AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028023

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028023.t1 MTR_5g027840 96.565 524 17 1 1 524 1 523 0.0 980
MS.gene028023.t1 MTR_2g100230 45.316 459 229 6 32 487 35 474 8.54e-128 382
MS.gene028023.t1 MTR_4g105100 47.493 379 191 4 103 479 200 572 7.49e-117 358
MS.gene028023.t1 MTR_6g005550 43.609 399 210 8 88 483 152 538 1.85e-103 326
MS.gene028023.t1 MTR_2g032630 43.073 397 215 7 95 488 486 874 4.14e-97 319
MS.gene028023.t1 MTR_7g109720 42.857 406 221 7 95 496 222 620 7.20e-94 302
MS.gene028023.t1 MTR_3g083690 40.185 433 236 8 71 488 115 539 2.06e-87 281
MS.gene028023.t1 MTR_4g105100 44.817 328 173 4 103 428 200 521 1.09e-86 277
MS.gene028023.t1 MTR_4g114120 37.209 516 285 11 3 486 26 534 4.16e-86 280
MS.gene028023.t1 MTR_2g007000 42.746 386 209 6 103 483 502 880 1.14e-85 286
MS.gene028023.t1 MTR_1g054630 38.926 447 250 8 72 502 125 564 1.64e-85 276
MS.gene028023.t1 MTR_3g467550 38.845 381 221 5 103 475 115 491 1.94e-80 261
MS.gene028023.t1 MTR_3g467550 40.278 360 205 4 122 475 105 460 2.03e-80 261
MS.gene028023.t1 MTR_1g095810 38.228 395 227 8 96 480 136 523 7.17e-78 256
MS.gene028023.t1 MTR_1g026830 37.468 395 230 8 96 480 138 525 4.34e-76 251
MS.gene028023.t1 MTR_4g134170 37.157 401 220 6 108 485 290 681 1.16e-74 250
MS.gene028023.t1 MTR_6g005320 36.207 406 225 7 103 485 247 641 1.41e-72 243
MS.gene028023.t1 MTR_5g090120 39.045 356 200 9 110 459 86 430 1.55e-72 241
MS.gene028023.t1 MTR_3g449250 41.018 334 190 5 120 453 107 433 2.20e-72 240
MS.gene028023.t1 MTR_3g449250 41.018 334 190 5 120 453 107 433 9.35e-72 239
MS.gene028023.t1 MTR_7g056830 38.611 360 207 7 97 453 2 350 2.40e-65 218
MS.gene028023.t1 MTR_6g082080 38.611 360 207 7 97 453 2 350 2.45e-65 218
MS.gene028023.t1 MTR_3g467550 37.982 337 197 5 103 431 115 447 1.62e-64 217
MS.gene028023.t1 MTR_6g056080 37.746 355 206 6 127 476 127 471 1.65e-60 211
MS.gene028023.t1 MTR_1g102410 36.490 359 201 5 120 457 61 413 1.02e-58 206
MS.gene028023.t1 MTR_7g076820 33.067 375 226 7 95 459 133 492 4.97e-58 201
MS.gene028023.t1 MTR_7g076830 33.243 367 225 6 98 459 134 485 9.14e-58 201
MS.gene028023.t1 MTR_7g076800 33.243 367 225 6 98 459 132 483 1.29e-57 200
MS.gene028023.t1 MTR_3g049990 32.678 407 243 8 106 497 153 543 1.82e-57 204
MS.gene028023.t1 MTR_4g079320 35.014 357 218 7 106 458 20 366 2.36e-57 204
MS.gene028023.t1 MTR_2g041140 34.959 369 217 7 106 464 142 497 6.16e-57 202
MS.gene028023.t1 MTR_2g066050 32.908 392 244 6 94 479 44 422 3.88e-56 196
MS.gene028023.t1 MTR_6g033070 32.987 385 250 7 103 484 138 517 2.66e-54 192
MS.gene028023.t1 MTR_4g125970 33.247 388 238 7 96 474 28 403 3.73e-53 186
MS.gene028023.t1 MTR_2g039960 34.341 364 222 6 97 458 36 384 4.54e-53 185
MS.gene028023.t1 MTR_4g125970 33.247 388 238 7 96 474 45 420 1.30e-52 184
MS.gene028023.t1 MTR_2g438110 31.856 361 232 4 98 456 27 375 2.67e-52 183
MS.gene028023.t1 MTR_8g018400 33.333 369 228 6 96 458 28 384 4.26e-51 180
MS.gene028023.t1 MTR_2g099620 33.333 369 228 6 96 458 12 368 5.65e-51 179
MS.gene028023.t1 MTR_2g099620 33.333 369 228 6 96 458 28 384 7.37e-51 179
MS.gene028023.t1 MTR_8g027775 32.174 460 260 16 24 451 18 457 2.51e-50 181
MS.gene028023.t1 MTR_3g071620 34.127 378 217 12 105 457 14 384 8.75e-49 177
MS.gene028023.t1 MTR_8g027780 30.667 450 278 12 24 451 24 461 7.53e-48 175
MS.gene028023.t1 MTR_6g039840 32.152 395 244 9 97 474 102 489 3.44e-47 174
MS.gene028023.t1 MTR_8g027770 32.918 401 240 12 68 451 168 556 2.29e-45 169
MS.gene028023.t1 MTR_7g100820 31.768 362 231 7 121 480 152 499 1.40e-44 166
MS.gene028023.t1 MTR_1g012420 32.277 347 208 8 121 458 65 393 3.64e-42 156
MS.gene028023.t1 MTR_3g107420 32.565 347 207 8 121 458 65 393 4.93e-42 155
MS.gene028023.t1 MTR_7g057250 29.825 399 210 9 121 453 181 575 5.24e-42 160
MS.gene028023.t1 MTR_4g010565 32.081 346 210 7 121 458 142 470 1.30e-40 153
MS.gene028023.t1 MTR_2g055850 31.793 368 226 9 102 457 88 442 2.99e-40 153
MS.gene028023.t1 MTR_4g112340 33.133 332 207 8 121 446 115 437 3.50e-40 153
MS.gene028023.t1 MTR_8g097000 29.885 435 248 12 41 451 242 643 7.24e-40 154
MS.gene028023.t1 MTR_1g061970 31.407 398 218 15 90 451 65 443 1.32e-39 150
MS.gene028023.t1 MTR_0915s0010 30.241 291 189 3 120 410 6 282 4.64e-39 144
MS.gene028023.t1 MTR_8g027780 29.371 429 269 13 24 430 24 440 8.96e-39 147
MS.gene028023.t1 MTR_2g063080 30.562 409 225 11 102 456 106 509 9.96e-39 149
MS.gene028023.t1 MTR_4g059460 27.727 440 241 11 92 457 29 465 2.70e-37 145
MS.gene028023.t1 MTR_6g039840 32.166 314 192 7 175 474 7 313 4.99e-37 143
MS.gene028023.t1 MTR_2g043360 27.586 406 222 9 121 457 60 462 3.27e-36 142
MS.gene028023.t1 MTR_4g068990 31.694 366 220 10 99 446 62 415 2.22e-35 141
MS.gene028023.t1 MTR_4g049910 29.540 457 257 14 68 501 25 439 3.77e-35 137
MS.gene028023.t1 MTR_3g118120 27.079 469 295 17 23 456 50 506 6.32e-35 138
MS.gene028023.t1 MTR_5g092560 32.047 337 212 8 128 457 101 427 2.33e-34 138
MS.gene028023.t1 MTR_1g083130 28.607 402 232 11 104 458 25 418 5.69e-32 130
MS.gene028023.t1 MTR_5g069330 27.604 384 255 10 103 480 5 371 2.82e-30 123
MS.gene028023.t1 MTR_5g069330 27.604 384 255 10 103 480 1 367 3.24e-30 122
MS.gene028023.t1 MTR_4g131750 28.571 385 214 15 102 446 79 442 5.61e-25 108
MS.gene028023.t1 MTR_1g046570 26.810 373 228 9 120 458 8 369 1.39e-24 106
MS.gene028023.t1 MTR_4g077370 35.577 208 110 6 94 292 242 434 2.28e-24 106
MS.gene028023.t1 MTR_4g077370 33.679 193 98 5 106 292 3 171 9.22e-19 89.4
MS.gene028023.t1 MTR_4g112320 31.356 236 155 5 214 446 24 255 2.57e-24 105
MS.gene028023.t1 MTR_8g018370 27.829 327 199 8 134 458 4 295 6.59e-24 102
MS.gene028023.t1 MTR_4g459350 33.679 193 119 5 92 277 26 216 4.03e-22 96.7
MS.gene028023.t1 MTR_2g043360 25.159 314 166 7 212 457 32 344 8.52e-21 95.9
MS.gene028023.t1 MTR_8g032230 36.735 147 84 3 97 241 2 141 7.75e-20 87.4
MS.gene028023.t1 MTR_8g042690 24.566 346 226 10 128 457 43 369 2.08e-19 91.3
MS.gene028023.t1 MTR_5g092560 29.717 212 137 6 252 457 11 216 1.79e-16 82.8
MS.gene028023.t1 MTR_4g068990 31.068 206 127 7 253 451 12 209 3.32e-16 81.6
MS.gene028023.t1 MTR_1g050730 23.932 351 252 11 139 483 176 517 6.40e-16 80.9
MS.gene028023.t1 MTR_8g080160 23.691 401 257 10 69 457 233 596 1.07e-15 80.9
MS.gene028023.t1 MTR_3g107420 32.990 194 107 6 121 305 65 244 5.68e-14 73.2
MS.gene028023.t1 MTR_8g062720 35.433 127 73 3 354 478 436 555 3.03e-13 72.8
MS.gene028023.t1 MTR_1g023070 33.333 132 61 5 377 505 27 134 8.26e-13 67.4
MS.gene028023.t1 MTR_1g023070 33.333 132 61 5 377 505 27 134 8.35e-13 67.8
MS.gene028023.t1 MTR_0427s0010 38.095 105 51 1 361 451 73 177 2.63e-12 67.0
MS.gene028023.t1 MTR_1g022305 36.792 106 49 3 388 478 222 324 1.12e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028023.t1 AT1G31970 77.626 438 97 1 88 524 100 537 0.0 718
MS.gene028023.t1 AT5G63120 48.284 408 199 6 78 483 143 540 1.79e-127 384
MS.gene028023.t1 AT1G55150 49.871 387 186 4 103 487 98 478 1.20e-125 377
MS.gene028023.t1 AT1G55150 44.444 459 234 5 31 487 64 503 4.92e-125 376
MS.gene028023.t1 AT5G14610 43.928 387 206 7 106 489 163 541 1.96e-102 322
