Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067951.t1 | XP_013446172.1 | 100 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 1.70E-29 | 137.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067951.t1 | Q93XX8 | 81.2 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 4.0e-24 | 111.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067951.t1 | A0A072TRQ0 | 100.0 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 1.2e-29 | 137.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050916 | MS.gene067951 | 0.818683 | 1.72E-52 | -1.69E-46 |
| MS.gene056443 | MS.gene067951 | 0.814639 | 1.39E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene067951 | 0.805029 | 1.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68979 | MS.gene067951 | PPI |
| MS.gene038800 | MS.gene067951 | PPI |
| MS.gene046040 | MS.gene067951 | PPI |
| MS.gene064180 | MS.gene067951 | PPI |
| MS.gene45344 | MS.gene067951 | PPI |
| MS.gene056257 | MS.gene067951 | PPI |
| MS.gene054186 | MS.gene067951 | PPI |
| MS.gene001986 | MS.gene067951 | PPI |
| MS.gene41916 | MS.gene067951 | PPI |
| MS.gene95758 | MS.gene067951 | PPI |
| MS.gene31515 | MS.gene067951 | PPI |
| MS.gene059422 | MS.gene067951 | PPI |
| MS.gene08205 | MS.gene067951 | PPI |
| MS.gene037324 | MS.gene067951 | PPI |
| MS.gene51868 | MS.gene067951 | PPI |
| MS.gene90957 | MS.gene067951 | PPI |
| MS.gene057730 | MS.gene067951 | PPI |
| MS.gene000714 | MS.gene067951 | PPI |
| MS.gene90954 | MS.gene067951 | PPI |
| MS.gene033017 | MS.gene067951 | PPI |
| MS.gene044498 | MS.gene067951 | PPI |
| MS.gene067809 | MS.gene067951 | PPI |
| MS.gene52097 | MS.gene067951 | PPI |
| MS.gene72894 | MS.gene067951 | PPI |
| MS.gene003501 | MS.gene067951 | PPI |
| MS.gene99744 | MS.gene067951 | PPI |
| MS.gene029242 | MS.gene067951 | PPI |
| MS.gene028023 | MS.gene067951 | PPI |
| MS.gene98436 | MS.gene067951 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067951.t1 | MTR_8g069770 | 100.000 | 64 | 0 | 0 | 1 | 64 | 1 | 64 | 4.79e-44 | 135 |
| MS.gene067951.t1 | MTR_7g097110 | 85.938 | 64 | 9 | 0 | 1 | 64 | 1 | 64 | 7.70e-36 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067951.t1 | AT2G20490 | 81.250 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 1.85e-34 | 111 |
| MS.gene067951.t1 | AT2G20490 | 81.250 | 64 | 12 | 0 | 1 | 64 | 1 | 64 | 1.85e-34 | 111 |
| MS.gene067951.t1 | AT2G20490 | 79.688 | 64 | 12 | 1 | 1 | 64 | 1 | 63 | 5.32e-32 | 105 |
Find 16 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTGTTACATAAATGATAA+TGG | 0.389907 | 8.3:-33109311 | MS.gene067951:CDS |
| GAAGGAATCACCACTGGGTT+CGG | 0.421070 | 8.3:-33108118 | MS.gene067951:CDS |
| GTGCGTCTGAAGAAGCGCTT+TGG | 0.482078 | 8.3:-33107103 | MS.gene067951:CDS |
| TTCCGAGGTGGCTGCTGAGT+TGG | 0.491045 | 8.3:+33107073 | None:intergenic |
| ATGATAAATTCTCAGACCAT+AGG | 0.495274 | 8.3:-33107126 | MS.gene067951:CDS |
