Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061618.t1 | GAU25302.1 | 90.1 | 151 | 15 | 0 | 4 | 154 | 1 | 151 | 1.80E-74 | 288.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061618.t1 | Q6NM73 | 56.2 | 153 | 52 | 2 | 17 | 154 | 155 | 307 | 3.9e-41 | 169.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061618.t1 | A0A2Z6MJ25 | 90.1 | 151 | 15 | 0 | 4 | 154 | 1 | 151 | 1.3e-74 | 288.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene061618 | 0.84239 | 2.66E-58 | -1.69E-46 |
| MS.gene049382 | MS.gene061618 | 0.806093 | 9.72E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene061618 | 0.810909 | 9.12E-51 | -1.69E-46 |
| MS.gene049979 | MS.gene061618 | 0.818084 | 2.36E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene061618 | 0.822459 | 2.34E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene061618 | 0.810538 | 1.10E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene061618 | 0.802737 | 4.87E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene061618 | 0.828967 | 6.70E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene061618 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene061618 | 0.877174 | 7.76E-69 | -1.69E-46 |
| MS.gene050808 | MS.gene061618 | 0.841502 | 4.57E-58 | -1.69E-46 |
| MS.gene050815 | MS.gene061618 | 0.843892 | 1.06E-58 | -1.69E-46 |
| MS.gene050959 | MS.gene061618 | 0.814639 | 1.39E-51 | -1.69E-46 |
| MS.gene051063 | MS.gene061618 | 0.80333 | 3.67E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene061618 | 0.803724 | 3.04E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene061618 | 0.80564 | 1.21E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene061618 | 0.817187 | 3.75E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene061618 | 0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene052133 | MS.gene061618 | 0.832333 | 1.00E-55 | -1.69E-46 |
| MS.gene052256 | MS.gene061618 | 0.801058 | 1.08E-48 | -1.69E-46 |
| MS.gene052302 | MS.gene061618 | 0.836866 | 7.28E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene061618 | 0.836093 | 1.14E-56 | -1.69E-46 |
| MS.gene052613 | MS.gene061618 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene061618 | 0.854416 | 1.25E-61 | -1.69E-46 |
| MS.gene052856 | MS.gene061618 | 0.823961 | 1.04E-53 | -1.69E-46 |
| MS.gene052858 | MS.gene061618 | 0.819087 | 1.40E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene061618 | 0.81873 | 1.68E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene061618 | 0.817233 | 3.67E-52 | -1.69E-46 |
| MS.gene053132 | MS.gene061618 | 0.825138 | 5.52E-54 | -1.69E-46 |
| MS.gene053221 | MS.gene061618 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene053437 | MS.gene061618 | 0.89313 | 8.37E-75 | -1.69E-46 |
| MS.gene053581 | MS.gene061618 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene053630 | MS.gene061618 | 0.813186 | 2.91E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene061618 | 0.806426 | 8.27E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene061618 | 0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene061618 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene061618 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene061618 | 0.835077 | 2.07E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene061618 | 0.841744 | 3.95E-58 | -1.69E-46 |
