Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98436.t1 | XP_003612690.1 | 96.2 | 524 | 9 | 2 | 1 | 514 | 1 | 523 | 4.80E-244 | 853.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98436.t1 | Q9C551 | 75.6 | 438 | 96 | 2 | 88 | 514 | 100 | 537 | 4.4e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98436.t1 | G7K9I9 | 96.2 | 524 | 9 | 2 | 1 | 514 | 1 | 523 | 3.4e-244 | 853.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene98436 | 0.820173 | 7.89E-53 | -1.69E-46 |
| MS.gene050114 | MS.gene98436 | 0.827623 | 1.41E-54 | -1.69E-46 |
| MS.gene050277 | MS.gene98436 | 0.838318 | 3.09E-57 | -1.69E-46 |
| MS.gene050303 | MS.gene98436 | 0.841731 | 3.98E-58 | -1.69E-46 |
| MS.gene050320 | MS.gene98436 | 0.828527 | 8.56E-55 | -1.69E-46 |
| MS.gene051330 | MS.gene98436 | 0.852966 | 3.26E-61 | -1.69E-46 |
| MS.gene051451 | MS.gene98436 | 0.802986 | 4.32E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene98436 | 0.817258 | 3.62E-52 | -1.69E-46 |
| MS.gene051746 | MS.gene98436 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene98436 | 0.836004 | 1.21E-56 | -1.69E-46 |
| MS.gene05188 | MS.gene98436 | 0.848046 | 7.86E-60 | -1.69E-46 |
| MS.gene051903 | MS.gene98436 | 0.856073 | 4.12E-62 | -1.69E-46 |
| MS.gene051975 | MS.gene98436 | 0.835489 | 1.63E-56 | -1.69E-46 |
| MS.gene052286 | MS.gene98436 | 0.811697 | 6.15E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene98436 | 0.814309 | 1.65E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene98436 | 0.823953 | 1.05E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene98436 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene98436 | 0.82911 | 6.18E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene98436 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene98436 | 0.831287 | 1.82E-55 | -1.69E-46 |
| MS.gene053294 | MS.gene98436 | 0.80146 | 8.91E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene98436 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene053963 | MS.gene98436 | 0.80173 | 7.84E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene98436 | 0.815714 | 8.02E-52 | -1.69E-46 |
| MS.gene055424 | MS.gene98436 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene055603 | MS.gene98436 | 0.84521 | 4.68E-59 | -1.69E-46 |
| MS.gene055780 | MS.gene98436 | 0.800042 | 1.74E-48 | -1.69E-46 |
| MS.gene055808 | MS.gene98436 | 0.845264 | 4.53E-59 | -1.69E-46 |
| MS.gene056091 | MS.gene98436 | 0.867903 | 9.71E-66 | -1.69E-46 |
| MS.gene056403 | MS.gene98436 | 0.895213 | 1.19E-75 | -1.69E-46 |
| MS.gene056605 | MS.gene98436 | 0.907484 | 4.82E-81 | -1.69E-46 |
| MS.gene056631 | MS.gene98436 | 0.872148 | 3.97E-67 | -1.69E-46 |
| MS.gene056638 | MS.gene98436 | 0.814624 | 1.40E-51 | -1.69E-46 |
| MS.gene05689 | MS.gene98436 | 0.830107 | 3.54E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene98436 | 0.852246 | 5.23E-61 | -1.69E-46 |
| MS.gene057079 | MS.gene98436 | 0.811343 | 7.34E-51 | -1.69E-46 |
| MS.gene057094 | MS.gene98436 | 0.858111 | 1.03E-62 | -1.69E-46 |
| MS.gene05781 | MS.gene98436 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene98436 | 0.832247 | 1.05E-55 | -1.69E-46 |
| MS.gene058126 | MS.gene98436 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene058238 | MS.gene98436 | 0.843065 | 1.76E-58 | -1.69E-46 |
| MS.gene058908 | MS.gene98436 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene058911 | MS.gene98436 | 0.83302 | 6.78E-56 | -1.69E-46 |
| MS.gene05953 | MS.gene98436 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene98436 | 0.800638 | 1.31E-48 | -1.69E-46 |
| MS.gene059830 | MS.gene98436 | 0.827402 | 1.60E-54 | -1.69E-46 |
| MS.gene059935 | MS.gene98436 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene98436 | 0.876184 | 1.71E-68 | -1.69E-46 |
| MS.gene06011 | MS.gene98436 | 0.860511 | 1.96E-63 | -1.69E-46 |
| MS.gene060297 | MS.gene98436 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene98436 | 0.811863 | 5.66E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene98436 | 0.826751 | 2.28E-54 | -1.69E-46 |
| MS.gene060586 | MS.gene98436 | 0.85793 | 1.17E-62 | -1.69E-46 |
| MS.gene060763 | MS.gene98436 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene060830 | MS.gene98436 | 0.87438 | 7.06E-68 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98436.t1 | MTR_5g027840 | 94.466 | 524 | 18 | 2 | 1 | 514 | 1 | 523 | 0.0 | 1011 |
| MS.gene98436.t1 | MTR_2g100230 | 44.737 | 456 | 224 | 6 | 33 | 477 | 36 | 474 | 3.84e-123 | 370 |
| MS.gene98436.t1 | MTR_4g105100 | 46.684 | 377 | 187 | 4 | 103 | 469 | 200 | 572 | 1.64e-112 | 347 |
| MS.gene98436.t1 | MTR_6g005550 | 42.821 | 397 | 206 | 8 | 88 | 473 | 152 | 538 | 1.09e-99 | 316 |
| MS.gene98436.t1 | MTR_2g032630 | 41.772 | 395 | 213 | 7 | 95 | 478 | 486 | 874 | 8.57e-92 | 304 |
| MS.gene98436.t1 | MTR_7g109720 | 42.327 | 404 | 216 | 7 | 95 | 486 | 222 | 620 | 4.11e-90 | 292 |
| MS.gene98436.t1 | MTR_3g083690 | 40.326 | 429 | 231 | 8 | 71 | 478 | 115 | 539 | 3.71e-86 | 278 |
| MS.gene98436.t1 | MTR_1g054630 | 38.826 | 443 | 246 | 8 | 72 | 492 | 125 | 564 | 5.91e-85 | 275 |
| MS.gene98436.t1 | MTR_4g114120 | 36.893 | 515 | 278 | 11 | 3 | 476 | 26 | 534 | 6.83e-85 | 276 |
| MS.gene98436.t1 | MTR_4g105100 | 43.865 | 326 | 169 | 4 | 103 | 418 | 200 | 521 | 1.97e-82 | 265 |
| MS.gene98436.t1 | MTR_2g007000 | 39.487 | 390 | 206 | 6 | 103 | 473 | 502 | 880 | 2.10e-80 | 272 |
| MS.gene98436.t1 | MTR_3g467550 | 39.370 | 381 | 209 | 7 | 103 | 465 | 115 | 491 | 6.96e-79 | 257 |
| MS.gene98436.t1 | MTR_3g467550 | 40.833 | 360 | 193 | 6 | 122 | 465 | 105 | 460 | 8.17e-79 | 256 |
| MS.gene98436.t1 | MTR_1g095810 | 37.468 | 395 | 226 | 8 | 96 | 473 | 136 | 526 | 2.77e-75 | 248 |
| MS.gene98436.t1 | MTR_4g134170 | 37.121 | 396 | 217 | 6 | 108 | 475 | 290 | 681 | 3.34e-74 | 248 |
| MS.gene98436.t1 | MTR_1g026830 | 36.735 | 392 | 227 | 8 | 96 | 470 | 138 | 525 | 2.86e-73 | 243 |
| MS.gene98436.t1 | MTR_6g005320 | 36.160 | 401 | 222 | 7 | 103 | 475 | 247 | 641 | 3.30e-72 | 242 |
| MS.gene98436.t1 | MTR_3g449250 | 41.317 | 334 | 179 | 5 | 120 | 443 | 107 | 433 | 8.20e-72 | 239 |
| MS.gene98436.t1 | MTR_3g449250 | 41.317 | 334 | 179 | 5 | 120 | 443 | 107 | 433 | 3.65e-71 | 237 |
| MS.gene98436.t1 | MTR_5g090120 | 39.155 | 355 | 191 | 9 | 110 | 449 | 86 | 430 | 6.48e-71 | 237 |
| MS.gene98436.t1 | MTR_7g056830 | 38.567 | 363 | 193 | 9 | 97 | 443 | 2 | 350 | 1.11e-64 | 216 |
| MS.gene98436.t1 | MTR_6g082080 | 38.567 | 363 | 193 | 9 | 97 | 443 | 2 | 350 | 1.39e-64 | 216 |
| MS.gene98436.t1 | MTR_3g467550 | 38.576 | 337 | 185 | 7 | 103 | 421 | 115 | 447 | 5.45e-63 | 213 |
| MS.gene98436.t1 | MTR_4g079320 | 36.158 | 354 | 208 | 8 | 106 | 448 | 20 | 366 | 2.50e-57 | 204 |
| MS.gene98436.t1 | MTR_6g056080 | 37.183 | 355 | 198 | 7 | 127 | 466 | 127 | 471 | 2.90e-57 | 202 |
| MS.gene98436.t1 | MTR_3g049990 | 32.500 | 400 | 243 | 8 | 106 | 487 | 153 | 543 | 5.65e-57 | 202 |
| MS.gene98436.t1 | MTR_1g102410 | 36.769 | 359 | 190 | 7 | 120 | 447 | 61 | 413 | 7.39e-57 | 200 |
| MS.gene98436.t1 | MTR_2g041140 | 32.166 | 457 | 265 | 13 | 53 | 487 | 100 | 533 | 5.21e-56 | 200 |
| MS.gene98436.t1 | MTR_7g076800 | 31.633 | 392 | 252 | 6 | 65 | 449 | 101 | 483 | 6.96e-56 | 195 |
| MS.gene98436.t1 | MTR_7g076820 | 32.791 | 369 | 225 | 8 | 95 | 449 | 133 | 492 | 8.59e-56 | 195 |
| MS.gene98436.t1 | MTR_7g076830 | 33.056 | 360 | 225 | 6 | 98 | 449 | 134 | 485 | 9.58e-56 | 195 |
| MS.gene98436.t1 | MTR_2g039960 | 33.333 | 381 | 228 | 8 | 97 | 464 | 36 | 403 | 3.97e-53 | 185 |
| MS.gene98436.t1 | MTR_2g066050 | 33.163 | 392 | 233 | 8 | 94 | 469 | 44 | 422 | 4.11e-53 | 187 |
| MS.gene98436.t1 | MTR_4g125970 | 32.642 | 386 | 233 | 8 | 96 | 464 | 28 | 403 | 2.39e-52 | 183 |
| MS.gene98436.t1 | MTR_6g033070 | 32.376 | 383 | 245 | 6 | 103 | 474 | 138 | 517 | 6.22e-52 | 185 |
| MS.gene98436.t1 | MTR_4g125970 | 32.642 | 386 | 233 | 8 | 96 | 464 | 45 | 420 | 7.25e-52 | 182 |
| MS.gene98436.t1 | MTR_2g438110 | 31.006 | 358 | 229 | 4 | 98 | 446 | 27 | 375 | 2.68e-51 | 180 |
| MS.gene98436.t1 | MTR_8g027775 | 31.429 | 455 | 260 | 13 | 24 | 441 | 18 | 457 | 4.09e-51 | 183 |