| GCTTCTTCAGACGCACCCTA+TGG | 0.540494 | 8.3:+33107110 | None:intergenic |
| TGGTCTGAGAATTTATCATC+GGG | 0.555795 | 8.3:+33107130 | None:intergenic |
| TGATAAATTCTCAGACCATA+GGG | 0.566431 | 8.3:-33107125 | MS.gene067951:CDS |
| ATGGTCTGAGAATTTATCAT+CGG | 0.567138 | 8.3:+33107129 | None:intergenic |
| TGCCAACTCAGCAGCCACCT+CGG | 0.572303 | 8.3:-33107075 | MS.gene067951:CDS |
| TTTCAGAAGGAATCACCACT+GGG | 0.620010 | 8.3:-33108123 | MS.gene067951:intron |
| GACTCTGTTGCCGAACCCAG+TGG | 0.655330 | 8.3:+33108108 | None:intergenic |
| CTATCTCAGTACTTCCGAGG+TGG | 0.658485 | 8.3:+33107061 | None:intergenic |
| GCAACAGAGTCAGCTCACCC+AGG | 0.664796 | 8.3:-33108096 | MS.gene067951:intron |
| TCACTATCTCAGTACTTCCG+AGG | 0.676583 | 8.3:+33107058 | None:intergenic |
| TGACAAAGTTTACACTACCA+AGG | 0.686778 | 8.3:-33109288 | MS.gene067951:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATCTTATAGTTTATA+CGG | - | chr8.3:33107370-33107389 | MS.gene067951:intron | 15.0% |
| !! | ATATATTTCACTACAAAAAA+GGG | + | chr8.3:33107918-33107937 | None:intergenic | 15.0% |
| !! | TATATATTTCACTACAAAAA+AGG | + | chr8.3:33107919-33107938 | None:intergenic | 15.0% |
| !!! | ATTATGTAAATGGTTATTTT+AGG | - | chr8.3:33108214-33108233 | MS.gene067951:intron | 15.0% |
| !!! | TAGTGTTTAAAATAGAAATA+GGG | + | chr8.3:33107134-33107153 | None:intergenic | 15.0% |
| !!! | TTATGTAAATGGTTATTTTA+GGG | - | chr8.3:33108215-33108234 | MS.gene067951:intron | 15.0% |
| !!! | TTTTTTTTTTGTCTAAAACT+CGG | + | chr8.3:33107288-33107307 | None:intergenic | 15.0% |
| !! | TATATTTCACTACAAAAAAG+GGG | + | chr8.3:33107917-33107936 | None:intergenic | 20.0% |
| !! | TGAGTTAAAACTTAAAACTA+AGG | + | chr8.3:33109100-33109119 | None:intergenic | 20.0% |
| !!! | ATCAGTCTATATATTTTACT+TGG | - | chr8.3:33109131-33109150 | MS.gene067951:intron | 20.0% |
| !!! | ATTAGGTCTAATTTTAAAGA+TGG | - | chr8.3:33107570-33107589 | MS.gene067951:intron | 20.0% |
| !!! | GTAGTGTTTAAAATAGAAAT+AGG | + | chr8.3:33107135-33107154 | None:intergenic | 20.0% |
| !!! | TATGTAAATGGTTATTTTAG+GGG | - | chr8.3:33108216-33108235 | MS.gene067951:intron | 20.0% |
| !!! | TTAGGTCTAATTTTAAAGAT+GGG | - | chr8.3:33107571-33107590 | MS.gene067951:intron | 20.0% |
| !!! | TTTTCTTTATTTGAGCTTAA+GGG | - | chr8.3:33107208-33107227 | MS.gene067951:intron | 20.0% |
| !!! | TTTTTCTTTATTTGAGCTTA+AGG | - | chr8.3:33107207-33107226 | MS.gene067951:intron | 20.0% |
| ! | AATAGGGATAATAATTACCT+TGG | + | chr8.3:33107118-33107137 | None:intergenic | 25.0% |
| ! | ACCATAAAATGCTATGTATA+TGG | - | chr8.3:33107951-33107970 | MS.gene067951:intron | 25.0% |
| ! | ACGCTTTATCATTATGTAAA+TGG | - | chr8.3:33108204-33108223 | MS.gene067951:intron | 25.0% |
| ! | CAGTGTTACATAAATGATAA+TGG | - | chr8.3:33107075-33107094 | MS.gene067951:CDS | 25.0% |
| ! | CCATTTCAAAGCAAAAAAAT+GGG | - | chr8.3:33108348-33108367 | MS.gene067951:intron | 25.0% |