| MS.gene055608 | MS.gene061618 | 0.823406 | 1.41E-53 | -1.69E-46 |
| MS.gene055816 | MS.gene061618 | -0.825428 | 4.71E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene061618 | -0.806011 | 1.01E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene061618 | -0.847798 | 9.21E-60 | -1.69E-46 |
| MS.gene056432 | MS.gene061618 | 0.831063 | 2.06E-55 | -1.69E-46 |
| MS.gene056584 | MS.gene061618 | 0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene061618 | 0.823595 | 1.27E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene061618 | 0.846402 | 2.22E-59 | -1.69E-46 |
| MS.gene057060 | MS.gene061618 | 0.80885 | 2.53E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene061618 | 0.801064 | 1.07E-48 | -1.69E-46 |
| MS.gene057260 | MS.gene061618 | 0.81116 | 8.04E-51 | -1.69E-46 |
| MS.gene058055 | MS.gene061618 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene058084 | MS.gene061618 | 0.81579 | 7.72E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene061618 | 0.816651 | 4.96E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene061618 | 0.832179 | 1.10E-55 | -1.69E-46 |
| MS.gene058798 | MS.gene061618 | 0.811388 | 7.18E-51 | -1.69E-46 |
| MS.gene058851 | MS.gene061618 | 0.836948 | 6.94E-57 | -1.69E-46 |
| MS.gene058852 | MS.gene061618 | 0.821254 | 4.45E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene061618 | 0.848392 | 6.31E-60 | -1.69E-46 |
| MS.gene058982 | MS.gene061618 | 0.818621 | 1.78E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene061618 | 0.806074 | 9.81E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene061618 | 0.834151 | 3.54E-56 | -1.69E-46 |
| MS.gene06001 | MS.gene061618 | 0.834857 | 2.35E-56 | -1.69E-46 |
| MS.gene060165 | MS.gene061618 | 0.826672 | 2.39E-54 | -1.69E-46 |
| MS.gene060404 | MS.gene061618 | 0.808402 | 3.15E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene061618 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene061618 | 0.829079 | 6.29E-55 | -1.69E-46 |
| MS.gene060619 | MS.gene061618 | 0.84448 | 7.36E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061618.t1 | MTR_1g044580 | 98.667 | 150 | 2 | 0 | 3 | 152 | 141 | 290 | 2.26e-102 | 308 |
| MS.gene061618.t1 | MTR_1g073320 | 70.000 | 160 | 38 | 1 | 3 | 152 | 139 | 298 | 4.63e-71 | 217 |
| MS.gene061618.t1 | MTR_7g098410 | 47.651 | 149 | 76 | 2 | 5 | 152 | 135 | 282 | 1.39e-41 | 140 |
| MS.gene061618.t1 | MTR_1g080350 | 37.333 | 150 | 92 | 2 | 6 | 154 | 147 | 295 | 1.39e-27 | 104 |
| MS.gene061618.t1 | MTR_1g044560 | 43.689 | 103 | 58 | 0 | 4 | 106 | 24 | 126 | 2.62e-22 | 86.3 |
| MS.gene061618.t1 | MTR_8g104990 | 37.241 | 145 | 87 | 3 | 9 | 151 | 138 | 280 | 1.28e-19 | 83.2 |
| MS.gene061618.t1 | MTR_3g065370 | 38.384 | 99 | 56 | 2 | 53 | 149 | 177 | 272 | 5.27e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061618.t1 | AT1G04520 | 64.072 | 167 | 45 | 3 | 3 | 154 | 141 | 307 | 3.45e-66 | 204 |
| MS.gene061618.t1 | AT2G33330 | 62.346 | 162 | 51 | 2 | 3 | 154 | 143 | 304 | 1.29e-63 | 197 |
| MS.gene061618.t1 | AT3G04370 | 41.611 | 149 | 84 | 2 | 6 | 153 | 172 | 318 | 1.56e-34 | 123 |