| MS.gene98436.t1 | MTR_8g018400 | 32.970 | 367 | 222 | 7 | 96 | 448 | 28 | 384 | 6.77e-51 | 179 |
| MS.gene98436.t1 | MTR_2g099620 | 32.970 | 367 | 222 | 7 | 96 | 448 | 12 | 368 | 1.05e-50 | 178 |
| MS.gene98436.t1 | MTR_2g099620 | 32.970 | 367 | 222 | 7 | 96 | 448 | 28 | 384 | 1.35e-50 | 178 |
| MS.gene98436.t1 | MTR_8g027780 | 31.042 | 451 | 265 | 13 | 24 | 441 | 24 | 461 | 3.38e-49 | 178 |
| MS.gene98436.t1 | MTR_6g039840 | 32.812 | 384 | 236 | 9 | 102 | 464 | 107 | 489 | 7.07e-48 | 176 |
| MS.gene98436.t1 | MTR_3g071620 | 32.713 | 376 | 215 | 10 | 105 | 447 | 14 | 384 | 2.69e-47 | 173 |
| MS.gene98436.t1 | MTR_8g027770 | 32.836 | 402 | 229 | 12 | 68 | 441 | 168 | 556 | 1.14e-45 | 170 |
| MS.gene98436.t1 | MTR_7g100820 | 31.856 | 361 | 222 | 8 | 121 | 470 | 152 | 499 | 4.39e-44 | 165 |
| MS.gene98436.t1 | MTR_2g055850 | 32.044 | 362 | 223 | 9 | 102 | 447 | 88 | 442 | 5.37e-41 | 155 |
| MS.gene98436.t1 | MTR_8g097000 | 30.047 | 426 | 249 | 12 | 41 | 441 | 242 | 643 | 1.06e-40 | 156 |
| MS.gene98436.t1 | MTR_7g057250 | 29.280 | 403 | 207 | 9 | 121 | 448 | 181 | 580 | 1.15e-40 | 156 |
| MS.gene98436.t1 | MTR_8g027780 | 29.535 | 430 | 257 | 13 | 24 | 420 | 24 | 440 | 5.31e-40 | 150 |
| MS.gene98436.t1 | MTR_4g112340 | 33.030 | 330 | 200 | 7 | 121 | 436 | 115 | 437 | 1.27e-39 | 152 |
| MS.gene98436.t1 | MTR_1g012420 | 31.977 | 344 | 203 | 8 | 121 | 448 | 65 | 393 | 2.10e-39 | 148 |
| MS.gene98436.t1 | MTR_3g107420 | 32.267 | 344 | 202 | 8 | 121 | 448 | 65 | 393 | 2.92e-39 | 148 |
| MS.gene98436.t1 | MTR_1g061970 | 30.789 | 393 | 217 | 14 | 90 | 441 | 65 | 443 | 6.42e-39 | 148 |
| MS.gene98436.t1 | MTR_2g063080 | 30.637 | 408 | 216 | 11 | 102 | 446 | 106 | 509 | 2.48e-38 | 147 |
| MS.gene98436.t1 | MTR_4g010565 | 31.778 | 343 | 205 | 7 | 121 | 448 | 142 | 470 | 4.10e-38 | 146 |
| MS.gene98436.t1 | MTR_6g039840 | 32.792 | 308 | 188 | 7 | 175 | 464 | 7 | 313 | 1.47e-37 | 145 |
| MS.gene98436.t1 | MTR_0915s0010 | 29.825 | 285 | 188 | 4 | 120 | 400 | 6 | 282 | 6.23e-37 | 138 |
| MS.gene98436.t1 | MTR_4g068990 | 31.781 | 365 | 221 | 9 | 99 | 441 | 62 | 420 | 1.01e-35 | 142 |
| MS.gene98436.t1 | MTR_5g092560 | 32.229 | 332 | 208 | 6 | 128 | 447 | 101 | 427 | 2.66e-34 | 137 |
| MS.gene98436.t1 | MTR_3g118120 | 26.882 | 465 | 291 | 17 | 23 | 446 | 50 | 506 | 4.23e-34 | 135 |
| MS.gene98436.t1 | MTR_4g049910 | 29.274 | 427 | 242 | 12 | 94 | 491 | 44 | 439 | 9.96e-34 | 133 |
| MS.gene98436.t1 | MTR_1g083130 | 27.889 | 398 | 230 | 9 | 104 | 448 | 25 | 418 | 1.29e-31 | 129 |
| MS.gene98436.t1 | MTR_5g069330 | 27.649 | 387 | 241 | 10 | 103 | 470 | 5 | 371 | 3.97e-30 | 122 |
| MS.gene98436.t1 | MTR_5g069330 | 27.649 | 387 | 241 | 10 | 103 | 470 | 1 | 367 | 4.79e-30 | 122 |
| MS.gene98436.t1 | MTR_4g077370 | 35.577 | 208 | 110 | 6 | 94 | 292 | 242 | 434 | 3.78e-24 | 105 |
| MS.gene98436.t1 | MTR_4g077370 | 33.679 | 193 | 98 | 5 | 106 | 292 | 3 | 171 | 1.52e-18 | 88.6 |
| MS.gene98436.t1 | MTR_4g131750 | 27.968 | 379 | 214 | 13 | 102 | 436 | 79 | 442 | 5.17e-24 | 105 |
| MS.gene98436.t1 | MTR_1g022305 | 26.289 | 388 | 200 | 13 | 103 | 468 | 1 | 324 | 9.71e-24 | 104 |
| MS.gene98436.t1 | MTR_4g112320 | 30.769 | 234 | 149 | 4 | 214 | 436 | 24 | 255 | 1.87e-23 | 102 |
| MS.gene98436.t1 | MTR_1g046570 | 26.005 | 373 | 221 | 10 | 120 | 448 | 8 | 369 | 1.39e-22 | 100 |
| MS.gene98436.t1 | MTR_4g059460 | 31.621 | 253 | 141 | 8 | 92 | 318 | 29 | 275 | 1.88e-22 | 101 |
| MS.gene98436.t1 | MTR_4g059460 | 39.506 | 81 | 49 | 0 | 367 | 447 | 385 | 465 | 1.63e-13 | 73.6 |
| MS.gene98436.t1 | MTR_4g459350 | 33.679 | 193 | 119 | 5 | 92 | 277 | 26 | 216 | 2.74e-22 | 97.1 |
| MS.gene98436.t1 | MTR_8g018370 | 27.914 | 326 | 190 | 9 | 134 | 448 | 4 | 295 | 6.80e-22 | 97.1 |
| MS.gene98436.t1 | MTR_2g043360 | 32.420 | 219 | 121 | 6 | 121 | 318 | 60 | 272 | 1.11e-21 | 99.0 |
| MS.gene98436.t1 | MTR_2g043360 | 39.506 | 81 | 49 | 0 | 367 | 447 | 382 | 462 | 1.47e-13 | 73.6 |
| MS.gene98436.t1 | MTR_8g032230 | 36.735 | 147 | 84 | 3 | 97 | 241 | 2 | 141 | 8.03e-20 | 87.0 |
| MS.gene98436.t1 | MTR_8g042690 | 25.000 | 336 | 227 | 9 | 128 | 447 | 43 | 369 | 1.28e-19 | 92.0 |
| MS.gene98436.t1 | MTR_4g068990 | 31.500 | 200 | 124 | 6 | 253 | 441 | 12 | 209 | 1.49e-16 | 82.8 |
| MS.gene98436.t1 | MTR_5g092560 | 29.952 | 207 | 133 | 4 | 252 | 447 | 11 | 216 | 2.13e-16 | 82.4 |
| MS.gene98436.t1 | MTR_8g080160 | 24.242 | 396 | 251 | 9 | 69 | 447 | 233 | 596 | 7.15e-16 | 81.3 |
| MS.gene98436.t1 | MTR_1g050730 | 24.148 | 352 | 240 | 13 | 139 | 473 | 176 | 517 | 1.87e-14 | 76.3 |
| MS.gene98436.t1 | MTR_3g107420 | 32.990 | 194 | 107 | 6 | 121 | 305 | 65 | 244 | 5.75e-14 | 73.2 |
| MS.gene98436.t1 | MTR_2g043360 | 39.506 | 81 | 49 | 0 | 367 | 447 | 264 | 344 | 1.33e-13 | 73.6 |
| MS.gene98436.t1 | MTR_8g062720 | 34.400 | 125 | 77 | 2 | 344 | 468 | 436 | 555 | 3.06e-13 | 72.8 |
| MS.gene98436.t1 | MTR_1g023070 | 33.333 | 132 | 61 | 5 | 367 | 495 | 27 | 134 | 7.98e-13 | 67.4 |
| MS.gene98436.t1 | MTR_1g023070 | 33.333 | 132 | 61 | 5 | 367 | 495 | 27 | 134 | 8.45e-13 | 67.8 |
| MS.gene98436.t1 | MTR_0427s0010 | 38.095 | 105 | 51 | 1 | 351 | 441 | 73 | 177 | 2.46e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98436.t1 | AT1G31970 | 75.571 | 438 | 96 | 2 | 88 | 514 | 100 | 537 | 0.0 | 690 |
| MS.gene98436.t1 | AT5G63120 | 47.291 | 406 | 196 | 6 | 78 | 473 | 143 | 540 | 1.58e-122 | 371 |
| MS.gene98436.t1 | AT1G55150 | 43.601 | 461 | 229 | 6 | 27 | 477 | 39 | 478 | 2.05e-120 | 363 |
| MS.gene98436.t1 | AT1G55150 | 43.601 | 461 | 229 | 6 | 27 | 477 | 64 | 503 | 1.11e-119 | 362 |
| MS.gene98436.t1 | AT5G14610 | 43.117 | 385 | 202 | 7 | 106 | 479 | 163 | 541 | 8.05e-100 | 314 |
| MS.gene98436.t1 | AT5G14610 | 43.117 | 385 | 202 | 7 | 106 | 479 | 163 | 541 | 8.71e-100 | 314 |
| MS.gene98436.t1 | AT5G14610 | 43.117 | 385 | 202 | 7 | 106 | 479 | 171 | 549 | 9.54e-100 | 314 |
| MS.gene98436.t1 | AT5G14610 | 43.200 | 375 | 198 | 6 | 114 | 479 | 42 | 410 | 1.39e-97 | 305 |
| MS.gene98436.t1 | AT5G14610 | 43.200 | 375 | 198 | 6 | 114 | 479 | 42 | 410 | 1.39e-97 | 305 |
| MS.gene98436.t1 | AT3G01540 | 42.078 | 385 | 206 | 7 | 106 | 479 | 160 | 538 | 3.29e-97 | 307 |
| MS.gene98436.t1 | AT3G01540 | 42.078 | 385 | 206 | 7 | 106 | 479 | 160 | 538 | 3.29e-97 | 307 |
| MS.gene98436.t1 | AT3G01540 | 42.078 | 385 | 206 | 7 | 106 | 479 | 160 | 538 | 3.29e-97 | 307 |
| MS.gene98436.t1 | AT3G01540 | 42.078 | 385 | 206 | 7 | 106 | 479 | 160 | 538 | 3.76e-97 | 306 |
| MS.gene98436.t1 | AT5G14610 | 43.008 | 379 | 200 | 7 | 111 | 479 | 237 | 609 | 2.06e-95 | 305 |
| MS.gene98436.t1 | AT3G06480 | 43.467 | 398 | 202 | 8 | 88 | 473 | 423 | 809 | 1.17e-93 | 308 |
| MS.gene98436.t1 | AT3G58570 | 41.055 | 436 | 224 | 10 | 73 | 478 | 108 | 540 | 1.02e-89 | 288 |
| MS.gene98436.t1 | AT2G42520 | 39.374 | 447 | 238 | 10 | 62 | 478 | 110 | 553 | 3.71e-89 | 286 |
| MS.gene98436.t1 | AT2G42520 | 39.374 | 447 | 238 | 10 | 62 | 478 | 110 | 553 | 3.71e-89 | 286 |
| MS.gene98436.t1 | AT2G42520 | 39.374 | 447 | 238 | 10 | 62 | 478 | 110 | 553 | 3.71e-89 | 286 |
| MS.gene98436.t1 | AT5G63120 | 43.824 | 340 | 173 | 6 | 78 | 407 | 143 | 474 | 2.55e-88 | 280 |
| MS.gene98436.t1 | AT5G63120 | 43.824 | 340 | 173 | 6 | 78 | 407 | 143 | 474 | 3.33e-88 | 279 |
| MS.gene98436.t1 | AT5G63120 | 43.824 | 340 | 173 | 6 | 78 | 407 | 143 | 474 | 3.33e-88 | 279 |
| MS.gene98436.t1 | AT5G63120 | 43.824 | 340 | 173 | 6 | 78 | 407 | 143 | 474 | 3.33e-88 | 279 |
| MS.gene98436.t1 | AT2G47330 | 41.944 | 391 | 210 | 7 | 95 | 473 | 219 | 604 | 2.98e-86 | 282 |
| MS.gene98436.t1 | AT3G58510 | 43.651 | 378 | 192 | 9 | 119 | 478 | 169 | 543 | 1.31e-85 | 276 |
| MS.gene98436.t1 | AT3G58510 | 43.651 | 378 | 192 | 9 | 119 | 478 | 169 | 543 | 1.31e-85 | 276 |
| MS.gene98436.t1 | AT3G58510 | 43.651 | 378 | 192 | 9 | 119 | 478 | 169 | 543 | 1.31e-85 | 276 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 190 | 581 | 2.27e-84 | 278 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT1G20920 | 40.806 | 397 | 215 | 8 | 103 | 484 | 528 | 919 | 2.29e-83 | 280 |
| MS.gene98436.t1 | AT5G14610 | 41.141 | 333 | 179 | 7 | 106 | 427 | 171 | 497 | 3.33e-78 | 254 |
