Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06982.t1 | XP_003625929.1 | 98.7 | 378 | 5 | 0 | 7 | 384 | 1 | 378 | 1.80E-227 | 798.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06982.t1 | Q944S2 | 69.4 | 369 | 108 | 3 | 20 | 384 | 25 | 392 | 2.4e-156 | 553.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06982.t1 | G7LCS5 | 98.7 | 378 | 5 | 0 | 7 | 384 | 1 | 378 | 1.3e-227 | 798.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049140 | MS.gene06982 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene049293 | MS.gene06982 | -0.81079 | 9.67E-51 | -1.69E-46 |
| MS.gene049580 | MS.gene06982 | 0.824319 | 8.61E-54 | -1.69E-46 |
| MS.gene050114 | MS.gene06982 | 0.818872 | 1.56E-52 | -1.69E-46 |
| MS.gene050277 | MS.gene06982 | 0.837476 | 5.08E-57 | -1.69E-46 |
| MS.gene050303 | MS.gene06982 | 0.813217 | 2.86E-51 | -1.69E-46 |
| MS.gene050317 | MS.gene06982 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene050320 | MS.gene06982 | 0.810267 | 1.26E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene06982 | 0.81089 | 9.20E-51 | -1.69E-46 |
| MS.gene051363 | MS.gene06982 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene051365 | MS.gene06982 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene051451 | MS.gene06982 | 0.824167 | 9.35E-54 | -1.69E-46 |
| MS.gene051746 | MS.gene06982 | 0.808022 | 3.80E-50 | -1.69E-46 |
| MS.gene051748 | MS.gene06982 | 0.823771 | 1.16E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene06982 | 0.832205 | 1.08E-55 | -1.69E-46 |
| MS.gene051902 | MS.gene06982 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene06982 | 0.829155 | 6.03E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene06982 | 0.813915 | 2.01E-51 | -1.69E-46 |
| MS.gene052286 | MS.gene06982 | 0.80163 | 8.23E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene06982 | 0.828559 | 8.41E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene06982 | 0.830536 | 2.78E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene06982 | 0.802564 | 5.29E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene06982 | 0.828513 | 8.62E-55 | -1.69E-46 |
| MS.gene053952 | MS.gene06982 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene05469 | MS.gene06982 | 0.808786 | 2.61E-50 | -1.69E-46 |
| MS.gene055314 | MS.gene06982 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene055424 | MS.gene06982 | 0.82257 | 2.21E-53 | -1.69E-46 |
| MS.gene055603 | MS.gene06982 | 0.809873 | 1.53E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene06982 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene056403 | MS.gene06982 | 0.860731 | 1.68E-63 | -1.69E-46 |
| MS.gene056605 | MS.gene06982 | 0.867464 | 1.34E-65 | -1.69E-46 |
| MS.gene056631 | MS.gene06982 | 0.820814 | 5.62E-53 | -1.69E-46 |
| MS.gene056986 | MS.gene06982 | 0.817295 | 3.55E-52 | -1.69E-46 |
| MS.gene057057 | MS.gene06982 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene06982 | 0.833093 | 6.50E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene06982 | 0.828866 | 7.08E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene06982 | 0.814936 | 1.20E-51 | -1.69E-46 |
| MS.gene05781 | MS.gene06982 | 0.83031 | 3.16E-55 | -1.69E-46 |
| MS.gene057999 | MS.gene06982 | 0.851938 | 6.41E-61 | -1.69E-46 |
| MS.gene058055 | MS.gene06982 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene06982 | 0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene06982 | 0.804793 | 1.82E-49 | -1.69E-46 |
| MS.gene058238 | MS.gene06982 | 0.84116 | 5.62E-58 | -1.69E-46 |
| MS.gene059146 | MS.gene06982 | 0.813819 | 2.11E-51 | -1.69E-46 |
| MS.gene059830 | MS.gene06982 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene06001 | MS.gene06982 | 0.839565 | 1.47E-57 | -1.69E-46 |