| MS.gene061618.t1 | AT3G04370 | 41.611 | 149 | 84 | 2 | 6 | 153 | 171 | 317 | 1.89e-34 | 122 |
| MS.gene061618.t1 | AT5G43980 | 39.752 | 161 | 87 | 3 | 3 | 154 | 141 | 300 | 2.84e-33 | 119 |
| MS.gene061618.t1 | AT3G60720 | 33.557 | 149 | 84 | 5 | 6 | 150 | 143 | 280 | 3.73e-16 | 73.9 |
| MS.gene061618.t1 | AT3G60720 | 33.793 | 145 | 81 | 5 | 6 | 146 | 143 | 276 | 1.51e-15 | 72.0 |
| MS.gene061618.t1 | AT2G01660 | 38.298 | 94 | 53 | 2 | 53 | 143 | 185 | 276 | 5.01e-12 | 62.4 |
| MS.gene061618.t1 | AT2G01660 | 38.298 | 94 | 53 | 2 | 53 | 143 | 185 | 276 | 5.29e-12 | 62.4 |
Find 28 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTATCAGCGATGGAAAA+TGG | 0.195405 | 1.2:-27582038 | MS.gene061618:CDS |
| GAATGTGGCAACTCTATTTC+TGG | 0.253750 | 1.2:-27581885 | MS.gene061618:CDS |
| CATAAGTGTTTCATTAGTTA+TGG | 0.313486 | 1.2:-27581849 | MS.gene061618:CDS |
| TATCTTCCACAGATTATTGA+TGG | 0.332558 | 1.2:-27581048 | None:intergenic |
| GCACAATGTGAAGGTGATAT+TGG | 0.371110 | 1.2:-27581960 | MS.gene061618:CDS |
| CTTTATCAGCGATGGAAAAT+GGG | 0.376842 | 1.2:-27582037 | MS.gene061618:CDS |
| AATGTTGCTGGAAGTGGTTT+TGG | 0.382953 | 1.2:-27582077 | MS.gene061618:CDS |
| TGTCTAGATGGAACTCCATT+AGG | 0.401134 | 1.2:+27581819 | None:intergenic |
| AATGGGGTTGTTAGTGGTCA+TGG | 0.418001 | 1.2:-27582020 | MS.gene061618:CDS |
| AGTTATGGCTATTATCCTAA+TGG | 0.427351 | 1.2:-27581834 | MS.gene061618:CDS |
| GCAATGACAGGGCAAGATCC+AGG | 0.447894 | 1.2:-27581251 | MS.gene061618:intron |
| ATAATACTAGGAGGAATTGC+TGG | 0.462780 | 1.2:-27581215 | MS.gene061618:CDS |
| TGTGGGATAACAAATGTTGC+TGG | 0.470043 | 1.2:-27582089 | MS.gene061618:CDS |
| GAATATGAAGAATGTCTAGA+TGG | 0.470370 | 1.2:+27581807 | None:intergenic |
| ATGGAAAATGGGGTTGTTAG+TGG | 0.485449 | 1.2:-27582026 | MS.gene061618:CDS |
| GTTCTTACCTGAAGAAAATG+AGG | 0.485674 | 1.2:+27581785 | None:intergenic |
| ATAACAAATGTTGCTGGAAG+TGG | 0.510378 | 1.2:-27582083 | MS.gene061618:CDS |
| AAAACAGCTGCTATAATACT+AGG | 0.532912 | 1.2:-27581227 | MS.gene061618:CDS |
| CAGATGCTCTATAAGACTTG+TGG | 0.533238 | 1.2:-27582107 | MS.gene061618:CDS |
| AGATGCTCTATAAGACTTGT+GGG | 0.545982 | 1.2:-27582106 | MS.gene061618:CDS |
| GGACGCTGCTTTATCAGCGA+TGG | 0.565779 | 1.2:-27582045 | MS.gene061618:CDS |
| ACTAGGAGGAATTGCTGGAG+TGG | 0.599765 | 1.2:-27581210 | MS.gene061618:CDS |
| GATATTGGTGACTCTGATTG+TGG | 0.607730 | 1.2:-27581945 | MS.gene061618:CDS |
| CAATGACAGGGCAAGATCCA+GGG | 0.608246 | 1.2:-27581250 | MS.gene061618:intron |
| CAGAGAGCTCAAGTTGAATG+TGG | 0.627327 | 1.2:-27581900 | MS.gene061618:CDS |
| ACAGCTGCTATAATACTAGG+AGG | 0.630493 | 1.2:-27581224 | MS.gene061618:CDS |
| TTTATCAGCGATGGAAAATG+GGG | 0.640047 | 1.2:-27582036 | MS.gene061618:CDS |
| AATTTGACAAAGAAACACAA+TGG | 0.727029 | 1.2:-27581155 | MS.gene061618:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATATCAATTTAGTTCA+TGG | - | chr1.2:27581580-27581599 | MS.gene061618:intron | 15.0% |
| !!! | TTTTTATACAACAAACTATA+TGG | - | chr1.2:27581173-27581192 | MS.gene061618:CDS | 15.0% |
| !! | AAAATAAGTGTCAATTTGTA+TGG | - | chr1.2:27581458-27581477 | MS.gene061618:intron | 20.0% |
| !!! | ATTTTGAAATATTGATGATG+TGG | - | chr1.2:27581798-27581817 | MS.gene061618:CDS | 20.0% |
| !!! | TTATATTTTTGCTATTTGCT+AGG | - | chr1.2:27581992-27582011 | MS.gene061618:CDS | 20.0% |