MS.gene028023.t1 AT5G14610 43.928 387 206 7 106 489 163 541 2.19e-102 321
MS.gene028023.t1 AT5G14610 43.928 387 206 7 106 489 171 549 3.70e-102 321
MS.gene028023.t1 AT3G01540 42.894 387 210 7 106 489 160 538 1.06e-100 316
MS.gene028023.t1 AT3G01540 42.894 387 210 7 106 489 160 538 1.24e-100 316
MS.gene028023.t1 AT3G01540 42.894 387 210 7 106 489 160 538 1.24e-100 316
MS.gene028023.t1 AT3G01540 42.894 387 210 7 106 489 160 538 1.24e-100 316
MS.gene028023.t1 AT5G14610 44.032 377 202 6 114 489 42 410 3.75e-100 311
MS.gene028023.t1 AT5G14610 44.032 377 202 6 114 489 42 410 3.75e-100 311
MS.gene028023.t1 AT3G06480 44.750 400 204 8 88 483 423 809 2.70e-99 323
MS.gene028023.t1 AT5G14610 43.832 381 204 7 111 489 237 609 5.36e-98 312
MS.gene028023.t1 AT5G63120 45.029 342 176 6 78 417 143 474 2.93e-93 293
MS.gene028023.t1 AT5G63120 45.029 342 176 6 78 417 143 474 5.99e-93 292
MS.gene028023.t1 AT5G63120 45.029 342 176 6 78 417 143 474 5.99e-93 292
MS.gene028023.t1 AT5G63120 45.029 342 176 6 78 417 143 474 5.99e-93 292
MS.gene028023.t1 AT2G42520 41.966 417 222 7 85 488 144 553 1.43e-90 290
MS.gene028023.t1 AT2G42520 41.966 417 222 7 85 488 144 553 1.43e-90 290
MS.gene028023.t1 AT2G42520 41.966 417 222 7 85 488 144 553 1.43e-90 290
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 190 581 2.69e-90 294
MS.gene028023.t1 AT2G47330 42.494 393 215 7 95 483 219 604 6.47e-90 292
MS.gene028023.t1 AT3G58570 42.308 416 214 9 93 490 135 542 6.87e-90 289
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT1G20920 42.105 399 217 7 103 494 528 919 6.30e-89 296
MS.gene028023.t1 AT3G58510 43.272 379 202 7 119 488 169 543 1.49e-87 282
MS.gene028023.t1 AT3G58510 43.272 379 202 7 119 488 169 543 1.49e-87 282
MS.gene028023.t1 AT3G58510 43.272 379 202 7 119 488 169 543 1.49e-87 282
MS.gene028023.t1 AT3G09620 40.415 386 189 8 103 483 395 744 8.21e-81 272
MS.gene028023.t1 AT3G09620 40.415 386 189 8 103 483 396 745 8.57e-81 271
MS.gene028023.t1 AT5G14610 42.090 335 183 7 106 437 171 497 9.11e-81 261
MS.gene028023.t1 AT5G51280 37.561 410 239 8 96 495 138 540 4.54e-79 259
MS.gene028023.t1 AT3G06480 42.274 343 181 8 88 426 423 752 1.08e-76 257
MS.gene028023.t1 AT3G22330 41.108 343 193 6 118 459 120 454 1.39e-76 253
MS.gene028023.t1 AT4G33370 37.136 412 238 8 96 495 89 491 1.19e-75 249
MS.gene028023.t1 AT3G22310 40.974 349 195 7 108 453 120 460 1.77e-75 249
MS.gene028023.t1 AT3G22310 40.974 349 195 7 108 453 120 460 2.47e-75 249
MS.gene028023.t1 AT2G33730 36.207 406 227 6 103 485 312 708 2.34e-71 242
MS.gene028023.t1 AT5G26742 39.496 357 205 7 111 462 109 459 1.72e-66 229
MS.gene028023.t1 AT5G26742 39.496 357 205 7 111 462 109 459 1.75e-66 229
MS.gene028023.t1 AT5G60990 36.364 363 219 6 97 452 2 359 2.74e-66 221
MS.gene028023.t1 AT5G26742 40.729 329 186 6 137 462 44 366 3.26e-65 224
MS.gene028023.t1 AT1G28180 37.465 355 214 4 132 485 3 350 1.42e-63 212
MS.gene028023.t1 AT5G62190 38.012 342 201 6 121 457 115 450 9.38e-62 214
MS.gene028023.t1 AT1G16280 35.537 363 219 5 101 458 55 407 3.01e-60 206
MS.gene028023.t1 AT4G00660 34.332 367 221 7 98 459 123 474 8.83e-60 206
MS.gene028023.t1 AT4G00660 34.332 367 221 7 98 459 123 474 8.83e-60 206
MS.gene028023.t1 AT2G45810 33.607 366 225 5 98 459 146 497 8.26e-58 201
MS.gene028023.t1 AT4G16630 34.959 369 216 8 106 464 169 523 2.76e-57 204
MS.gene028023.t1 AT3G61240 32.979 376 226 5 91 459 111 467 1.01e-56 197
MS.gene028023.t1 AT3G61240 32.979 376 226 5 91 459 111 467 1.01e-56 197
MS.gene028023.t1 AT3G02065 32.250 400 255 6 103 493 109 501 4.73e-55 193
MS.gene028023.t1 AT3G02065 32.250 400 255 6 103 493 109 501 4.73e-55 193
MS.gene028023.t1 AT1G77030 35.180 361 212 8 106 458 30 376 6.39e-54 195
MS.gene028023.t1 AT3G19760 32.584 356 226 5 103 456 34 377 1.13e-52 184
MS.gene028023.t1 AT3G13920 33.515 367 225 6 97 459 28 379 2.59e-52 183
MS.gene028023.t1 AT1G72730 33.621 348 219 4 121 468 60 395 9.01e-52 182
MS.gene028023.t1 AT3G13920 33.333 369 228 6 97 459 28 384 9.35e-52 182
MS.gene028023.t1 AT3G13920 33.424 368 227 6 97 458 18 373 9.80e-52 181
MS.gene028023.t1 AT1G54270 33.607 366 224 6 97 458 28 378 1.53e-51 181
MS.gene028023.t1 AT1G51380 31.742 356 229 5 103 456 21 364 2.57e-51 180
MS.gene028023.t1 AT3G13920 33.333 369 228 6 97 459 28 384 3.09e-51 181
MS.gene028023.t1 AT3G13920 33.333 369 228 6 97 459 32 388 4.25e-51 180
MS.gene028023.t1 AT1G54270 33.424 368 227 6 97 458 28 383 6.60e-51 179
MS.gene028023.t1 AT3G02065 31.892 370 238 5 131 493 2 364 8.92e-50 175
MS.gene028023.t1 AT4G09730 31.186 388 243 9 103 473 111 491 4.65e-48 176
MS.gene028023.t1 AT3G09720 29.747 474 279 13 23 484 80 511 5.73e-48 174
MS.gene028023.t1 AT3G09720 29.747 474 279 13 23 484 80 511 5.73e-48 174
MS.gene028023.t1 AT5G08610 33.333 372 221 10 98 451 376 738 3.11e-45 171
MS.gene028023.t1 AT1G71370 32.337 368 231 10 102 457 12 373 5.13e-45 167
MS.gene028023.t1 AT5G65900 32.133 361 231 8 104 458 154 506 4.93e-44 165
MS.gene028023.t1 AT5G63630 31.892 370 238 7 93 451 44 410 8.43e-44 162
MS.gene028023.t1 AT5G05450 33.048 351 216 8 122 457 36 382 9.16e-44 164
MS.gene028023.t1 AT5G08620 31.675 382 243 9 83 451 60 436 1.86e-43 162
MS.gene028023.t1 AT5G63630 31.892 370 238 7 93 451 238 604 3.61e-43 164
MS.gene028023.t1 AT5G11170 31.579 361 229 8 121 478 65 410 3.89e-42 156
MS.gene028023.t1 AT5G11200 31.579 361 229 8 121 478 65 410 3.89e-42 156
MS.gene028023.t1 AT3G18600 33.333 336 213 6 121 453 108 435 5.76e-41 155
MS.gene028023.t1 AT1G63250 30.180 444 267 10 20 451 273 685 1.91e-39 153
MS.gene028023.t1 AT3G53110 31.510 384 230 13 94 457 81 451 1.55e-38 147
MS.gene028023.t1 AT3G16840 28.535 396 216 9 122 453 211 603 2.73e-38 150
MS.gene028023.t1 AT3G16840 28.535 396 216 9 122 453 210 602 2.96e-38 150
MS.gene028023.t1 AT2G07750 32.425 367 233 9 97 451 369 732 3.82e-38 149
MS.gene028023.t1 AT5G11170 31.085 341 217 8 141 478 2 327 6.04e-37 140
MS.gene028023.t1 AT1G12770 27.861 402 242 9 102 455 108 509 1.39e-36 143
MS.gene028023.t1 AT1G12770 27.861 402 242 9 102 455 108 509 1.39e-36 143
MS.gene028023.t1 AT5G54910 30.529 416 265 12 99 506 66 465 2.90e-36 144
MS.gene028023.t1 AT5G11200 29.024 379 215 7 121 456 65 432 1.19e-35 139
MS.gene028023.t1 AT2G40700 28.117 409 218 12 121 457 50 454 4.50e-34 136
MS.gene028023.t1 AT3G06980 28.329 413 246 16 93 469 363 761 7.62e-34 136
MS.gene028023.t1 AT4G34910 28.900 391 229 8 102 447 44 430 1.37e-33 135
MS.gene028023.t1 AT1G71280 32.075 318 178 10 111 421 24 310 1.53e-31 124
MS.gene028023.t1 AT1G71280 31.348 319 181 9 111 422 24 311 3.50e-31 126
MS.gene028023.t1 AT1G51380 30.116 259 167 5 103 359 21 267 2.90e-28 114
MS.gene028023.t1 AT5G19210 29.759 373 204 15 111 446 83 434 1.62e-27 115
MS.gene028023.t1 AT1G51380 31.818 220 139 4 103 320 21 231 2.57e-27 112
MS.gene028023.t1 AT1G51380 31.818 220 139 4 103 320 21 231 4.15e-27 111
MS.gene028023.t1 AT4G15850 25.974 385 207 11 140 459 73 444 1.09e-23 104
MS.gene028023.t1 AT2G28600 26.923 312 208 8 176 481 194 491 3.66e-19 90.9
MS.gene028023.t1 AT5G11200 29.091 220 141 4 239 456 244 450 4.80e-19 90.5
MS.gene028023.t1 AT5G11200 32.447 188 116 5 121 305 65 244 4.20e-15 78.2
