |
| ! | AACCAAACCCATTTCCATTT+TGG | - | chr1.2:54440845-54440864 | None:intergenic | 35.0% |
| ! | AAGAAGAAGAGTATATCGAG+TGG | + | chr1.2:54442093-54442112 | MS.gene50561:CDS | 35.0% |
| ! | ACCAAACCCATTTCCATTTT+GGG | - | chr1.2:54440844-54440863 | None:intergenic | 35.0% |
| ! | GTTCTTCTTGATGACTGTTA+GGG | + | chr1.2:54441468-54441487 | MS.gene50561:intron | 35.0% |
| ! | TGTTCTTCTTGATGACTGTT+AGG | + | chr1.2:54441467-54441486 | MS.gene50561:intron | 35.0% |
| ! | TGTTTCTCAGCATTGAATAC+TGG | + | chr1.2:54441937-54441956 | MS.gene50561:intron | 35.0% |
| !! | TAAAAAGGATTGGCCCAAAA+TGG | + | chr1.2:54442147-54442166 | MS.gene50561:CDS | 35.0% |
| !! | TTTATTTTCAATTGCGGGCA+TGG | + | chr1.2:54443180-54443199 | MS.gene50561:intron | 35.0% |
| !!! | CCCTGTACATGTTTTTTTGT+TGG | + | chr1.2:54442707-54442726 | MS.gene50561:intron | 35.0% |
| !!! | GCATACAGGGTTTTGAAATT+TGG | + | chr1.2:54441987-54442006 | MS.gene50561:CDS | 35.0% |
| !!! | TACAGGGTTTTGAAATTTGG+GGG | + | chr1.2:54441990-54442009 | MS.gene50561:CDS | 35.0% |
| AAACGCGACAACCAAAATGT+CGG | - | chr1.2:54442044-54442063 | None:intergenic | 40.0% | |
| AAAGCGCAGTAAGAAGACAA+AGG | - | chr1.2:54443587-54443606 | None:intergenic | 40.0% | |
| AACCAGCTGAACTTACTGAT+AGG | + | chr1.2:54441123-54441142 | MS.gene50561:CDS | 40.0% | |
| AACCCATAATCAAGCCATGA+CGG | - | chr1.2:54442187-54442206 | None:intergenic | 40.0% | |
| AAGCGCAGTAAGAAGACAAA+GGG | - | chr1.2:54443586-54443605 | None:intergenic | 40.0% | |
| AATGACCGGGGTTTATAACA+TGG | - | chr1.2:54441073-54441092 | None:intergenic | 40.0% | |
| AGGTACTCCGGATAAAAAAG+GGG | - | chr1.2:54442582-54442601 | None:intergenic | 40.0% | |
| ATAAACCTGGGTTGTGAACT+TGG | - | chr1.2:54440996-54441015 | None:intergenic | 40.0% | |
| ATAGGTTCTCAAATGTGCTC+AGG | - | chr1.2:54442602-54442621 | None:intergenic | 40.0% | |
| ATATCTTCAGTCCAATGACC+GGG | - | chr1.2:54441086-54441105 | None:intergenic | 40.0% | |
| ATCAATGTAGATATGGGTCC+AGG | + | chr1.2:54443144-54443163 | MS.gene50561:intron | 40.0% | |
| ATGTTATAAACCCCGGTCAT+TGG | + | chr1.2:54441072-54441091 | MS.gene50561:CDS | 40.0% | |
| CAGCTACAAGATTGCAACAA+AGG | - | chr1.2:54441770-54441789 | None:intergenic | 40.0% | |
| CAGGTACTCCGGATAAAAAA+GGG | - | chr1.2:54442583-54442602 | None:intergenic | 40.0% | |
| CATATCTTCAGTCCAATGAC+CGG | - | chr1.2:54441087-54441106 | None:intergenic | 40.0% | |
| GATGTCCAGCTAAAAAGGAT+TGG | + | chr1.2:54442137-54442156 | MS.gene50561:CDS | 40.0% | |