| MS.gene06011 | MS.gene06982 | 0.843476 | 1.37E-58 | -1.69E-46 |
| MS.gene060297 | MS.gene06982 | 0.82841 | 9.13E-55 | -1.69E-46 |
| MS.gene060365 | MS.gene06982 | 0.808425 | 3.12E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene06982 | 0.8295 | 4.97E-55 | -1.69E-46 |
| MS.gene060763 | MS.gene06982 | 0.844208 | 8.72E-59 | -1.69E-46 |
| MS.gene060830 | MS.gene06982 | 0.831352 | 1.75E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06982.t1 | MTR_7g108870 | 98.677 | 378 | 5 | 0 | 7 | 384 | 1 | 378 | 0.0 | 779 |
| MS.gene06982.t1 | MTR_8g058590 | 98.677 | 378 | 5 | 0 | 7 | 384 | 1 | 378 | 0.0 | 779 |
| MS.gene06982.t1 | MTR_7g108870 | 97.368 | 266 | 7 | 0 | 7 | 272 | 1 | 266 | 0.0 | 538 |
| MS.gene06982.t1 | MTR_8g058557 | 98.283 | 233 | 4 | 0 | 7 | 239 | 1 | 233 | 3.02e-171 | 478 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06982.t1 | AT2G47790 | 69.377 | 369 | 108 | 3 | 20 | 384 | 25 | 392 | 0.0 | 533 |
Find 85 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCTGAAAGTTGGAATT+TGG | 0.165604 | 7.3:+6337339 | MS.gene06982:CDS |
| CTCATTTCTGCTTCAGTTGA+TGG | 0.185036 | 7.3:+6336377 | MS.gene06982:CDS |
| CAAAATGTAGGTGATTAATA+TGG | 0.195603 | 7.3:+6336740 | MS.gene06982:intron |
| ATGAGCTTGCCTTGTTCTTC+AGG | 0.238064 | 7.3:-6336359 | None:intergenic |
| GTCGTTTCACTGTAATTTAC+AGG | 0.258641 | 7.3:-6338677 | None:intergenic |
| GGACGTACTTTGGGATGATT+TGG | 0.280115 | 7.3:-6334349 | None:intergenic |
| AACTCTATCCAAACTAATTT+CGG | 0.290124 | 7.3:+6334311 | MS.gene06982:CDS |
| GAACAAGAGCTTAGAATATT+GGG | 0.292886 | 7.3:-6334637 | None:intergenic |
| CATCCACATGAGAATCTTCT+AGG | 0.294934 | 7.3:-6335299 | None:intergenic |
| GCGTTTAACGTTGTTGGGTA+TGG | 0.309545 | 7.3:-6334276 | None:intergenic |
| AGAACAAGAGCTTAGAATAT+TGG | 0.313825 | 7.3:-6334638 | None:intergenic |
| CGGCACAAATGCGGGTACTT+TGG | 0.324412 | 7.3:+6338646 | MS.gene06982:CDS |
| GGCACAAATGCGGGTACTTT+GGG | 0.345345 | 7.3:+6338647 | MS.gene06982:CDS |
| AATCGTCACCGAAATTAGTT+TGG | 0.355363 | 7.3:-6334319 | None:intergenic |
| ATCTTGGATTTCAAGTTCAT+TGG | 0.361402 | 7.3:+6338868 | MS.gene06982:CDS |
| TACAGTGAAACGACAACAAT+TGG | 0.373503 | 7.3:+6338686 | MS.gene06982:CDS |
| ACCGAAGCGTTTAACGTTGT+TGG | 0.380689 | 7.3:-6334282 | None:intergenic |
| GCATCAAAACTAGTATTAGT+AGG | 0.387663 | 7.3:-6338933 | None:intergenic |
| GTTCTTCAGATGGTACTATC+AGG | 0.389104 | 7.3:+6334656 | MS.gene06982:CDS |
| GAGAGAGTTATCAGAAGCTT+TGG | 0.390315 | 7.3:+6336793 | MS.gene06982:CDS |
| CCCAGGTACTCTTGTGGGAT+TGG | 0.391389 | 7.3:+6335253 | MS.gene06982:intron |
| CCAGTGGTGGGTCAATATTA+TGG | 0.397482 | 7.3:+6334556 | MS.gene06982:CDS |
| GGATGGACAGGTGGGGAAGA+TGG | 0.408251 | 7.3:+6338797 | MS.gene06982:CDS |
| ATGAACTTGAAATCCAAGAT+TGG | 0.410585 | 7.3:-6338865 | None:intergenic |
| CCGAAGCGTTTAACGTTGTT+GGG | 0.411456 | 7.3:-6334281 | None:intergenic |
| CGTTTAACGTTGTTGGGTAT+GGG | 0.432856 | 7.3:-6334275 | None:intergenic |
| ATGTCCAGAGTTCATAGTTC+AGG | 0.435022 | 7.3:+6338767 | MS.gene06982:CDS |
| GTACTTTAGCTTCTGAAAGT+TGG | 0.459371 | 7.3:+6337332 | MS.gene06982:CDS |
| GAAATCTTCAGCTTCTCCAT+TGG | 0.460403 | 7.3:+6335090 | MS.gene06982:CDS |
| GGACACAAGAACATTTCAAC+AGG | 0.464750 | 7.3:+6334684 | MS.gene06982:CDS |
| ATCTTCAGCTTCTCCATTGG+AGG | 0.466757 | 7.3:+6335093 | MS.gene06982:CDS |
| ACGTTGTTGGGTATGGGAAA+AGG | 0.467623 | 7.3:-6334269 | None:intergenic |
| CATCAAAACTAGTATTAGTA+GGG | 0.468071 | 7.3:-6338932 | None:intergenic |
| TGAGCTTGCCTTGTTCTTCA+GGG | 0.472636 | 7.3:-6336358 | None:intergenic |
| TTGTGAATGGAAGGGATGAT+TGG | 0.474743 | 7.3:+6334485 | MS.gene06982:intron |
| ATCTGCATATTTGATACCAC+TGG | 0.474964 | 7.3:+6336404 | MS.gene06982:CDS |
| AATGGAAGCAATTGCGGCCA+TGG | 0.476431 | 7.3:+6334229 | None:intergenic |
| CTAAGCTCTTGTTCTTCAGA+TGG | 0.477643 | 7.3:+6334646 | MS.gene06982:CDS |
