Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054833.t1 | XP_003624978.2 | 96.1 | 204 | 8 | 0 | 1 | 204 | 191 | 394 | 2.20E-120 | 441.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054833.t1 | Q6NLB1 | 64.6 | 206 | 71 | 1 | 1 | 204 | 166 | 371 | 1.2e-85 | 317.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054833.t1 | Q2HSY4 | 96.1 | 204 | 8 | 0 | 1 | 204 | 191 | 394 | 1.6e-120 | 441.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene054833 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene054833 | 0.827478 | 1.53E-54 | -1.69E-46 |
| MS.gene050438 | MS.gene054833 | 0.80393 | 2.76E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene054833 | 0.809406 | 1.92E-50 | -1.69E-46 |
| MS.gene053565 | MS.gene054833 | 0.801038 | 1.09E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene055358 | 0.802854 | 4.60E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene059128 | 0.826779 | 2.25E-54 | -1.69E-46 |
| MS.gene054833 | MS.gene060480 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene061333 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene061618 | 0.800593 | 1.34E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene061947 | 0.817395 | 3.37E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene062354 | 0.820582 | 6.36E-53 | -1.69E-46 |
| MS.gene054833 | MS.gene064944 | 0.828355 | 9.42E-55 | -1.69E-46 |
| MS.gene054833 | MS.gene068116 | 0.802915 | 4.47E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene068950 | 0.809027 | 2.32E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene071790 | -0.8193 | 1.25E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene072671 | 0.802025 | 6.82E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene22311 | -0.800683 | 1.28E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene22854 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene26073 | 0.80797 | 3.90E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene29095 | 0.801194 | 1.01E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene33527 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene37517 | 0.807456 | 5.01E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene39007 | 0.844397 | 7.76E-59 | -1.69E-46 |
| MS.gene054833 | MS.gene39018 | 0.955724 | 1.57E-113 | -1.69E-46 |
| MS.gene054833 | MS.gene45193 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene48577 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene49304 | 0.816086 | 6.63E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene50621 | 0.815259 | 1.01E-51 | -1.69E-46 |
| MS.gene054833 | MS.gene51441 | 0.802773 | 4.79E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene53586 | 0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene054833 | MS.gene57945 | 0.820864 | 5.47E-53 | -1.69E-46 |