| ! | CTTATAGTTTATACGGAAAT+AGG | - | chr8.3:33107377-33107396 | MS.gene067951:intron | 25.0% |
| ! | CTTTGATAAAAATACAGGTT+GGG | + | chr8.3:33108581-33108600 | None:intergenic | 25.0% |
| ! | GTAAATTCAGGATAATAAAG+TGG | - | chr8.3:33108312-33108331 | MS.gene067951:intron | 25.0% |
| ! | TAATAAGTGAATCTGTGATT+AGG | - | chr8.3:33107553-33107572 | MS.gene067951:intron | 25.0% |
| ! | TCCATTTCAAAGCAAAAAAA+TGG | - | chr8.3:33108347-33108366 | MS.gene067951:intron | 25.0% |
| ! | TTATTATCCTGAATTTACCT+GGG | + | chr8.3:33108310-33108329 | None:intergenic | 25.0% |
| ! | TTTATTATCCTGAATTTACC+TGG | + | chr8.3:33108311-33108330 | None:intergenic | 25.0% |
| !! | TCCATATACATAGCATTTTA+TGG | + | chr8.3:33107955-33107974 | None:intergenic | 25.0% |
| !!! | ATAAAGCGTTTTCTTTTCTT+GGG | + | chr8.3:33108193-33108212 | None:intergenic | 25.0% |
| !!! | ATTTTTTCATGGAGATAAAG+AGG | - | chr8.3:33107862-33107881 | MS.gene067951:intron | 25.0% |
| !!! | GTTTTTGGTTTATTGAATTG+TGG | - | chr8.3:33108460-33108479 | MS.gene067951:intron | 25.0% |
| !!! | TTTGCTTCATTTAGAGTTTT+TGG | - | chr8.3:33108445-33108464 | MS.gene067951:intron | 25.0% |
| !!! | TTTTTTCATGGAGATAAAGA+GGG | - | chr8.3:33107863-33107882 | MS.gene067951:intron | 25.0% |
| AACCAAAATCAGTGAAGTAA+TGG | + | chr8.3:33109185-33109204 | None:intergenic | 30.0% | |
| AATCATCTTCACATTTAGTG+TGG | - | chr8.3:33108097-33108116 | MS.gene067951:CDS | 30.0% | |
| AGTATAAGAATGTTGAGACA+TGG | - | chr8.3:33107994-33108013 | MS.gene067951:intron | 30.0% | |
| ATGATAAATTCTCAGACCAT+AGG | - | chr8.3:33109260-33109279 | MS.gene067951:intron | 30.0% | |
| ATGGTCTGAGAATTTATCAT+CGG | + | chr8.3:33109260-33109279 | None:intergenic | 30.0% | |
| ATTCATCAACAACTGATCTA+TGG | - | chr8.3:33109030-33109049 | MS.gene067951:intron | 30.0% | |
| CTGCAATATAACAGATTTAG+AGG | - | chr8.3:33108935-33108954 | MS.gene067951:intron | 30.0% | |
| GCTTTGATAAAAATACAGGT+TGG | + | chr8.3:33108582-33108601 | None:intergenic | 30.0% | |
| GTATAAGAATGTTGAGACAT+GGG | - | chr8.3:33107995-33108014 | MS.gene067951:intron | 30.0% | |
| TAAATGAAGCAAACACATCA+TGG | + | chr8.3:33108438-33108457 | None:intergenic | 30.0% | |
| TGATAAATTCTCAGACCATA+GGG | - | chr8.3:33109261-33109280 | MS.gene067951:intron | 30.0% | |
| TGTTTGAAAAGTCAAAAGAC+CGG | + | chr8.3:33108633-33108652 | None:intergenic | 30.0% | |
| TTGGTTTATTGAATTGTGGT+GGG | - | chr8.3:33108464-33108483 | MS.gene067951:intron | 30.0% | |
| TTTAGACAAGCTTGTCAATT+CGG | + | chr8.3:33108073-33108092 | None:intergenic | 30.0% | |
| ! | GATCAAACTGTTAGCTTAAT+GGG | + | chr8.3:33108690-33108709 | None:intergenic | 30.0% |
| ! | TATTCTTTTGCACTCAGTAT+GGG | + | chr8.3:33108857-33108876 | None:intergenic | 30.0% |
| ! | TGATCAAACTGTTAGCTTAA+TGG | + | chr8.3:33108691-33108710 | None:intergenic | 30.0% |
| ! | TGCAGCTTTGATAAAAATAC+AGG | + | chr8.3:33108586-33108605 | None:intergenic | 30.0% |