MS.gene028023.t1 AT1G28180 38.053 113 70 0 132 244 3 115 1.95e-18 81.6
MS.gene028023.t1 AT5G19210 28.030 264 165 8 203 446 19 277 8.01e-16 79.0
MS.gene028023.t1 AT5G19210 28.030 264 165 8 203 446 19 277 8.01e-16 79.0
MS.gene028023.t1 AT1G27880 23.059 438 282 11 71 496 231 625 1.04e-13 74.7
MS.gene028023.t1 AT1G27880 23.059 438 282 11 71 496 231 625 1.24e-13 74.3
MS.gene028023.t1 AT1G59990 32.231 121 77 2 355 475 426 541 1.51e-11 67.4
MS.gene028023.t1 AT1G59990 32.231 121 77 2 355 475 426 541 1.58e-11 67.4

Find 117 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTAGCTCAGGAATTTA+TGG 0.153581 5.3:-17272104 MS.gene028023:CDS
GTGAAGAGGTTTGAGGATTC+AGG 0.231036 5.3:-17275452 MS.gene028023:CDS
GAAGATTATGTTCATAGAAT+TGG 0.238610 5.3:-17270936 MS.gene028023:CDS
TGGCACACATGTTAAGAAAA+AGG 0.253159 5.3:-17270653 MS.gene028023:intron
ATATAGGAGTCCAAGCTTTA+TGG 0.255279 5.3:-17270518 MS.gene028023:intron
GGAATATTTCAGGGACTTGC+TGG 0.276066 5.3:-17270736 MS.gene028023:intron
CTAGGGAAGACACTTGCTTT+TGG 0.301902 5.3:-17274333 MS.gene028023:intron
GTGGAATCAGTTTGTTTGTA+TGG 0.320024 5.3:-17273007 MS.gene028023:CDS
ATTCTTCACACATTTGAATA+AGG 0.322677 5.3:-17270874 MS.gene028023:intron
ACATAATCTTCTAGAGTTAG+AGG 0.337678 5.3:+17270948 None:intergenic
TATTCAAGATCTGGTTGAAA+TGG 0.345946 5.3:-17272748 MS.gene028023:CDS
GAGTTCTGTGTTGTTGTTAA+GGG 0.348271 5.3:+17275712 None:intergenic
TTGATTGGAATTGCGGCAAC+TGG 0.349586 5.3:-17275335 MS.gene028023:CDS
TTCATCCAGGATATTGTCAT+TGG 0.350181 5.3:-17272783 MS.gene028023:intron
TATAGGAGTCCAAGCTTTAT+GGG 0.366000 5.3:-17270517 MS.gene028023:intron
TGATGTGTTGGTTTCGGCCT+CGG 0.367548 5.3:-17275528 MS.gene028023:CDS
CCACAAAAGATACTTCTTGT+AGG 0.370133 5.3:+17272715 None:intergenic
ATACTTGGTCAGACATGTTC+TGG 0.373447 5.3:-17272325 MS.gene028023:intron
TTCTGGTTCGGTGGATAAAA+CGG 0.378366 5.3:+17275739 None:intergenic
AAGATTATGTTCATAGAATT+GGG 0.393407 5.3:-17270935 MS.gene028023:CDS
CGGCGGTGATGTGTTGGTTT+CGG 0.396234 5.3:-17275534 MS.gene028023:CDS
TGAGTTCTGTGTTGTTGTTA+AGG 0.400441 5.3:+17275711 None:intergenic
AGTGATTTGTGGTTGTTTGT+TGG 0.401420 5.3:+17272979 None:intergenic
GGAATTGCGGCAACTGGGTC+AGG 0.401748 5.3:-17275329 MS.gene028023:intron
CAAATAGTCCGCTCTATACT+TGG 0.405601 5.3:-17272340 MS.gene028023:CDS
CTCCGATTCAATCACGTGCT+TGG 0.415933 5.3:-17275382 MS.gene028023:CDS
GCTTTATGGGGCTCACTTCA+AGG 0.417352 5.3:-17270504 MS.gene028023:CDS
TTAGACTTTGGAGCATCAAC+AGG 0.417852 5.3:+17270476 None:intergenic
TATTTGCATGACATCATGAT+TGG 0.425052 5.3:+17271966 None:intergenic
TTGATCACTACTTCAACATC+TGG 0.425118 5.3:+17270981 None:intergenic
TCAAATGTGTGAAGAATGTA+TGG 0.428680 5.3:+17270880 None:intergenic
TTCTTTCCAGTCACCACAAT+CGG 0.429048 5.3:+17275500 None:intergenic
CCAAATTTCAAAAGATCGTC+TGG 0.430831 5.3:+17270673 None:intergenic
AACTTGTGACAGGTTGTTGT+AGG 0.435320 5.3:-17272006 MS.gene028023:intron
GTTCATAGAATTGGGCGGAC+TGG 0.441574 5.3:-17270927 MS.gene028023:CDS
GAATGGAAGCTGTCCTTTGA+TGG 0.441746 5.3:-17271497 MS.gene028023:intron
CAAATCACTGCACTAAAATC+TGG 0.442805 5.3:-17272965 MS.gene028023:CDS
CCCTCGTAGGAGAGAGCATA+AGG 0.444894 5.3:+17274238 None:intergenic
CTTTCTCAGGAATCGAGTAT+TGG 0.445276 5.3:-17271787 MS.gene028023:intron
TTGTTGTTAAGGGTTTGTTC+TGG 0.450386 5.3:+17275722 None:intergenic
TTGGATGGTCGTGATTTGAT+TGG 0.453523 5.3:-17275350 MS.gene028023:CDS
CATGCAAATAGTTGAGGTAT+TGG 0.459321 5.3:-17271953 MS.gene028023:CDS
TGATGTGGCTGCACGAGGAT+TGG 0.459395 5.3:-17271009 MS.gene028023:CDS
GTTAAGGGTTTGTTCTGGTT+CGG 0.462184 5.3:+17275727 None:intergenic
TCCCGGTCGTATTCAAGATC+TGG 0.466067 5.3:-17272757 MS.gene028023:CDS
GAATATTTCAGGGACTTGCT+GGG 0.474454 5.3:-17270735 MS.gene028023:intron
AACCAGATCTTGAATACGAC+CGG 0.475620 5.3:+17272755 None:intergenic
TTCGGCGTCGTATTGAAGAT+TGG 0.478861 5.3:+17275613 None:intergenic
CCTTATGCTCTCTCCTACGA+GGG 0.480938 5.3:-17274238 MS.gene028023:CDS
GCACTATCATTATTCAAGAA+TGG 0.480956 5.3:-17271514 MS.gene028023:CDS
GAATGTGCTTGAGTGTTGTA+AGG 0.481590 5.3:-17275420 MS.gene028023:CDS
CAACACTCAAGCACATTCTC+AGG 0.482405 5.3:+17275425 None:intergenic
ATTCAAGATCTGGTTGAAAT+GGG 0.496635 5.3:-17272747 MS.gene028023:CDS
TGAAGAGGTTTGAGGATTCA+GGG 0.496727 5.3:-17275451 MS.gene028023:CDS
CGCCGTGTATTTCTCATCTC+CGG 0.502457 5.3:+17275475 None:intergenic
TTCATAACATGCATAATAGC+TGG 0.502973 5.3:+17274306 None:intergenic
AGCAGTTCATCACTTAGCTC+AGG 0.508831 5.3:-17272113 MS.gene028023:CDS
GCAAAGAGGATTCCGACCCT+TGG 0.519670 5.3:+17274260 None:intergenic
ACTGGACGAGCTGGTAAGAA+AGG 0.524323 5.3:-17270909 MS.gene028023:CDS
CCCAAAAGAAAACACGAAAA+CGG 0.527156 5.3:-17275641 MS.gene028023:CDS
ATAAAACAGCATACCATCAA+AGG 0.542882 5.3:+17271484 None:intergenic
TTACAACGGCGGTGATGTGT+TGG 0.544592 5.3:-17275540 MS.gene028023:CDS
AGCAGATCGGATGCTTGACA+TGG 0.547306 5.3:-17272371 MS.gene028023:CDS
GGCCAAGCACGTGATTGAAT+CGG 0.548949 5.3:+17275380 None:intergenic
CACGGCGGTGAAGAGGTTTG+AGG 0.550986 5.3:-17275459 MS.gene028023:CDS
GAAGAGCAAGGGTTCTTCCA+AGG 0.552135 5.3:-17274277 MS.gene028023:CDS
TGTACAAATGGGAAACCACA+CGG 0.557076 5.3:-17271755 MS.gene028023:CDS
ATGAATAAGCGGAAGAGCAA+GGG 0.557187 5.3:-17274288 MS.gene028023:CDS
ATTGGGCGGACTGGACGAGC+TGG 0.562548 5.3:-17270918 MS.gene028023:CDS
GAAGTGAGCCCCATAAAGCT+TGG 0.565873 5.3:+17270508 None:intergenic
TCAGATGTATTGTGTGATGC+TGG 0.566166 5.3:-17273043 MS.gene028023:CDS
AAGGGTTTGTTCTGGTTCGG+TGG 0.568815 5.3:+17275730 None:intergenic
TGGTTATGTTCAGTGCTACA+TGG 0.571493 5.3:-17272141 MS.gene028023:CDS
GGCCTCGGATGAACCGATTG+TGG 0.573991 5.3:-17275513 MS.gene028023:CDS
GAATCAGTTTGTTTGTATGG+TGG 0.575683 5.3:-17273004 MS.gene028023:CDS
GATATTGTCATTGGAACTCC+CGG 0.581051 5.3:-17272774 MS.gene028023:CDS
AGAAATACACGGCGGTGAAG+AGG 0.583314 5.3:-17275466 MS.gene028023:CDS
GCCTTATGCTCTCTCCTACG+AGG 0.583509 5.3:-17274239 MS.gene028023:CDS
TGGAAAGCAGTGTCTATAAG+TGG 0.585177 5.3:-17271565 MS.gene028023:CDS
GCACGTGATTGAATCGGAGA+AGG 0.586015 5.3:+17275386 None:intergenic
GATGAACCGATTGTGGTGAC+TGG 0.587028 5.3:-17275506 MS.gene028023:CDS
TCGTGATTTGATTGGAATTG+CGG 0.593562 5.3:-17275342 MS.gene028023:CDS
GCATCCGATCTGCTTCATCA+AGG 0.595521 5.3:+17272380 None:intergenic
AATATTTCAGGGACTTGCTG+GGG 0.596100 5.3:-17270734 MS.gene028023:intron
TGATTGGAATTGCGGCAACT+GGG 0.600555 5.3:-17275334 MS.gene028023:CDS
TGTGATGCTGGTAAATCTTG+TGG 0.600721 5.3:-17273031 MS.gene028023:CDS
AAGAGCAAGGGTTCTTCCAA+GGG 0.602731 5.3:-17274276 MS.gene028023:CDS
TGATGTCATGCAAATAGTTG+AGG 0.605250 5.3:-17271959 MS.gene028023:CDS
TATGAATAAGCGGAAGAGCA+AGG 0.607867 5.3:-17274289 MS.gene028023:CDS
GCTAAGTGATGAACTGCTAA+CGG 0.609098 5.3:+17272118 None:intergenic
GCTACTGATGTGGCTGCACG+AGG 0.611530 5.3:-17271014 MS.gene028023:CDS
GTACAAATGGGAAACCACAC+GGG 0.611553 5.3:-17271754 MS.gene028023:CDS
GTGGTGACTGGAAAGAATGC+CGG 0.612595 5.3:-17275494 MS.gene028023:CDS
AATGTGCTTGAGTGTTGTAA+GGG 0.615083 5.3:-17275419 MS.gene028023:CDS
GCAAGGGTTCTTCCAAGGGT+CGG 0.615294 5.3:-17274272 MS.gene028023:CDS
TTATGCATGTTATGAATAAG+CGG 0.617150 5.3:-17274299 MS.gene028023:CDS
GTGGAGAAAATGCTTCAACA+AGG 0.622499 5.3:-17271732 MS.gene028023:CDS
AGGTCCTTGATGAAGCAGAT+CGG 0.623442 5.3:-17272384 MS.gene028023:CDS
