Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068296.t1 | XP_013441900.1 | 97.4 | 191 | 5 | 0 | 1 | 191 | 1 | 191 | 5.70E-102 | 380.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068296.t1 | Q9C891 | 51.9 | 187 | 85 | 3 | 7 | 190 | 3 | 187 | 9.1e-48 | 191.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068296.t1 | G7JKK5 | 97.4 | 191 | 5 | 0 | 1 | 191 | 1 | 191 | 4.1e-102 | 380.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049611 | MS.gene068296 | 0.818615 | 1.79E-52 | -1.69E-46 |
| MS.gene050096 | MS.gene068296 | 0.803563 | 3.28E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene068296 | 0.84586 | 3.12E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene068296 | 0.851913 | 6.51E-61 | -1.69E-46 |
| MS.gene050809 | MS.gene068296 | 0.819328 | 1.23E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene068296 | 0.833921 | 4.04E-56 | -1.69E-46 |
| MS.gene051127 | MS.gene068296 | 0.828561 | 8.40E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene068296 | 0.807149 | 5.82E-50 | -1.69E-46 |
| MS.gene051632 | MS.gene068296 | 0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene051863 | MS.gene068296 | 0.800311 | 1.53E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene068296 | 0.812303 | 4.54E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene068296 | 0.84353 | 1.32E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene068296 | 0.800527 | 1.38E-48 | -1.69E-46 |
| MS.gene054708 | MS.gene068296 | 0.801447 | 8.96E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene068296 | 0.809573 | 1.77E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene068296 | 0.87521 | 3.69E-68 | -1.69E-46 |
| MS.gene055154 | MS.gene068296 | 0.830827 | 2.36E-55 | -1.69E-46 |
| MS.gene055959 | MS.gene068296 | 0.878566 | 2.53E-69 | -1.69E-46 |
| MS.gene056313 | MS.gene068296 | 0.838328 | 3.07E-57 | -1.69E-46 |
| MS.gene056359 | MS.gene068296 | 0.809152 | 2.18E-50 | -1.69E-46 |
| MS.gene056422 | MS.gene068296 | -0.810713 | 1.01E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene068296 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene068296 | 0.832181 | 1.09E-55 | -1.69E-46 |
| MS.gene057544 | MS.gene068296 | 0.827658 | 1.39E-54 | -1.69E-46 |
| MS.gene058067 | MS.gene068296 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene058093 | MS.gene068296 | 0.898103 | 7.36E-77 | -1.69E-46 |
| MS.gene058099 | MS.gene068296 | 0.851489 | 8.58E-61 | -1.69E-46 |
| MS.gene058108 | MS.gene068296 | 0.832353 | 9.92E-56 | -1.69E-46 |
| MS.gene058109 | MS.gene068296 | 0.85263 | 4.07E-61 | -1.69E-46 |
| MS.gene058171 | MS.gene068296 | 0.835295 | 1.82E-56 | -1.69E-46 |
| MS.gene058173 | MS.gene068296 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene058175 | MS.gene068296 | 0.835939 | 1.25E-56 | -1.69E-46 |