| ! | TTATTCTTTTGCACTCAGTA+TGG | + | chr8.3:33108858-33108877 | None:intergenic | 30.0% |
| ! | TTTGGTTTATTGAATTGTGG+TGG | - | chr8.3:33108463-33108482 | MS.gene067951:intron | 30.0% |
| !! | GATAAAGCGTTTTCTTTTCT+TGG | + | chr8.3:33108194-33108213 | None:intergenic | 30.0% |
| !!! | CCCATTTTTTTGCTTTGAAA+TGG | + | chr8.3:33108351-33108370 | None:intergenic | 30.0% |
| !!! | GGAAGCAGTATATTTTTTCA+TGG | - | chr8.3:33107851-33107870 | MS.gene067951:intron | 30.0% |
| !!! | TATGGTTTTGATTTCCACAT+GGG | - | chr8.3:33109048-33109067 | MS.gene067951:intron | 30.0% |
| AAAGCGGTAGCTAAAACAAA+GGG | + | chr8.3:33108155-33108174 | None:intergenic | 35.0% | |
| CAGTTTGATCAATCCTGTTT+AGG | - | chr8.3:33108700-33108719 | MS.gene067951:intron | 35.0% | |
| CATGTAAGTAAGTCCTAAAC+AGG | + | chr8.3:33108716-33108735 | None:intergenic | 35.0% | |
| CGTTGTTACATATGTAGCAT+TGG | + | chr8.3:33107795-33107814 | None:intergenic | 35.0% | |
| CTCATGAACCAGAATAACTT+GGG | + | chr8.3:33107497-33107516 | None:intergenic | 35.0% | |
| GACAGAAAGTGATCATAAAG+CGG | + | chr8.3:33108171-33108190 | None:intergenic | 35.0% | |
| TAAAACTCGGTATACTGCAA+AGG | + | chr8.3:33107275-33107294 | None:intergenic | 35.0% | |
| TAAAGCGGTAGCTAAAACAA+AGG | + | chr8.3:33108156-33108175 | None:intergenic | 35.0% | |
| TATCTGCATTTGCCTTTGAA+AGG | - | chr8.3:33108822-33108841 | MS.gene067951:intron | 35.0% | |
| TCCAATACCATTGAGAAACA+TGG | + | chr8.3:33109010-33109029 | None:intergenic | 35.0% | |
| TCTCATGAACCAGAATAACT+TGG | + | chr8.3:33107498-33107517 | None:intergenic | 35.0% | |
| TGACAAAGTTTACACTACCA+AGG | - | chr8.3:33107098-33107117 | MS.gene067951:CDS | 35.0% | |
| TGGTCTGAGAATTTATCATC+GGG | + | chr8.3:33109259-33109278 | None:intergenic | 35.0% | |
| TGGTTTATTGAATTGTGGTG+GGG | - | chr8.3:33108465-33108484 | MS.gene067951:intron | 35.0% | |
| TTACCAAGAACAAGGTAAGT+GGG | + | chr8.3:33108522-33108541 | None:intergenic | 35.0% | |
| ! | AGTAAGCTGATAGTGAAACA+GGG | + | chr8.3:33108792-33108811 | None:intergenic | 35.0% |
| ! | CATAGCATTTTATGGTCTCT+TGG | + | chr8.3:33107947-33107966 | None:intergenic | 35.0% |
| !! | ATTGGATCTATCGGATTAGT+TGG | - | chr8.3:33107248-33107267 | MS.gene067951:intron | 35.0% |
| !!! | AGTTGCTCTTTGTTTTCAGA+AGG | - | chr8.3:33108250-33108269 | MS.gene067951:intron | 35.0% |
| !!! | CACCATTACTTCACTGATTT+TGG | - | chr8.3:33109180-33109199 | MS.gene067951:intron | 35.0% |
| !!! | CTATGGTTTTGATTTCCACA+TGG | - | chr8.3:33109047-33109066 | MS.gene067951:intron | 35.0% |
| AAACAGGACCCAAGTTATTC+TGG | - | chr8.3:33107486-33107505 | MS.gene067951:intron | 40.0% | |
| AAATGCAATTGTGGCCACAT+TGG | - | chr8.3:33108984-33109003 | MS.gene067951:intron | 40.0% | |
| AAGCGGTAGCTAAAACAAAG+GGG | + | chr8.3:33108154-33108173 | None:intergenic | 40.0% | |
| ACATTGGCCATGTTTCTCAA+TGG | - | chr8.3:33109000-33109019 | MS.gene067951:intron | 40.0% | |