| MS.gene98436.t1 | AT5G51280 | 36.855 | 407 | 236 | 8 | 96 | 485 | 138 | 540 | 2.82e-76 | 251 |
| MS.gene98436.t1 | AT3G22330 | 41.176 | 340 | 183 | 7 | 120 | 449 | 122 | 454 | 6.61e-75 | 248 |
| MS.gene98436.t1 | AT3G22310 | 41.092 | 348 | 186 | 8 | 108 | 443 | 120 | 460 | 1.01e-74 | 247 |
| MS.gene98436.t1 | AT3G22310 | 41.092 | 348 | 186 | 8 | 108 | 443 | 120 | 460 | 1.40e-74 | 247 |
| MS.gene98436.t1 | AT3G09620 | 39.119 | 386 | 184 | 9 | 103 | 473 | 395 | 744 | 1.76e-74 | 254 |
| MS.gene98436.t1 | AT3G09620 | 39.119 | 386 | 184 | 9 | 103 | 473 | 396 | 745 | 1.80e-74 | 254 |
| MS.gene98436.t1 | AT4G33370 | 36.207 | 406 | 240 | 7 | 96 | 485 | 89 | 491 | 4.47e-73 | 241 |
| MS.gene98436.t1 | AT2G33730 | 35.980 | 403 | 222 | 6 | 103 | 475 | 312 | 708 | 3.14e-71 | 241 |
| MS.gene98436.t1 | AT3G06480 | 40.762 | 341 | 179 | 8 | 88 | 416 | 423 | 752 | 8.35e-71 | 241 |
| MS.gene98436.t1 | AT5G26742 | 38.015 | 413 | 224 | 11 | 53 | 452 | 66 | 459 | 9.77e-67 | 229 |
| MS.gene98436.t1 | AT5G26742 | 38.015 | 413 | 224 | 11 | 53 | 452 | 66 | 459 | 9.92e-67 | 229 |
| MS.gene98436.t1 | AT5G26742 | 41.641 | 329 | 173 | 8 | 137 | 452 | 44 | 366 | 2.57e-65 | 224 |
| MS.gene98436.t1 | AT5G60990 | 36.364 | 363 | 209 | 7 | 97 | 442 | 2 | 359 | 3.66e-65 | 218 |
| MS.gene98436.t1 | AT1G28180 | 36.752 | 351 | 212 | 4 | 132 | 475 | 3 | 350 | 1.42e-63 | 211 |
| MS.gene98436.t1 | AT5G62190 | 38.012 | 342 | 191 | 8 | 121 | 447 | 115 | 450 | 1.36e-59 | 208 |
| MS.gene98436.t1 | AT1G16280 | 35.440 | 364 | 208 | 7 | 101 | 448 | 55 | 407 | 2.98e-58 | 201 |
| MS.gene98436.t1 | AT4G00660 | 33.702 | 362 | 220 | 7 | 98 | 449 | 123 | 474 | 2.07e-57 | 199 |
| MS.gene98436.t1 | AT4G00660 | 33.702 | 362 | 220 | 7 | 98 | 449 | 123 | 474 | 2.07e-57 | 199 |
| MS.gene98436.t1 | AT4G16630 | 34.605 | 367 | 210 | 8 | 106 | 454 | 169 | 523 | 8.01e-57 | 202 |
| MS.gene98436.t1 | AT2G45810 | 33.702 | 362 | 220 | 6 | 98 | 449 | 146 | 497 | 2.04e-55 | 194 |
| MS.gene98436.t1 | AT1G77030 | 35.411 | 353 | 212 | 7 | 106 | 448 | 30 | 376 | 3.14e-55 | 199 |
| MS.gene98436.t1 | AT3G61240 | 31.463 | 410 | 256 | 7 | 51 | 449 | 72 | 467 | 2.10e-54 | 191 |
| MS.gene98436.t1 | AT3G61240 | 31.463 | 410 | 256 | 7 | 51 | 449 | 72 | 467 | 2.10e-54 | 191 |
| MS.gene98436.t1 | AT3G02065 | 33.249 | 397 | 245 | 8 | 103 | 483 | 109 | 501 | 2.79e-53 | 188 |
| MS.gene98436.t1 | AT3G02065 | 33.249 | 397 | 245 | 8 | 103 | 483 | 109 | 501 | 2.79e-53 | 188 |
| MS.gene98436.t1 | AT3G19760 | 31.728 | 353 | 223 | 5 | 103 | 446 | 34 | 377 | 1.18e-51 | 181 |
| MS.gene98436.t1 | AT1G72730 | 33.237 | 346 | 213 | 5 | 121 | 458 | 60 | 395 | 1.19e-51 | 181 |
| MS.gene98436.t1 | AT3G13920 | 32.877 | 365 | 220 | 7 | 97 | 449 | 28 | 379 | 1.54e-51 | 181 |
| MS.gene98436.t1 | AT1G54270 | 33.242 | 364 | 218 | 7 | 97 | 448 | 28 | 378 | 6.24e-51 | 179 |
| MS.gene98436.t1 | AT3G13920 | 32.698 | 367 | 223 | 7 | 97 | 449 | 28 | 384 | 8.17e-51 | 179 |
| MS.gene98436.t1 | AT3G13920 | 32.787 | 366 | 222 | 7 | 97 | 448 | 18 | 373 | 1.26e-50 | 178 |
| MS.gene98436.t1 | AT3G13920 | 32.698 | 367 | 223 | 7 | 97 | 449 | 32 | 388 | 2.42e-50 | 178 |
| MS.gene98436.t1 | AT1G54270 | 33.060 | 366 | 221 | 7 | 97 | 448 | 28 | 383 | 2.80e-50 | 177 |
| MS.gene98436.t1 | AT3G13920 | 32.698 | 367 | 223 | 7 | 97 | 449 | 28 | 384 | 3.12e-50 | 177 |
| MS.gene98436.t1 | AT1G51380 | 31.073 | 354 | 224 | 6 | 103 | 446 | 21 | 364 | 4.04e-50 | 177 |
| MS.gene98436.t1 | AT4G09730 | 31.414 | 382 | 240 | 9 | 103 | 463 | 111 | 491 | 8.80e-49 | 178 |
| MS.gene98436.t1 | AT3G02065 | 32.970 | 367 | 228 | 7 | 131 | 483 | 2 | 364 | 4.21e-48 | 171 |
| MS.gene98436.t1 | AT3G09720 | 31.452 | 372 | 217 | 9 | 121 | 474 | 160 | 511 | 2.31e-47 | 172 |
| MS.gene98436.t1 | AT3G09720 | 31.452 | 372 | 217 | 9 | 121 | 474 | 160 | 511 | 2.31e-47 | 172 |
| MS.gene98436.t1 | AT1G71370 | 32.787 | 366 | 222 | 10 | 102 | 447 | 12 | 373 | 1.63e-46 | 171 |
| MS.gene98436.t1 | AT5G63630 | 31.892 | 370 | 228 | 8 | 93 | 441 | 44 | 410 | 2.30e-45 | 167 |
| MS.gene98436.t1 | AT5G08610 | 31.233 | 365 | 228 | 7 | 98 | 441 | 376 | 738 | 2.83e-45 | 170 |
| MS.gene98436.t1 | AT5G08620 | 30.952 | 420 | 257 | 13 | 45 | 441 | 27 | 436 | 7.06e-45 | 166 |
| MS.gene98436.t1 | AT5G63630 | 31.892 | 370 | 228 | 8 | 93 | 441 | 238 | 604 | 8.29e-45 | 168 |
| MS.gene98436.t1 | AT5G05450 | 32.479 | 351 | 208 | 8 | 122 | 447 | 36 | 382 | 4.45e-44 | 164 |
| MS.gene98436.t1 | AT5G65900 | 32.682 | 358 | 223 | 8 | 104 | 448 | 154 | 506 | 1.05e-43 | 164 |
| MS.gene98436.t1 | AT1G63250 | 30.856 | 444 | 254 | 12 | 20 | 441 | 273 | 685 | 3.30e-41 | 158 |
| MS.gene98436.t1 | AT3G18600 | 34.132 | 334 | 203 | 7 | 121 | 443 | 108 | 435 | 5.13e-41 | 155 |
| MS.gene98436.t1 | AT5G11170 | 32.143 | 336 | 209 | 7 | 121 | 446 | 65 | 391 | 2.05e-40 | 151 |
| MS.gene98436.t1 | AT5G11200 | 32.143 | 336 | 209 | 7 | 121 | 446 | 65 | 391 | 2.05e-40 | 151 |
| MS.gene98436.t1 | AT2G07750 | 31.347 | 386 | 240 | 9 | 78 | 441 | 350 | 732 | 2.18e-39 | 153 |
| MS.gene98436.t1 | AT3G53110 | 31.250 | 384 | 221 | 14 | 94 | 447 | 81 | 451 | 4.46e-38 | 146 |
| MS.gene98436.t1 | AT3G16840 | 28.788 | 396 | 205 | 10 | 122 | 443 | 210 | 602 | 4.52e-37 | 146 |
| MS.gene98436.t1 | AT3G16840 | 28.788 | 396 | 205 | 10 | 122 | 443 | 211 | 603 | 4.70e-37 | 146 |
| MS.gene98436.t1 | AT5G54910 | 30.340 | 412 | 261 | 11 | 99 | 496 | 66 | 465 | 3.46e-36 | 143 |
| MS.gene98436.t1 | AT1G12770 | 28.109 | 402 | 231 | 10 | 102 | 445 | 108 | 509 | 2.27e-35 | 139 |
| MS.gene98436.t1 | AT1G12770 | 28.109 | 402 | 231 | 10 | 102 | 445 | 108 | 509 | 2.27e-35 | 139 |
| MS.gene98436.t1 | AT5G11170 | 31.646 | 316 | 197 | 7 | 141 | 446 | 2 | 308 | 2.34e-35 | 135 |
| MS.gene98436.t1 | AT5G11200 | 28.723 | 376 | 210 | 7 | 121 | 446 | 65 | 432 | 4.39e-34 | 134 |
| MS.gene98436.t1 | AT1G71280 | 32.792 | 308 | 179 | 8 | 111 | 411 | 24 | 310 | 2.91e-33 | 129 |
| MS.gene98436.t1 | AT4G34910 | 28.645 | 391 | 220 | 9 | 102 | 437 | 44 | 430 | 5.80e-33 | 133 |
| MS.gene98436.t1 | AT2G40700 | 27.805 | 410 | 208 | 12 | 121 | 447 | 50 | 454 | 8.19e-33 | 132 |
| MS.gene98436.t1 | AT1G71280 | 32.362 | 309 | 181 | 8 | 111 | 412 | 24 | 311 | 1.47e-32 | 130 |
| MS.gene98436.t1 | AT3G06980 | 27.363 | 402 | 254 | 14 | 93 | 459 | 363 | 761 | 2.02e-32 | 132 |
| MS.gene98436.t1 | AT1G51380 | 31.818 | 220 | 139 | 4 | 103 | 320 | 21 | 231 | 4.69e-28 | 113 |
| MS.gene98436.t1 | AT1G51380 | 31.818 | 220 | 139 | 4 | 103 | 320 | 21 | 231 | 2.52e-27 | 112 |
| MS.gene98436.t1 | AT1G51380 | 31.818 | 220 | 139 | 4 | 103 | 320 | 21 | 231 | 3.87e-27 | 111 |
| MS.gene98436.t1 | AT5G19210 | 29.863 | 365 | 204 | 15 | 111 | 436 | 83 | 434 | 1.09e-26 | 113 |
| MS.gene98436.t1 | AT4G15850 | 26.042 | 384 | 198 | 12 | 140 | 449 | 73 | 444 | 1.55e-23 | 104 |
| MS.gene98436.t1 | AT1G28180 | 38.053 | 113 | 70 | 0 | 132 | 244 | 3 | 115 | 1.26e-18 | 82.4 |
| MS.gene98436.t1 | AT2G28600 | 26.623 | 308 | 204 | 9 | 176 | 471 | 194 | 491 | 8.82e-18 | 86.7 |
| MS.gene98436.t1 | AT5G11200 | 28.571 | 217 | 136 | 4 | 239 | 446 | 244 | 450 | 2.45e-17 | 85.1 |
| MS.gene98436.t1 | AT5G11200 | 32.447 | 188 | 116 | 5 | 121 | 305 | 65 | 244 | 4.43e-15 | 78.2 |
| MS.gene98436.t1 | AT5G19210 | 28.030 | 264 | 155 | 10 | 203 | 436 | 19 | 277 | 7.11e-15 | 76.3 |
| MS.gene98436.t1 | AT5G19210 | 28.030 | 264 | 155 | 10 | 203 | 436 | 19 | 277 | 7.11e-15 | 76.3 |
| MS.gene98436.t1 | AT1G27880 | 23.340 | 467 | 276 | 14 | 46 | 486 | 215 | 625 | 4.81e-14 | 75.5 |
| MS.gene98436.t1 | AT1G27880 | 23.340 | 467 | 276 | 14 | 46 | 486 | 215 | 625 | 4.86e-14 | 75.5 |
| MS.gene98436.t1 | AT1G59990 | 28.643 | 199 | 117 | 6 | 283 | 465 | 352 | 541 | 5.60e-12 | 68.6 |
| MS.gene98436.t1 | AT1G59990 | 28.643 | 199 | 117 | 6 | 283 | 465 | 352 | 541 | 6.46e-12 | 68.6 |
Find 113 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTAGCTCAGGAATTTA+TGG | 0.153581 | 5.4:-18553967 | MS.gene98436:CDS |
| GAAGATTATGTTCATAGAAT+TGG | 0.238610 | 5.4:-18552799 | MS.gene98436:CDS |
| TGGCACACATGTTAAGAAAA+AGG | 0.253159 | 5.4:-18552516 | MS.gene98436:intron |
| ATATAGGAGTCCAAGCTTTA+TGG | 0.255279 | 5.4:-18552381 | MS.gene98436:intron |
| GTAAAGAGGTTTGAGGATTC+AGG | 0.258171 | 5.4:-18557138 | MS.gene98436:CDS |