| MS.gene054833 | MS.gene58375 | 0.807472 | 4.97E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene59903 | 0.829313 | 5.52E-55 | -1.69E-46 |
| MS.gene054833 | MS.gene62682 | 0.807004 | 6.25E-50 | -1.69E-46 |
| MS.gene054833 | MS.gene64101 | 0.805583 | 1.24E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene64249 | 0.835776 | 1.38E-56 | -1.69E-46 |
| MS.gene054833 | MS.gene65718 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene72141 | 0.800184 | 1.62E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene72268 | 0.837112 | 6.30E-57 | -1.69E-46 |
| MS.gene054833 | MS.gene72557 | 0.817579 | 3.06E-52 | -1.69E-46 |
| MS.gene054833 | MS.gene74599 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene054833 | MS.gene84396 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene054833 | MS.gene94499 | 0.805836 | 1.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 43 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTGAGGAAAACATAAAA+TGG | 0.213796 | 7.3:+19726095 | MS.gene054833:CDS |
| GGTGACAGATCCAGTGATTT+TGG | 0.292587 | 7.3:+19726703 | MS.gene054833:intron |
| GTATAGTGTCATTGGTCATT+TGG | 0.367045 | 7.3:+19726535 | MS.gene054833:CDS |
| CTTTATCTTTCTCTTGAGAA+TGG | 0.369439 | 7.3:+19725423 | MS.gene054833:CDS |
| CATTGCCAATGTCACAATAA+AGG | 0.376211 | 7.3:+19726581 | MS.gene054833:CDS |
| GAACAAGGAAATGAAATAGA+AGG | 0.401759 | 7.3:+19726791 | MS.gene054833:CDS |
| TTACCTCACGGTTATAAACT+TGG | 0.402760 | 7.3:-19725464 | None:intergenic |
| TGCTTAGATGACTTAAGGCC+TGG | 0.434332 | 7.3:+19726175 | MS.gene054833:CDS |
| AGAAACAAGGAGTTCCCTTA+TGG | 0.448940 | 7.3:+19726223 | MS.gene054833:CDS |
| TTACAAAGTGGAAGAAACTT+TGG | 0.456123 | 7.3:+19726855 | MS.gene054833:CDS |
| CTGACTGCTTAGATGACTTA+AGG | 0.460389 | 7.3:+19726170 | MS.gene054833:CDS |
| GGTTGGTGGTATAGTGTCAT+TGG | 0.469917 | 7.3:+19726527 | MS.gene054833:intron |
| AGAGCAGCAATTGAGTCATC+TGG | 0.473004 | 7.3:-19725402 | None:intergenic |
| TCTTACCTTTATTGTGACAT+TGG | 0.477470 | 7.3:-19726586 | None:intergenic |
| TTGCACATACCTTGCTTGAA+AGG | 0.477849 | 7.3:-19725695 | None:intergenic |
| AACTGAGGAAAACATAAAAT+GGG | 0.478038 | 7.3:+19726096 | MS.gene054833:CDS |
| ACATGTGAAGAAGAGTCAAT+AGG | 0.486449 | 7.3:-19726136 | None:intergenic |
| TCACGGTTATAAACTTGGGC+AGG | 0.488493 | 7.3:-19725459 | None:intergenic |
| TGAATTTCAACATGATCTCC+AGG | 0.504590 | 7.3:-19726193 | None:intergenic |
| CTTTATTGTGACATTGGCAA+TGG | 0.507841 | 7.3:-19726580 | None:intergenic |
| TTGGAAACATGTCAAGGTGA+TGG | 0.516906 | 7.3:+19726554 | MS.gene054833:CDS |
| TGGAAACATGTCAAGGTGAT+GGG | 0.523680 | 7.3:+19726555 | MS.gene054833:CDS |
| TGTGTGAACTCCAAAATCAC+TGG | 0.525464 | 7.3:-19726713 | None:intergenic |