| ATTATCCCAGGTACTCTTGT+GGG | 0.479200 | 7.3:+6335248 | MS.gene06982:intron |
| CAGATGGTACTATCAGGACT+TGG | 0.481372 | 7.3:+6334662 | MS.gene06982:CDS |
| CAGGTTTCTATTATCAATGC+TGG | 0.488118 | 7.3:+6335057 | MS.gene06982:intron |
| AAAATGTAGGTGATTAATAT+GGG | 0.496513 | 7.3:+6336741 | MS.gene06982:intron |
| TGCTGCGGGTTGTGATTCAC+AGG | 0.496992 | 7.3:+6335134 | MS.gene06982:CDS |
| CACTTCTAACAACATCTGTA+TGG | 0.503113 | 7.3:-6338736 | None:intergenic |
| TTGATCGGCGGCACAAATGC+GGG | 0.512819 | 7.3:+6338638 | MS.gene06982:CDS |
| AAGATGGTAGGCTATGTTGT+TGG | 0.515760 | 7.3:+6338813 | MS.gene06982:CDS |
| CCCAACAACGTTAAACGCTT+CGG | 0.516028 | 7.3:+6334281 | MS.gene06982:CDS |
| TTAACTCATATTGAAACTCT+CGG | 0.520375 | 7.3:+6336819 | MS.gene06982:CDS |
| AATGCCTGAACTATGAACTC+TGG | 0.526089 | 7.3:-6338771 | None:intergenic |
| CCATAATATTGACCCACCAC+TGG | 0.537095 | 7.3:-6334556 | None:intergenic |
| TAACTCATATTGAAACTCTC+GGG | 0.537523 | 7.3:+6336820 | MS.gene06982:CDS |
| GGGAACATCAATTGCAAAGG+TGG | 0.538474 | 7.3:+6336761 | MS.gene06982:CDS |
| GGACAGGTGGGGAAGATGGT+AGG | 0.540295 | 7.3:+6338801 | MS.gene06982:CDS |
| AGTGGAAATTTAGTTGCTGC+GGG | 0.541232 | 7.3:+6335120 | MS.gene06982:CDS |
| GAAACTGTATTCACCAGTGG+TGG | 0.542400 | 7.3:+6334543 | MS.gene06982:CDS |
| ACAATAAATGGAAGCAATTG+CGG | 0.543794 | 7.3:+6334223 | None:intergenic |
| AGCATTTGGGACTGGAAAGA+AGG | 0.546349 | 7.3:+6337280 | MS.gene06982:intron |
| AAGCTGAAGATTTCTTGAGA+TGG | 0.552407 | 7.3:-6335081 | None:intergenic |
| AAGGGATGATTGGAGTTCAA+TGG | 0.555515 | 7.3:+6334495 | MS.gene06982:intron |
| TCAATATTATGGAGAGTGCA+AGG | 0.560776 | 7.3:+6334567 | MS.gene06982:CDS |
| ACTAGTATTAGTAGGGGTGA+TGG | 0.565765 | 7.3:-6338925 | None:intergenic |
| GGAACATCAATTGCAAAGGT+GGG | 0.576460 | 7.3:+6336762 | MS.gene06982:CDS |
| GTTGATCGGCGGCACAAATG+CGG | 0.581332 | 7.3:+6338637 | MS.gene06982:CDS |
| TTCTCCATTGGAGGACCTAG+TGG | 0.584400 | 7.3:+6335102 | MS.gene06982:CDS |
| TCATGTGGATGATGTCACTC+AGG | 0.584599 | 7.3:+6335311 | MS.gene06982:CDS |
| AGTGAAACGACAACAATTGG+AGG | 0.594927 | 7.3:+6338689 | MS.gene06982:CDS |
| TAGTGGAAATTTAGTTGCTG+CGG | 0.595599 | 7.3:+6335119 | MS.gene06982:CDS |
| AATTATCCCAGGTACTCTTG+TGG | 0.598714 | 7.3:+6335247 | MS.gene06982:intron |
| GAACTATGAACTCTGGACAT+AGG | 0.601738 | 7.3:-6338764 | None:intergenic |
| TATGGGAACATCAATTGCAA+AGG | 0.605817 | 7.3:+6336758 | MS.gene06982:CDS |
| TCGTTGTTCCTCGACATCCA+TGG | 0.607781 | 7.3:-6334246 | None:intergenic |
| AGATGGTACTATCAGGACTT+GGG | 0.627841 | 7.3:+6334663 | MS.gene06982:CDS |
| ATTTCCACTAGGTCCTCCAA+TGG | 0.630109 | 7.3:-6335106 | None:intergenic |
| GCAGAAGCAATTCTCGAAGG+TGG | 0.633134 | 7.3:+6338713 | MS.gene06982:CDS |
| AATTGCGGCCATGGATGTCG+AGG | 0.639683 | 7.3:+6334238 | MS.gene06982:CDS |
| GGTGCAGAAGCAATTCTCGA+AGG | 0.645612 | 7.3:+6338710 | MS.gene06982:CDS |
| GGATGATTGGAGTTCAATGG+CGG | 0.648745 | 7.3:+6334498 | MS.gene06982:CDS |
| ATCGTCGTTAATATCTCCAG+TGG | 0.649496 | 7.3:-6336420 | None:intergenic |
| CGACGATGATCATCTAGAGT+CGG | 0.653681 | 7.3:+6336436 | MS.gene06982:CDS |
| ATCAAAACTAGTATTAGTAG+GGG | 0.658117 | 7.3:-6338931 | None:intergenic |
| AAACTGTATTCACCAGTGGT+GGG | 0.659751 | 7.3:+6334544 | MS.gene06982:CDS |
| CAATATTATGGAGAGTGCAA+GGG | 0.660822 | 7.3:+6334568 | MS.gene06982:CDS |
| GCAGCAACTAAATTTCCACT+AGG | 0.673218 | 7.3:-6335117 | None:intergenic |
| AGTGAAACTGTATTCACCAG+TGG | 0.687068 | 7.3:+6334540 | MS.gene06982:CDS |
| ATGCCTAGAAGATTCTCATG+TGG | 0.767526 | 7.3:+6335296 | MS.gene06982:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATAGTTTCTATAAA+AGG | + | chr7.3:6337441-6337460 | MS.gene06982:intron | 10.0% |
| !! | TAAAATTAAATTAAAGTCTT+CGG | - | chr7.3:6338171-6338190 | None:intergenic | 10.0% |