| GGAATATTTCAGGGACTTGC+TGG | 0.276066 | 5.4:-18552599 | MS.gene98436:intron |
| CTAGGGAAGACACTTGCTTT+TGG | 0.301902 | 5.4:-18556207 | MS.gene98436:intron |
| GTGGAATCAGTTTGTTTGTA+TGG | 0.320024 | 5.4:-18554870 | MS.gene98436:CDS |
| ATTCTTCACACATTTGAATA+AGG | 0.322677 | 5.4:-18552737 | MS.gene98436:intron |
| TATTCAAGATCTGGTTGAAA+TGG | 0.335191 | 5.4:-18554611 | MS.gene98436:CDS |
| ACATAATCTTCTAGAGTTAG+AGG | 0.337678 | 5.4:+18552811 | None:intergenic |
| GAGTTCTGTGTTGTTGTTAA+GGG | 0.348271 | 5.4:+18557398 | None:intergenic |
| TTGATTGGAATTGCGGCAAC+TGG | 0.349586 | 5.4:-18557021 | MS.gene98436:CDS |
| TTCATCCAGGATATTGTCAT+TGG | 0.350181 | 5.4:-18554646 | MS.gene98436:intron |
| TATAGGAGTCCAAGCTTTAT+GGG | 0.366000 | 5.4:-18552380 | MS.gene98436:intron |
| CCACAAAAGATACTTCTTGT+AGG | 0.370133 | 5.4:+18554578 | None:intergenic |
| CGGCGGTGATGTGTCGGTTT+CGG | 0.371105 | 5.4:-18557220 | MS.gene98436:CDS |
| ATACTTGGTCAGACATGTTC+TGG | 0.373447 | 5.4:-18554188 | MS.gene98436:intron |
| GATGAACCGATTGTGGTTAC+TGG | 0.377724 | 5.4:-18557192 | MS.gene98436:CDS |
| TTCTGGTTCGGTGGATAAAA+CGG | 0.378366 | 5.4:+18557425 | None:intergenic |
| AAGATTATGTTCATAGAATT+GGG | 0.393407 | 5.4:-18552798 | MS.gene98436:CDS |
| TGAGTTCTGTGTTGTTGTTA+AGG | 0.400441 | 5.4:+18557397 | None:intergenic |
| AGTGATTTGTGGTTGTTTGT+TGG | 0.401420 | 5.4:+18554842 | None:intergenic |
| CAAATAGTCCGCTCTATACT+TGG | 0.405601 | 5.4:-18554203 | MS.gene98436:CDS |
| CTCCGATTCAATCACGTGCT+TGG | 0.415933 | 5.4:-18557068 | MS.gene98436:CDS |
| GCTTTATGGGGCTCACTTCA+AGG | 0.417352 | 5.4:-18552367 | MS.gene98436:CDS |
| TTAGACTTTGGAGCATCAAC+AGG | 0.417852 | 5.4:+18552339 | None:intergenic |
| TATTTGCATGACATCATGAT+TGG | 0.425052 | 5.4:+18553829 | None:intergenic |
| TTGATCACTACTTCAACATC+TGG | 0.425118 | 5.4:+18552844 | None:intergenic |
| GGAATTGCGGCAACTGGGTC+AGG | 0.427573 | 5.4:-18557015 | MS.gene98436:intron |
| TCAAATGTGTGAAGAATGTA+TGG | 0.428680 | 5.4:+18552743 | None:intergenic |
| CCAAATTTCAAAAGATCGTC+TGG | 0.430831 | 5.4:+18552536 | None:intergenic |
| TTCTTTCCAGTAACCACAAT+CGG | 0.431883 | 5.4:+18557186 | None:intergenic |
| AACTTGTGACAGGTTGTTGT+AGG | 0.435320 | 5.4:-18553869 | MS.gene98436:intron |
| GTTCATAGAATTGGGCGGAC+TGG | 0.441574 | 5.4:-18552790 | MS.gene98436:CDS |
| GAATGGAAGCTGTCCTTTGA+TGG | 0.441746 | 5.4:-18553360 | MS.gene98436:intron |
| CAAATCACTGCACTAAAATC+TGG | 0.442805 | 5.4:-18554828 | MS.gene98436:CDS |
| CCCTCGTAGGAGAGAGCATA+AGG | 0.444894 | 5.4:+18556112 | None:intergenic |
| CTTTCTCAGGAATCGAGTAT+TGG | 0.445276 | 5.4:-18553650 | MS.gene98436:intron |
| TTGTTGTTAAGGGTTTGTTC+TGG | 0.450386 | 5.4:+18557408 | None:intergenic |
| TTGGATGGTCGTGATTTGAT+TGG | 0.453523 | 5.4:-18557036 | MS.gene98436:CDS |
| ATTCAAGATCTGGTTGAAAT+GGG | 0.456701 | 5.4:-18554610 | MS.gene98436:CDS |
| TGATGTGTCGGTTTCGGCGT+CGG | 0.456803 | 5.4:-18557214 | MS.gene98436:CDS |
| CAACATTCAAGCACATTCTC+AGG | 0.458616 | 5.4:+18557111 | None:intergenic |
| TGATGTGGCTGCACGAGGAT+TGG | 0.459395 | 5.4:-18552872 | MS.gene98436:CDS |
| GTTAAGGGTTTGTTCTGGTT+CGG | 0.462184 | 5.4:+18557413 | None:intergenic |
| TCCCGGTCGTATTCAAGATC+TGG | 0.466067 | 5.4:-18554620 | MS.gene98436:CDS |
| CGCCGTGTATTTCTCATCTC+CGG | 0.471895 | 5.4:+18557161 | None:intergenic |
| GAATATTTCAGGGACTTGCT+GGG | 0.474454 | 5.4:-18552598 | MS.gene98436:intron |
| AACCAGATCTTGAATACGAC+CGG | 0.475620 | 5.4:+18554618 | None:intergenic |
| CCTTATGCTCTCTCCTACGA+GGG | 0.480938 | 5.4:-18556112 | MS.gene98436:CDS |
| GCACTATCATTATTCAAGAA+TGG | 0.480956 | 5.4:-18553377 | MS.gene98436:CDS |
| TAAAGAGGTTTGAGGATTCA+GGG | 0.494431 | 5.4:-18557137 | MS.gene98436:CDS |
| GAATGTGCTTGAATGTTGTA+AGG | 0.501105 | 5.4:-18557106 | MS.gene98436:CDS |
| TTCATAACATGCATAATAGC+TGG | 0.502973 | 5.4:+18556180 | None:intergenic |
| AGCAGTTCATCACTTAGCTC+AGG | 0.508831 | 5.4:-18553976 | MS.gene98436:CDS |
| GCAAAGAGGATTCCGACCCT+TGG | 0.519670 | 5.4:+18556134 | None:intergenic |
| ACTGGACGAGCTGGTAAGAA+AGG | 0.524323 | 5.4:-18552772 | MS.gene98436:CDS |
| CCCAAAAGAAAACACGAAAA+CGG | 0.527156 | 5.4:-18557327 | MS.gene98436:CDS |
| TGACAACGGCGGTGATGTGT+CGG | 0.539695 | 5.4:-18557226 | MS.gene98436:CDS |
| ATAAAACAGCATACCATCAA+AGG | 0.542882 | 5.4:+18553347 | None:intergenic |
| AGAAATACACGGCGGTAAAG+AGG | 0.545616 | 5.4:-18557152 | MS.gene98436:CDS |
| AGCAGATCGGATGCTTGACA+TGG | 0.547306 | 5.4:-18554234 | MS.gene98436:CDS |
| GGCCAAGCACGTGATTGAAT+CGG | 0.548949 | 5.4:+18557066 | None:intergenic |
| CACGGCGGTAAAGAGGTTTG+AGG | 0.549768 | 5.4:-18557145 | MS.gene98436:CDS |
| GAAGAGCAAGGGTTCTTCCA+AGG | 0.552135 | 5.4:-18556151 | MS.gene98436:CDS |
| TGTACAAATGGGAAACCACA+CGG | 0.557076 | 5.4:-18553618 | MS.gene98436:CDS |
| ATGAATAAGCGGAAGAGCAA+GGG | 0.557187 | 5.4:-18556162 | MS.gene98436:CDS |
| ATTGGGCGGACTGGACGAGC+TGG | 0.562548 | 5.4:-18552781 | MS.gene98436:CDS |
| GAAGTGAGCCCCATAAAGCT+TGG | 0.565873 | 5.4:+18552371 | None:intergenic |
| TCAGATGTATTGTGTGATGC+TGG | 0.566166 | 5.4:-18554906 | MS.gene98436:CDS |
| AAGGGTTTGTTCTGGTTCGG+TGG | 0.568815 | 5.4:+18557416 | None:intergenic |
| TGGTTATGTTCAGTGCTACA+TGG | 0.571493 | 5.4:-18554004 | MS.gene98436:CDS |
| GAATCAGTTTGTTTGTATGG+TGG | 0.575683 | 5.4:-18554867 | MS.gene98436:CDS |
| GATATTGTCATTGGAACTCC+CGG | 0.581051 | 5.4:-18554637 | MS.gene98436:CDS |
| GTGGTTACTGGAAAGAATGC+CGG | 0.582449 | 5.4:-18557180 | MS.gene98436:CDS |
| GCCTTATGCTCTCTCCTACG+AGG | 0.583509 | 5.4:-18556113 | MS.gene98436:CDS |
| GGCGTCGGATGAACCGATTG+TGG | 0.583758 | 5.4:-18557199 | MS.gene98436:CDS |
| TGGAAAGCAGTGTCTATAAG+TGG | 0.585177 | 5.4:-18553428 | MS.gene98436:CDS |
| GCACGTGATTGAATCGGAGA+AGG | 0.586015 | 5.4:+18557072 | None:intergenic |
| TCGTGATTTGATTGGAATTG+CGG | 0.593562 | 5.4:-18557028 | MS.gene98436:CDS |
| GCATCCGATCTGCTTCATCA+AGG | 0.595521 | 5.4:+18554243 | None:intergenic |
| AATATTTCAGGGACTTGCTG+GGG | 0.596100 | 5.4:-18552597 | MS.gene98436:intron |
| TGATTGGAATTGCGGCAACT+GGG | 0.600555 | 5.4:-18557020 | MS.gene98436:CDS |
| TGTGATGCTGGTAAATCTTG+TGG | 0.600721 | 5.4:-18554894 | MS.gene98436:CDS |
| AAGAGCAAGGGTTCTTCCAA+GGG | 0.602731 | 5.4:-18556150 | MS.gene98436:CDS |
| TATGAATAAGCGGAAGAGCA+AGG | 0.607867 | 5.4:-18556163 | MS.gene98436:CDS |
| GCTAAGTGATGAACTGCTAA+CGG | 0.609098 | 5.4:+18553981 | None:intergenic |
| GCTACTGATGTGGCTGCACG+AGG | 0.611530 | 5.4:-18552877 | MS.gene98436:CDS |
| GTACAAATGGGAAACCACAC+GGG | 0.611553 | 5.4:-18553617 | MS.gene98436:CDS |
| GCAAGGGTTCTTCCAAGGGT+CGG | 0.615294 | 5.4:-18556146 | MS.gene98436:CDS |
| TTATGCATGTTATGAATAAG+CGG | 0.617150 | 5.4:-18556173 | MS.gene98436:CDS |
| AATGTGCTTGAATGTTGTAA+GGG | 0.617943 | 5.4:-18557105 | MS.gene98436:CDS |
| GTGGAGAAAATGCTTCAACA+AGG | 0.622499 | 5.4:-18553595 | MS.gene98436:CDS |
| AGGTCCTTGATGAAGCAGAT+CGG | 0.623442 | 5.4:-18554247 | MS.gene98436:CDS |
| TGCTGGTAAATCTTGTGGTG+TGG | 0.625650 | 5.4:-18554889 | MS.gene98436:CDS |
| TGGAGAAAATGCTTCAACAA+GGG | 0.625673 | 5.4:-18553594 | MS.gene98436:intron |
| ACAGGTTGTTGTAGGCTCAG+AGG | 0.629287 | 5.4:-18553861 | MS.gene98436:intron |
| TGGGCAGATTGCTACTGATG+TGG | 0.630709 | 5.4:-18552887 | MS.gene98436:intron |
| GGAGAGAGCATAAGGCAAAG+AGG | 0.632906 | 5.4:+18556120 | None:intergenic |
| GCAGATCGGATGCTTGACAT+GGG | 0.636956 | 5.4:-18554233 | MS.gene98436:CDS |
| TGTTGAGCTAGCTCCCTCGT+AGG | 0.646096 | 5.4:+18556099 | None:intergenic |
| ATAGGAGTCCAAGCTTTATG+GGG | 0.655015 | 5.4:-18552379 | MS.gene98436:intron |
| ACCAGATCTTGAATACGACC+GGG | 0.658494 | 5.4:+18554619 | None:intergenic |
| CAAATGGGAAACCACACGGG+TGG | 0.659561 | 5.4:-18553614 | MS.gene98436:CDS |
| ATCACAGCATGAGCGCACAA+AGG | 0.688375 | 5.4:-18553399 | MS.gene98436:CDS |
| CAAATGTGTGAAGAATGTAT+GGG | 0.699602 | 5.4:+18552744 | None:intergenic |
| TGCCGGAGATGAGAAATACA+CGG | 0.715333 | 5.4:-18557163 | MS.gene98436:CDS |
| ATGTCTGACCAAGTATAGAG+CGG | 0.717626 | 5.4:+18554195 | None:intergenic |
| ATTATGTTCATAGAATTGGG+CGG | 0.720125 | 5.4:-18552795 | MS.gene98436:CDS |
| AAATCGGAGGAAAATGACAA+CGG | 0.729121 | 5.4:-18557240 | MS.gene98436:CDS |
| TCGGAGGAAAATGACAACGG+CGG | 0.752711 | 5.4:-18557237 | MS.gene98436:CDS |