| MS.gene058176 | MS.gene068296 | 0.851445 | 8.84E-61 | -1.69E-46 |
| MS.gene058177 | MS.gene068296 | 0.817074 | 3.98E-52 | -1.69E-46 |
| MS.gene058179 | MS.gene068296 | 0.890586 | 8.61E-74 | -1.69E-46 |
| MS.gene058180 | MS.gene068296 | 0.871951 | 4.62E-67 | -1.69E-46 |
| MS.gene058840 | MS.gene068296 | 0.855932 | 4.53E-62 | -1.69E-46 |
| MS.gene059037 | MS.gene068296 | 0.889627 | 2.04E-73 | -1.69E-46 |
| MS.gene059038 | MS.gene068296 | 0.849233 | 3.69E-60 | -1.69E-46 |
| MS.gene059044 | MS.gene068296 | 0.820305 | 7.36E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene068296 | 0.832675 | 8.26E-56 | -1.69E-46 |
| MS.gene059223 | MS.gene068296 | 0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene059690 | MS.gene068296 | 0.80784 | 4.15E-50 | -1.69E-46 |
| MS.gene059691 | MS.gene068296 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene068296 | 0.813996 | 1.93E-51 | -1.69E-46 |
| MS.gene059697 | MS.gene068296 | 0.821059 | 4.94E-53 | -1.69E-46 |
| MS.gene060205 | MS.gene068296 | 0.805971 | 1.03E-49 | -1.69E-46 |
| MS.gene060578 | MS.gene068296 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene068296 | 0.832565 | 8.79E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068296.t1 | MTR_4g013385 | 97.382 | 191 | 5 | 0 | 1 | 191 | 1 | 191 | 6.43e-140 | 388 |
| MS.gene068296.t1 | MTR_0433s0040 | 97.382 | 191 | 5 | 0 | 1 | 191 | 1 | 191 | 6.43e-140 | 388 |
| MS.gene068296.t1 | MTR_4g013355 | 68.947 | 190 | 48 | 2 | 3 | 191 | 1 | 180 | 3.50e-92 | 267 |
| MS.gene068296.t1 | MTR_4g013770 | 66.477 | 176 | 57 | 1 | 17 | 190 | 16 | 191 | 1.74e-82 | 243 |
| MS.gene068296.t1 | MTR_4g013345 | 60.989 | 182 | 66 | 3 | 14 | 190 | 15 | 196 | 1.83e-75 | 225 |
| MS.gene068296.t1 | MTR_4g013350 | 60.656 | 183 | 66 | 3 | 14 | 190 | 15 | 197 | 2.88e-74 | 222 |
| MS.gene068296.t1 | MTR_4g013320 | 60.870 | 184 | 64 | 4 | 15 | 190 | 16 | 199 | 1.47e-72 | 218 |
| MS.gene068296.t1 | MTR_7g070390 | 59.043 | 188 | 74 | 1 | 6 | 190 | 5 | 192 | 7.69e-72 | 216 |
| MS.gene068296.t1 | MTR_4g013330 | 59.239 | 184 | 67 | 4 | 15 | 190 | 16 | 199 | 3.11e-71 | 214 |
| MS.gene068296.t1 | MTR_4g013335 | 56.354 | 181 | 73 | 3 | 15 | 190 | 17 | 196 | 1.35e-69 | 210 |
| MS.gene068296.t1 | MTR_4g013325 | 64.138 | 145 | 51 | 1 | 47 | 190 | 55 | 199 | 3.11e-66 | 202 |
| MS.gene068296.t1 | MTR_4g013310 | 55.435 | 184 | 72 | 5 | 15 | 190 | 16 | 197 | 3.26e-65 | 199 |
| MS.gene068296.t1 | MTR_1g054525 | 46.486 | 185 | 94 | 3 | 9 | 190 | 10 | 192 | 9.93e-57 | 177 |
| MS.gene068296.t1 | MTR_7g093850 | 41.489 | 188 | 107 | 3 | 6 | 190 | 7 | 194 | 6.95e-47 | 152 |
| MS.gene068296.t1 | MTR_7g093790 | 41.989 | 181 | 99 | 4 | 13 | 190 | 14 | 191 | 1.82e-46 | 151 |
| MS.gene068296.t1 | MTR_4g073950 | 45.098 | 153 | 82 | 1 | 40 | 190 | 40 | 192 | 2.58e-46 | 151 |