| GTATATCGAGTGGTTTACGA+AGG | + | chr1.2:54442103-54442122 | MS.gene50561:CDS | 40.0% | |
| GTCATAACATGGTAGGTATC+AGG | - | chr1.2:54442394-54442413 | None:intergenic | 40.0% | |
| TCAGGTACTCCGGATAAAAA+AGG | - | chr1.2:54442584-54442603 | None:intergenic | 40.0% | |
| TGAAAAAACAGACACACACC+AGG | - | chr1.2:54442364-54442383 | None:intergenic | 40.0% | |
| TTCCTATCAGTAAGTTCAGC+TGG | - | chr1.2:54441128-54441147 | None:intergenic | 40.0% | |
| TTGGAGGAAAACTAGTTCCT+GGG | + | chr1.2:54442977-54442996 | MS.gene50561:intron | 40.0% | |
| TTTGCTTTAGCAAGCTGATG+AGG | - | chr1.2:54441248-54441267 | None:intergenic | 40.0% | |
| ! | AAAGTGGCTTCCTTTGAAAG+AGG | + | chr1.2:54441815-54441834 | MS.gene50561:intron | 40.0% |
| ! | ACCCAAAATGGAAATGGGTT+TGG | + | chr1.2:54440840-54440859 | MS.gene50561:CDS | 40.0% |
| ! | ATTATGGGTTGTTCTGTGAC+TGG | + | chr1.2:54442197-54442216 | MS.gene50561:CDS | 40.0% |
| ! | GAACTCCACGATACCATTTT+GGG | - | chr1.2:54442163-54442182 | None:intergenic | 40.0% |
| ! | GCTTGCTAAAGCAAAGCAAA+AGG | + | chr1.2:54441253-54441272 | MS.gene50561:CDS | 40.0% |
| ! | GTGCCTACTTGCAACATTTT+AGG | + | chr1.2:54442531-54442550 | MS.gene50561:intron | 40.0% |
| ! | TAAAGGCGTATGAAACAGCA+TGG | - | chr1.2:54441397-54441416 | None:intergenic | 40.0% |
| ! | TCTTGGAAGTGTAAGTAGCA+TGG | + | chr1.2:54443254-54443273 | MS.gene50561:intron | 40.0% |
| !! | ATGCTTGTTGTTGATGTTGG+TGG | + | chr1.2:54441149-54441168 | MS.gene50561:CDS | 40.0% |
| !! | GGTACTGGTTTCACTACATT+GGG | + | chr1.2:54441173-54441192 | MS.gene50561:CDS | 40.0% |
| !! | TGGTACTGGTTTCACTACAT+TGG | + | chr1.2:54441172-54441191 | MS.gene50561:CDS | 40.0% |
| !!! | GGTGTGTGTCTGTTTTTTCA+AGG | + | chr1.2:54442364-54442383 | MS.gene50561:intron | 40.0% |
| AACCAAAATGTCGGGTAGAC+AGG | - | chr1.2:54442035-54442054 | None:intergenic | 45.0% | |
| AACGCGACAACCAAAATGTC+GGG | - | chr1.2:54442043-54442062 | None:intergenic | 45.0% | |
| ATACAAACCACGAAGCTGCT+AGG | - | chr1.2:54443621-54443640 | None:intergenic | 45.0% | |
| ATAGATATGTGTCCGCTGGA+AGG | + | chr1.2:54441345-54441364 | MS.gene50561:CDS | 45.0% | |
| ATTGGCCCAAAATGGTATCG+TGG | + | chr1.2:54442155-54442174 | MS.gene50561:CDS | 45.0% | |
| CCTGGGCATGGTAAAGAAAA+TGG | + | chr1.2:54442994-54443013 | MS.gene50561:intron | 45.0% | |
| CTGTTAGGGCCTATTTGGAT+TGG | + | chr1.2:54441482-54441501 | MS.gene50561:intron | 45.0% | |
| GACATCGATATACCTTCCAG+CGG | - | chr1.2:54441360-54441379 | None:intergenic | 45.0% | |