| CGGAGATGAGAAATACACGG+CGG | 0.833516 | 5.4:-18557160 | MS.gene98436:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAACTAAAATACA+AGG | + | chr5.4:18554062-18554081 | None:intergenic | 10.0% |
| !! | AAAAAAAAACTAAAATACAA+GGG | + | chr5.4:18554061-18554080 | None:intergenic | 10.0% |
| !! | AATTTAATTGTCTATAAAAT+AGG | + | chr5.4:18555057-18555076 | None:intergenic | 10.0% |
| !! | ATAATATAATAATATATACC+TGG | - | chr5.4:18556216-18556235 | MS.gene98436:intron | 10.0% |
| !!! | TTCAATGAATATATTTTATT+TGG | - | chr5.4:18555242-18555261 | MS.gene98436:intron | 10.0% |
| !! | CTTATATATAACAGAAATAA+AGG | + | chr5.4:18557087-18557106 | None:intergenic | 15.0% |
| !!! | AATGTTATTTTTTTAGACTT+TGG | + | chr5.4:18557422-18557441 | None:intergenic | 15.0% |
| !!! | ACGTTTAATTTTTATTTGTT+TGG | - | chr5.4:18553758-18553777 | MS.gene98436:CDS | 15.0% |
| !!! | ATGAATATATTTTATTTGGT+TGG | - | chr5.4:18555246-18555265 | MS.gene98436:intron | 15.0% |
| !!! | ATTAAGTTTTTTATCCAAAT+AGG | - | chr5.4:18553229-18553248 | MS.gene98436:intron | 15.0% |
| !!! | TGTAACTTTATTTTATCTTT+TGG | + | chr5.4:18552893-18552912 | None:intergenic | 15.0% |
| !!! | TTAAGTTTTTTATCCAAATA+GGG | - | chr5.4:18553230-18553249 | MS.gene98436:intron | 15.0% |
| !!! | TTATTTCTGTTATATATAAG+TGG | - | chr5.4:18557087-18557106 | MS.gene98436:CDS | 15.0% |
| !! | AAAAATATATCCAAAGAGAA+AGG | + | chr5.4:18553855-18553874 | None:intergenic | 20.0% |
| !! | AAAATAACAATTATCCAACA+TGG | + | chr5.4:18556538-18556557 | None:intergenic | 20.0% |
| !! | AAGATTATGTTCATAGAATT+GGG | - | chr5.4:18556948-18556967 | MS.gene98436:intron | 20.0% |
| !! | ATAACTTTCTGCTTTAATAT+AGG | - | chr5.4:18557349-18557368 | MS.gene98436:CDS | 20.0% |
| !! | ATAAGTTAAATAATGTCTTC+AGG | - | chr5.4:18556292-18556311 | MS.gene98436:intron | 20.0% |
| !! | ATGTGTTTGTATTATTGAAA+TGG | - | chr5.4:18552778-18552797 | MS.gene98436:CDS | 20.0% |
| !! | TAAGTTAAAACAATGTAATG+AGG | + | chr5.4:18554497-18554516 | None:intergenic | 20.0% |
| !! | TAAGTTAAATAATGTCTTCA+GGG | - | chr5.4:18556293-18556312 | MS.gene98436:intron | 20.0% |
| !! | TAATTGTCTATAAAATAGGA+CGG | + | chr5.4:18555053-18555072 | None:intergenic | 20.0% |
| !! | TATTATTGAAATGGTTGAAT+TGG | - | chr5.4:18552787-18552806 | MS.gene98436:CDS | 20.0% |
| !!! | ACTTTTTTTTTCTTTCATAG+TGG | - | chr5.4:18554171-18554190 | MS.gene98436:intron | 20.0% |
| !!! | ATCTTTTCTTTTTGTAACTA+GGG | - | chr5.4:18553522-18553541 | MS.gene98436:intron | 20.0% |
| !!! | ATTTGTTTTCTCAATCTAAT+GGG | - | chr5.4:18556840-18556859 | MS.gene98436:intron | 20.0% |
| !!! | GTTATTTTTGTTTTTCTTCT+TGG | + | chr5.4:18552381-18552400 | None:intergenic | 20.0% |
| !!! | TATCTTTTCTTTTTGTAACT+AGG | - | chr5.4:18553521-18553540 | MS.gene98436:intron | 20.0% |
| !!! | TATTTGTTTTCTCAATCTAA+TGG | - | chr5.4:18556839-18556858 | MS.gene98436:intron | 20.0% |
| !!! | TTAAAACAAAGGGTTAATTT+TGG | - | chr5.4:18554093-18554112 | MS.gene98436:intron | 20.0% |
| ! | AAATTCAGTAGAAATGCAAA+TGG | + | chr5.4:18555343-18555362 | None:intergenic | 25.0% |
| ! | AAGATATTTAAACTTGTGAC+AGG | - | chr5.4:18555867-18555886 | MS.gene98436:intron | 25.0% |
| ! | AAGTTAAATAATGTCTTCAG+GGG | - | chr5.4:18556294-18556313 | MS.gene98436:intron | 25.0% |
| ! | AGAAAAAAGCTCCATAAATA+TGG | + | chr5.4:18555028-18555047 | None:intergenic | 25.0% |
| ! | AGAAAACAATCAAAAGTTGA+TGG | + | chr5.4:18556501-18556520 | None:intergenic | 25.0% |
| ! | AGATGAAAACAGATGAAAAA+TGG | + | chr5.4:18554229-18554248 | None:intergenic | 25.0% |
| ! | AGTGAAACAAAAAATAAGCT+GGG | + | chr5.4:18555690-18555709 | None:intergenic | 25.0% |
| ! | ATAAAAAACATCATCTTAGG+AGG | + | chr5.4:18556610-18556629 | None:intergenic | 25.0% |
| ! | ATAACAGAAATAAAGGACAA+GGG | + | chr5.4:18557080-18557099 | None:intergenic | 25.0% |
| ! | ATATTTAGAAATCCACACTT+AGG | + | chr5.4:18553504-18553523 | None:intergenic | 25.0% |
| ! | ATCTTATGAAAACAGCTTAT+AGG | - | chr5.4:18553137-18553156 | MS.gene98436:intron | 25.0% |
| ! | ATTCTTCACACATTTGAATA+AGG | - | chr5.4:18557009-18557028 | MS.gene98436:intron | 25.0% |
| ! | CCACGAACAAAAAAAATATT+CGG | + | chr5.4:18554302-18554321 | None:intergenic | 25.0% |
| ! | GAAGATTATGTTCATAGAAT+TGG | - | chr5.4:18556947-18556966 | MS.gene98436:intron | 25.0% |
| ! | GGAATGTTATAACCAAAATT+TGG | - | chr5.4:18554540-18554559 | MS.gene98436:intron | 25.0% |
| ! | GTAAAGCTATAACTTCAAAA+GGG | + | chr5.4:18556661-18556680 | None:intergenic | 25.0% |
| ! | TAAAATCTTGTATCTTTCTC+AGG | - | chr5.4:18556083-18556102 | MS.gene98436:intron | 25.0% |
| ! | TATAACAGAAATAAAGGACA+AGG | + | chr5.4:18557081-18557100 | None:intergenic | 25.0% |
| ! | TCAAATAAACCAATCCAAAT+AGG | - | chr5.4:18553065-18553084 | MS.gene98436:intron | 25.0% |
| ! | TGGATAAAAAACATCATCTT+AGG | + | chr5.4:18556613-18556632 | None:intergenic | 25.0% |
| ! | TGTAAAGCTATAACTTCAAA+AGG | + | chr5.4:18556662-18556681 | None:intergenic | 25.0% |
| ! | TTATGCATGTTATGAATAAG+CGG | - | chr5.4:18553573-18553592 | MS.gene98436:intron | 25.0% |
| !! | AAATATCTGCAACCAAATTT+TGG | + | chr5.4:18554555-18554574 | None:intergenic | 25.0% |
| !! | AATGAGTTGGAAATTGTTAA+GGG | - | chr5.4:18553972-18553991 | MS.gene98436:CDS | 25.0% |
| !! | ATGAAGATACATACTTTTAC+AGG | + | chr5.4:18555813-18555832 | None:intergenic | 25.0% |
| !! | GAAAACAATCAAAAGTTGAT+GGG | + | chr5.4:18556500-18556519 | None:intergenic | 25.0% |
| !! | TCATTTGGTGAATCAATAAA+TGG | + | chr5.4:18554731-18554750 | None:intergenic | 25.0% |
| !! | TGAAGATACATACTTTTACA+GGG | + | chr5.4:18555812-18555831 | None:intergenic | 25.0% |
| !! | TTTGATAGTACCTGTAAATT+GGG | - | chr5.4:18554600-18554619 | MS.gene98436:CDS | 25.0% |
| !!! | AGTGGAAAATTGTTTTTGAT+TGG | - | chr5.4:18553932-18553951 | MS.gene98436:intron | 25.0% |
| !!! | ATACAGTAGAATGTTATTTC+TGG | - | chr5.4:18554672-18554691 | MS.gene98436:intron | 25.0% |
| !!! | ATTTTTGTTTTTCTTCTTGG+AGG | + | chr5.4:18552378-18552397 | None:intergenic | 25.0% |
| !!! | CTTGTTTTCATAATCTATCT+TGG | - | chr5.4:18552934-18552953 | MS.gene98436:intron | 25.0% |
| !!! | GGTTTTTGTTTTGTACAAAT+GGG | - | chr5.4:18556117-18556136 | MS.gene98436:CDS | 25.0% |
| !!! | GTGGAAAATTGTTTTTGATT+GGG | - | chr5.4:18553933-18553952 | MS.gene98436:intron | 25.0% |
| !!! | TACAAGATTTTAGCAAAAAG+AGG | + | chr5.4:18556075-18556094 | None:intergenic | 25.0% |
| !!! | TGGTTTTTGTTTTGTACAAA+TGG | - | chr5.4:18556116-18556135 | MS.gene98436:CDS | 25.0% |
| !!! | TTTTGATAGTACCTGTAAAT+TGG | - | chr5.4:18554599-18554618 | MS.gene98436:CDS | 25.0% |
| !!! | TTTTGGTTATAACATTCCAT+TGG | + | chr5.4:18554538-18554557 | None:intergenic | 25.0% |
| AAAAGTAACATCCTCTCTAT+TGG | + | chr5.4:18554648-18554667 | None:intergenic | 30.0% | |
| AAAATTGGAAAGGGGAAAAT+GGG | - | chr5.4:18554133-18554152 | MS.gene98436:intron | 30.0% | |
| AAAGTAACATCCTCTCTATT+GGG | + | chr5.4:18554647-18554666 | None:intergenic | 30.0% | |
| AATGTGCTTGAATGTTGTAA+GGG | - | chr5.4:18552641-18552660 | MS.gene98436:intron | 30.0% | |
| AATTGTAGAACCCAATTTAC+AGG | + | chr5.4:18554613-18554632 | None:intergenic | 30.0% | |
| AATTTCCCACTCATAATATC+AGG | + | chr5.4:18554000-18554019 | None:intergenic | 30.0% | |
| ACAGAATACAAACCAACAAA+AGG | + | chr5.4:18554971-18554990 | None:intergenic | 30.0% | |
| ACGACTATAAAATTGACATG+TGG | + | chr5.4:18555390-18555409 | None:intergenic | 30.0% | |
| ACTGTCTTAAATTTCCAACT+GGG | - | chr5.4:18554697-18554716 | MS.gene98436:intron | 30.0% | |
| ATAAAACAGCATACCATCAA+AGG | + | chr5.4:18556402-18556421 | None:intergenic | 30.0% | |
| ATACAAACCAACAAAAGGAA+AGG | + | chr5.4:18554966-18554985 | None:intergenic | 30.0% | |
| ATCCTTTACTTCTATGAACT+TGG | - | chr5.4:18553829-18553848 | MS.gene98436:intron | 30.0% | |
| ATTATGTTCATAGAATTGGG+CGG | - | chr5.4:18556951-18556970 | MS.gene98436:intron | 30.0% | |
| ATTCAAGATCTGGTTGAAAT+GGG | - | chr5.4:18555136-18555155 | MS.gene98436:intron | 30.0% | |
| ATTCTGTCAGATACAAGTTA+CGG | - | chr5.4:18554984-18555003 | MS.gene98436:intron | 30.0% | |
| CAAAACAGAATTCTGACATT+CGG | + | chr5.4:18555204-18555223 | None:intergenic | 30.0% | |
| CAAATGTGTGAAGAATGTAT+GGG | + | chr5.4:18557005-18557024 | None:intergenic | 30.0% | |
| CAATATCCTGGATGAAAAAA+AGG | + | chr5.4:18555096-18555115 | None:intergenic | 30.0% | |