| TCTGACAGGTACTCACCTCA+TGG | 0.532267 | 7.3:+19726064 | MS.gene054833:intron |
| TACCTCACGGTTATAAACTT+GGG | 0.540506 | 7.3:-19725463 | None:intergenic |
| GAGTTCACACAATACACAGC+TGG | 0.557018 | 7.3:+19726725 | MS.gene054833:CDS |
| GGTACTCACCTCATGGGAGA+TGG | 0.562172 | 7.3:+19726071 | MS.gene054833:intron |
| TAGGATGAGACATACCATAA+GGG | 0.562365 | 7.3:-19726237 | None:intergenic |
| AATACACAGCTGGCTCAAGA+TGG | 0.566869 | 7.3:+19726735 | MS.gene054833:CDS |
| GAGATCATGTTGAAATTCAG+TGG | 0.569671 | 7.3:+19726197 | MS.gene054833:CDS |
| GAACAGATGCCTTTCAAGCA+AGG | 0.573120 | 7.3:+19725686 | MS.gene054833:CDS |
| AGGAAAACATAAAATGGGAA+AGG | 0.579315 | 7.3:+19726101 | MS.gene054833:CDS |
| CACGGTTATAAACTTGGGCA+GGG | 0.616974 | 7.3:-19725458 | None:intergenic |
| GGTCATTTGGAAACATGTCA+AGG | 0.617542 | 7.3:+19726548 | MS.gene054833:CDS |
| AATCAGAAAGTTGCATAGCA+AGG | 0.629679 | 7.3:+19726826 | MS.gene054833:CDS |
| CTGACAGGTACTCACCTCAT+GGG | 0.633290 | 7.3:+19726065 | MS.gene054833:intron |
| AATTCAGTGGAGAAGAAACA+AGG | 0.638341 | 7.3:+19726210 | MS.gene054833:CDS |
| TCAGTTGTCCATCTCCCATG+AGG | 0.638779 | 7.3:-19726079 | None:intergenic |
| CAGAAAGTTGCATAGCAAGG+AGG | 0.668496 | 7.3:+19726829 | MS.gene054833:CDS |
| GCAAGGAGGAGATTACAAAG+TGG | 0.681205 | 7.3:+19726843 | MS.gene054833:CDS |
| TGTGAAGAAGAGTCAATAGG+TGG | 0.697492 | 7.3:-19726133 | None:intergenic |
| TGCCCAAGTTTATAACCGTG+AGG | 0.709466 | 7.3:+19725461 | MS.gene054833:CDS |
| TCATGGGAGATGGACAACTG+AGG | 0.731418 | 7.3:+19726081 | MS.gene054833:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATACTAATTTTTAAATCA+GGG | - | chr7.3:19725537-19725556 | None:intergenic | 10.0% |
| !!! | TTAATACTAATTTTTAAATC+AGG | - | chr7.3:19725538-19725557 | None:intergenic | 10.0% |
| !!! | TTTTAAAAATGTTTTGTTAT+AGG | + | chr7.3:19726506-19726525 | MS.gene054833:intron | 10.0% |
| !!! | AATATTTTGTCTTGTAATTA+AGG | + | chr7.3:19725560-19725579 | MS.gene054833:intron | 15.0% |
| !!! | ATATTTTGTCTTGTAATTAA+GGG | + | chr7.3:19725561-19725580 | MS.gene054833:intron | 15.0% |
| !!! | TCAATAGTTTAACATTTTAT+AGG | + | chr7.3:19725994-19726013 | MS.gene054833:intron | 15.0% |
| !!! | TTGATAATAGTTAATATTCT+AGG | - | chr7.3:19726368-19726387 | None:intergenic | 15.0% |
| !! | AAAGTGACAACATAATTTAA+GGG | - | chr7.3:19726651-19726670 | None:intergenic | 20.0% |
| !! | AATAACCTATGAAATACTAA+AGG | + | chr7.3:19725810-19725829 | MS.gene054833:intron | 20.0% |
| !! | ATAATTAAAATGTATGCTAG+TGG | - | chr7.3:19726616-19726635 | None:intergenic | 20.0% |
| !! | GATGATTAAATCAATAATGT+TGG | + | chr7.3:19726682-19726701 | MS.gene054833:intron | 20.0% |
| !! | TAAAGTGACAACATAATTTA+AGG | - | chr7.3:19726652-19726671 | None:intergenic | 20.0% |