TGCTGGTAAATCTTGTGGTG+TGG 0.625650 5.3:-17273026 MS.gene028023:CDS
TGGAGAAAATGCTTCAACAA+GGG 0.625673 5.3:-17271731 MS.gene028023:intron
ACAGGTTGTTGTAGGCTCAG+AGG 0.629287 5.3:-17271998 MS.gene028023:intron
CACCACAATCGGTTCATCCG+AGG 0.630004 5.3:+17275511 None:intergenic
TGGGCAGATTGCTACTGATG+TGG 0.630709 5.3:-17271024 MS.gene028023:intron
GGAGAGAGCATAAGGCAAAG+AGG 0.632906 5.3:+17274246 None:intergenic
GCAGATCGGATGCTTGACAT+GGG 0.636956 5.3:-17272370 MS.gene028023:CDS
TGTTGAGCTAGCTCCCTCGT+AGG 0.646096 5.3:+17274225 None:intergenic
ATAGGAGTCCAAGCTTTATG+GGG 0.655015 5.3:-17270516 MS.gene028023:intron
ACCAGATCTTGAATACGACC+GGG 0.658494 5.3:+17272756 None:intergenic
CAAATGGGAAACCACACGGG+TGG 0.659561 5.3:-17271751 MS.gene028023:CDS
ATCACAGCATGAGCGCACAA+AGG 0.688375 5.3:-17271536 MS.gene028023:CDS
CAAATGTGTGAAGAATGTAT+GGG 0.699602 5.3:+17270881 None:intergenic
TGCCGGAGATGAGAAATACA+CGG 0.715333 5.3:-17275477 MS.gene028023:CDS
ATGTCTGACCAAGTATAGAG+CGG 0.717626 5.3:+17272332 None:intergenic
ATTATGTTCATAGAATTGGG+CGG 0.720125 5.3:-17270932 MS.gene028023:CDS
TCGGAGGAAAATTACAACGG+CGG 0.733343 5.3:-17275551 MS.gene028023:CDS
AAATCGGAGGAAAATTACAA+CGG 0.736965 5.3:-17275554 MS.gene028023:CDS
CGGAGATGAGAAATACACGG+CGG 0.831076 5.3:-17275474 MS.gene028023:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACTAAAATACA+AGG + chr5.3:17272380-17272399 None:intergenic 10.0%
!! AAAAAAAAACTAAAATACAA+GGG + chr5.3:17272379-17272398 None:intergenic 10.0%
!! AATATTAATCTTTAGTATTA+GGG - chr5.3:17271013-17271032 MS.gene028023:CDS 10.0%
!! AATTTAATTGTCTATAAAAT+AGG + chr5.3:17273371-17273390 None:intergenic 10.0%
!! ATAATATAATAATATATACC+TGG - chr5.3:17274530-17274549 MS.gene028023:intron 10.0%
!! TAATATTAATCTTTAGTATT+AGG - chr5.3:17271012-17271031 MS.gene028023:CDS 10.0%
!!! TTCAATGAATATATTTTATT+TGG - chr5.3:17273556-17273575 MS.gene028023:intron 10.0%
!! CTTATATATAACAGAAATAA+AGG + chr5.3:17275401-17275420 None:intergenic 15.0%
!!! AATGTTATTTTTTTAGACTT+TGG + chr5.3:17275736-17275755 None:intergenic 15.0%
!!! ACGTTTAATTTTTATTTGTT+TGG - chr5.3:17272075-17272094 MS.gene028023:intron 15.0%
!!! ATGAATATATTTTATTTGGT+TGG - chr5.3:17273560-17273579 MS.gene028023:intron 15.0%
!!! TGTAACTTTATTTTATCTTT+TGG + chr5.3:17271225-17271244 None:intergenic 15.0%
!!! TTATTTCTGTTATATATAAG+TGG - chr5.3:17275401-17275420 MS.gene028023:CDS 15.0%
!! AAAATAACAATTATCCAACA+TGG + chr5.3:17274852-17274871 None:intergenic 20.0%
!! AAAATAATATCCAAAGAGAA+AGG + chr5.3:17272172-17272191 None:intergenic 20.0%
!! AAGATTATGTTCATAGAATT+GGG - chr5.3:17275262-17275281 MS.gene028023:intron 20.0%
!! ATAACTTTCTGCTTTAATAT+AGG - chr5.3:17275663-17275682 MS.gene028023:CDS 20.0%
!! ATAAGTTAAATAATGTCTTC+AGG - chr5.3:17274606-17274625 MS.gene028023:intron 20.0%
!! ATGTGTTTGTATTATTGAAA+TGG - chr5.3:17270915-17270934 MS.gene028023:CDS 20.0%
!! TAAGTTAAAACAATGTAATG+AGG + chr5.3:17272810-17272829 None:intergenic 20.0%
!! TAAGTTAAATAATGTCTTCA+GGG - chr5.3:17274607-17274626 MS.gene028023:intron 20.0%
!! TAATATATTCAGAAGAGAAT+CGG + chr5.3:17275356-17275375 None:intergenic 20.0%
!! TAATTGTCTATAAAATAGGA+CGG + chr5.3:17273367-17273386 None:intergenic 20.0%
!! TATTATTGAAATGGTTGAAT+TGG - chr5.3:17270924-17270943 MS.gene028023:CDS 20.0%
!!! ACTTTTTTTTTCTTTCATAG+TGG - chr5.3:17272484-17272503 MS.gene028023:intron 20.0%
!!! ATCTTTTCTTTTTGTAACTA+GGG - chr5.3:17271847-17271866 MS.gene028023:intron 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - chr5.3:17271562-17271581 MS.gene028023:CDS 20.0%
!!! ATTTGTTTTCTCAATCTAAT+GGG - chr5.3:17275154-17275173 MS.gene028023:intron 20.0%
!!! TATCTTTTCTTTTTGTAACT+AGG - chr5.3:17271846-17271865 MS.gene028023:intron 20.0%
!!! TATTTGTTTTCTCAATCTAA+TGG - chr5.3:17275153-17275172 MS.gene028023:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - chr5.3:17271563-17271582 MS.gene028023:CDS 20.0%
!!! TTGTTTTCATAATCTATCTT+TGG - chr5.3:17271267-17271286 MS.gene028023:intron 20.0%
!!! TTTAAACAAAGGGTTAATTT+TGG - chr5.3:17272406-17272425 MS.gene028023:intron 20.0%
! AAATTCAGTAGAAATGCAAA+TGG + chr5.3:17273657-17273676 None:intergenic 25.0%
! AAGATATTTAAACTTGTGAC+AGG - chr5.3:17274181-17274200 MS.gene028023:intron 25.0%
! AAGTTAAATAATGTCTTCAG+GGG - chr5.3:17274608-17274627 MS.gene028023:intron 25.0%
! AGAAAAAAGCTCCATAAATA+TGG + chr5.3:17273342-17273361 None:intergenic 25.0%
! AGAAAACAATCAAAAGTTGA+TGG + chr5.3:17274815-17274834 None:intergenic 25.0%
! AGTGAAACAAAAAATAAGCT+GGG + chr5.3:17274004-17274023 None:intergenic 25.0%
! ATAAAAAACATCATCTTAGG+AGG + chr5.3:17274924-17274943 None:intergenic 25.0%
! ATAACAGAAATAAAGGACAA+AGG + chr5.3:17275394-17275413 None:intergenic 25.0%
! ATATTTAGAAATCCACACTT+AGG + chr5.3:17271829-17271848 None:intergenic 25.0%
! ATGAAGTTATTTATCCAAAC+AGG + chr5.3:17271173-17271192 None:intergenic 25.0%
! ATTCTTCACACATTTGAATA+AGG - chr5.3:17275323-17275342 MS.gene028023:intron 25.0%
! CCACGAACAAAAAAAATATT+TGG + chr5.3:17272615-17272634 None:intergenic 25.0%
! GAAGATTATGTTCATAGAAT+TGG - chr5.3:17275261-17275280 MS.gene028023:intron 25.0%
! GGAATGTTATAACCAAAATT+TGG - chr5.3:17272853-17272872 MS.gene028023:intron 25.0%
! GTAAAGCTATAACTTCAAAA+GGG + chr5.3:17274975-17274994 None:intergenic 25.0%
! TAAAATCTTGTATCTTTCTC+AGG - chr5.3:17274397-17274416 MS.gene028023:intron 25.0%
! TCAAATAAACCAATCCAAAT+AGG - chr5.3:17271398-17271417 MS.gene028023:intron 25.0%
! TGAAGTTATTTATCCAAACA+GGG + chr5.3:17271172-17271191 None:intergenic 25.0%
! TGGATAAAAAACATCATCTT+AGG + chr5.3:17274927-17274946 None:intergenic 25.0%
! TGTAAAGCTATAACTTCAAA+AGG + chr5.3:17274976-17274995 None:intergenic 25.0%
! TTATGCATGTTATGAATAAG+CGG - chr5.3:17271898-17271917 MS.gene028023:CDS 25.0%
!! AAATATCTGCAACCAAATTT+TGG + chr5.3:17272868-17272887 None:intergenic 25.0%
!! AATGAGTTGGAAATTGTTAA+GGG - chr5.3:17272290-17272309 MS.gene028023:intron 25.0%
!! ACAGCTACATTTTATCATTT+GGG + chr5.3:17273059-17273078 None:intergenic 25.0%
!! ATGAAGATACATACTTTTAC+AGG + chr5.3:17274127-17274146 None:intergenic 25.0%
!! GAAAACAATCAAAAGTTGAT+GGG + chr5.3:17274814-17274833 None:intergenic 25.0%
!! TGAAGATACATACTTTTACA+GGG + chr5.3:17274126-17274145 None:intergenic 25.0%
!! TTTGATAGTACCTGTAAATT+GGG - chr5.3:17272913-17272932 MS.gene028023:intron 25.0%
!!! AGTGGAAAATTGTTTTTGAT+TGG - chr5.3:17272250-17272269 MS.gene028023:intron 25.0%
!!! ATACAGTAGAATGTTATTTC+TGG - chr5.3:17272985-17273004 MS.gene028023:CDS 25.0%
!!! CCAAATATTTTTTTTGTTCG+TGG - chr5.3:17272612-17272631 MS.gene028023:intron 25.0%
!!! GTGGAAAATTGTTTTTGATT+GGG - chr5.3:17272251-17272270 MS.gene028023:intron 25.0%
!!! GTTCTTTTTGTTTTTCTTCT+TGG + chr5.3:17270518-17270537 None:intergenic 25.0%
!!! TACAAGATTTTAGCAAAAAG+AGG + chr5.3:17274389-17274408 None:intergenic 25.0%
!!! TTTTGATAGTACCTGTAAAT+TGG - chr5.3:17272912-17272931 MS.gene028023:intron 25.0%
!!! TTTTGGTTATAACATTCCAT+TGG + chr5.3:17272851-17272870 None:intergenic 25.0%
AAAAGTAACATCCTCTCTAT+TGG + chr5.3:17272961-17272980 None:intergenic 30.0%
AAAATTGGAAAGGGGAAAAT+GGG - chr5.3:17272446-17272465 MS.gene028023:intron 30.0%
AAAGTAACATCCTCTCTATT+GGG + chr5.3:17272960-17272979 None:intergenic 30.0%