| !! | TAAATTGTATAAAATTTATG+AGG | - | chr7.3:6338194-6338213 | None:intergenic | 10.0% |
| !! | AATACAAGGAATTAAATATT+TGG | - | chr7.3:6335805-6335824 | None:intergenic | 15.0% |
| !! | TTATCTGAGTTAAATATATT+TGG | - | chr7.3:6336530-6336549 | None:intergenic | 15.0% |
| !! | TTCTCTTTAAATTAATAATG+TGG | + | chr7.3:6337907-6337926 | MS.gene06982:intron | 15.0% |
| !! | TTGTTACTAATGTTATTATT+TGG | + | chr7.3:6334718-6334737 | MS.gene06982:intron | 15.0% |
| !!! | AATTAAGTTGTTTATCTATA+AGG | - | chr7.3:6334768-6334787 | None:intergenic | 15.0% |
| !!! | ACATTTTTTCAAATTTTTAC+CGG | + | chr7.3:6337065-6337084 | MS.gene06982:intron | 15.0% |
| !!! | ATCACATTACATTTTTATTT+TGG | - | chr7.3:6337612-6337631 | None:intergenic | 15.0% |
| !!! | TGATATAATTGTTATTTCTT+TGG | + | chr7.3:6335690-6335709 | MS.gene06982:intron | 15.0% |
| !! | AAAATGTAGGTGATTAATAT+GGG | + | chr7.3:6336741-6336760 | MS.gene06982:intron | 20.0% |
| !! | ATATATTTGGCCATTTAAAA+AGG | - | chr7.3:6336517-6336536 | None:intergenic | 20.0% |
| !! | ATCTTATTGCAGAAAAATAA+TGG | + | chr7.3:6335746-6335765 | MS.gene06982:intron | 20.0% |
| !! | ATTATAAATCTCCCAAATTA+AGG | - | chr7.3:6334453-6334472 | None:intergenic | 20.0% |
| !! | CACATTTGAAAAAAAAAAAC+AGG | + | chr7.3:6336648-6336667 | MS.gene06982:intron | 20.0% |
| !! | TTATAAATCTACAAGGAATA+AGG | - | chr7.3:6335780-6335799 | None:intergenic | 20.0% |
| !! | TTATAAATCTCCCAAATTAA+GGG | - | chr7.3:6334452-6334471 | None:intergenic | 20.0% |
| !! | TTTATTTATGCCCTTAATTT+GGG | + | chr7.3:6334439-6334458 | MS.gene06982:intron | 20.0% |
| !!! | ACATTACATTTTTATTTTGG+AGG | - | chr7.3:6337609-6337628 | None:intergenic | 20.0% |
| !!! | ATTTGTCAATTTGCTAAATT+CGG | + | chr7.3:6338349-6338368 | MS.gene06982:intron | 20.0% |
| !!! | ATTTTATACAATTTAGTTCC+TGG | + | chr7.3:6338199-6338218 | MS.gene06982:intron | 20.0% |
| !!! | CAATTTACAACCTTTTTAAA+TGG | + | chr7.3:6336504-6336523 | MS.gene06982:intron | 20.0% |
| !!! | TAGAATTTGCTTTTTAACTT+TGG | + | chr7.3:6336017-6336036 | MS.gene06982:intron | 20.0% |
| !!! | TATCAATCAGATTTTGTTTT+CGG | + | chr7.3:6334603-6334622 | MS.gene06982:CDS | 20.0% |
| !!! | TTGGGAGATTTATAATTTTT+GGG | + | chr7.3:6334457-6334476 | MS.gene06982:intron | 20.0% |
| !!! | TTTGGGAGATTTATAATTTT+TGG | + | chr7.3:6334456-6334475 | MS.gene06982:intron | 20.0% |
| !!! | TTTGGTTTTATAAATCTACA+AGG | - | chr7.3:6335787-6335806 | None:intergenic | 20.0% |
| !!! | TTTTATTTATGCCCTTAATT+TGG | + | chr7.3:6334438-6334457 | MS.gene06982:intron | 20.0% |
| ! | AAAATACATGTGACAAATTC+AGG | - | chr7.3:6336093-6336112 | None:intergenic | 25.0% |
| ! | AACTCTATCCAAACTAATTT+CGG | + | chr7.3:6334311-6334330 | MS.gene06982:CDS | 25.0% |
| ! | AAGCATCAATAGTGTAAATA+GGG | - | chr7.3:6336607-6336626 | None:intergenic | 25.0% |
| ! | AGATAAGTAATCAACAGAAT+AGG | + | chr7.3:6336544-6336563 | MS.gene06982:intron | 25.0% |
| ! | ATAAGATTTCCACTATTGTT+AGG | - | chr7.3:6335733-6335752 | None:intergenic | 25.0% |
| ! | ATAAGCATATTCCATCAAAT+AGG | - | chr7.3:6337385-6337404 | None:intergenic | 25.0% |
| ! | ATAGTATTCTCTATTGTGAA+GGG | + | chr7.3:6335655-6335674 | MS.gene06982:intron | 25.0% |
| ! | CAAAATGTAGGTGATTAATA+TGG | + | chr7.3:6336740-6336759 | MS.gene06982:intron | 25.0% |
| ! | CTTATTCAGTCATAAATACA+TGG | + | chr7.3:6338418-6338437 | MS.gene06982:intron | 25.0% |
| ! | GAAAATGAAAATAGACAGTA+AGG | + | chr7.3:6336208-6336227 | MS.gene06982:intron | 25.0% |
| ! | GTAGTATATGTAATTTAGCA+TGG | - | chr7.3:6337798-6337817 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATGCAAAT+AGG | + | chr7.3:6334987-6335006 | MS.gene06982:intron | 25.0% |
| ! | TGTTAGGACTATAGAATAAA+AGG | + | chr7.3:6335529-6335548 | MS.gene06982:intron | 25.0% |
| ! | TTAACTCATATTGAAACTCT+CGG | + | chr7.3:6336819-6336838 | MS.gene06982:CDS | 25.0% |