| CAGTGAAACAAAAAATAAGC+TGG | + | chr5.4:18555691-18555710 | None:intergenic | 30.0% | |
| CTGGTTTACTTCCATATTTA+TGG | - | chr5.4:18555014-18555033 | MS.gene98436:intron | 30.0% | |
| GAAATAAGAACAGAAGAATC+TGG | + | chr5.4:18556633-18556652 | None:intergenic | 30.0% | |
| GAATGAATGGGAATATTTCA+GGG | - | chr5.4:18557138-18557157 | MS.gene98436:CDS | 30.0% | |
| GCACTATCATTATTCAAGAA+TGG | - | chr5.4:18556369-18556388 | MS.gene98436:intron | 30.0% | |
| GTAGGAATGAAAATTGGAAA+GGG | - | chr5.4:18554124-18554143 | MS.gene98436:intron | 30.0% | |
| TAGCAATATTGCATCATGTA+TGG | - | chr5.4:18553793-18553812 | MS.gene98436:intron | 30.0% | |
| TAGCGTATTAGCAAATGTAT+TGG | + | chr5.4:18555287-18555306 | None:intergenic | 30.0% | |
| TAGGAATGAAAATTGGAAAG+GGG | - | chr5.4:18554125-18554144 | MS.gene98436:intron | 30.0% | |
| TATGCTCAGAAGAAATTAGA+AGG | + | chr5.4:18555641-18555660 | None:intergenic | 30.0% | |
| TATTCAAGATCTGGTTGAAA+TGG | - | chr5.4:18555135-18555154 | MS.gene98436:intron | 30.0% | |
| TATTTGCATGACATCATGAT+TGG | + | chr5.4:18555920-18555939 | None:intergenic | 30.0% | |
| TCAAATGTGTGAAGAATGTA+TGG | + | chr5.4:18557006-18557025 | None:intergenic | 30.0% | |
| TGAAAACAGCATATGAACAT+GGG | + | chr5.4:18553091-18553110 | None:intergenic | 30.0% | |
| TGAATGAATGGGAATATTTC+AGG | - | chr5.4:18557137-18557156 | MS.gene98436:CDS | 30.0% | |
| TTCATAACATGCATAATAGC+TGG | + | chr5.4:18553569-18553588 | None:intergenic | 30.0% | |
| TTCATGGAAAAAATCGAAAC+TGG | + | chr5.4:18557288-18557307 | None:intergenic | 30.0% | |
| ! | AAAAGCAACCTTTTGTATCA+AGG | + | chr5.4:18554367-18554386 | None:intergenic | 30.0% |
| ! | AAAGCAACCTTTTGTATCAA+GGG | + | chr5.4:18554366-18554385 | None:intergenic | 30.0% |
| ! | AAGTGGATTTGAATTCATCT+AGG | + | chr5.4:18556693-18556712 | None:intergenic | 30.0% |
| ! | ACAAAAAATGGTAATGCACA+AGG | + | chr5.4:18555476-18555495 | None:intergenic | 30.0% |
| ! | ACCAGTTCATACATAGTTTT+TGG | + | chr5.4:18556465-18556484 | None:intergenic | 30.0% |
| ! | ATACATACTTTTACAGGGTT+GGG | + | chr5.4:18555807-18555826 | None:intergenic | 30.0% |
| ! | CACAGCTACATTTTATCATT+TGG | + | chr5.4:18554746-18554765 | None:intergenic | 30.0% |
| ! | GAAGAAAAAGCACAACAAAT+CGG | - | chr5.4:18552490-18552509 | MS.gene98436:intron | 30.0% |
| ! | GAATGAGTTGGAAATTGTTA+AGG | - | chr5.4:18553971-18553990 | MS.gene98436:CDS | 30.0% |
| ! | TACTGAATTTTCTTTGATCC+TGG | - | chr5.4:18555353-18555372 | MS.gene98436:intron | 30.0% |
| ! | TTGTTTTCTCTGCAATACTT+TGG | - | chr5.4:18556512-18556531 | MS.gene98436:intron | 30.0% |
| !! | ACATAATCTTCTAGAGTTAG+AGG | + | chr5.4:18556938-18556957 | None:intergenic | 30.0% |
| !! | AGTTTTATATCTCTATACCG+AGG | + | chr5.4:18553256-18553275 | None:intergenic | 30.0% |
| !! | ATCTGTTTCTATCTTGACAA+TGG | - | chr5.4:18554245-18554264 | MS.gene98436:CDS | 30.0% |
| !! | ATTTTTCTAGTAAAGCAAGC+AGG | + | chr5.4:18555978-18555997 | None:intergenic | 30.0% |
| !! | CTTACTTTTCTTCTCTGATT+CGG | + | chr5.4:18552468-18552487 | None:intergenic | 30.0% |
| !! | TCTGTTTCTATCTTGACAAT+GGG | - | chr5.4:18554246-18554265 | MS.gene98436:CDS | 30.0% |
| !!! | CCGAATATTTTTTTTGTTCG+TGG | - | chr5.4:18554299-18554318 | MS.gene98436:intron | 30.0% |
| !!! | GAAACATCTAGCTTTTGATT+GGG | - | chr5.4:18553889-18553908 | MS.gene98436:intron | 30.0% |
| !!! | GCATTACCATTTTTTGTTCT+AGG | - | chr5.4:18555479-18555498 | MS.gene98436:intron | 30.0% |
| !!! | TGAAACATCTAGCTTTTGAT+TGG | - | chr5.4:18553888-18553907 | MS.gene98436:intron | 30.0% |
| !!! | TTTTTTCTTTCATAGTGGCA+TGG | - | chr5.4:18554176-18554195 | MS.gene98436:intron | 30.0% |
| !!! | TTTTTTTGTTCGTGGATAAC+TGG | - | chr5.4:18554307-18554326 | MS.gene98436:intron | 30.0% |
| AAAGTGACAATGACAATGAG+TGG | + | chr5.4:18556808-18556827 | None:intergenic | 35.0% | |
| AAATCGGAGGAAAATGACAA+CGG | - | chr5.4:18552506-18552525 | MS.gene98436:intron | 35.0% | |
| AACTTGTACAATCCTAAGTG+TGG | - | chr5.4:18553489-18553508 | MS.gene98436:intron | 35.0% | |
| AAGATATCCTTGAGAGCTTA+TGG | + | chr5.4:18553122-18553141 | None:intergenic | 35.0% | |
| AAGTTGACAACCGTAAAAAG+AGG | + | chr5.4:18556052-18556071 | None:intergenic | 35.0% | |
| AGATTTAAGTGACCAATAGC+AGG | + | chr5.4:18554453-18554472 | None:intergenic | 35.0% | |
| AGTTCATCTTAGTAGCTTCA+TGG | + | chr5.4:18557304-18557323 | None:intergenic | 35.0% | |
| ATATAGGAGTCCAAGCTTTA+TGG | - | chr5.4:18557365-18557384 | MS.gene98436:CDS | 35.0% | |
| ATCCTGGATGAAAAAAAGGA+AGG | + | chr5.4:18555092-18555111 | None:intergenic | 35.0% | |
| ATGAACACAGAATCAAAGGT+AGG | + | chr5.4:18556022-18556041 | None:intergenic | 35.0% | |
| CAAATCACTGCACTAAAATC+TGG | - | chr5.4:18554918-18554937 | MS.gene98436:intron | 35.0% | |
| CAAGGACCTAGAACAAAAAA+TGG | + | chr5.4:18555488-18555507 | None:intergenic | 35.0% | |
| CATGCAAATAGTTGAGGTAT+TGG | - | chr5.4:18555930-18555949 | MS.gene98436:intron | 35.0% | |
| CCAAATTTCAAAAGATCGTC+TGG | + | chr5.4:18557213-18557232 | None:intergenic | 35.0% | |
| CCACAAAAGATACTTCTTGT+AGG | + | chr5.4:18555171-18555190 | None:intergenic | 35.0% | |
| CCCAAAAGAAAACACGAAAA+CGG | - | chr5.4:18552419-18552438 | MS.gene98436:intron | 35.0% | |
| CCTCTCTCATATGAATGAAT+GGG | - | chr5.4:18557126-18557145 | MS.gene98436:CDS | 35.0% | |
| CGTAGGAATGAAAATTGGAA+AGG | - | chr5.4:18554123-18554142 | MS.gene98436:intron | 35.0% | |
| CTATAACTTCAAAAGGGAGA+AGG | + | chr5.4:18556655-18556674 | None:intergenic | 35.0% | |
| CTCAGAAGAAATTAGAAGGA+AGG | + | chr5.4:18555637-18555656 | None:intergenic | 35.0% | |
| CTGAAAACAGCATATGAACA+TGG | + | chr5.4:18553092-18553111 | None:intergenic | 35.0% | |
| CTGAATGAACACAGAATCAA+AGG | + | chr5.4:18556026-18556045 | None:intergenic | 35.0% | |
| GAAAATTGGAAAGGGGAAAA+TGG | - | chr5.4:18554132-18554151 | MS.gene98436:intron | 35.0% | |
| GAATGTGCTTGAATGTTGTA+AGG | - | chr5.4:18552640-18552659 | MS.gene98436:intron | 35.0% | |
| GACTGTCTTAAATTTCCAAC+TGG | - | chr5.4:18554696-18554715 | MS.gene98436:intron | 35.0% | |
| GCCAAAAACTATGTATGAAC+TGG | - | chr5.4:18556461-18556480 | MS.gene98436:intron | 35.0% | |
| GGTTATAACATTCCATTGGA+GGG | + | chr5.4:18554534-18554553 | None:intergenic | 35.0% | |
| TAAAGAGGTTTGAGGATTCA+GGG | - | chr5.4:18552609-18552628 | MS.gene98436:intron | 35.0% | |
| TAAATAATGTCTTCAGGGGT+TGG | - | chr5.4:18556298-18556317 | MS.gene98436:intron | 35.0% | |
| TACAAGTTACGGTTACATTC+TGG | - | chr5.4:18554995-18555014 | MS.gene98436:intron | 35.0% | |
| TCACTTAGCTCAGGAATTTA+TGG | - | chr5.4:18555779-18555798 | MS.gene98436:intron | 35.0% | |
| TCCTCTCTCATATGAATGAA+TGG | - | chr5.4:18557125-18557144 | MS.gene98436:CDS | 35.0% | |
| TCGTGATTTGATTGGAATTG+CGG | - | chr5.4:18552718-18552737 | MS.gene98436:intron | 35.0% | |
| TCGTTATACGTGTTATAAGC+AGG | + | chr5.4:18555452-18555471 | None:intergenic | 35.0% | |
| TGATGTCATGCAAATAGTTG+AGG | - | chr5.4:18555924-18555943 | MS.gene98436:intron | 35.0% | |
| TGCTTCGTAGGAATGAAAAT+TGG | - | chr5.4:18554118-18554137 | MS.gene98436:intron | 35.0% | |
| TGGAGAAAATGCTTCAACAA+GGG | - | chr5.4:18556152-18556171 | MS.gene98436:CDS | 35.0% | |
| TGGCACACATGTTAAGAAAA+AGG | - | chr5.4:18557230-18557249 | MS.gene98436:CDS | 35.0% | |
| TGGTTATAACATTCCATTGG+AGG | + | chr5.4:18554535-18554554 | None:intergenic | 35.0% | |
| TTCATCCAGGATATTGTCAT+TGG | - | chr5.4:18555100-18555119 | MS.gene98436:intron | 35.0% | |
| TTCTTTCCAGTAACCACAAT+CGG | + | chr5.4:18552563-18552582 | None:intergenic | 35.0% | |
| TTGATCACTACTTCAACATC+TGG | + | chr5.4:18556905-18556924 | None:intergenic | 35.0% | |
| ! | AGTCTGTCCATTGTTTGTTA+AGG | + | chr5.4:18556732-18556751 | None:intergenic | 35.0% |
| ! | AGTGATTTGTGGTTGTTTGT+TGG | + | chr5.4:18554907-18554926 | None:intergenic | 35.0% |
| ! | AGTTCTTCCTTTCCTTTTGT+TGG | - | chr5.4:18554956-18554975 | MS.gene98436:intron | 35.0% |
| ! | ATCAGCAATAACTTGTAACC+AGG | + | chr5.4:18556250-18556269 | None:intergenic | 35.0% |
| ! | ATTGTTTGTTAAGGACCAAG+GGG | + | chr5.4:18556723-18556742 | None:intergenic | 35.0% |
| ! | ATTTTCAACAGCTCGTCAAA+TGG | - | chr5.4:18555722-18555741 | MS.gene98436:intron | 35.0% |
| ! | CATTCAGTTGCCTCTTTTTA+CGG | - | chr5.4:18556039-18556058 | MS.gene98436:intron | 35.0% |
| ! | CATTGTTTGTTAAGGACCAA+GGG | + | chr5.4:18556724-18556743 | None:intergenic | 35.0% |