AAATCGGAGGAAAATTACAA+CGG - chr5.3:17270643-17270662 MS.gene028023:intron 30.0%
AATTGTAGAACCCAATTTAC+AGG + chr5.3:17272926-17272945 None:intergenic 30.0%
AATTTCCCACTCATAATATC+AGG + chr5.3:17272318-17272337 None:intergenic 30.0%
ACAGAATACAAACCAACAAA+AGG + chr5.3:17273285-17273304 None:intergenic 30.0%
ACGACTATAAAATAGACATG+TGG + chr5.3:17273704-17273723 None:intergenic 30.0%
ACTGTCTTAAATTTCCAACT+GGG - chr5.3:17273010-17273029 MS.gene028023:CDS 30.0%
ATAAAACAGCATACCATCAA+AGG + chr5.3:17274716-17274735 None:intergenic 30.0%
ATACAAACCAACAAAAGGAA+AGG + chr5.3:17273280-17273299 None:intergenic 30.0%
ATCCTTTACTTCTATGAACT+TGG - chr5.3:17272146-17272165 MS.gene028023:CDS 30.0%
ATTATGTTCATAGAATTGGG+CGG - chr5.3:17275265-17275284 MS.gene028023:intron 30.0%
ATTCAAGATCTGGTTGAAAT+GGG - chr5.3:17273450-17273469 MS.gene028023:intron 30.0%
ATTCTGTCAGATACAAGTTA+TGG - chr5.3:17273298-17273317 MS.gene028023:intron 30.0%
CAAAACAGAATTCTGACATT+CGG + chr5.3:17273518-17273537 None:intergenic 30.0%
CAAATGTGTGAAGAATGTAT+GGG + chr5.3:17275319-17275338 None:intergenic 30.0%
CAATATCCTGGATGAAAAAA+AGG + chr5.3:17273410-17273429 None:intergenic 30.0%
CAGTGAAACAAAAAATAAGC+TGG + chr5.3:17274005-17274024 None:intergenic 30.0%
CATTTGGGTGAATCAATAAA+TGG + chr5.3:17273044-17273063 None:intergenic 30.0%
CTGGTTTACTTCCATATTTA+TGG - chr5.3:17273328-17273347 MS.gene028023:intron 30.0%
GAATGAATGGGAATATTTCA+GGG - chr5.3:17275452-17275471 MS.gene028023:CDS 30.0%
GCACTATCATTATTCAAGAA+TGG - chr5.3:17274683-17274702 MS.gene028023:intron 30.0%
GTAGGAATGAAAATTGGAAA+GGG - chr5.3:17272437-17272456 MS.gene028023:intron 30.0%
TACAAGTTATGGTTACATTC+TGG - chr5.3:17273309-17273328 MS.gene028023:intron 30.0%
TAGCAATATTGCATCATGTA+TGG - chr5.3:17272110-17272129 MS.gene028023:CDS 30.0%
TAGCGTATTAGCAAATGTAT+TGG + chr5.3:17273601-17273620 None:intergenic 30.0%
TAGGAATGAAAATTGGAAAG+GGG - chr5.3:17272438-17272457 MS.gene028023:intron 30.0%
TATGCTCAGAAGAAATTAGA+AGG + chr5.3:17273955-17273974 None:intergenic 30.0%
TATTCAAGATCTGGTTGAAA+TGG - chr5.3:17273449-17273468 MS.gene028023:intron 30.0%
TATTTGCATGACATCATGAT+TGG + chr5.3:17274234-17274253 None:intergenic 30.0%
TCAAATGTGTGAAGAATGTA+TGG + chr5.3:17275320-17275339 None:intergenic 30.0%
TGAAAACAGCATATGAACAT+GGG + chr5.3:17271424-17271443 None:intergenic 30.0%
TGAATGAATGGGAATATTTC+AGG - chr5.3:17275451-17275470 MS.gene028023:CDS 30.0%
TTCATAACATGCATAATAGC+TGG + chr5.3:17271894-17271913 None:intergenic 30.0%
TTCATGGAAAAAATCGAAAC+TGG + chr5.3:17275602-17275621 None:intergenic 30.0%
! AAAAGCAACCTTTTGTATCA+AGG + chr5.3:17272680-17272699 None:intergenic 30.0%
! AAAGCAACCTTTTGTATCAA+GGG + chr5.3:17272679-17272698 None:intergenic 30.0%
! AAGTGGATTTGAATTCATCT+AGG + chr5.3:17275007-17275026 None:intergenic 30.0%
! ACAAAAAATGGTAATGCACA+AGG + chr5.3:17273790-17273809 None:intergenic 30.0%
! ACCAGTTCATACATAGTTTT+TGG + chr5.3:17274779-17274798 None:intergenic 30.0%
! ATACATACTTTTACAGGGTT+GGG + chr5.3:17274121-17274140 None:intergenic 30.0%
! CACAGCTACATTTTATCATT+TGG + chr5.3:17273060-17273079 None:intergenic 30.0%
! GAAGAAAAAGCACAACAAAT+CGG - chr5.3:17270627-17270646 MS.gene028023:intron 30.0%
! GAATGAGTTGGAAATTGTTA+AGG - chr5.3:17272289-17272308 MS.gene028023:intron 30.0%
! TACTGAATTTTCTTTGATCC+TGG - chr5.3:17273667-17273686 MS.gene028023:intron 30.0%
! TTGTTTTCTCTGCAATACTT+TGG - chr5.3:17274826-17274845 MS.gene028023:intron 30.0%
!! ACATAATCTTCTAGAGTTAG+AGG + chr5.3:17275252-17275271 None:intergenic 30.0%
!! AGTTTTATATCTCTATACCG+AGG + chr5.3:17271589-17271608 None:intergenic 30.0%
!! ATTTTTCTAGTAAAGCAAGC+AGG + chr5.3:17274292-17274311 None:intergenic 30.0%
!! CTTACTTTTCTTCTCTGATT+CGG + chr5.3:17270605-17270624 None:intergenic 30.0%
!! GAAATAAGAACAGAAGTATC+TGG + chr5.3:17274947-17274966 None:intergenic 30.0%
!!! CTTTTTGTTTTTCTTCTTGG+AGG + chr5.3:17270515-17270534 None:intergenic 30.0%
!!! GAAACATCTAGCTTTTGATT+GGG - chr5.3:17272207-17272226 MS.gene028023:intron 30.0%
!!! GCATTACCATTTTTTGTTCT+AGG - chr5.3:17273793-17273812 MS.gene028023:intron 30.0%
!!! TGAAACATCTAGCTTTTGAT+TGG - chr5.3:17272206-17272225 MS.gene028023:intron 30.0%
!!! TTTTTTCTTTCATAGTGGCA+TGG - chr5.3:17272489-17272508 MS.gene028023:intron 30.0%
!!! TTTTTTTGTTCGTGGATAAC+TGG - chr5.3:17272620-17272639 MS.gene028023:intron 30.0%
AAAGTGACAATGACAATGAG+TGG + chr5.3:17275122-17275141 None:intergenic 35.0%
AACTTGTACAATCCTAAGTG+TGG - chr5.3:17271814-17271833 MS.gene028023:intron 35.0%
AAGATATCCTTGAGAGCTTA+TGG + chr5.3:17271455-17271474 None:intergenic 35.0%
AAGTTGACAACCGTAAAAAG+AGG + chr5.3:17274366-17274385 None:intergenic 35.0%
AGATTTAAGTGACCAATAGC+AGG + chr5.3:17272766-17272785 None:intergenic 35.0%
AGTTCATCTTAGTAGCTTCA+TGG + chr5.3:17275618-17275637 None:intergenic 35.0%
ATATAGGAGTCCAAGCTTTA+TGG - chr5.3:17275679-17275698 MS.gene028023:CDS 35.0%
ATCCTGGATGAAAAAAAGGA+AGG + chr5.3:17273406-17273425 None:intergenic 35.0%
ATGAACACAGAATCAAAGGT+AGG + chr5.3:17274336-17274355 None:intergenic 35.0%
CAAATCACTGCACTAAAATC+TGG - chr5.3:17273232-17273251 MS.gene028023:intron 35.0%
CAAGGACCTAGAACAAAAAA+TGG + chr5.3:17273802-17273821 None:intergenic 35.0%
CATGCAAATAGTTGAGGTAT+TGG - chr5.3:17274244-17274263 MS.gene028023:CDS 35.0%
CCAAATTTCAAAAGATCGTC+TGG + chr5.3:17275527-17275546 None:intergenic 35.0%
CCACAAAAGATACTTCTTGT+AGG + chr5.3:17273485-17273504 None:intergenic 35.0%
CCCAAAAGAAAACACGAAAA+CGG - chr5.3:17270556-17270575 MS.gene028023:intron 35.0%
CCTCTCTCATATGAATGAAT+GGG - chr5.3:17275440-17275459 MS.gene028023:CDS 35.0%
CGTAGGAATGAAAATTGGAA+AGG - chr5.3:17272436-17272455 MS.gene028023:intron 35.0%
CTATAACTTCAAAAGGGAGA+AGG + chr5.3:17274969-17274988 None:intergenic 35.0%
CTCAGAAGAAATTAGAAGGA+AGG + chr5.3:17273951-17273970 None:intergenic 35.0%
CTGAAAACAGCATATGAACA+TGG + chr5.3:17271425-17271444 None:intergenic 35.0%
CTGAATGAACACAGAATCAA+AGG + chr5.3:17274340-17274359 None:intergenic 35.0%
GAAAATTGGAAAGGGGAAAA+TGG - chr5.3:17272445-17272464 MS.gene028023:intron 35.0%
GACTGTCTTAAATTTCCAAC+TGG - chr5.3:17273009-17273028 MS.gene028023:CDS 35.0%
GCCAAAAACTATGTATGAAC+TGG - chr5.3:17274775-17274794 MS.gene028023:intron 35.0%
GGTTATAACATTCCATTGGA+GGG + chr5.3:17272847-17272866 None:intergenic 35.0%
GTATTAGGGTCTGTTTGAAT+TGG - chr5.3:17271027-17271046 MS.gene028023:intron 35.0%
TAAATAATGTCTTCAGGGGT+TGG - chr5.3:17274612-17274631 MS.gene028023:intron 35.0%
TCACTTAGCTCAGGAATTTA+TGG - chr5.3:17274093-17274112 MS.gene028023:intron 35.0%
TCCTCTCTCATATGAATGAA+TGG - chr5.3:17275439-17275458 MS.gene028023:CDS 35.0%
TCGTGATTTGATTGGAATTG+CGG - chr5.3:17270855-17270874 MS.gene028023:intron 35.0%
TCGTTATACGTGTTATAAGC+AGG + chr5.3:17273766-17273785 None:intergenic 35.0%
TGATGTCATGCAAATAGTTG+AGG - chr5.3:17274238-17274257 MS.gene028023:CDS 35.0%
TGCTTCGTAGGAATGAAAAT+TGG - chr5.3:17272431-17272450 MS.gene028023:intron 35.0%
TGGAGAAAATGCTTCAACAA+GGG - chr5.3:17274466-17274485 MS.gene028023:intron 35.0%
TGGCACACATGTTAAGAAAA+AGG - chr5.3:17275544-17275563 MS.gene028023:CDS 35.0%
TGGTTATAACATTCCATTGG+AGG + chr5.3:17272848-17272867 None:intergenic 35.0%
TTCATCCAGGATATTGTCAT+TGG - chr5.3:17273414-17273433 MS.gene028023:intron 35.0%