| !! | TTATGTCAGTAGATAAATAA+AGG | + | chr7.3:19726328-19726347 | MS.gene054833:intron | 20.0% |
| !!! | AAAAATGTTTTGTTATAGGT+TGG | + | chr7.3:19726510-19726529 | MS.gene054833:intron | 20.0% |
| !!! | AATGAAATAGAAGGTTTTTA+TGG | + | chr7.3:19726800-19726819 | MS.gene054833:CDS | 20.0% |
| !!! | AATTAAACCAAAAGTACAAT+AGG | - | chr7.3:19725780-19725799 | None:intergenic | 20.0% |
| !!! | ATGAAATAGAAGGTTTTTAT+GGG | + | chr7.3:19726801-19726820 | MS.gene054833:CDS | 20.0% |
| !!! | TTTTAAGTACATTTTCAGAA+TGG | + | chr7.3:19725610-19725629 | MS.gene054833:intron | 20.0% |
| ! | AACTGAGGAAAACATAAAAT+GGG | + | chr7.3:19726096-19726115 | MS.gene054833:CDS | 25.0% |
| ! | AAGTGACAACATAATTTAAG+GGG | - | chr7.3:19726650-19726669 | None:intergenic | 25.0% |
| ! | AGAAAAAATCATAGAGAACA+AGG | + | chr7.3:19726776-19726795 | MS.gene054833:CDS | 25.0% |
| ! | CATTCAATATTGTTGAGTTT+AGG | + | chr7.3:19725727-19725746 | MS.gene054833:intron | 25.0% |
| ! | TATCAATGTTTGTGATAGAT+TGG | + | chr7.3:19726382-19726401 | MS.gene054833:intron | 25.0% |
| !! | TGAAATAGAAGGTTTTTATG+GGG | + | chr7.3:19726802-19726821 | MS.gene054833:CDS | 25.0% |
| AGGAAAACATAAAATGGGAA+AGG | + | chr7.3:19726101-19726120 | MS.gene054833:CDS | 30.0% | |
| AGGTAAAAAGACAAGTTGTT+TGG | - | chr7.3:19725755-19725774 | None:intergenic | 30.0% | |
| CAACTGAGGAAAACATAAAA+TGG | + | chr7.3:19726095-19726114 | MS.gene054833:CDS | 30.0% | |
| CTTTATCTTTCTCTTGAGAA+TGG | + | chr7.3:19725423-19725442 | MS.gene054833:CDS | 30.0% | |
| GAACAAGGAAATGAAATAGA+AGG | + | chr7.3:19726791-19726810 | MS.gene054833:CDS | 30.0% | |
| GGTATCCTTTAGTATTTCAT+AGG | - | chr7.3:19725818-19725837 | None:intergenic | 30.0% | |
| GTCAGTAGATAAATAAAGGT+CGG | + | chr7.3:19726332-19726351 | MS.gene054833:intron | 30.0% | |
| TCTTACCTTTATTGTGACAT+TGG | - | chr7.3:19726589-19726608 | None:intergenic | 30.0% | |
| TTACAAAGTGGAAGAAACTT+TGG | + | chr7.3:19726855-19726874 | MS.gene054833:CDS | 30.0% | |
| TTAGATATTGCACAACAACT+AGG | - | chr7.3:19726259-19726278 | None:intergenic | 30.0% | |
| TTTATGCGACTATTTAGAAG+AGG | - | chr7.3:19726305-19726324 | None:intergenic | 30.0% | |
| ! | CTCTTGAGAATGGAAATTTT+TGG | + | chr7.3:19725433-19725452 | MS.gene054833:CDS | 30.0% |
| ! | GAAATAGAAGGTTTTTATGG+GGG | + | chr7.3:19726803-19726822 | MS.gene054833:CDS | 30.0% |
| !! | AATGTTTTGTTATAGGTTGG+TGG | + | chr7.3:19726513-19726532 | MS.gene054833:intron | 30.0% |
| !!! | TCATTCATGTTTTTTCTGAC+AGG | + | chr7.3:19726050-19726069 | MS.gene054833:intron | 30.0% |
| AATCAGAAAGTTGCATAGCA+AGG | + | chr7.3:19726826-19726845 | MS.gene054833:CDS | 35.0% | |
| AATTCAGTGGAGAAGAAACA+AGG | + | chr7.3:19726210-19726229 | MS.gene054833:CDS | 35.0% | |
| ACATGTGAAGAAGAGTCAAT+AGG | - | chr7.3:19726139-19726158 | None:intergenic | 35.0% | |