| GATGACTGTTAGGGCCTATT+TGG | + | chr1.2:54441477-54441496 | MS.gene50561:intron | 45.0% | |
| GCCTGACCAGTTAACATTGA+AGG | - | chr1.2:54443312-54443331 | None:intergenic | 45.0% | |
| GCCTTCAATGTTAACTGGTC+AGG | + | chr1.2:54443308-54443327 | MS.gene50561:intron | 45.0% | |
| GGGGGCAAAGCATGTTTAAT+TGG | + | chr1.2:54442008-54442027 | MS.gene50561:CDS | 45.0% | |
| GTTGGAGGAAAACTAGTTCC+TGG | + | chr1.2:54442976-54442995 | MS.gene50561:intron | 45.0% | |
| GTTTACGAAGGCAGGGTTTA+AGG | + | chr1.2:54442115-54442134 | MS.gene50561:CDS | 45.0% | |
| TAAGCTGTTTAGCCAAGCAG+TGG | + | chr1.2:54441712-54441731 | MS.gene50561:intron | 45.0% | |
| TATCTTCAGTCCAATGACCG+GGG | - | chr1.2:54441085-54441104 | None:intergenic | 45.0% | |
| TCAAATGTGCTCAGGTACTC+CGG | - | chr1.2:54442594-54442613 | None:intergenic | 45.0% | |
| TGTTTCTCCTTATGGTGTCC+TGG | + | chr1.2:54442343-54442362 | MS.gene50561:intron | 45.0% | |
| TTCTTACTGCGCTTTGCCTT+GGG | + | chr1.2:54443592-54443611 | MS.gene50561:CDS | 45.0% | |
| ! | ACTGCAGTTTTGCCAATGCA+AGG | - | chr1.2:54443446-54443465 | None:intergenic | 45.0% |
| ! | CCATTTTCTTTACCATGCCC+AGG | - | chr1.2:54442997-54443016 | None:intergenic | 45.0% |
| ! | CGAACTCCACGATACCATTT+TGG | - | chr1.2:54442164-54442183 | None:intergenic | 45.0% |
| ! | GGAAATGGGTTTGGTTTCAC+AGG | + | chr1.2:54440849-54440868 | MS.gene50561:CDS | 45.0% |
| ! | TGGCATCAAGGAAGCATACA+GGG | + | chr1.2:54441974-54441993 | MS.gene50561:CDS | 45.0% |
| !! | CTTGTTGTTGATGTTGGTGG+TGG | + | chr1.2:54441152-54441171 | MS.gene50561:CDS | 45.0% |
| !! | TTCTGCAATTTGCTGCAGCT+TGG | + | chr1.2:54443526-54443545 | MS.gene50561:intron | 45.0% |
| !! | TTGGGCCAATCCTTTTTAGC+TGG | - | chr1.2:54442145-54442164 | None:intergenic | 45.0% |
| AAAGGAGAATCCCCAGATGC+AGG | - | chr1.2:54442230-54442249 | None:intergenic | 50.0% | |
| ACACACACCAGGACACCATA+AGG | - | chr1.2:54442353-54442372 | None:intergenic | 50.0% | |
| ATCGAGTGGTTTACGAAGGC+AGG | + | chr1.2:54442107-54442126 | MS.gene50561:CDS | 50.0% | |
| ATCTGGGGATTCTCCTTTGC+AGG | + | chr1.2:54442232-54442251 | MS.gene50561:CDS | 50.0% | |
| CAAGACCAAGTTCACAACCC+AGG | + | chr1.2:54440988-54441007 | MS.gene50561:CDS | 50.0% | |
| CGCCGTCATGGCTTGATTAT+GGG | + | chr1.2:54442182-54442201 | MS.gene50561:CDS | 50.0% | |
| CGCGTTTCTTCGCAGATGTT+TGG | + | chr1.2:54442057-54442076 | MS.gene50561:CDS | 50.0% | |
| CTTCTTACTGCGCTTTGCCT+TGG | + | chr1.2:54443591-54443610 | MS.gene50561:CDS | 50.0% | |