| ! | AAATAAGTAAGTGGATGTAA+TGG | - | chr1.2:27581632-27581651 | MS.gene061618:intron | 25.0% |
| ! | AATTTGACAAAGAAACACAA+TGG | - | chr1.2:27582015-27582034 | MS.gene061618:CDS | 25.0% |
| ! | CATAAGTGTTTCATTAGTTA+TGG | - | chr1.2:27581321-27581340 | MS.gene061618:intron | 25.0% |
| ! | CTTAACCATTGGAAAATTTA+GGG | + | chr1.2:27581853-27581872 | None:intergenic | 25.0% |
| ! | TAACCAACATTTGTCATAAA+GGG | + | chr1.2:27581516-27581535 | None:intergenic | 25.0% |
| ! | TGATAATAATTTCAAACCGA+GGG | - | chr1.2:27581740-27581759 | MS.gene061618:intron | 25.0% |
| ! | TTAACCAACATTTGTCATAA+AGG | + | chr1.2:27581517-27581536 | None:intergenic | 25.0% |
| !! | AAGATGAATTTGAAACTAAG+TGG | - | chr1.2:27581698-27581717 | MS.gene061618:intron | 25.0% |
| !! | ATGTAATGGTTGATATTTGT+AGG | - | chr1.2:27581646-27581665 | MS.gene061618:intron | 25.0% |
| !! | CTATATGGCATTTTATGTTT+TGG | - | chr1.2:27581188-27581207 | MS.gene061618:CDS | 25.0% |
| !! | TTGATAATAATTTCAAACCG+AGG | - | chr1.2:27581739-27581758 | MS.gene061618:intron | 25.0% |
| !!! | CTTATTTTTGGTGATCAATT+TGG | + | chr1.2:27581619-27581638 | None:intergenic | 25.0% |
| !!! | TACATCCACTTACTTATTTT+TGG | + | chr1.2:27581631-27581650 | None:intergenic | 25.0% |
| AAAACAGCTGCTATAATACT+AGG | - | chr1.2:27581943-27581962 | MS.gene061618:CDS | 30.0% | |
| AGTTATGGCTATTATCCTAA+TGG | - | chr1.2:27581336-27581355 | MS.gene061618:intron | 30.0% | |
| CCTTAACCATTGGAAAATTT+AGG | + | chr1.2:27581854-27581873 | None:intergenic | 30.0% | |
| CTAATGTTAAAACCTACAGA+TGG | - | chr1.2:27581407-27581426 | MS.gene061618:intron | 30.0% | |
| GAATATGAAGAATGTCTAGA+TGG | + | chr1.2:27581366-27581385 | None:intergenic | 30.0% | |
| GATCACCAAAAATAAGTAAG+TGG | - | chr1.2:27581623-27581642 | MS.gene061618:intron | 30.0% | |
| ! | CCTAAATTTTCCAATGGTTA+AGG | - | chr1.2:27581851-27581870 | MS.gene061618:CDS | 30.0% |
| ! | CTTTTCCAAACACCAAATTT+TGG | + | chr1.2:27581435-27581454 | None:intergenic | 30.0% |
| ! | TCATATTCCTCATTTTCTTC+AGG | - | chr1.2:27581378-27581397 | MS.gene061618:intron | 30.0% |
| ! | TTTTCCAATGGTTAAGGAAA+AGG | - | chr1.2:27581857-27581876 | MS.gene061618:CDS | 30.0% |
| !! | ATTGATTTGATGCAATGACA+GGG | - | chr1.2:27581908-27581927 | MS.gene061618:CDS | 30.0% |
| !! | CAAAATTTGGTGTTTGGAAA+AGG | - | chr1.2:27581433-27581452 | MS.gene061618:intron | 30.0% |
| !! | TATTGATTTGATGCAATGAC+AGG | - | chr1.2:27581907-27581926 | MS.gene061618:CDS | 30.0% |
| AACATTTGTCATAAAGGGCA+AGG | + | chr1.2:27581511-27581530 | None:intergenic | 35.0% | |
| AGATGCTCTATAAGACTTGT+GGG | - | chr1.2:27581064-27581083 | MS.gene061618:intron | 35.0% | |
| ATAACAAATGTTGCTGGAAG+TGG | - | chr1.2:27581087-27581106 | MS.gene061618:intron | 35.0% | |
| ATAATACTAGGAGGAATTGC+TGG | - | chr1.2:27581955-27581974 | MS.gene061618:CDS | 35.0% | |
| CTACAGATGGAACCAAAATT+TGG | - | chr1.2:27581420-27581439 | MS.gene061618:intron | 35.0% | |
| CTTTATCAGCGATGGAAAAT+GGG | - | chr1.2:27581133-27581152 | MS.gene061618:intron | 35.0% | |
| GTTCTTACCTGAAGAAAATG+AGG | + | chr1.2:27581388-27581407 | None:intergenic | 35.0% | |
| TTGCCCTTTATGACAAATGT+TGG | - | chr1.2:27581510-27581529 | MS.gene061618:intron | 35.0% | |