TTGATCACTACTTCAACATC+TGG + chr5.3:17275219-17275238 None:intergenic 35.0%
! AATGTGCTTGAGTGTTGTAA+GGG - chr5.3:17270778-17270797 MS.gene028023:intron 35.0%
! AGTCTGTCCATTGTTTGTTA+AGG + chr5.3:17275046-17275065 None:intergenic 35.0%
! AGTGATTTGTGGTTGTTTGT+TGG + chr5.3:17273221-17273240 None:intergenic 35.0%
! AGTTCTTCCTTTCCTTTTGT+TGG - chr5.3:17273270-17273289 MS.gene028023:intron 35.0%
! ATCAGCAATAACTTGTAACC+AGG + chr5.3:17274564-17274583 None:intergenic 35.0%
! ATTGTTTGTTAAGGACCAAG+GGG + chr5.3:17275037-17275056 None:intergenic 35.0%
! ATTTTCAACAGCTCGTCAAA+TGG - chr5.3:17274036-17274055 MS.gene028023:intron 35.0%
! CATTCAGTTGCCTCTTTTTA+CGG - chr5.3:17274353-17274372 MS.gene028023:intron 35.0%
! CATTGTTTGTTAAGGACCAA+GGG + chr5.3:17275038-17275057 None:intergenic 35.0%
! CCGTTTTCGTGTTTTCTTTT+GGG + chr5.3:17270559-17270578 None:intergenic 35.0%
! GAATCAGTTTGTTTGTATGG+TGG - chr5.3:17273193-17273212 MS.gene028023:intron 35.0%
! GAGTTCTGTGTTGTTGTTAA+GGG + chr5.3:17270488-17270507 None:intergenic 35.0%
! GATACATACTTTTACAGGGT+TGG + chr5.3:17274122-17274141 None:intergenic 35.0%
! GTGGAATCAGTTTGTTTGTA+TGG - chr5.3:17273190-17273209 MS.gene028023:intron 35.0%
! TATAGGAGTCCAAGCTTTAT+GGG - chr5.3:17275680-17275699 MS.gene028023:CDS 35.0%
! TGAGTTCTGTGTTGTTGTTA+AGG + chr5.3:17270489-17270508 None:intergenic 35.0%
! TTGTTGTTAAGGGTTTGTTC+TGG + chr5.3:17270478-17270497 None:intergenic 35.0%
! TTTTACACTCTCACAACAGT+TGG + chr5.3:17271695-17271714 None:intergenic 35.0%
!! ACCTGTTTCTATCTTGACAA+TGG - chr5.3:17272558-17272577 MS.gene028023:intron 35.0%
!! ATTTTATTTGGTTGGCTCAC+TGG - chr5.3:17273568-17273587 MS.gene028023:intron 35.0%
!! CCTGTTTCTATCTTGACAAT+GGG - chr5.3:17272559-17272578 MS.gene028023:intron 35.0%
!! GATTTTAGTGCAGTGATTTG+TGG + chr5.3:17273232-17273251 None:intergenic 35.0%
!! GCTTTTGATTGGGAAGAAAA+TGG - chr5.3:17272217-17272236 MS.gene028023:intron 35.0%
!! TTAATTTTGGTCTGCTTCGT+AGG - chr5.3:17272419-17272438 MS.gene028023:intron 35.0%
!! TTTTATTTGGTTGGCTCACT+GGG - chr5.3:17273569-17273588 MS.gene028023:intron 35.0%
!!! AGGCATACTTTTGAGATTTG+TGG + chr5.3:17274316-17274335 None:intergenic 35.0%
!!! ATACATAGTTTTTGGCTTCC+AGG + chr5.3:17274771-17274790 None:intergenic 35.0%
!!! ATCCACTTTTTTATTCCCCT+TGG - chr5.3:17275019-17275038 MS.gene028023:intron 35.0%
!!! CCAGACGATCTTTTGAAATT+TGG - chr5.3:17275524-17275543 MS.gene028023:CDS 35.0%
!!! CCTACAAGAAGTATCTTTTG+TGG - chr5.3:17273482-17273501 MS.gene028023:intron 35.0%
!!! TACATAGTTTTTGGCTTCCA+GGG + chr5.3:17274770-17274789 None:intergenic 35.0%
!!! TTCCTTCCTTTTTTTCATCC+AGG - chr5.3:17273401-17273420 MS.gene028023:intron 35.0%
AAATGGATCTAGTACCCAGT+TGG + chr5.3:17273027-17273046 None:intergenic 40.0%
AACATCCTCTCTATTGGGTT+GGG + chr5.3:17272955-17272974 None:intergenic 40.0%
AACCAGATCTTGAATACGAC+CGG + chr5.3:17273445-17273464 None:intergenic 40.0%
AACTTGTGACAGGTTGTTGT+AGG - chr5.3:17274191-17274210 MS.gene028023:intron 40.0%
ACGCTAGTGTTGCAATATAC+TGG - chr5.3:17273615-17273634 MS.gene028023:intron 40.0%
AGGGATCCTGATATTATGAG+TGG - chr5.3:17272309-17272328 MS.gene028023:intron 40.0%
ATACTTGGTCAGACATGTTC+TGG - chr5.3:17273872-17273891 MS.gene028023:intron 40.0%
ATGAATAAGCGGAAGAGCAA+GGG - chr5.3:17271909-17271928 MS.gene028023:CDS 40.0%
ATGTCTGACCAAGTATAGAG+CGG + chr5.3:17273868-17273887 None:intergenic 40.0%
CAAATAGTCCGCTCTATACT+TGG - chr5.3:17273857-17273876 MS.gene028023:intron 40.0%
CATATGAACATGGGCCTATT+TGG + chr5.3:17271415-17271434 None:intergenic 40.0%
CCAAACAGGGCTATATCATA+TGG + chr5.3:17271159-17271178 None:intergenic 40.0%
CCATATGATATAGCCCTGTT+TGG - chr5.3:17271156-17271175 MS.gene028023:intron 40.0%
CCCATTCATTCATATGAGAG+AGG + chr5.3:17275443-17275462 None:intergenic 40.0%
CCCATTGTCAAGATAGAAAC+AGG + chr5.3:17272562-17272581 None:intergenic 40.0%
CCTTGGTCCTTAACAAACAA+TGG - chr5.3:17275036-17275055 MS.gene028023:intron 40.0%
CTTATGTCCATAAGCTCTCA+AGG - chr5.3:17271445-17271464 MS.gene028023:intron 40.0%
CTTTCTCAGGAATCGAGTAT+TGG - chr5.3:17274410-17274429 MS.gene028023:intron 40.0%
GACCAAGGGGAATAAAAAAG+TGG + chr5.3:17275024-17275043 None:intergenic 40.0%
GAGTTCCAATGACAATATCC+TGG + chr5.3:17273422-17273441 None:intergenic 40.0%
GATATTGTCATTGGAACTCC+CGG - chr5.3:17273423-17273442 MS.gene028023:intron 40.0%
GATTGGGAAGAAAATGGCAA+GGG - chr5.3:17272223-17272242 MS.gene028023:intron 40.0%
GCGAGCACAAGTATGATAAA+AGG + chr5.3:17272742-17272761 None:intergenic 40.0%
GCTAAGTGATGAACTGCTAA+CGG + chr5.3:17274082-17274101 None:intergenic 40.0%
GGCCAAGTTCATAGAAGTAA+AGG + chr5.3:17272151-17272170 None:intergenic 40.0%
GGGATCCTGATATTATGAGT+GGG - chr5.3:17272310-17272329 MS.gene028023:intron 40.0%
GTGGAGAAAATGCTTCAACA+AGG - chr5.3:17274465-17274484 MS.gene028023:intron 40.0%
TAACATCCTCTCTATTGGGT+TGG + chr5.3:17272956-17272975 None:intergenic 40.0%
TAAGCACTTGTGAGACTGTT+TGG - chr5.3:17271075-17271094 MS.gene028023:intron 40.0%
TAGCCTTCCCTTGATACAAA+AGG - chr5.3:17272669-17272688 MS.gene028023:intron 40.0%
TATGAATAAGCGGAAGAGCA+AGG - chr5.3:17271908-17271927 MS.gene028023:CDS 40.0%
TCACGACCATCCAACAAAAA+CGG + chr5.3:17270841-17270860 None:intergenic 40.0%
TCAGATGTATTGTGTGATGC+TGG - chr5.3:17273154-17273173 MS.gene028023:intron 40.0%
TGAAGAGGTTTGAGGATTCA+GGG - chr5.3:17270746-17270765 MS.gene028023:intron 40.0%
TGATTGGGAAACAAACGACA+CGG - chr5.3:17272266-17272285 MS.gene028023:intron 40.0%
TGATTGGGAAGAAAATGGCA+AGG - chr5.3:17272222-17272241 MS.gene028023:intron 40.0%
TGGAAAGCAGTGTCTATAAG+TGG - chr5.3:17274632-17274651 MS.gene028023:intron 40.0%
TGGACAGACTAGTGACTATT+AGG - chr5.3:17275056-17275075 MS.gene028023:intron 40.0%
TGGTTATGTTCAGTGCTACA+TGG - chr5.3:17274056-17274075 MS.gene028023:intron 40.0%
TGTACAAATGGGAAACCACA+CGG - chr5.3:17274442-17274461 MS.gene028023:intron 40.0%
TGTGATGCTGGTAAATCTTG+TGG - chr5.3:17273166-17273185 MS.gene028023:intron 40.0%
TGTTTATCCAAATAGGGCCT+CGG - chr5.3:17271569-17271588 MS.gene028023:CDS 40.0%
TTCTTTCCAGTCACCACAAT+CGG + chr5.3:17270700-17270719 None:intergenic 40.0%
TTGGATGGTCGTGATTTGAT+TGG - chr5.3:17270847-17270866 MS.gene028023:intron 40.0%
! ATAGGAGTCCAAGCTTTATG+GGG - chr5.3:17275681-17275700 MS.gene028023:CDS 40.0%
! ATGAACTTGGCCTTTCTCTT+TGG - chr5.3:17272159-17272178 MS.gene028023:intron 40.0%
! CAACCTTTTGTATCAAGGGA+AGG + chr5.3:17272675-17272694 None:intergenic 40.0%
! CCATTGTTTGTTAAGGACCA+AGG + chr5.3:17275039-17275058 None:intergenic 40.0%
! GAAAAAGCACAACAAATCGG+AGG - chr5.3:17270630-17270649 MS.gene028023:intron 40.0%
! GAATATTTCAGGGACTTGCT+GGG - chr5.3:17275462-17275481 MS.gene028023:CDS 40.0%
! GAATGTGCTTGAGTGTTGTA+AGG - chr5.3:17270777-17270796 MS.gene028023:intron 40.0%
! GTTAAGGGTTTGTTCTGGTT+CGG + chr5.3:17270473-17270492 None:intergenic 40.0%
!! AATATTTCAGGGACTTGCTG+GGG - chr5.3:17275463-17275482 MS.gene028023:CDS 40.0%
!! ATATACCTGGTGAAAGTACC+TGG - chr5.3:17274543-17274562 MS.gene028023:intron 40.0%
!! GCCGTTTTCGTGTTTTCTTT+TGG + chr5.3:17270560-17270579 None:intergenic 40.0%
!! GTCAGGTTAGTTTGGTACTT+TGG - chr5.3:17270885-17270904 MS.gene028023:CDS 40.0%
!! TTAGACTTTGGAGCATCAAC+AGG + chr5.3:17275724-17275743 None:intergenic 40.0%
!! TTCTGGTTCGGTGGATAAAA+CGG + chr5.3:17270461-17270480 None:intergenic 40.0%