| ! | TTAGTAAGGAGTAATTCAAT+TGG | + | chr7.3:6335960-6335979 | MS.gene06982:intron | 25.0% |
| ! | TTATTGCAGAAAAATAATGG+AGG | + | chr7.3:6335749-6335768 | MS.gene06982:intron | 25.0% |
| ! | TTTATAAACTGCCAACAAAT+GGG | + | chr7.3:6335477-6335496 | MS.gene06982:intron | 25.0% |
| !! | ATGTATTTTATTACCTTGCT+TGG | + | chr7.3:6336104-6336123 | MS.gene06982:intron | 25.0% |
| !! | CATTGTAGTTCTATTGTAAT+CGG | + | chr7.3:6337501-6337520 | MS.gene06982:intron | 25.0% |
| !! | GTTTTTCTCTCCATAATTAT+TGG | + | chr7.3:6334740-6334759 | MS.gene06982:intron | 25.0% |
| !! | TAATCTAAAACTTGATCTGA+TGG | + | chr7.3:6335366-6335385 | MS.gene06982:intron | 25.0% |
| !! | TATTCTTTTGTGTAGCATTT+GGG | + | chr7.3:6337267-6337286 | MS.gene06982:intron | 25.0% |
| !! | TGTCTATTTTCATTTTCTGA+GGG | - | chr7.3:6336205-6336224 | None:intergenic | 25.0% |
| !! | TTATTTATGCAGGATTAGTA+AGG | + | chr7.3:6335946-6335965 | MS.gene06982:intron | 25.0% |
| !! | TTTTATAAACTGCCAACAAA+TGG | + | chr7.3:6335476-6335495 | MS.gene06982:intron | 25.0% |
| !!! | ATCAATCAGATTTTGTTTTC+GGG | + | chr7.3:6334604-6334623 | MS.gene06982:CDS | 25.0% |
| !!! | ATCCAAGATTGGTTTTTTTT+AGG | - | chr7.3:6338857-6338876 | None:intergenic | 25.0% |
| !!! | ATGCTCTGAATTTTATGAAT+TGG | + | chr7.3:6337946-6337965 | MS.gene06982:intron | 25.0% |
| !!! | ATTTTTTGCTTGCAAAATGT+AGG | + | chr7.3:6336728-6336747 | MS.gene06982:intron | 25.0% |
| !!! | TCCAAGATTGGTTTTTTTTA+GGG | - | chr7.3:6338856-6338875 | None:intergenic | 25.0% |
| !!! | TTAATTTTCGAAGAAAGCAT+TGG | - | chr7.3:6337578-6337597 | None:intergenic | 25.0% |
| !!! | TTCTTTGGAATTCAATTCTT+GGG | + | chr7.3:6335705-6335724 | MS.gene06982:intron | 25.0% |
| !!! | TTTCTTTGGAATTCAATTCT+TGG | + | chr7.3:6335704-6335723 | MS.gene06982:intron | 25.0% |
| !!! | TTTTTGGGTTTTTTTGTGAA+TGG | + | chr7.3:6334472-6334491 | MS.gene06982:intron | 25.0% |
| AAAAATGTAATGTGATGCGT+AGG | + | chr7.3:6337616-6337635 | MS.gene06982:intron | 30.0% | |
| AAAAGAAAGAAAGAATGGAG+GGG | + | chr7.3:6337688-6337707 | MS.gene06982:intron | 30.0% | |
| AAATTGAATGTCAAAACTGC+AGG | + | chr7.3:6335038-6335057 | MS.gene06982:intron | 30.0% | |
| AAGGTAATTGCAATCAGATA+AGG | - | chr7.3:6338475-6338494 | None:intergenic | 30.0% | |
| AAGTAGTTATACGTTGTTAG+AGG | + | chr7.3:6335567-6335586 | MS.gene06982:intron | 30.0% | |
| AAGTCTCCAACTAACAATAT+CGG | - | chr7.3:6335834-6335853 | None:intergenic | 30.0% | |
| AATTCCACAACTTGAAATCA+TGG | + | chr7.3:6337537-6337556 | MS.gene06982:intron | 30.0% | |
| ACAATAGAACTACAATGGAT+CGG | - | chr7.3:6337498-6337517 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAG+TGG | - | chr7.3:6334977-6334996 | None:intergenic | 30.0% | |
| AGAAAAGAAAGAAAGAATGG+AGG | + | chr7.3:6337686-6337705 | MS.gene06982:intron | 30.0% | |
| AGAACAAGAGCTTAGAATAT+TGG | - | chr7.3:6334641-6334660 | None:intergenic | 30.0% | |
| AGCTTAAGAAGAAAGTGAAA+AGG | - | chr7.3:6334373-6334392 | None:intergenic | 30.0% | |
| ATAAGCACGTATATGATTAG+TGG | - | chr7.3:6334808-6334827 | None:intergenic | 30.0% | |
| ATGAACTTGAAATCCAAGAT+TGG | - | chr7.3:6338868-6338887 | None:intergenic | 30.0% | |
| CAAGAGAAGCTGAAAAATTA+TGG | + | chr7.3:6338615-6338634 | MS.gene06982:CDS | 30.0% | |
| CAAGCATCAATAGTGTAAAT+AGG | - | chr7.3:6336608-6336627 | None:intergenic | 30.0% | |
| CATAGTATTCTCTATTGTGA+AGG | + | chr7.3:6335654-6335673 | MS.gene06982:intron | 30.0% | |
| CATCAATTCATAGTTGCTAA+TGG | + | chr7.3:6336950-6336969 | MS.gene06982:intron | 30.0% | |
| CGATTACAATAGAACTACAA+TGG | - | chr7.3:6337503-6337522 | None:intergenic | 30.0% | |
| CTTATTTGTTTGAACCTGAA+AGG | + | chr7.3:6337400-6337419 | MS.gene06982:intron | 30.0% | |
| GAAAAGAAAGAAAGAATGGA+GGG | + | chr7.3:6337687-6337706 | MS.gene06982:intron | 30.0% | |
| GAAAGGAAAGATCAATTTGT+TGG | - | chr7.3:6338558-6338577 | None:intergenic | 30.0% | |