| TTTATCAGCGATGGAAAATG+GGG | - | chr1.2:27581134-27581153 | MS.gene061618:intron | 35.0% | |
| ! | AGTACCTTTTCCTTAACCAT+TGG | + | chr1.2:27581864-27581883 | None:intergenic | 35.0% |
| ! | TTTTAATCGAGTTTGTCCCT+CGG | + | chr1.2:27581759-27581778 | None:intergenic | 35.0% |
| !! | TGGAACCAAAATTTGGTGTT+TGG | - | chr1.2:27581427-27581446 | MS.gene061618:intron | 35.0% |
| !!! | CAAATTTTGGTTCCATCTGT+AGG | + | chr1.2:27581422-27581441 | None:intergenic | 35.0% |
| !!! | TATGTTTTGGCACAATGTGA+AGG | - | chr1.2:27581201-27581220 | MS.gene061618:CDS | 35.0% |
| ACAGCTGCTATAATACTAGG+AGG | - | chr1.2:27581946-27581965 | MS.gene061618:CDS | 40.0% | |
| ATGGAAAATGGGGTTGTTAG+TGG | - | chr1.2:27581144-27581163 | MS.gene061618:intron | 40.0% | |
| CAGATGCTCTATAAGACTTG+TGG | - | chr1.2:27581063-27581082 | MS.gene061618:intron | 40.0% | |
| GAATGTGGCAACTCTATTTC+TGG | - | chr1.2:27581285-27581304 | MS.gene061618:intron | 40.0% | |
| GCACAATGTGAAGGTGATAT+TGG | - | chr1.2:27581210-27581229 | MS.gene061618:CDS | 40.0% | |
| GCTTTATCAGCGATGGAAAA+TGG | - | chr1.2:27581132-27581151 | MS.gene061618:intron | 40.0% | |
| TGTCTAGATGGAACTCCATT+AGG | + | chr1.2:27581354-27581373 | None:intergenic | 40.0% | |
| TGTGGGATAACAAATGTTGC+TGG | - | chr1.2:27581081-27581100 | MS.gene061618:intron | 40.0% | |
| ! | AATGTTGCTGGAAGTGGTTT+TGG | - | chr1.2:27581093-27581112 | MS.gene061618:intron | 40.0% |
| ! | CTGCTCCCTAAATTTTCCAA+TGG | - | chr1.2:27581845-27581864 | MS.gene061618:CDS | 40.0% |
| ! | GATATTGGTGACTCTGATTG+TGG | - | chr1.2:27581225-27581244 | MS.gene061618:CDS | 40.0% |
| !! | ATTATAGCAGCTGTTTTCCC+TGG | + | chr1.2:27581940-27581959 | None:intergenic | 40.0% |
| AATGGGGTTGTTAGTGGTCA+TGG | - | chr1.2:27581150-27581169 | MS.gene061618:intron | 45.0% | |
| !! | CAGAGAGCTCAAGTTGAATG+TGG | - | chr1.2:27581270-27581289 | MS.gene061618:intron | 45.0% |
| !!! | AAGTGGTTTTGGCGAGAGAA+GGG | - | chr1.2:27581104-27581123 | MS.gene061618:intron | 45.0% |
| ACTAGGAGGAATTGCTGGAG+TGG | - | chr1.2:27581960-27581979 | MS.gene061618:CDS | 50.0% | |
| CAATGACAGGGCAAGATCCA+GGG | - | chr1.2:27581920-27581939 | MS.gene061618:CDS | 50.0% | |
| !!! | GAAGTGGTTTTGGCGAGAGA+AGG | - | chr1.2:27581103-27581122 | MS.gene061618:intron | 50.0% |
| GCAATGACAGGGCAAGATCC+AGG | - | chr1.2:27581919-27581938 | MS.gene061618:CDS | 55.0% | |
| ! | GGACGCTGCTTTATCAGCGA+TGG | - | chr1.2:27581125-27581144 | MS.gene061618:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 27581051 | 27582141 | 27581051 | ID=MS.gene061618 |
| chr1.2 | mRNA | 27581051 | 27582141 | 27581051 | ID=MS.gene061618.t1;Parent=MS.gene061618 |
| chr1.2 | exon | 27581793 | 27582141 | 27581793 | ID=MS.gene061618.t1.exon1;Parent=MS.gene061618.t1 |
| chr1.2 | CDS | 27581793 | 27582141 | 27581793 | ID=cds.MS.gene061618.t1;Parent=MS.gene061618.t1 |
| chr1.2 | exon | 27581156 | 27581263 | 27581156 | ID=MS.gene061618.t1.exon2;Parent=MS.gene061618.t1 |
| chr1.2 | CDS | 27581156 | 27581263 | 27581156 | ID=cds.MS.gene061618.t1;Parent=MS.gene061618.t1 |
| chr1.2 | exon | 27581051 | 27581058 | 27581051 | ID=MS.gene061618.t1.exon3;Parent=MS.gene061618.t1 |
| chr1.2 | CDS | 27581051 | 27581058 | 27581051 | ID=cds.MS.gene061618.t1;Parent=MS.gene061618.t1 |
| Gene Sequence |
| Protein sequence |