AAGAGCAAGGGTTCTTCCAA+GGG - chr5.3:17271921-17271940 MS.gene028023:CDS 45.0%
ACCAGATCTTGAATACGACC+GGG + chr5.3:17273444-17273463 None:intergenic 45.0%
AGCAGTTCATCACTTAGCTC+AGG - chr5.3:17274084-17274103 MS.gene028023:intron 45.0%
AGGTCCTTGATGAAGCAGAT+CGG - chr5.3:17273813-17273832 MS.gene028023:intron 45.0%
AGTTATACCTCTCCCTCCAA+TGG - chr5.3:17272832-17272851 MS.gene028023:intron 45.0%
CAACACTCAAGCACATTCTC+AGG + chr5.3:17270775-17270794 None:intergenic 45.0%
CTGCAATACTTTGGCCATGT+TGG - chr5.3:17274835-17274854 MS.gene028023:intron 45.0%
GAAAATGGCAAGGGAATGAG+TGG - chr5.3:17272232-17272251 MS.gene028023:intron 45.0%
GAACATGGGCCTATTTGGAT+TGG + chr5.3:17271410-17271429 None:intergenic 45.0%
GAATGGAAGCTGTCCTTTGA+TGG - chr5.3:17274700-17274719 MS.gene028023:intron 45.0%
GATTGGGAAACAAACGACAC+GGG - chr5.3:17272267-17272286 MS.gene028023:intron 45.0%
GGAATATTTCAGGGACTTGC+TGG - chr5.3:17275461-17275480 MS.gene028023:CDS 45.0%
GTACAAATGGGAAACCACAC+GGG - chr5.3:17274443-17274462 MS.gene028023:intron 45.0%
GTGAAGAGGTTTGAGGATTC+AGG - chr5.3:17270745-17270764 MS.gene028023:intron 45.0%
TAACATTCCATTGGAGGGAG+AGG + chr5.3:17272842-17272861 None:intergenic 45.0%
TCGGAGGAAAATTACAACGG+CGG - chr5.3:17270646-17270665 MS.gene028023:intron 45.0%
TGATTGGAATTGCGGCAACT+GGG - chr5.3:17270863-17270882 MS.gene028023:intron 45.0%
TGCCGGAGATGAGAAATACA+CGG - chr5.3:17270720-17270739 MS.gene028023:CDS 45.0%
TGCTGGTAAATCTTGTGGTG+TGG - chr5.3:17273171-17273190 MS.gene028023:intron 45.0%
TGTAACCAGGTACTTTCACC+AGG + chr5.3:17274551-17274570 None:intergenic 45.0%
TTCGGCGTCGTATTGAAGAT+TGG + chr5.3:17270587-17270606 None:intergenic 45.0%
TTGATTGGAATTGCGGCAAC+TGG - chr5.3:17270862-17270881 MS.gene028023:intron 45.0%
! CTAGGGAAGACACTTGCTTT+TGG - chr5.3:17271864-17271883 MS.gene028023:intron 45.0%
!! ATCATATCAGTTTGCTGCCC+TGG - chr5.3:17274750-17274769 MS.gene028023:intron 45.0%
!!! GTGAACGTTTTGAGAGAAGC+AGG - chr5.3:17275491-17275510 MS.gene028023:CDS 45.0%
!! ATAAAACTAATAAATAAAAT+AGG + chr5.3:17272050-17272069 None:intergenic 5.0%
!! TATTATATTATCAAAAAAAA+TGG + chr5.3:17274521-17274540 None:intergenic 5.0%
!!! TTTTTTTTTTTTTAAACAAA+GGG - chr5.3:17272396-17272415 MS.gene028023:intron 5.0%
!!! TTTTTTTTTTTTTTAAACAA+AGG - chr5.3:17272395-17272414 MS.gene028023:intron 5.0%
ACAGGTTGTTGTAGGCTCAG+AGG - chr5.3:17274199-17274218 MS.gene028023:intron 50.0%
ACTCTCCCAACCCAATAGAG+AGG - chr5.3:17272947-17272966 MS.gene028023:intron 50.0%
ACTGGACGAGCTGGTAAGAA+AGG - chr5.3:17275288-17275307 MS.gene028023:intron 50.0%
AGAAATACACGGCGGTGAAG+AGG - chr5.3:17270731-17270750 MS.gene028023:intron 50.0%
AGCAGATCGGATGCTTGACA+TGG - chr5.3:17273826-17273845 MS.gene028023:intron 50.0%
ATCACAGCATGAGCGCACAA+AGG - chr5.3:17274661-17274680 MS.gene028023:intron 50.0%
CAAACGACACGGGAATGAGT+TGG - chr5.3:17272277-17272296 MS.gene028023:intron 50.0%
CATGTGGCAACTGTCTATCC+AGG + chr5.3:17273688-17273707 None:intergenic 50.0%
CCTTATGCTCTCTCCTACGA+GGG - chr5.3:17271959-17271978 MS.gene028023:CDS 50.0%
CGCCGTGTATTTCTCATCTC+CGG + chr5.3:17270725-17270744 None:intergenic 50.0%
CGGAGATGAGAAATACACGG+CGG - chr5.3:17270723-17270742 MS.gene028023:CDS 50.0%
CTCCGATTCAATCACGTGCT+TGG - chr5.3:17270815-17270834 MS.gene028023:intron 50.0%
CTCTATACCGAGGCCCTATT+TGG + chr5.3:17271579-17271598 None:intergenic 50.0%
GAAGAGCAAGGGTTCTTCCA+AGG - chr5.3:17271920-17271939 MS.gene028023:CDS 50.0%
GAAGTGAGCCCCATAAAGCT+TGG + chr5.3:17275692-17275711 None:intergenic 50.0%
GATGAACCGATTGTGGTGAC+TGG - chr5.3:17270691-17270710 MS.gene028023:CDS 50.0%
GCACGTGATTGAATCGGAGA+AGG + chr5.3:17270814-17270833 None:intergenic 50.0%
GCAGATCGGATGCTTGACAT+GGG - chr5.3:17273827-17273846 MS.gene028023:intron 50.0%
GCATCCGATCTGCTTCATCA+AGG + chr5.3:17273820-17273839 None:intergenic 50.0%
GCTTTATGGGGCTCACTTCA+AGG - chr5.3:17275693-17275712 MS.gene028023:CDS 50.0%
GGCCAAGCACGTGATTGAAT+CGG + chr5.3:17270820-17270839 None:intergenic 50.0%
GTGGTGACTGGAAAGAATGC+CGG - chr5.3:17270703-17270722 MS.gene028023:CDS 50.0%
GTTCATAGAATTGGGCGGAC+TGG - chr5.3:17275270-17275289 MS.gene028023:intron 50.0%
TCCCGGTCGTATTCAAGATC+TGG - chr5.3:17273440-17273459 MS.gene028023:intron 50.0%
TGGGCAGATTGCTACTGATG+TGG - chr5.3:17275173-17275192 MS.gene028023:intron 50.0%
TTACAACGGCGGTGATGTGT+TGG - chr5.3:17270657-17270676 MS.gene028023:CDS 50.0%
! AAGCATTTTCTCCACCCGTG+TGG + chr5.3:17274460-17274479 None:intergenic 50.0%
! GCAACTGGGTCAGGTTAGTT+TGG - chr5.3:17270877-17270896 MS.gene028023:CDS 50.0%
! GGAGAGAGCATAAGGCAAAG+AGG + chr5.3:17271954-17271973 None:intergenic 50.0%
!! AAGGGTTTGTTCTGGTTCGG+TGG + chr5.3:17270470-17270489 None:intergenic 50.0%
!! TGATGTGTTGGTTTCGGCCT+CGG - chr5.3:17270669-17270688 MS.gene028023:CDS 50.0%
!!! ACGTGCTTGGCCGTTTTTGT+TGG - chr5.3:17270828-17270847 MS.gene028023:intron 50.0%
!!! GCTTGGCCGTTTTTGTTGGA+TGG - chr5.3:17270832-17270851 MS.gene028023:intron 50.0%
CAAATGGGAAACCACACGGG+TGG - chr5.3:17274446-17274465 MS.gene028023:intron 55.0%
GCAAAGAGGATTCCGACCCT+TGG + chr5.3:17271940-17271959 None:intergenic 55.0%
GCAAGGGTTCTTCCAAGGGT+CGG - chr5.3:17271925-17271944 MS.gene028023:CDS 55.0%
GCCTTATGCTCTCTCCTACG+AGG - chr5.3:17271958-17271977 MS.gene028023:CDS 55.0%
TGATGTGGCTGCACGAGGAT+TGG - chr5.3:17275188-17275207 MS.gene028023:intron 55.0%
TGTTGAGCTAGCTCCCTCGT+AGG + chr5.3:17271975-17271994 None:intergenic 55.0%
! CACCACAATCGGTTCATCCG+AGG + chr5.3:17270689-17270708 None:intergenic 55.0%
! CCCTCGTAGGAGAGAGCATA+AGG + chr5.3:17271962-17271981 None:intergenic 55.0%
!! CGGCGGTGATGTGTTGGTTT+CGG - chr5.3:17270663-17270682 MS.gene028023:CDS 55.0%
CACGGCGGTGAAGAGGTTTG+AGG - chr5.3:17270738-17270757 MS.gene028023:intron 60.0%
CTTGTGCTCGCGCCTGCTAT+TGG - chr5.3:17272751-17272770 MS.gene028023:CDS 60.0%
GCTACTGATGTGGCTGCACG+AGG - chr5.3:17275183-17275202 MS.gene028023:intron 60.0%
GGAATTGCGGCAACTGGGTC+AGG - chr5.3:17270868-17270887 MS.gene028023:intron 60.0%
GGCCTCGGATGAACCGATTG+TGG - chr5.3:17270684-17270703 MS.gene028023:CDS 60.0%
!! ATTGGGCGGACTGGACGAGC+TGG - chr5.3:17275279-17275298 MS.gene028023:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 17270439 17275780 17270439 ID=MS.gene028023
chr5.3 mRNA 17270439 17275780 17270439 ID=MS.gene028023.t1;Parent=MS.gene028023
chr5.3 exon 17275330 17275780 17275330 ID=MS.gene028023.t1.exon1;Parent=MS.gene028023.t1
chr5.3 CDS 17275330 17275780 17275330 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17274224 17274351 17274224 ID=MS.gene028023.t1.exon2;Parent=MS.gene028023.t1
chr5.3 CDS 17274224 17274351 17274224 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17272961 17273068 17272961 ID=MS.gene028023.t1.exon3;Parent=MS.gene028023.t1
chr5.3 CDS 17272961 17273068 17272961 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17272716 17272796 17272716 ID=MS.gene028023.t1.exon4;Parent=MS.gene028023.t1
chr5.3 CDS 17272716 17272796 17272716 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17272326 17272404 17272326 ID=MS.gene028023.t1.exon5;Parent=MS.gene028023.t1
chr5.3 CDS 17272326 17272404 17272326 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17272087 17272172 17272087 ID=MS.gene028023.t1.exon6;Parent=MS.gene028023.t1