| GAACAAGAGCTTAGAATATT+GGG | - | chr7.3:6334640-6334659 | None:intergenic | 30.0% | |
| GAGGAAATAAAAACCAGTAA+TGG | - | chr7.3:6336858-6336877 | None:intergenic | 30.0% | |
| GCTGAAAAATTATGGTTGAT+CGG | + | chr7.3:6338623-6338642 | MS.gene06982:CDS | 30.0% | |
| TAAACTATATCTAGCCATTG+AGG | - | chr7.3:6336877-6336896 | None:intergenic | 30.0% | |
| TAACTCATATTGAAACTCTC+GGG | + | chr7.3:6336820-6336839 | MS.gene06982:CDS | 30.0% | |
| TAGTATTCTCTATTGTGAAG+GGG | + | chr7.3:6335656-6335675 | MS.gene06982:intron | 30.0% | |
| TATCTATCTATCTATCACCA+AGG | - | chr7.3:6335180-6335199 | None:intergenic | 30.0% | |
| TCTTCAGTTCAAATATGCAA+AGG | - | chr7.3:6336684-6336703 | None:intergenic | 30.0% | |
| TGAAATGATTTAGACTGGTA+TGG | + | chr7.3:6335205-6335224 | MS.gene06982:intron | 30.0% | |
| TGGAGAAAAGAAAGAAAGAA+TGG | + | chr7.3:6337683-6337702 | MS.gene06982:intron | 30.0% | |
| TGTTAGAGGAATATGTGTAT+AGG | + | chr7.3:6335581-6335600 | MS.gene06982:intron | 30.0% | |
| TGTTGAAAATGTGTGATTCT+AGG | + | chr7.3:6336325-6336344 | MS.gene06982:intron | 30.0% | |
| ! | CTATAAGGCACCAATAATTA+TGG | - | chr7.3:6334753-6334772 | None:intergenic | 30.0% |
| ! | CTATTCTTTTGTGTAGCATT+TGG | + | chr7.3:6337266-6337285 | MS.gene06982:intron | 30.0% |
| ! | CTGTCTATTTTCATTTTCTG+AGG | - | chr7.3:6336206-6336225 | None:intergenic | 30.0% |
| ! | GAATTGATGACTTTGAATTC+AGG | - | chr7.3:6336939-6336958 | None:intergenic | 30.0% |
| ! | TTTTTCTTGCAAGTTCTTTC+TGG | - | chr7.3:6338902-6338921 | None:intergenic | 30.0% |
| !! | AAAGATCAATTTGTTGGCTA+AGG | - | chr7.3:6338552-6338571 | None:intergenic | 30.0% |
| !! | ATCTTGGATTTCAAGTTCAT+TGG | + | chr7.3:6338868-6338887 | MS.gene06982:CDS | 30.0% |
| !! | GGTTATTAATTTGCATGTTG+TGG | - | chr7.3:6336586-6336605 | None:intergenic | 30.0% |
| !! | TGCAATTTTGAGGATCAATT+TGG | + | chr7.3:6338392-6338411 | MS.gene06982:intron | 30.0% |
| !! | TGGCTTGTTCAAAAAAAGTA+AGG | + | chr7.3:6335980-6335999 | MS.gene06982:intron | 30.0% |
| !!! | ACTGGTTTTTATTTCCTCAA+TGG | + | chr7.3:6336860-6336879 | MS.gene06982:intron | 30.0% |
| !!! | CATTCTTACGTCAGTTTTTT+AGG | - | chr7.3:6335437-6335456 | None:intergenic | 30.0% |
| !!! | CCAAGATTGGTTTTTTTTAG+GGG | - | chr7.3:6338855-6338874 | None:intergenic | 30.0% |
| AAAAACTGACGTAAGAATGC+AGG | + | chr7.3:6335438-6335457 | MS.gene06982:intron | 35.0% | |
| AAAGAAAGAAAGAATGGAGG+GGG | + | chr7.3:6337689-6337708 | MS.gene06982:intron | 35.0% | |
| AAAGTGAAAAGGACGTACTT+TGG | - | chr7.3:6334362-6334381 | None:intergenic | 35.0% | |
| AAGCTGAAGATTTCTTGAGA+TGG | - | chr7.3:6335084-6335103 | None:intergenic | 35.0% | |
| AAGCTTGTATACTGCTCTAT+TGG | + | chr7.3:6338504-6338523 | MS.gene06982:intron | 35.0% | |
| AAGTGAAAAGGACGTACTTT+GGG | - | chr7.3:6334361-6334380 | None:intergenic | 35.0% | |
| AATATCGGACACAGAATACA+AGG | - | chr7.3:6335819-6335838 | None:intergenic | 35.0% | |
| AATCGTCACCGAAATTAGTT+TGG | - | chr7.3:6334322-6334341 | None:intergenic | 35.0% | |
| ACAAACATCCTTTCACCAAA+GGG | - | chr7.3:6335400-6335419 | None:intergenic | 35.0% | |
| ACACTCTTATGCTCTTAATG+TGG | + | chr7.3:6337165-6337184 | MS.gene06982:intron | 35.0% | |
| AGAGGAATATGTGTATAGGT+AGG | + | chr7.3:6335585-6335604 | MS.gene06982:intron | 35.0% | |
| AGCTTGTATACTGCTCTATT+GGG | + | chr7.3:6338505-6338524 | MS.gene06982:intron | 35.0% | |
| AGGTAGGACAATACAAATGT+TGG | + | chr7.3:6335601-6335620 | MS.gene06982:intron | 35.0% | |
| AGTGCATCATAGCTAATGAA+TGG | + | chr7.3:6337124-6337143 | MS.gene06982:intron | 35.0% | |
| ATATATATGCTCCAGCTTGA+AGG | - | chr7.3:6336268-6336287 | None:intergenic | 35.0% | |
| ATCTGATTGCAATTACCTTG+TGG | + | chr7.3:6338476-6338495 | MS.gene06982:intron | 35.0% | |
| ATCTGCATATTTGATACCAC+TGG | + | chr7.3:6336404-6336423 | MS.gene06982:CDS | 35.0% | |