| MS.gene068296.t1 | MTR_7g093820 | 39.894 | 188 | 110 | 3 | 6 | 190 | 7 | 194 | 7.84e-46 | 150 |
| MS.gene068296.t1 | MTR_7g093830 | 40.571 | 175 | 101 | 3 | 19 | 190 | 19 | 193 | 3.71e-44 | 145 |
| MS.gene068296.t1 | MTR_1g056370 | 43.709 | 151 | 84 | 1 | 40 | 189 | 35 | 185 | 3.87e-42 | 140 |
| MS.gene068296.t1 | MTR_7g093870 | 41.358 | 162 | 77 | 3 | 41 | 190 | 38 | 193 | 2.18e-39 | 134 |
| MS.gene068296.t1 | MTR_5g096120 | 37.234 | 188 | 107 | 5 | 9 | 190 | 7 | 189 | 5.59e-38 | 129 |
| MS.gene068296.t1 | MTR_4g078885 | 36.313 | 179 | 112 | 2 | 14 | 191 | 9 | 186 | 5.85e-38 | 129 |
| MS.gene068296.t1 | MTR_3g034030 | 36.667 | 180 | 112 | 2 | 13 | 191 | 8 | 186 | 6.59e-38 | 129 |
| MS.gene068296.t1 | MTR_3g105640 | 41.558 | 154 | 83 | 3 | 42 | 190 | 37 | 188 | 1.18e-37 | 129 |
| MS.gene068296.t1 | MTR_3g105630 | 37.097 | 186 | 108 | 5 | 11 | 190 | 7 | 189 | 1.76e-36 | 125 |
| MS.gene068296.t1 | MTR_4g122130 | 34.211 | 152 | 99 | 1 | 40 | 190 | 29 | 180 | 4.16e-25 | 96.3 |
| MS.gene068296.t1 | MTR_4g122110 | 34.615 | 156 | 98 | 2 | 36 | 190 | 28 | 180 | 1.96e-24 | 94.7 |
| MS.gene068296.t1 | MTR_4g049550 | 31.618 | 136 | 92 | 1 | 42 | 176 | 29 | 164 | 6.91e-16 | 72.4 |
| MS.gene068296.t1 | MTR_4g049570 | 30.496 | 141 | 92 | 2 | 46 | 185 | 33 | 168 | 2.72e-15 | 70.5 |
| MS.gene068296.t1 | MTR_1g046490 | 38.462 | 91 | 55 | 1 | 77 | 167 | 121 | 210 | 6.99e-14 | 67.8 |
| MS.gene068296.t1 | MTR_1g046500 | 39.560 | 91 | 54 | 1 | 77 | 167 | 135 | 224 | 2.87e-13 | 66.6 |
| MS.gene068296.t1 | MTR_1g046800 | 40.000 | 90 | 53 | 1 | 78 | 167 | 136 | 224 | 2.92e-13 | 66.6 |
| MS.gene068296.t1 | MTR_1g115510 | 36.975 | 119 | 68 | 4 | 78 | 189 | 235 | 353 | 3.59e-12 | 64.3 |
| MS.gene068296.t1 | MTR_8g099135 | 32.353 | 136 | 68 | 5 | 50 | 169 | 37 | 164 | 1.84e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068296.t1 | AT1G55210 | 51.872 | 187 | 85 | 3 | 7 | 190 | 3 | 187 | 1.05e-63 | 195 |
| MS.gene068296.t1 | AT1G55210 | 51.872 | 187 | 85 | 3 | 7 | 190 | 3 | 187 | 1.05e-63 | 195 |
| MS.gene068296.t1 | AT1G58170 | 48.421 | 190 | 91 | 3 | 3 | 190 | 1 | 185 | 1.96e-63 | 194 |
| MS.gene068296.t1 | AT3G13650 | 53.801 | 171 | 76 | 2 | 21 | 190 | 18 | 186 | 3.99e-61 | 188 |
| MS.gene068296.t1 | AT5G49040 | 47.727 | 176 | 89 | 2 | 18 | 190 | 16 | 191 | 1.32e-55 | 174 |
| MS.gene068296.t1 | AT1G65870 | 45.695 | 151 | 81 | 1 | 40 | 189 | 39 | 189 | 2.55e-46 | 151 |
| MS.gene068296.t1 | AT5G42500 | 47.945 | 146 | 71 | 3 | 46 | 189 | 43 | 185 | 1.50e-44 | 146 |
| MS.gene068296.t1 | AT3G13660 | 59.829 | 117 | 47 | 0 | 74 | 190 | 9 | 125 | 2.32e-44 | 144 |
| MS.gene068296.t1 | AT5G42510 | 46.000 | 150 | 78 | 2 | 41 | 189 | 35 | 182 | 5.23e-44 | 145 |
| MS.gene068296.t1 | AT5G49030 | 45.614 | 171 | 88 | 3 | 18 | 185 | 16 | 184 | 6.07e-43 | 153 |