chr5.3 CDS 17272087 17272172 17272087 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17271892 17272016 17271892 ID=MS.gene028023.t1.exon7;Parent=MS.gene028023.t1
chr5.3 CDS 17271892 17272016 17271892 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17271732 17271800 17271732 ID=MS.gene028023.t1.exon8;Parent=MS.gene028023.t1
chr5.3 CDS 17271732 17271800 17271732 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17271498 17271591 17271498 ID=MS.gene028023.t1.exon9;Parent=MS.gene028023.t1
chr5.3 CDS 17271498 17271591 17271498 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17270875 17271039 17270875 ID=MS.gene028023.t1.exon10;Parent=MS.gene028023.t1
chr5.3 CDS 17270875 17271039 17270875 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17270654 17270746 17270654 ID=MS.gene028023.t1.exon11;Parent=MS.gene028023.t1
chr5.3 CDS 17270654 17270746 17270654 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
chr5.3 exon 17270439 17270534 17270439 ID=MS.gene028023.t1.exon12;Parent=MS.gene028023.t1
chr5.3 CDS 17270439 17270534 17270439 ID=cds.MS.gene028023.t1;Parent=MS.gene028023.t1
Gene Sequence

>MS.gene028023

ATGGCTCGCAAAAACGACGCCGTTTTATCCACCGAACCAGAACAAACCCTTAACAACAACACAGAACTCAAATCCTCCAAGAAGAAAAACAAAAAGAACAAACACGAAGAAAACACTCCCAAAAGAAAACACGAAAACGGCGAAACCAATCTTCAATACGACGCCGAATCAGAGAAGAAAAGTAAGAAGAAGAAAAAGCACAACAAATCGGAGGAAAATTACAACGGCGGTGATGTGTTGGTTTCGGCCTCGGATGAACCGATTGTGGTGACTGGAAAGAATGCCGGAGATGAGAAATACACGGCGGTGAAGAGGTTTGAGGATTCAGGGCTACCTGAGAATGTGCTTGAGTGTTGTAAGGGTTTTGAGAAACCTTCTCCGATTCAATCACGTGCTTGGCCGTTTTTGTTGGATGGTCGTGATTTGATTGGAATTGCGGCAACTGGGTCAGGTTAGTTTGGTACTTTGGTTTGTTCATGTGTTTGTATTATTGAAATGGTTGAATTGGATTATGATTTTTCTGTTATTTTACTGTTTAATATGTTTTAATTATAATTGATATTTGTTACTTTGTAATATTAATCTTTAGTATTAGGGTCTGTTTGAATTGGTTTATTTGAGCTTATTTTACTTACATAAGCACTTGTGAGACTGTTTGGAAGAATCTGTGAAAATATGAAGCTTTTTTATAGCACTTGTGAGCTTATTTACTTACAACCATATGATATAGCCCTGTTTGGATAAATAACTTCATTTGCAGTTTAAGTATAAGCTATTTCTGTACCAAAAGATAAAATAAAGTTACATTGTTGTTGTATAATTTATAACTTGTTTTCATAATCTATCTTTGGAGAGCTGATGAAAATAAGCTGAAAACAGCTAATGAACATGTCATAAGTTGTTTTCATAAATCATAATATTCTAAAACATTCTCAAAGTGTTTATGTTAGTAGATAAGCTCAAATAAACCAATCCAAATAGGCCCATGTTCATATGCTGTTTTCAGCTTATGTCCATAAGCTCTCAAGGATATCTTATGAAAACAGCTTATACGTAAGTAACTTTACTTTATTTTATCTTTTGTTATAAAGCTTATACTAAGTGTTAATGCTATAAGCTGCAAATTAAGTTGTTTATCCAAATAGGGCCTCGGTATAGAGATATAAAACTTTTTATATTGTCAATCTATCACAAAATCATCATTTGCATGAATTTTGAGTTAGATATGATTAAAGTCAAATATTTGTAGTGATCCAACTGTTGTGAGAGTGTAAAAAAGTCTTTATGCATTATGTTCATGTTATTGCTATTTAGTTTGCAATATGTTATTTAACATTATATAAAAATGCAACTATGCATTTGTAAAAATTGAATGAACTTGTACAATCCTAAGTGTGGATTTCTAAATATCTTTTCTTTTTGTAACTAGGGAAGACACTTGCTTTTGGAATACCAGCTATTATGCATGTTATGAATAAGCGGAAGAGCAAGGGTTCTTCCAAGGGTCGGAATCCTCTTTGCCTTATGCTCTCTCCTACGAGGGAGCTAGCTCAACAAGTATGTTTCTGTTAATACACTGAATTTTTTTTTTAAATTTCAATTTTAACTCCTATTTTATTTATTAGTTTTATCTTTCACGTTTAATTTTTATTTGTTTGGTGCAAAGTGAAATAGCAATATTGCATCATGTATGGCTAACTTTCGTTGATCCTTTACTTCTATGAACTTGGCCTTTCTCTTTGGATATTATTTTTTATTTTTTTTTGTTGAAACATCTAGCTTTTGATTGGGAAGAAAATGGCAAGGGAATGAGTGGAAAATTGTTTTTGATTGGGAAACAAACGACACGGGAATGAGTTGGAAATTGTTAAGGGATCCTGATATTATGAGTGGGAAATTACTAATTTTCATTTCTCTTCTATCTTTTGTGCTTTCGTCCCTTGTATTTTAGTTTTTTTTTTTTTTTTTTTAAACAAAGGGTTAATTTTGGTCTGCTTCGTAGGAATGAAAATTGGAAAGGGGAAAATGGGTGAGAGAATTTTCAAACTTTTTTTTTCTTTCATAGTGGCATGGTATTTTCACATGATATGTAAGTTTGATTCATTTCTCATCTGTTTTCACCTGTTTCTATCTTGACAATGGGTGAGATAATTTTGTGTTTTTTCTCAAGTTACCAAATATTTTTTTTGTTCGTGGATAACTGGTCTTTCAAATTCAGTAGTTATGTTAGTAGCCTTCCCTTGATACAAAAGGTTGCTTTTCTTTTGATAAGTATACATACAATACAATAGAACATCAAACCTTTTATCATACTTGTGCTCGCGCCTGCTATTGGTCACTTAAATCTTGTAAGAAGCTAATATTGATGCCTCATTACATTGTTTTAACTTACAAGTTATACCTCTCCCTCCAATGGAATGTTATAACCAAAATTTGGTTGCAGATATTTCAGAATGATCTTAATAGTTTTTCATTTTGATAGTACCTGTAAATTGGGTTCTACAATTAACTCTCCCAACCCAATAGAGAGGATGTTACTTTTTTTAATACAGTAGAATGTTATTTCTGGTGACTGTCTTAAATTTCCAACTGGGTACTAGATCCATTTATTGATTCACCCAAATGATAAAATGTAGCTGTGAGTATTAGATACTGTTGCTGCTTCACAAAATTATAAAATGTAGCTAATAGTTTTCTTTAATTCAACTACAGATATCAGATGTATTGTGTGATGCTGGTAAATCTTGTGGTGTGGAATCAGTTTGTTTGTATGGTGGAACCAACAAACAACCACAAATCACTGCACTAAAATCTGGCATTGTAAGTCATCAAGTTCTTCCTTTCCTTTTGTTGGTTTGTATTCTGTCAGATACAAGTTATGGTTACATTCTGGTTTACTTCCATATTTATGGAGCTTTTTTCTCTCCGTCCTATTTTATAGACAATTAAATTAGTTTGTTTCTTCCTTCCTTTTTTTCATCCAGGATATTGTCATTGGAACTCCCGGTCGTATTCAAGATCTGGTTGAAATGGGTATCTGTCGCCTACAAGAAGTATCTTTTGTGGTAAGCGATAACCGAATGTCAGAATTCTGTTTTGTTCTCTCTTAAGTCGTTATTCAATGAATATATTTTATTTGGTTGGCTCACTGGGTGACAGCCAATACATTTGCTAATACGCTAGTGTTGCAATATACTGGATCTTGAATTTATATACCATTTGCATTTCTACTGAATTTTCTTTGATCCTGGATAGACAGTTGCCACATGTCTATTTTATAGTCGTTTGTGCTACTTCAATTCTATTTTGTTTGTGAATTAGATGCCTGCTTATAACACGTATAACGAGCCTTGTGCATTACCATTTTTTGTTCTAGGTCCTTGATGAAGCAGATCGGATGCTTGACATGGGTTTTGAACAAATAGTCCGCTCTATACTTGGTCAGACATGTTCTGGTATGAGATGAGACATTTTTATCAGCTATTATCTCTTTTTTCTGTTTAATAACTCCTTCCTTCTAATTTCTTCTGAGCATAGATATATTTTGTTTCAACAATTATATCCCAGCTTATTTTTTGTTTCACTGAAGTGAGTGTAATTTTCAACAGCTCGTCAAATGGTTATGTTCAGTGCTACATGGCCGTTAGCAGTTCATCACTTAGCTCAGGAATTTATGGATCCCAACCCTGTAAAAGTATGTATCTTCATTTTCTAAAAGCTTTGAATTGTCTTTATATGTTGAAAGATATTTAAACTTGTGACAGGTTGTTGTAGGCTCAGAGGATTTATCTGCCAATCATGATGTCATGCAAATAGTTGAGGTATTGGATGAGCGTTTACGTGATAAGCGCCTGCTTGCTTTACTAGAAAAATACCACAAATCTCAAAAGTATGCCTACCTTTGATTCTGTGTTCATTCAGTTGCCTCTTTTTACGGTTGTCAACTTCCTCTTTTTGCTAAAATCTTGTATCTTTCTCAGGAATCGAGTATTGGTTTTTGTTTTGTACAAATGGGAAACCACACGGGTGGAGAAAATGCTTCAACAAGGGTACTATGCTACTATTGTTGCAATATGTTTCCATTTTTTTTGATAATATAATAATATATACCTGGTGAAAGTACCTGGTTACAAGTTATTGCTGATATAATTTTAATAGCTACTAATGATAAGTTAAATAATGTCTTCAGGGGTTGGAAAGCAGTGTCTATAAGTGGTGACAAATCACAGCATGAGCGCACAAAGGCACTATCATTATTCAAGAATGGAAGCTGTCCTTTGATGGTATGCTGTTTTATATTGTTATTGTTAAATCATATCAGTTTGCTGCCCTGGAAGCCAAAAACTATGTATGAACTGGTTTATTGTTGTGTCCCATCAACTTTTGATTGTTTTCTCTGCAATACTTTGGCCATGTTGGATAATTGTTATTTTCTTATTGTTTCGTTGCTATCTTTTTGCAATTAATTTCTCTACTAGTTATCCTCCTAAGATGATGTTTTTTATCCAGATACTTCTGTTCTTATTTCCTTCTCCCTTTTGAAGTTATAGCTTTACATTATTCATCCTAGATGAATTCAAATCCACTTTTTTATTCCCCTTGGTCCTTAACAAACAATGGACAGACTAGTGACTATTAGGATATTATTCTCATGATTTAACATAATCACTCAATTATTCTCCACTCATTGTCATTGTCACTTTATTTAGTTATTTATTTGTTTTCTCAATCTAATGGGCAGATTGCTACTGATGTGGCTGCACGAGGATTGGATATTCCAGATGTTGAAGTAGTGATCAACTTTAGTTTTCCTCTAACTCTAGAAGATTATGTTCATAGAATTGGGCGGACTGGACGAGCTGGTAAGAAAGGTGTTGCCCATACATTCTTCACACATTTGAATAAGGTAGAATACCGATTCTCTTCTGAATATATTATAGTTCTTTAGTTCTCCTTTGTCCTTTATTTCTGTTATATATAAGTGGTGTTTGTCTTCTTTATCCTCTCTCATATGAATGAATGGGAATATTTCAGGGACTTGCTGGGGAGCTTGTGAACGTTTTGAGAGAAGCAGGACAAGTTGTGCCAGACGATCTTTTGAAATTTGGCACACATGTTAAGAAAAAGGTTTGTTTTATTTTATCTACTTTTGTCTATGTACCAGTTTCGATTTTTTCCATGAAGCTACTAAGATGAACTTCTGTTTGTTTTTTACTGTTAAAATATAACTTTCTGCTTTAATATAGGAGTCCAAGCTTTATGGGGCTCACTTCAAGGAAATTCCTGTTGATGCTCCAAAGTCTAAAAAAATAACATTTGACAACTCTGATGATGAAGACTAA
Protein sequence

>MS.gene028023.t1

MARKNDAVLSTEPEQTLNNNTELKSSKKKNKKNKHEENTPKRKHENGETNLQYDAESEKKSKKKKKHNKSEENYNGGDVLVSASDEPIVVTGKNAGDEKYTAVKRFEDSGLPENVLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPLCLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTNKQPQITALKSGIDIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSILGQTCSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDKRLLALLEKYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTHLNKGLAGELVNVLREAGQVVPDDLLKFGTHVKKKESKLYGAHFKEIPVDAPKSKKITFDNSDDED