| AGAATAACTTGGGTCCTGTT+TGG | + | chr8.3:33107487-33107506 | None:intergenic | 40.0% | |
| ATTCGCTGTCTAACACATGT+TGG | - | chr8.3:33107679-33107698 | MS.gene067951:intron | 40.0% | |
| ATTGAGAAACATGGCCAATG+TGG | + | chr8.3:33109001-33109020 | None:intergenic | 40.0% | |
| CAACATTGACACATGGACAT+CGG | + | chr8.3:33107758-33107777 | None:intergenic | 40.0% | |
| CGACATCACAAATGCAATTG+TGG | - | chr8.3:33108975-33108994 | MS.gene067951:intron | 40.0% | |
| CTGCAAATGTGTATCCAAAC+AGG | - | chr8.3:33107470-33107489 | MS.gene067951:intron | 40.0% | |
| CTGTTTCACTATCAGCTTAC+TGG | - | chr8.3:33108791-33108810 | MS.gene067951:intron | 40.0% | |
| GACATACAGAGTGTACAGTT+AGG | + | chr8.3:33108495-33108514 | None:intergenic | 40.0% | |
| GCCATGTTTCTCAATGGTAT+TGG | - | chr8.3:33109006-33109025 | MS.gene067951:intron | 40.0% | |
| GGTTTATTGAATTGTGGTGG+GGG | - | chr8.3:33108466-33108485 | MS.gene067951:intron | 40.0% | |
| GTCTAACACATGTTGGTATC+AGG | - | chr8.3:33107686-33107705 | MS.gene067951:intron | 40.0% | |
| GTTACCAAGAACAAGGTAAG+TGG | + | chr8.3:33108523-33108542 | None:intergenic | 40.0% | |
| TATATGCATCTACTCCCATG+TGG | + | chr8.3:33109065-33109084 | None:intergenic | 40.0% | |
| TGTTGCCACAATATGACTGT+CGG | - | chr8.3:33107830-33107849 | MS.gene067951:intron | 40.0% | |
| TTATATTGCAGCCGCAGTTA+CGG | + | chr8.3:33108926-33108945 | None:intergenic | 40.0% | |
| TTTCAGAAGGAATCACCACT+GGG | - | chr8.3:33108263-33108282 | MS.gene067951:intron | 40.0% | |
| ! | AAAGATGGGTTTGCACTGAT+AGG | - | chr8.3:33107585-33107604 | MS.gene067951:intron | 40.0% |
| ! | AGCTTAAGGGCATGTTTGAA+CGG | - | chr8.3:33107221-33107240 | MS.gene067951:intron | 40.0% |
| ! | AGTTCTGATGTTGCTGTATG+TGG | - | chr8.3:33108408-33108427 | MS.gene067951:intron | 40.0% |
| ! | ATACAGGTTGGGATCATATC+AGG | + | chr8.3:33108570-33108589 | None:intergenic | 40.0% |
| ! | CAGTAAGCTGATAGTGAAAC+AGG | + | chr8.3:33108793-33108812 | None:intergenic | 40.0% |
| ! | TTTTCAGAAGGAATCACCAC+TGG | - | chr8.3:33108262-33108281 | MS.gene067951:intron | 40.0% |
| !! | GTTATTCTGGTTCATGAGAG+AGG | - | chr8.3:33107499-33107518 | MS.gene067951:intron | 40.0% |
| AACGGTGGGATTGGATCTAT+CGG | - | chr8.3:33107239-33107258 | MS.gene067951:intron | 45.0% | |
| AGCGGTAGCTAAAACAAAGG+GGG | + | chr8.3:33108153-33108172 | None:intergenic | 45.0% | |
| ATGGGCAGAATGTTGGACAT+TGG | - | chr8.3:33108013-33108032 | MS.gene067951:intron | 45.0% | |
| CCAGACACAACATTGACACA+TGG | + | chr8.3:33107765-33107784 | None:intergenic | 45.0% | |
| CCATGTGTCAATGTTGTGTC+TGG | - | chr8.3:33107762-33107781 | MS.gene067951:intron | 45.0% | |
| GAACCCACTTACCTTGTTCT+TGG | - | chr8.3:33108516-33108535 | MS.gene067951:intron | 45.0% | |
| GCGAATACGCCTTCATTCTA+TGG | + | chr8.3:33107665-33107684 | None:intergenic | 45.0% | |
| GGGTACTTGCTTCCTTTCAA+AGG | + | chr8.3:33108837-33108856 | None:intergenic | 45.0% | |
| TACGGTCGTAGAAGGGTTTA+GGG | + | chr8.3:33108908-33108927 | None:intergenic | 45.0% | |