| GCTGATAGATATGTGTCCGC+TGG | + | chr1.2:54441341-54441360 | MS.gene50561:CDS | 50.0% | |
| GGAAAACTAGTTCCTGGGCA+TGG | + | chr1.2:54442982-54443001 | MS.gene50561:intron | 50.0% | |
| TCGAGTGGTTTACGAAGGCA+GGG | + | chr1.2:54442108-54442127 | MS.gene50561:CDS | 50.0% | |
| TCGCCGTCATGGCTTGATTA+TGG | + | chr1.2:54442181-54442200 | MS.gene50561:CDS | 50.0% | |
| TTTGCTGCAGCTTGGTCCAA+AGG | + | chr1.2:54443534-54443553 | MS.gene50561:intron | 50.0% | |
| ! | ACTGGTGTTAAGCCTGCATC+TGG | + | chr1.2:54442215-54442234 | MS.gene50561:CDS | 50.0% |
| ! | CTGGTGTTAAGCCTGCATCT+GGG | + | chr1.2:54442216-54442235 | MS.gene50561:CDS | 50.0% |
| ! | GTCCTGTCTACCCGACATTT+TGG | + | chr1.2:54442030-54442049 | MS.gene50561:CDS | 50.0% |
| ! | GTGGCATCAAGGAAGCATAC+AGG | + | chr1.2:54441973-54441992 | MS.gene50561:CDS | 50.0% |
| ! | TGGTGTTAAGCCTGCATCTG+GGG | + | chr1.2:54442217-54442236 | MS.gene50561:CDS | 50.0% |
| !! | GTTGATGTTGGTGGTGGTAC+TGG | + | chr1.2:54441158-54441177 | MS.gene50561:CDS | 50.0% |
| AGATCCACAGCGTGGCATCA+AGG | + | chr1.2:54441962-54441981 | MS.gene50561:CDS | 55.0% | |
| TATCGTGGAGTTCGCCGTCA+TGG | + | chr1.2:54442170-54442189 | MS.gene50561:CDS | 55.0% | |
| TTGATGCCACGCTGTGGATC+TGG | - | chr1.2:54441963-54441982 | None:intergenic | 55.0% | |
| GCTTCCTTGATGCCACGCTG+TGG | - | chr1.2:54441969-54441988 | None:intergenic | 60.0% | |
| TACTGGCCAGATCCACAGCG+TGG | + | chr1.2:54441954-54441973 | MS.gene50561:CDS | 60.0% | |
| CGAAGCTGCTAGGACGCCCA+AGG | - | chr1.2:54443611-54443630 | None:intergenic | 65.0% | |
| TGGGCGTCCTAGCAGCTTCG+TGG | + | chr1.2:54443611-54443630 | MS.gene50561:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 54440798 | 54443699 | 54440798 | ID=MS.gene50561 |
| chr1.2 | mRNA | 54440798 | 54443699 | 54440798 | ID=MS.gene50561.t1;Parent=MS.gene50561 |
| chr1.2 | exon | 54440798 | 54441366 | 54440798 | ID=MS.gene50561.t1.exon1;Parent=MS.gene50561.t1 |
| chr1.2 | CDS | 54440798 | 54441366 | 54440798 | ID=cds.MS.gene50561.t1;Parent=MS.gene50561.t1 |
| chr1.2 | exon | 54441947 | 54442253 | 54441947 | ID=MS.gene50561.t1.exon2;Parent=MS.gene50561.t1 |
| chr1.2 | CDS | 54441947 | 54442253 | 54441947 | ID=cds.MS.gene50561.t1;Parent=MS.gene50561.t1 |
| chr1.2 | exon | 54443544 | 54443699 | 54443544 | ID=MS.gene50561.t1.exon3;Parent=MS.gene50561.t1 |
| chr1.2 | CDS | 54443544 | 54443699 | 54443544 | ID=cds.MS.gene50561.t1;Parent=MS.gene50561.t1 |
| Gene Sequence |
| Protein sequence |