| ACTTCAGACCAAAATCATTC+TGG | - | chr7.3:19725945-19725964 | None:intergenic | 35.0% | |
| CATTGCCAATGTCACAATAA+AGG | + | chr7.3:19726581-19726600 | MS.gene054833:CDS | 35.0% | |
| CTTTATTGTGACATTGGCAA+TGG | - | chr7.3:19726583-19726602 | None:intergenic | 35.0% | |
| GAGATCATGTTGAAATTCAG+TGG | + | chr7.3:19726197-19726216 | MS.gene054833:CDS | 35.0% | |
| TACCTCACGGTTATAAACTT+GGG | - | chr7.3:19725466-19725485 | None:intergenic | 35.0% | |
| TAGGATGAGACATACCATAA+GGG | - | chr7.3:19726240-19726259 | None:intergenic | 35.0% | |
| TATAACCGTGAGGTAAATAC+TGG | + | chr7.3:19725471-19725490 | MS.gene054833:intron | 35.0% | |
| TGAATTTCAACATGATCTCC+AGG | - | chr7.3:19726196-19726215 | None:intergenic | 35.0% | |
| TTACCTCACGGTTATAAACT+TGG | - | chr7.3:19725467-19725486 | None:intergenic | 35.0% | |
| ! | AACCAAAAGTACAATAGGAC+AGG | - | chr7.3:19725775-19725794 | None:intergenic | 35.0% |
| ! | GTATAGTGTCATTGGTCATT+TGG | + | chr7.3:19726535-19726554 | MS.gene054833:CDS | 35.0% |
| ! | TACCTGTCCTATTGTACTTT+TGG | + | chr7.3:19725770-19725789 | MS.gene054833:intron | 35.0% |
| ! | TAGTGTCTACGTGTTAGTTT+CGG | - | chr7.3:19725851-19725870 | None:intergenic | 35.0% |
| AGAAACAAGGAGTTCCCTTA+TGG | + | chr7.3:19726223-19726242 | MS.gene054833:CDS | 40.0% | |
| CTAGGATGAGACATACCATA+AGG | - | chr7.3:19726241-19726260 | None:intergenic | 40.0% | |
| CTGACTGCTTAGATGACTTA+AGG | + | chr7.3:19726170-19726189 | MS.gene054833:CDS | 40.0% | |
| GGTCATTTGGAAACATGTCA+AGG | + | chr7.3:19726548-19726567 | MS.gene054833:CDS | 40.0% | |
| TGCAACCAGTATTTACCTCA+CGG | - | chr7.3:19725479-19725498 | None:intergenic | 40.0% | |
| TGGAAACATGTCAAGGTGAT+GGG | + | chr7.3:19726555-19726574 | MS.gene054833:CDS | 40.0% | |
| TGTGAAGAAGAGTCAATAGG+TGG | - | chr7.3:19726136-19726155 | None:intergenic | 40.0% | |
| TGTGTGAACTCCAAAATCAC+TGG | - | chr7.3:19726716-19726735 | None:intergenic | 40.0% | |
| TTGCACATACCTTGCTTGAA+AGG | - | chr7.3:19725698-19725717 | None:intergenic | 40.0% | |
| TTGGAAACATGTCAAGGTGA+TGG | + | chr7.3:19726554-19726573 | MS.gene054833:CDS | 40.0% | |
| ! | CATTTTCAGAATGGTCATGC+TGG | + | chr7.3:19725619-19725638 | MS.gene054833:intron | 40.0% |
| ! | GTCAGACACCAGAATGATTT+TGG | + | chr7.3:19725934-19725953 | MS.gene054833:intron | 40.0% |
| !! | TACTGGTTGCATGCAGATTT+TGG | + | chr7.3:19725488-19725507 | MS.gene054833:intron | 40.0% |
| AGAGCAGCAATTGAGTCATC+TGG | - | chr7.3:19725405-19725424 | None:intergenic | 45.0% | |
| ATCATTCTGGTGTCTGACAC+TGG | - | chr7.3:19725932-19725951 | None:intergenic | 45.0% | |
| CACGGTTATAAACTTGGGCA+GGG | - | chr7.3:19725461-19725480 | None:intergenic | 45.0% | |
| CAGAAAGTTGCATAGCAAGG+AGG | + | chr7.3:19726829-19726848 | MS.gene054833:CDS | 45.0% | |