| CACTCTTATGCTCTTAATGT+GGG | + | chr7.3:6337166-6337185 | MS.gene06982:intron | 35.0% | |
| CACTTCTAACAACATCTGTA+TGG | - | chr7.3:6338739-6338758 | None:intergenic | 35.0% | |
| CAGGTTTCTATTATCAATGC+TGG | + | chr7.3:6335057-6335076 | MS.gene06982:intron | 35.0% | |
| CAGTCATAAATACATGGCAT+TGG | + | chr7.3:6338424-6338443 | MS.gene06982:intron | 35.0% | |
| CATATCATTCTACTCGTACA+AGG | - | chr7.3:6336043-6336062 | None:intergenic | 35.0% | |
| CATTTAATGTGCCACATCAT+AGG | + | chr7.3:6338265-6338284 | MS.gene06982:intron | 35.0% | |
| CCATGTTGACCTAATGAAAA+TGG | - | chr7.3:6335890-6335909 | None:intergenic | 35.0% | |
| CCCCTAAAAAAAACCAATCT+TGG | + | chr7.3:6338852-6338871 | MS.gene06982:CDS | 35.0% | |
| CCTCTAACAATAGAAGTCAA+CGG | - | chr7.3:6338016-6338035 | None:intergenic | 35.0% | |
| CTGTGTGAAATGATTTAGAC+TGG | + | chr7.3:6335200-6335219 | MS.gene06982:intron | 35.0% | |
| CTTATTTCCATAAGCTCTTG+AGG | - | chr7.3:6334899-6334918 | None:intergenic | 35.0% | |
| CTTGTACGAGTAGAATGATA+TGG | + | chr7.3:6336041-6336060 | MS.gene06982:intron | 35.0% | |
| GAAAAATTATGGTTGATCGG+CGG | + | chr7.3:6338626-6338645 | MS.gene06982:CDS | 35.0% | |
| GACAAATTCAGGATTTGTCA+AGG | - | chr7.3:6336082-6336101 | None:intergenic | 35.0% | |
| GATCCTCAAAATTGCAAGTA+TGG | - | chr7.3:6338388-6338407 | None:intergenic | 35.0% | |
| GCATATTCCATCAAATAGGA+AGG | - | chr7.3:6337381-6337400 | None:intergenic | 35.0% | |
| GTACAATTCATCTCCATTAC+TGG | + | chr7.3:6336842-6336861 | MS.gene06982:intron | 35.0% | |
| GTCGTTTCACTGTAATTTAC+AGG | - | chr7.3:6338680-6338699 | None:intergenic | 35.0% | |
| GTTCTTTCCTTCCTATTTGA+TGG | + | chr7.3:6337371-6337390 | MS.gene06982:intron | 35.0% | |
| TACAGTGAAACGACAACAAT+TGG | + | chr7.3:6338686-6338705 | MS.gene06982:CDS | 35.0% | |
| TACGAAGTATAACACCTTTC+AGG | - | chr7.3:6337417-6337436 | None:intergenic | 35.0% | |
| TAGTCAACCTGCAAAAAGAA+AGG | - | chr7.3:6338575-6338594 | None:intergenic | 35.0% | |
| TAGTGGAAATTTAGTTGCTG+CGG | + | chr7.3:6335119-6335138 | MS.gene06982:CDS | 35.0% | |
| TATATATGCTCCAGCTTGAA+GGG | - | chr7.3:6336267-6336286 | None:intergenic | 35.0% | |
| TATGGGAACATCAATTGCAA+AGG | + | chr7.3:6336758-6336777 | MS.gene06982:CDS | 35.0% | |
| TATTGTAATCGGCCTTACTT+AGG | + | chr7.3:6337512-6337531 | MS.gene06982:intron | 35.0% | |
| TGATATGGAGTGATCAACTT+TGG | + | chr7.3:6336056-6336075 | MS.gene06982:intron | 35.0% | |
| TGTAAGAGGAAACAGTTGTT+AGG | + | chr7.3:6335513-6335532 | MS.gene06982:intron | 35.0% | |
| TTGCAAGAATTGTCAACTGA+AGG | - | chr7.3:6336487-6336506 | None:intergenic | 35.0% | |
| TTGGCTTCAGTTGAATGATA+TGG | + | chr7.3:6336123-6336142 | MS.gene06982:intron | 35.0% | |
| ! | AGCTTCTGAAAGTTGGAATT+TGG | + | chr7.3:6337339-6337358 | MS.gene06982:CDS | 35.0% |
| ! | CAATATTATGGAGAGTGCAA+GGG | + | chr7.3:6334568-6334587 | MS.gene06982:CDS | 35.0% |
| ! | CATTTTATCCCTGAAGAACA+AGG | + | chr7.3:6336350-6336369 | MS.gene06982:CDS | 35.0% |
| ! | CCATTTTCATTAGGTCAACA+TGG | + | chr7.3:6335887-6335906 | MS.gene06982:intron | 35.0% |
| ! | CTCTTTAAACCTGATCCTTT+TGG | + | chr7.3:6337730-6337749 | MS.gene06982:intron | 35.0% |
| ! | GATCCATACTTGCAATTTTG+AGG | + | chr7.3:6338382-6338401 | MS.gene06982:intron | 35.0% |
| ! | GATCTTTCCTTTCTTTTTGC+AGG | + | chr7.3:6338565-6338584 | MS.gene06982:intron | 35.0% |
| ! | GTACTTTAGCTTCTGAAAGT+TGG | + | chr7.3:6337332-6337351 | MS.gene06982:CDS | 35.0% |
| ! | GTTCATAGTTCAGGCATTTT+TGG | + | chr7.3:6338776-6338795 | MS.gene06982:CDS | 35.0% |
| ! | TCAATATTATGGAGAGTGCA+AGG | + | chr7.3:6334567-6334586 | MS.gene06982:CDS | 35.0% |
| ! | TGCTCTTAATGTGGGTTATA+TGG | + | chr7.3:6337174-6337193 | MS.gene06982:intron | 35.0% |
| ! | TTGTGGAATTAGCCTAAGTA+AGG | - | chr7.3:6337527-6337546 | None:intergenic | 35.0% |
| !! | ATAGTTCAGGCATTTTTGGA+TGG | + | chr7.3:6338780-6338799 | MS.gene06982:CDS | 35.0% |