| TGCTTCCGACAGTCATATTG+TGG | + | chr8.3:33107838-33107857 | None:intergenic | 45.0% | |
| TTACGGTCGTAGAAGGGTTT+AGG | + | chr8.3:33108909-33108928 | None:intergenic | 45.0% | |
| TTGAGACATGGGCAGAATGT+TGG | - | chr8.3:33108006-33108025 | MS.gene067951:intron | 45.0% | |
| ! | GAGCTTTTGCATAGAATCGC+CGG | - | chr8.3:33108611-33108630 | MS.gene067951:intron | 45.0% |
| ! | GCACTGACACCATAGAATGA+AGG | - | chr8.3:33107653-33107672 | MS.gene067951:intron | 45.0% |
| ! | TAAGGGCATGTTTGAACGGT+GGG | - | chr8.3:33107225-33107244 | MS.gene067951:intron | 45.0% |
| ! | TTAAGGGCATGTTTGAACGG+TGG | - | chr8.3:33107224-33107243 | MS.gene067951:intron | 45.0% |
| CAGCTCACCCAGGTAAATTC+AGG | - | chr8.3:33108300-33108319 | MS.gene067951:intron | 50.0% | |
| CGAGCGTGTTACCAAGAACA+AGG | + | chr8.3:33108530-33108549 | None:intergenic | 50.0% | |
| GAAGGAATCACCACTGGGTT+CGG | - | chr8.3:33108268-33108287 | MS.gene067951:intron | 50.0% | |
| GCATGTTTGAACGGTGGGAT+TGG | - | chr8.3:33107230-33107249 | MS.gene067951:intron | 50.0% | |
| TGGTATCAGGCACAAACACG+TGG | - | chr8.3:33107699-33107718 | MS.gene067951:intron | 50.0% | |
| ! | CTATGGTGTCAGTGCTACGT+AGG | + | chr8.3:33107648-33107667 | None:intergenic | 50.0% |
| CCCTTCTACGACCGTAACTG+CGG | - | chr8.3:33108912-33108931 | MS.gene067951:intron | 55.0% | |
| CCGCAGTTACGGTCGTAGAA+GGG | + | chr8.3:33108915-33108934 | None:intergenic | 55.0% | |
| GCTTCTTCAGACGCACCCTA+TGG | + | chr8.3:33109279-33109298 | None:intergenic | 55.0% | |
| !! | GTGCGTCTGAAGAAGCGCTT+TGG | - | chr8.3:33109283-33109302 | MS.gene067951:intron | 55.0% |
| GACTCTGTTGCCGAACCCAG+TGG | + | chr8.3:33108281-33108300 | None:intergenic | 60.0% | |
| GCAACAGAGTCAGCTCACCC+AGG | - | chr8.3:33108290-33108309 | MS.gene067951:intron | 60.0% | |
| GCCGCAGTTACGGTCGTAGA+AGG | + | chr8.3:33108916-33108935 | None:intergenic | 60.0% | |
| TGCCAACTCAGCAGCCACCT+CGG | - | chr8.3:33109311-33109330 | MS.gene067951:CDS | 60.0% | |
| TTCCGAGGTGGCTGCTGAGT+TGG | + | chr8.3:33109316-33109335 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 33107066 | 33109342 | 33107066 | ID=MS.gene067951 |
| chr8.3 | mRNA | 33107066 | 33109342 | 33107066 | ID=MS.gene067951.t1;Parent=MS.gene067951 |
| chr8.3 | exon | 33109289 | 33109342 | 33109289 | ID=MS.gene067951.t1.exon1;Parent=MS.gene067951.t1 |
| chr8.3 | CDS | 33109289 | 33109342 | 33109289 | ID=cds.MS.gene067951.t1;Parent=MS.gene067951.t1 |
| chr8.3 | exon | 33108097 | 33108139 | 33108097 | ID=MS.gene067951.t1.exon2;Parent=MS.gene067951.t1 |
| chr8.3 | CDS | 33108097 | 33108139 | 33108097 | ID=cds.MS.gene067951.t1;Parent=MS.gene067951.t1 |
| chr8.3 | exon | 33107066 | 33107163 | 33107066 | ID=MS.gene067951.t1.exon3;Parent=MS.gene067951.t1 |
| chr8.3 | CDS | 33107066 | 33107163 | 33107066 | ID=cds.MS.gene067951.t1;Parent=MS.gene067951.t1 |
| Gene Sequence |
| Protein sequence |