| MS.gene068296.t1 | AT3G13662 | 47.445 | 137 | 70 | 1 | 41 | 177 | 38 | 172 | 1.44e-41 | 138 |
| MS.gene068296.t1 | AT1G22900 | 44.667 | 150 | 80 | 2 | 41 | 189 | 46 | 193 | 5.18e-40 | 135 |
| MS.gene068296.t1 | AT2G21100 | 40.940 | 149 | 87 | 1 | 42 | 189 | 39 | 187 | 6.85e-39 | 132 |
| MS.gene068296.t1 | AT2G21100 | 40.940 | 149 | 87 | 1 | 42 | 189 | 39 | 187 | 6.85e-39 | 132 |
| MS.gene068296.t1 | AT3G58090 | 47.706 | 109 | 57 | 0 | 81 | 189 | 163 | 271 | 4.34e-34 | 122 |
| MS.gene068296.t1 | AT2G21110 | 37.748 | 151 | 89 | 1 | 45 | 190 | 36 | 186 | 3.42e-32 | 114 |
| MS.gene068296.t1 | AT4G38700 | 36.842 | 190 | 107 | 6 | 8 | 190 | 7 | 190 | 5.37e-31 | 112 |
| MS.gene068296.t1 | AT4G23690 | 32.847 | 137 | 86 | 4 | 37 | 169 | 32 | 166 | 1.30e-15 | 71.6 |
| MS.gene068296.t1 | AT4G11210 | 28.994 | 169 | 108 | 6 | 5 | 169 | 2 | 162 | 1.25e-13 | 66.2 |
| MS.gene068296.t1 | AT4G11190 | 30.370 | 135 | 88 | 3 | 39 | 169 | 30 | 162 | 2.03e-13 | 65.9 |
| MS.gene068296.t1 | AT4G11180 | 33.094 | 139 | 86 | 5 | 36 | 169 | 28 | 164 | 5.32e-12 | 62.0 |
Find 38 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTTCTTCTGAACAATTT+AGG | 0.169887 | 4.4:-86659272 | None:intergenic |
| ACCTCAATTGAGCTCAAAAT+TGG | 0.260472 | 4.4:+86659439 | MS.gene068296:CDS |
| TGGAAGCACAATTACTATCT+TGG | 0.342636 | 4.4:+86659556 | MS.gene068296:CDS |
| TTATTTGAAGGGAAATATAA+TGG | 0.360119 | 4.4:+86659536 | MS.gene068296:CDS |
| TTAGCCACTTTAGATTCTAT+TGG | 0.363260 | 4.4:+86659300 | MS.gene068296:CDS |
| AAGCTCAGTTTGTGCAGTAT+AGG | 0.391171 | 4.4:-86659486 | None:intergenic |
| ATCTATTGAGCCCACGAAAC+CGG | 0.426314 | 4.4:-86659249 | None:intergenic |
| GGAAGCACAATTACTATCTT+GGG | 0.437728 | 4.4:+86659557 | MS.gene068296:CDS |
| GGGTGTAACAAGAGAGGAGA+AGG | 0.466269 | 4.4:-86659199 | None:intergenic |
| ATGCAAAATTCATTATCATA+AGG | 0.474182 | 4.4:-86659514 | None:intergenic |
| AAGAAATGATGCTTATGAAA+AGG | 0.476165 | 4.4:+86659580 | MS.gene068296:CDS |
| AAATTGGTTGGAAGGGCTCA+AGG | 0.505137 | 4.4:+86659455 | MS.gene068296:CDS |
| ATGCCTGTGATTGGTGGAAG+TGG | 0.512180 | 4.4:+86659611 | MS.gene068296:CDS |
| ATAGACAACGCTTTGACCTC+AGG | 0.512795 | 4.4:+86659416 | MS.gene068296:CDS |
| TGAGCTCAAAATTGGTTGGA+AGG | 0.519356 | 4.4:+86659447 | MS.gene068296:CDS |
| CAATTGAGCTCAAAATTGGT+TGG | 0.529085 | 4.4:+86659443 | MS.gene068296:CDS |
| GTTGTGTTAAACTTCGGAAG+AGG | 0.543099 | 4.4:-86659371 | None:intergenic |
| CATGCCAATAGAATCTAAAG+TGG | 0.545838 | 4.4:-86659304 | None:intergenic |
| ACAAGATGAGACCGGTTTCG+TGG | 0.547240 | 4.4:+86659238 | MS.gene068296:CDS |
| GTTAGAGAAATGCCTGTGAT+TGG | 0.553503 | 4.4:+86659602 | MS.gene068296:CDS |
| GTGTTAAACTTCGGAAGAGG+TGG | 0.556530 | 4.4:-86659368 | None:intergenic |
| AAGTTTAACACAACTAACTT+CGG | 0.561635 | 4.4:+86659380 | MS.gene068296:CDS |
| AAGTTAGTTGTGTTAAACTT+CGG | 0.577434 | 4.4:-86659377 | None:intergenic |