| GAACAGATGCCTTTCAAGCA+AGG | + | chr7.3:19725686-19725705 | MS.gene054833:CDS | 45.0% | |
| GAGTTCACACAATACACAGC+TGG | + | chr7.3:19726725-19726744 | MS.gene054833:CDS | 45.0% | |
| GCAAGGAGGAGATTACAAAG+TGG | + | chr7.3:19726843-19726862 | MS.gene054833:CDS | 45.0% | |
| GCACATGACACTAACACATG+TGG | - | chr7.3:19725910-19725929 | None:intergenic | 45.0% | |
| TCACGGTTATAAACTTGGGC+AGG | - | chr7.3:19725462-19725481 | None:intergenic | 45.0% | |
| TGCCCAAGTTTATAACCGTG+AGG | + | chr7.3:19725461-19725480 | MS.gene054833:CDS | 45.0% | |
| TGCTTAGATGACTTAAGGCC+TGG | + | chr7.3:19726175-19726194 | MS.gene054833:CDS | 45.0% | |
| ! | AATACACAGCTGGCTCAAGA+TGG | + | chr7.3:19726735-19726754 | MS.gene054833:CDS | 45.0% |
| ! | GGTGACAGATCCAGTGATTT+TGG | + | chr7.3:19726703-19726722 | MS.gene054833:intron | 45.0% |
| !! | GGTTGGTGGTATAGTGTCAT+TGG | + | chr7.3:19726527-19726546 | MS.gene054833:intron | 45.0% |
| CTGACAGGTACTCACCTCAT+GGG | + | chr7.3:19726065-19726084 | MS.gene054833:intron | 50.0% | |
| TCAGTTGTCCATCTCCCATG+AGG | - | chr7.3:19726082-19726101 | None:intergenic | 50.0% | |
| TCATGGGAGATGGACAACTG+AGG | + | chr7.3:19726081-19726100 | MS.gene054833:CDS | 50.0% | |
| TCTGACAGGTACTCACCTCA+TGG | + | chr7.3:19726064-19726083 | MS.gene054833:intron | 50.0% | |
| !! | GTTAGTTTCGGTGTCGTGTC+TGG | - | chr7.3:19725839-19725858 | None:intergenic | 50.0% |
| GGTACTCACCTCATGGGAGA+TGG | + | chr7.3:19726071-19726090 | MS.gene054833:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 19725382 | 19726898 | 19725382 | ID=MS.gene054833 |
| chr7.3 | mRNA | 19725382 | 19726898 | 19725382 | ID=MS.gene054833.t1;Parent=MS.gene054833 |
| chr7.3 | exon | 19725382 | 19725482 | 19725382 | ID=MS.gene054833.t1.exon1;Parent=MS.gene054833.t1 |
| chr7.3 | CDS | 19725382 | 19725482 | 19725382 | ID=cds.MS.gene054833.t1;Parent=MS.gene054833.t1 |
| chr7.3 | exon | 19725628 | 19725707 | 19725628 | ID=MS.gene054833.t1.exon2;Parent=MS.gene054833.t1 |
| chr7.3 | CDS | 19725628 | 19725707 | 19725628 | ID=cds.MS.gene054833.t1;Parent=MS.gene054833.t1 |
| chr7.3 | exon | 19726072 | 19726244 | 19726072 | ID=MS.gene054833.t1.exon3;Parent=MS.gene054833.t1 |
| chr7.3 | CDS | 19726072 | 19726244 | 19726072 | ID=cds.MS.gene054833.t1;Parent=MS.gene054833.t1 |
| chr7.3 | exon | 19726528 | 19726602 | 19726528 | ID=MS.gene054833.t1.exon4;Parent=MS.gene054833.t1 |
| chr7.3 | CDS | 19726528 | 19726602 | 19726528 | ID=cds.MS.gene054833.t1;Parent=MS.gene054833.t1 |
| chr7.3 | exon | 19726711 | 19726898 | 19726711 | ID=MS.gene054833.t1.exon5;Parent=MS.gene054833.t1 |
| chr7.3 | CDS | 19726711 | 19726898 | 19726711 | ID=cds.MS.gene054833.t1;Parent=MS.gene054833.t1 |
| Gene Sequence |
| Protein sequence |