| ! | CCGTTTTCGTGTTTTCTTTT+GGG | + | chr5.4:18552422-18552441 | None:intergenic | 35.0% |
| ! | GAATCAGTTTGTTTGTATGG+TGG | - | chr5.4:18554879-18554898 | MS.gene98436:CDS | 35.0% |
| ! | GAGTTCTGTGTTGTTGTTAA+GGG | + | chr5.4:18552351-18552370 | None:intergenic | 35.0% |
| ! | GATACATACTTTTACAGGGT+TGG | + | chr5.4:18555808-18555827 | None:intergenic | 35.0% |
| ! | GTGGAATCAGTTTGTTTGTA+TGG | - | chr5.4:18554876-18554895 | MS.gene98436:CDS | 35.0% |
| ! | TATAGGAGTCCAAGCTTTAT+GGG | - | chr5.4:18557366-18557385 | MS.gene98436:CDS | 35.0% |
| ! | TGAGTTCTGTGTTGTTGTTA+AGG | + | chr5.4:18552352-18552371 | None:intergenic | 35.0% |
| ! | TTGTTGTTAAGGGTTTGTTC+TGG | + | chr5.4:18552341-18552360 | None:intergenic | 35.0% |
| ! | TTTTACACTCTCACAACAGT+TGG | + | chr5.4:18553362-18553381 | None:intergenic | 35.0% |
| ! | TTTTTATCCAAATAGGGCCT+CGG | - | chr5.4:18553236-18553255 | MS.gene98436:intron | 35.0% |
| !! | ATTTTATTTGGTTGGCTCAC+TGG | - | chr5.4:18555254-18555273 | MS.gene98436:intron | 35.0% |
| !! | GATTTTAGTGCAGTGATTTG+TGG | + | chr5.4:18554918-18554937 | None:intergenic | 35.0% |
| !! | GCTTTTGATTGGGAAGAAAA+TGG | - | chr5.4:18553899-18553918 | MS.gene98436:intron | 35.0% |
| !! | TTAATTTTGGTCTGCTTCGT+AGG | - | chr5.4:18554106-18554125 | MS.gene98436:intron | 35.0% |
| !! | TTTTATTTGGTTGGCTCACT+GGG | - | chr5.4:18555255-18555274 | MS.gene98436:intron | 35.0% |
| !!! | AGGCATACTTTTGAGATTTG+TGG | + | chr5.4:18556002-18556021 | None:intergenic | 35.0% |
| !!! | ATACATAGTTTTTGGCTTCC+AGG | + | chr5.4:18556457-18556476 | None:intergenic | 35.0% |
| !!! | ATCCACTTTTTTATTCCCCT+TGG | - | chr5.4:18556705-18556724 | MS.gene98436:intron | 35.0% |
| !!! | CCAGACGATCTTTTGAAATT+TGG | - | chr5.4:18557210-18557229 | MS.gene98436:CDS | 35.0% |
| !!! | CCTACAAGAAGTATCTTTTG+TGG | - | chr5.4:18555168-18555187 | MS.gene98436:intron | 35.0% |
| !!! | TACATAGTTTTTGGCTTCCA+GGG | + | chr5.4:18556456-18556475 | None:intergenic | 35.0% |
| !!! | TTCCTTCCTTTTTTTCATCC+AGG | - | chr5.4:18555087-18555106 | MS.gene98436:intron | 35.0% |
| AAATGGATCTAGTACCCAGT+TGG | + | chr5.4:18554714-18554733 | None:intergenic | 40.0% | |
| AACATCCTCTCTATTGGGTT+GGG | + | chr5.4:18554642-18554661 | None:intergenic | 40.0% | |
| AACCAGATCTTGAATACGAC+CGG | + | chr5.4:18555131-18555150 | None:intergenic | 40.0% | |
| AACTTGTGACAGGTTGTTGT+AGG | - | chr5.4:18555877-18555896 | MS.gene98436:intron | 40.0% | |
| ACGCTAGTGTTGCAATATAC+TGG | - | chr5.4:18555301-18555320 | MS.gene98436:intron | 40.0% | |
| AGGGATCCTGATATTATGAG+TGG | - | chr5.4:18553991-18554010 | MS.gene98436:CDS | 40.0% | |
| ATACTTGGTCAGACATGTTC+TGG | - | chr5.4:18555558-18555577 | MS.gene98436:intron | 40.0% | |
| ATGAATAAGCGGAAGAGCAA+GGG | - | chr5.4:18553584-18553603 | MS.gene98436:intron | 40.0% | |
| ATGTCTGACCAAGTATAGAG+CGG | + | chr5.4:18555554-18555573 | None:intergenic | 40.0% | |
| CAAATAGTCCGCTCTATACT+TGG | - | chr5.4:18555543-18555562 | MS.gene98436:intron | 40.0% | |
| CAACATTCAAGCACATTCTC+AGG | + | chr5.4:18552638-18552657 | None:intergenic | 40.0% | |
| CATATGAACATGGGCCTATT+TGG | + | chr5.4:18553082-18553101 | None:intergenic | 40.0% | |
| CCCATTCATTCATATGAGAG+AGG | + | chr5.4:18557129-18557148 | None:intergenic | 40.0% | |
| CCTTGGTCCTTAACAAACAA+TGG | - | chr5.4:18556722-18556741 | MS.gene98436:intron | 40.0% | |
| CTTATGTCCATAAGCTCTCA+AGG | - | chr5.4:18553112-18553131 | MS.gene98436:intron | 40.0% | |
| CTTTCTCAGGAATCGAGTAT+TGG | - | chr5.4:18556096-18556115 | MS.gene98436:intron | 40.0% | |
| GACCAAGGGGAATAAAAAAG+TGG | + | chr5.4:18556710-18556729 | None:intergenic | 40.0% | |
| GAGTTCCAATGACAATATCC+TGG | + | chr5.4:18555108-18555127 | None:intergenic | 40.0% | |
| GATATTGTCATTGGAACTCC+CGG | - | chr5.4:18555109-18555128 | MS.gene98436:intron | 40.0% | |
| GATTGGGAAGAAAATGGCAA+GGG | - | chr5.4:18553905-18553924 | MS.gene98436:intron | 40.0% | |
| GCGAGCACAAGTATGATAAA+AGG | + | chr5.4:18554429-18554448 | None:intergenic | 40.0% | |
| GCTAAGTGATGAACTGCTAA+CGG | + | chr5.4:18555768-18555787 | None:intergenic | 40.0% | |
| GGCCAAGTTCATAGAAGTAA+AGG | + | chr5.4:18553834-18553853 | None:intergenic | 40.0% | |
| GGGATCCTGATATTATGAGT+GGG | - | chr5.4:18553992-18554011 | MS.gene98436:CDS | 40.0% | |
| GTAAAGAGGTTTGAGGATTC+AGG | - | chr5.4:18552608-18552627 | MS.gene98436:intron | 40.0% | |
| GTGGAGAAAATGCTTCAACA+AGG | - | chr5.4:18556151-18556170 | MS.gene98436:CDS | 40.0% | |
| TAACATCCTCTCTATTGGGT+TGG | + | chr5.4:18554643-18554662 | None:intergenic | 40.0% | |
| TAGCCTTCCCTTGATACAAA+AGG | - | chr5.4:18554356-18554375 | MS.gene98436:intron | 40.0% | |
| TATGAATAAGCGGAAGAGCA+AGG | - | chr5.4:18553583-18553602 | MS.gene98436:intron | 40.0% | |
| TCACGACCATCCAACAAAAA+CGG | + | chr5.4:18552704-18552723 | None:intergenic | 40.0% | |
| TCAGATGTATTGTGTGATGC+TGG | - | chr5.4:18554840-18554859 | MS.gene98436:CDS | 40.0% | |
| TGATTGGGAAACAAACGACA+CGG | - | chr5.4:18553948-18553967 | MS.gene98436:intron | 40.0% | |
| TGATTGGGAAGAAAATGGCA+AGG | - | chr5.4:18553904-18553923 | MS.gene98436:intron | 40.0% | |
| TGGAAAGCAGTGTCTATAAG+TGG | - | chr5.4:18556318-18556337 | MS.gene98436:intron | 40.0% | |
| TGGACAGACTAGTGACTATT+AGG | - | chr5.4:18556742-18556761 | MS.gene98436:intron | 40.0% | |
| TGGTTATGTTCAGTGCTACA+TGG | - | chr5.4:18555742-18555761 | MS.gene98436:intron | 40.0% | |
| TGTACAAATGGGAAACCACA+CGG | - | chr5.4:18556128-18556147 | MS.gene98436:CDS | 40.0% | |
| TGTGATGCTGGTAAATCTTG+TGG | - | chr5.4:18554852-18554871 | MS.gene98436:CDS | 40.0% | |
| TTGGATGGTCGTGATTTGAT+TGG | - | chr5.4:18552710-18552729 | MS.gene98436:intron | 40.0% | |
| ! | ATAGGAGTCCAAGCTTTATG+GGG | - | chr5.4:18557367-18557386 | MS.gene98436:CDS | 40.0% |
| ! | ATGAACTTGGCCTTTCTCTT+TGG | - | chr5.4:18553842-18553861 | MS.gene98436:CDS | 40.0% |
| ! | CAACCTTTTGTATCAAGGGA+AGG | + | chr5.4:18554362-18554381 | None:intergenic | 40.0% |
| ! | CCATTGTTTGTTAAGGACCA+AGG | + | chr5.4:18556725-18556744 | None:intergenic | 40.0% |
| ! | GAAAAAGCACAACAAATCGG+AGG | - | chr5.4:18552493-18552512 | MS.gene98436:intron | 40.0% |
| ! | GAATATTTCAGGGACTTGCT+GGG | - | chr5.4:18557148-18557167 | MS.gene98436:CDS | 40.0% |
| ! | GTTAAGGGTTTGTTCTGGTT+CGG | + | chr5.4:18552336-18552355 | None:intergenic | 40.0% |
| !! | AATATTTCAGGGACTTGCTG+GGG | - | chr5.4:18557149-18557168 | MS.gene98436:CDS | 40.0% |
| !! | ATATACCTGGTGAAAGTACC+TGG | - | chr5.4:18556229-18556248 | MS.gene98436:intron | 40.0% |
| !! | GCCGTTTTCGTGTTTTCTTT+TGG | + | chr5.4:18552423-18552442 | None:intergenic | 40.0% |
| !! | TTAGACTTTGGAGCATCAAC+AGG | + | chr5.4:18557410-18557429 | None:intergenic | 40.0% |
| !! | TTCTGGTTCGGTGGATAAAA+CGG | + | chr5.4:18552324-18552343 | None:intergenic | 40.0% |
| AAGAGCAAGGGTTCTTCCAA+GGG | - | chr5.4:18553596-18553615 | MS.gene98436:CDS | 45.0% | |
| ACCAGATCTTGAATACGACC+GGG | + | chr5.4:18555130-18555149 | None:intergenic | 45.0% | |
| AGAAATACACGGCGGTAAAG+AGG | - | chr5.4:18552594-18552613 | MS.gene98436:intron | 45.0% | |
| AGCAGTTCATCACTTAGCTC+AGG | - | chr5.4:18555770-18555789 | MS.gene98436:intron | 45.0% | |
| AGGTCCTTGATGAAGCAGAT+CGG | - | chr5.4:18555499-18555518 | MS.gene98436:intron | 45.0% | |
| AGTTATACCTCTCCCTCCAA+TGG | - | chr5.4:18554519-18554538 | MS.gene98436:intron | 45.0% | |
| CTGCAATACTTTGGCCATGT+TGG | - | chr5.4:18556521-18556540 | MS.gene98436:intron | 45.0% | |
| GAAAATGGCAAGGGAATGAG+TGG | - | chr5.4:18553914-18553933 | MS.gene98436:intron | 45.0% | |
| GAACATGGGCCTATTTGGAT+TGG | + | chr5.4:18553077-18553096 | None:intergenic | 45.0% | |
| GAATGGAAGCTGTCCTTTGA+TGG | - | chr5.4:18556386-18556405 | MS.gene98436:intron | 45.0% | |
| GATGAACCGATTGTGGTTAC+TGG | - | chr5.4:18552554-18552573 | MS.gene98436:CDS | 45.0% | |
| GATTGGGAAACAAACGACAC+GGG | - | chr5.4:18553949-18553968 | MS.gene98436:intron | 45.0% | |
| GGAATATTTCAGGGACTTGC+TGG | - | chr5.4:18557147-18557166 | MS.gene98436:CDS | 45.0% | |
| GTACAAATGGGAAACCACAC+GGG | - | chr5.4:18556129-18556148 | MS.gene98436:CDS | 45.0% | |
| GTCAGGTCAGTTTGGTACTT+TGG | - | chr5.4:18552748-18552767 | MS.gene98436:CDS | 45.0% | |
| GTGGTTACTGGAAAGAATGC+CGG | - | chr5.4:18552566-18552585 | MS.gene98436:CDS | 45.0% | |