| GAGCTCAAAATTGGTTGGAA+GGG | 0.580534 | 4.4:+86659448 | MS.gene068296:CDS |
| CAAGATGAGACCGGTTTCGT+GGG | 0.584549 | 4.4:+86659239 | MS.gene068296:CDS |
| AGTCCACTTCCACCAATCAC+AGG | 0.592137 | 4.4:-86659614 | None:intergenic |
| TGAGCTCAATTGAGGTCCTG+AGG | 0.592935 | 4.4:-86659432 | None:intergenic |
| AGAGAAATGCCTGTGATTGG+TGG | 0.594056 | 4.4:+86659605 | MS.gene068296:CDS |
| AATTGGTTGGAAGGGCTCAA+GGG | 0.595873 | 4.4:+86659456 | MS.gene068296:CDS |
| CTTGTGCTGTGACGATTGTG+AGG | 0.604169 | 4.4:-86659220 | None:intergenic |
| AGTTGTAGCATCTCCTGTAG+TGG | 0.622414 | 4.4:-86659687 | None:intergenic |
| GTCACAGCACAAGATGAGAC+CGG | 0.639527 | 4.4:+86659230 | MS.gene068296:CDS |
| TTGTGAGGGTGTAACAAGAG+AGG | 0.652546 | 4.4:-86659205 | None:intergenic |
| TATTGGCATGACGTAGTCAG+CGG | 0.668999 | 4.4:+86659317 | MS.gene068296:CDS |
| AGGTGGAACAATTTCTATCG+CGG | 0.671876 | 4.4:-86659351 | None:intergenic |
| TAACACAACTAACTTCGGTG+AGG | 0.681754 | 4.4:+86659385 | MS.gene068296:CDS |
| TGGAACAATTTCTATCGCGG+TGG | 0.688468 | 4.4:-86659348 | None:intergenic |
| TTGTGCTGTGACGATTGTGA+GGG | 0.694834 | 4.4:-86659219 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGCAAAATTCATTATCATA+AGG | - | chr4.4:86659517-86659536 | None:intergenic | 20.0% |
| !! | TTATTTGAAGGGAAATATAA+TGG | + | chr4.4:86659536-86659555 | MS.gene068296:CDS | 20.0% |
| !!! | ATGAATTTTGCATTATTTGA+AGG | + | chr4.4:86659524-86659543 | MS.gene068296:CDS | 20.0% |
| !!! | TGAATTTTGCATTATTTGAA+GGG | + | chr4.4:86659525-86659544 | MS.gene068296:CDS | 20.0% |
| ! | AAGAAATGATGCTTATGAAA+AGG | + | chr4.4:86659580-86659599 | MS.gene068296:CDS | 25.0% |
| ! | AAGTTAGTTGTGTTAAACTT+CGG | - | chr4.4:86659380-86659399 | None:intergenic | 25.0% |
| ! | AAGTTTAACACAACTAACTT+CGG | + | chr4.4:86659380-86659399 | MS.gene068296:CDS | 25.0% |
| TGTCTTCTTCTGAACAATTT+AGG | - | chr4.4:86659275-86659294 | None:intergenic | 30.0% | |
| ! | TTAGCCACTTTAGATTCTAT+TGG | + | chr4.4:86659300-86659319 | MS.gene068296:CDS | 30.0% |
| !! | TACTTTTTGAATACCACTAC+AGG | + | chr4.4:86659674-86659693 | MS.gene068296:CDS | 30.0% |
| !!! | GGACTTTTTAGATTTGCTAA+GGG | + | chr4.4:86659632-86659651 | MS.gene068296:CDS | 30.0% |
| !!! | TGGACTTTTTAGATTTGCTA+AGG | + | chr4.4:86659631-86659650 | MS.gene068296:CDS | 30.0% |
| ACCTCAATTGAGCTCAAAAT+TGG | + | chr4.4:86659439-86659458 | MS.gene068296:CDS | 35.0% | |
| CAATTGAGCTCAAAATTGGT+TGG | + | chr4.4:86659443-86659462 | MS.gene068296:CDS | 35.0% | |
| CATGCCAATAGAATCTAAAG+TGG | - | chr4.4:86659307-86659326 | None:intergenic | 35.0% | |
| ! | ACCAATTTTGAGCTCAATTG+AGG | - | chr4.4:86659443-86659462 | None:intergenic | 35.0% |
| ! | GGAAGCACAATTACTATCTT+GGG | + | chr4.4:86659557-86659576 | MS.gene068296:CDS | 35.0% |
| ! | TGGAAGCACAATTACTATCT+TGG | + | chr4.4:86659556-86659575 | MS.gene068296:CDS | 35.0% |
| AAGCTCAGTTTGTGCAGTAT+AGG | - | chr4.4:86659489-86659508 | None:intergenic | 40.0% | |
| AGGTGGAACAATTTCTATCG+CGG | - | chr4.4:86659354-86659373 | None:intergenic | 40.0% | |
| GAGCTCAAAATTGGTTGGAA+GGG | + | chr4.4:86659448-86659467 | MS.gene068296:CDS | 40.0% | |
| GTTAGAGAAATGCCTGTGAT+TGG | + | chr4.4:86659602-86659621 | MS.gene068296:CDS | 40.0% | |
| GTTGTGTTAAACTTCGGAAG+AGG | - | chr4.4:86659374-86659393 | None:intergenic | 40.0% | |
| TAACACAACTAACTTCGGTG+AGG | + | chr4.4:86659385-86659404 | MS.gene068296:CDS | 40.0% | |
| TGAGCTCAAAATTGGTTGGA+AGG | + | chr4.4:86659447-86659466 | MS.gene068296:CDS | 40.0% | |
| AAATTGGTTGGAAGGGCTCA+AGG | + | chr4.4:86659455-86659474 | MS.gene068296:CDS | 45.0% | |
| AATTGGTTGGAAGGGCTCAA+GGG | + | chr4.4:86659456-86659475 | MS.gene068296:CDS | 45.0% | |
| AGAGAAATGCCTGTGATTGG+TGG | + | chr4.4:86659605-86659624 | MS.gene068296:CDS | 45.0% | |
| AGTTGTAGCATCTCCTGTAG+TGG | - | chr4.4:86659690-86659709 | None:intergenic | 45.0% | |
| ATAGACAACGCTTTGACCTC+AGG | + | chr4.4:86659416-86659435 | MS.gene068296:CDS | 45.0% | |
| ATCTATTGAGCCCACGAAAC+CGG | - | chr4.4:86659252-86659271 | None:intergenic | 45.0% | |
| GTGTTAAACTTCGGAAGAGG+TGG | - | chr4.4:86659371-86659390 | None:intergenic | 45.0% | |
| TATTGGCATGACGTAGTCAG+CGG | + | chr4.4:86659317-86659336 | MS.gene068296:CDS | 45.0% | |
| TGGAACAATTTCTATCGCGG+TGG | - | chr4.4:86659351-86659370 | None:intergenic | 45.0% | |
| TTGTGCTGTGACGATTGTGA+GGG | - | chr4.4:86659222-86659241 | None:intergenic | 45.0% | |
| ! | TTGTGAGGGTGTAACAAGAG+AGG | - | chr4.4:86659208-86659227 | None:intergenic | 45.0% |
| AGTCCACTTCCACCAATCAC+AGG | - | chr4.4:86659617-86659636 | None:intergenic | 50.0% | |
| ATGCCTGTGATTGGTGGAAG+TGG | + | chr4.4:86659611-86659630 | MS.gene068296:CDS | 50.0% | |
| CTTGTGCTGTGACGATTGTG+AGG | - | chr4.4:86659223-86659242 | None:intergenic | 50.0% | |
| GGGTGTAACAAGAGAGGAGA+AGG | - | chr4.4:86659202-86659221 | None:intergenic | 50.0% | |
| GTCACAGCACAAGATGAGAC+CGG | + | chr4.4:86659230-86659249 | MS.gene068296:CDS | 50.0% | |
| TGAGCTCAATTGAGGTCCTG+AGG | - | chr4.4:86659435-86659454 | None:intergenic | 50.0% | |
| ! | ACAAGATGAGACCGGTTTCG+TGG | + | chr4.4:86659238-86659257 | MS.gene068296:CDS | 50.0% |
| ! | CAAGATGAGACCGGTTTCGT+GGG | + | chr4.4:86659239-86659258 | MS.gene068296:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 86659167 | 86659742 | 86659167 | ID=MS.gene068296 |
| chr4.4 | mRNA | 86659167 | 86659742 | 86659167 | ID=MS.gene068296.t1;Parent=MS.gene068296 |
| chr4.4 | exon | 86659167 | 86659742 | 86659167 | ID=MS.gene068296.t1.exon1;Parent=MS.gene068296.t1 |
| chr4.4 | CDS | 86659167 | 86659742 | 86659167 | ID=cds.MS.gene068296.t1;Parent=MS.gene068296.t1 |
| Gene Sequence |
| Protein sequence |