| TAACATTCCATTGGAGGGAG+AGG | + | chr5.4:18554529-18554548 | None:intergenic | 45.0% | |
| TGATTGGAATTGCGGCAACT+GGG | - | chr5.4:18552726-18552745 | MS.gene98436:intron | 45.0% | |
| TGCCGGAGATGAGAAATACA+CGG | - | chr5.4:18552583-18552602 | MS.gene98436:CDS | 45.0% | |
| TGCTGGTAAATCTTGTGGTG+TGG | - | chr5.4:18554857-18554876 | MS.gene98436:CDS | 45.0% | |
| TGTAACCAGGTACTTTCACC+AGG | + | chr5.4:18556237-18556256 | None:intergenic | 45.0% | |
| TTGATTGGAATTGCGGCAAC+TGG | - | chr5.4:18552725-18552744 | MS.gene98436:intron | 45.0% | |
| ! | CTAGGGAAGACACTTGCTTT+TGG | - | chr5.4:18553539-18553558 | MS.gene98436:intron | 45.0% |
| !! | ATCATATCAGTTTGCTGCCC+TGG | - | chr5.4:18556436-18556455 | MS.gene98436:intron | 45.0% |
| !!! | GTGAACGTTTTGAGAGAAGC+AGG | - | chr5.4:18557177-18557196 | MS.gene98436:CDS | 45.0% |
| !!! | TTCGGCGTCGTTTTGAAGAT+TGG | + | chr5.4:18552450-18552469 | None:intergenic | 45.0% |
| !! | ATAAAACTAATAAATAAAAT+AGG | + | chr5.4:18553733-18553752 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTAAAACAAA+GGG | - | chr5.4:18554083-18554102 | MS.gene98436:intron | 5.0% |
| !!! | TTTTTTTTTTTTTAAAACAA+AGG | - | chr5.4:18554082-18554101 | MS.gene98436:intron | 5.0% |
| ACAGGTTGTTGTAGGCTCAG+AGG | - | chr5.4:18555885-18555904 | MS.gene98436:intron | 50.0% | |
| ACTCTCCCAACCCAATAGAG+AGG | - | chr5.4:18554634-18554653 | MS.gene98436:CDS | 50.0% | |
| ACTGGACGAGCTGGTAAGAA+AGG | - | chr5.4:18556974-18556993 | MS.gene98436:intron | 50.0% | |
| AGCAGATCGGATGCTTGACA+TGG | - | chr5.4:18555512-18555531 | MS.gene98436:intron | 50.0% | |
| ATCACAGCATGAGCGCACAA+AGG | - | chr5.4:18556347-18556366 | MS.gene98436:intron | 50.0% | |
| CAAACGACACGGGAATGAGT+TGG | - | chr5.4:18553959-18553978 | MS.gene98436:CDS | 50.0% | |
| CATGTGGCAACTGTCTATCC+AGG | + | chr5.4:18555374-18555393 | None:intergenic | 50.0% | |
| CCTTATGCTCTCTCCTACGA+GGG | - | chr5.4:18553634-18553653 | MS.gene98436:CDS | 50.0% | |
| CGCCGTGTATTTCTCATCTC+CGG | + | chr5.4:18552588-18552607 | None:intergenic | 50.0% | |
| CGGAGATGAGAAATACACGG+CGG | - | chr5.4:18552586-18552605 | MS.gene98436:CDS | 50.0% | |
| CTCCGATTCAATCACGTGCT+TGG | - | chr5.4:18552678-18552697 | MS.gene98436:intron | 50.0% | |
| CTCTATACCGAGGCCCTATT+TGG | + | chr5.4:18553246-18553265 | None:intergenic | 50.0% | |
| GAAGAGCAAGGGTTCTTCCA+AGG | - | chr5.4:18553595-18553614 | MS.gene98436:CDS | 50.0% | |
| GAAGTGAGCCCCATAAAGCT+TGG | + | chr5.4:18557378-18557397 | None:intergenic | 50.0% | |
| GCACGTGATTGAATCGGAGA+AGG | + | chr5.4:18552677-18552696 | None:intergenic | 50.0% | |
| GCAGATCGGATGCTTGACAT+GGG | - | chr5.4:18555513-18555532 | MS.gene98436:intron | 50.0% | |
| GCATCCGATCTGCTTCATCA+AGG | + | chr5.4:18555506-18555525 | None:intergenic | 50.0% | |
| GCTTTATGGGGCTCACTTCA+AGG | - | chr5.4:18557379-18557398 | MS.gene98436:CDS | 50.0% | |
| GGCCAAGCACGTGATTGAAT+CGG | + | chr5.4:18552683-18552702 | None:intergenic | 50.0% | |
| GTTCATAGAATTGGGCGGAC+TGG | - | chr5.4:18556956-18556975 | MS.gene98436:intron | 50.0% | |
| TCCCGGTCGTATTCAAGATC+TGG | - | chr5.4:18555126-18555145 | MS.gene98436:intron | 50.0% | |
| TCGGAGGAAAATGACAACGG+CGG | - | chr5.4:18552509-18552528 | MS.gene98436:intron | 50.0% | |
| TGGGCAGATTGCTACTGATG+TGG | - | chr5.4:18556859-18556878 | MS.gene98436:intron | 50.0% | |
| ! | AAGCATTTTCTCCACCCGTG+TGG | + | chr5.4:18556146-18556165 | None:intergenic | 50.0% |
| ! | GGAGAGAGCATAAGGCAAAG+AGG | + | chr5.4:18553629-18553648 | None:intergenic | 50.0% |
| !! | AAGGGTTTGTTCTGGTTCGG+TGG | + | chr5.4:18552333-18552352 | None:intergenic | 50.0% |
| !!! | ACGTGCTTGGCCGTTTTTGT+TGG | - | chr5.4:18552691-18552710 | MS.gene98436:intron | 50.0% |
| !!! | GCTTGGCCGTTTTTGTTGGA+TGG | - | chr5.4:18552695-18552714 | MS.gene98436:intron | 50.0% |
| CAAATGGGAAACCACACGGG+TGG | - | chr5.4:18556132-18556151 | MS.gene98436:CDS | 55.0% | |
| CACGGCGGTAAAGAGGTTTG+AGG | - | chr5.4:18552601-18552620 | MS.gene98436:intron | 55.0% | |
| GCAAAGAGGATTCCGACCCT+TGG | + | chr5.4:18553615-18553634 | None:intergenic | 55.0% | |
| GCAACTGGGTCAGGTCAGTT+TGG | - | chr5.4:18552740-18552759 | MS.gene98436:CDS | 55.0% | |
| GCAAGGGTTCTTCCAAGGGT+CGG | - | chr5.4:18553600-18553619 | MS.gene98436:CDS | 55.0% | |
| GCCTTATGCTCTCTCCTACG+AGG | - | chr5.4:18553633-18553652 | MS.gene98436:CDS | 55.0% | |
| TGACAACGGCGGTGATGTGT+CGG | - | chr5.4:18552520-18552539 | MS.gene98436:CDS | 55.0% | |
| TGATGTGGCTGCACGAGGAT+TGG | - | chr5.4:18556874-18556893 | MS.gene98436:intron | 55.0% | |
| TGTTGAGCTAGCTCCCTCGT+AGG | + | chr5.4:18553650-18553669 | None:intergenic | 55.0% | |
| ! | CCCTCGTAGGAGAGAGCATA+AGG | + | chr5.4:18553637-18553656 | None:intergenic | 55.0% |
| !! | TGATGTGTCGGTTTCGGCGT+CGG | - | chr5.4:18552532-18552551 | MS.gene98436:CDS | 55.0% |
| CTTGTGCTCGCGCCTGCTAT+TGG | - | chr5.4:18554438-18554457 | MS.gene98436:intron | 60.0% | |
| GCTACTGATGTGGCTGCACG+AGG | - | chr5.4:18556869-18556888 | MS.gene98436:intron | 60.0% | |
| GGAATTGCGGCAACTGGGTC+AGG | - | chr5.4:18552731-18552750 | MS.gene98436:intron | 60.0% | |
| ! | GGCGTCGGATGAACCGATTG+TGG | - | chr5.4:18552547-18552566 | MS.gene98436:CDS | 60.0% |
| !! | CGGCGGTGATGTGTCGGTTT+CGG | - | chr5.4:18552526-18552545 | MS.gene98436:CDS | 60.0% |
| !! | ATTGGGCGGACTGGACGAGC+TGG | - | chr5.4:18556965-18556984 | MS.gene98436:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18552302 | 18557466 | 18552302 | ID=MS.gene98436 |
| chr5.4 | mRNA | 18552302 | 18557466 | 18552302 | ID=MS.gene98436.t1;Parent=MS.gene98436 |
| chr5.4 | exon | 18557016 | 18557466 | 18557016 | ID=MS.gene98436.t1.exon1;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18557016 | 18557466 | 18557016 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18556098 | 18556225 | 18556098 | ID=MS.gene98436.t1.exon2;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18556098 | 18556225 | 18556098 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18554824 | 18554931 | 18554824 | ID=MS.gene98436.t1.exon3;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18554824 | 18554931 | 18554824 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18554579 | 18554659 | 18554579 | ID=MS.gene98436.t1.exon4;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18554579 | 18554659 | 18554579 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18554189 | 18554267 | 18554189 | ID=MS.gene98436.t1.exon5;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18554189 | 18554267 | 18554189 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18553950 | 18554035 | 18553950 | ID=MS.gene98436.t1.exon6;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18553950 | 18554035 | 18553950 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18553841 | 18553879 | 18553841 | ID=MS.gene98436.t1.exon7;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18553841 | 18553879 | 18553841 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18553755 | 18553810 | 18553755 | ID=MS.gene98436.t1.exon8;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18553755 | 18553810 | 18553755 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18553595 | 18553663 | 18553595 | ID=MS.gene98436.t1.exon9;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18553595 | 18553663 | 18553595 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18553361 | 18553454 | 18553361 | ID=MS.gene98436.t1.exon10;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18553361 | 18553454 | 18553361 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18552738 | 18552902 | 18552738 | ID=MS.gene98436.t1.exon11;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18552738 | 18552902 | 18552738 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18552517 | 18552609 | 18552517 | ID=MS.gene98436.t1.exon12;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18552517 | 18552609 | 18552517 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| chr5.4 | exon | 18552302 | 18552397 | 18552302 | ID=MS.gene98436.t1.exon13;Parent=MS.gene98436.t1 |
| chr5.4 | CDS | 18552302 | 18552397 | 18552302 | ID=cds.MS.gene98436.t1;Parent=MS.gene98436.t1 |
| Gene Sequence |
| Protein sequence |