| !! | TCACAGGTTTGCTTTTCTAT+TGG | + | chr7.3:6335150-6335169 | MS.gene06982:intron | 35.0% |
| !! | TGTCTGTAGCCATTTTCATT+AGG | + | chr7.3:6335878-6335897 | MS.gene06982:intron | 35.0% |
| !!! | ATTGCAAAGGTGGGTTTTTT+TGG | + | chr7.3:6336771-6336790 | MS.gene06982:CDS | 35.0% |
| !!! | CTTACGTCAGTTTTTTAGGA+GGG | - | chr7.3:6335433-6335452 | None:intergenic | 35.0% |
| !!! | GGGTTTTTTTGTGAATGGAA+GGG | + | chr7.3:6334477-6334496 | MS.gene06982:intron | 35.0% |
| !!! | TCTTACGTCAGTTTTTTAGG+AGG | - | chr7.3:6335434-6335453 | None:intergenic | 35.0% |
| !!! | TGGGTTTTTTTGTGAATGGA+AGG | + | chr7.3:6334476-6334495 | MS.gene06982:intron | 35.0% |
| AAAAAAACTCCCCTTCAAGC+TGG | + | chr7.3:6336254-6336273 | MS.gene06982:intron | 40.0% | |
| AAAATGGCTACAGACAGAAC+CGG | - | chr7.3:6335874-6335893 | None:intergenic | 40.0% | |
| AAACTGTATTCACCAGTGGT+GGG | + | chr7.3:6334544-6334563 | MS.gene06982:CDS | 40.0% | |
| AAGAAAGAAAGAATGGAGGG+GGG | + | chr7.3:6337690-6337709 | MS.gene06982:intron | 40.0% | |
| AAGATGGTAGGCTATGTTGT+TGG | + | chr7.3:6338813-6338832 | MS.gene06982:CDS | 40.0% | |
| AAGGGATGATTGGAGTTCAA+TGG | + | chr7.3:6334495-6334514 | MS.gene06982:intron | 40.0% | |
| AATGCCTGAACTATGAACTC+TGG | - | chr7.3:6338774-6338793 | None:intergenic | 40.0% | |
| AATTATCCCAGGTACTCTTG+TGG | + | chr7.3:6335247-6335266 | MS.gene06982:intron | 40.0% | |
| ACATTGAAGTGAGATCCAAG+TGG | - | chr7.3:6338074-6338093 | None:intergenic | 40.0% | |
| AGATGGTACTATCAGGACTT+GGG | + | chr7.3:6334663-6334682 | MS.gene06982:CDS | 40.0% | |
| AGTGAAACGACAACAATTGG+AGG | + | chr7.3:6338689-6338708 | MS.gene06982:CDS | 40.0% | |
| AGTGAAACTGTATTCACCAG+TGG | + | chr7.3:6334540-6334559 | MS.gene06982:CDS | 40.0% | |
| AGTGGAAATTTAGTTGCTGC+GGG | + | chr7.3:6335120-6335139 | MS.gene06982:CDS | 40.0% | |
| AGTTGTAACCCTTTGGTGAA+AGG | + | chr7.3:6335389-6335408 | MS.gene06982:intron | 40.0% | |
| ATATATGCTCCAGCTTGAAG+GGG | - | chr7.3:6336266-6336285 | None:intergenic | 40.0% | |
| ATCAGCCATAGCAAAAAGAG+AGG | - | chr7.3:6337224-6337243 | None:intergenic | 40.0% | |
| ATCGTCGTTAATATCTCCAG+TGG | - | chr7.3:6336423-6336442 | None:intergenic | 40.0% | |
| ATGCCTAGAAGATTCTCATG+TGG | + | chr7.3:6335296-6335315 | MS.gene06982:CDS | 40.0% | |
| ATGTCCAGAGTTCATAGTTC+AGG | + | chr7.3:6338767-6338786 | MS.gene06982:CDS | 40.0% | |
| ATTATCCCAGGTACTCTTGT+GGG | + | chr7.3:6335248-6335267 | MS.gene06982:intron | 40.0% | |
| CATCCACATGAGAATCTTCT+AGG | - | chr7.3:6335302-6335321 | None:intergenic | 40.0% | |
| CATTAGGTCAACATGGCTTT+AGG | + | chr7.3:6335894-6335913 | MS.gene06982:intron | 40.0% | |
| CCATCTGTTAACACTGATGT+CGG | - | chr7.3:6338293-6338312 | None:intergenic | 40.0% | |
| CGCAAACTGCTTATTTATGC+AGG | + | chr7.3:6335936-6335955 | MS.gene06982:intron | 40.0% | |
| CGTTTAACGTTGTTGGGTAT+GGG | - | chr7.3:6334278-6334297 | None:intergenic | 40.0% | |
| CTAAGCTCTTGTTCTTCAGA+TGG | + | chr7.3:6334646-6334665 | MS.gene06982:CDS | 40.0% | |
| CTACTTCATATTGAAGTGCG+TGG | + | chr7.3:6337814-6337833 | MS.gene06982:intron | 40.0% | |
| CTCATTTCTGCTTCAGTTGA+TGG | + | chr7.3:6336377-6336396 | MS.gene06982:CDS | 40.0% | |
| CTGTGTCCGATATTGTTAGT+TGG | + | chr7.3:6335825-6335844 | MS.gene06982:intron | 40.0% | |
| CTGTGTTGTGTAATTATCCC+AGG | + | chr7.3:6335236-6335255 | MS.gene06982:intron | 40.0% | |
| GAAATCTTCAGCTTCTCCAT+TGG | + | chr7.3:6335090-6335109 | MS.gene06982:CDS | 40.0% | |
| GAACTATGAACTCTGGACAT+AGG | - | chr7.3:6338767-6338786 | None:intergenic | 40.0% | |
| GACAAACATCCTTTCACCAA+AGG | - | chr7.3:6335401-6335420 | None:intergenic | 40.0% | |
| GAGAGAGTTATCAGAAGCTT+TGG | + | chr7.3:6336793-6336812 | MS.gene06982:CDS | 40.0% | |
| GCAGCAACTAAATTTCCACT+AGG | - | chr7.3:6335120-6335139 | None:intergenic | 40.0% | |
| GCATAAATAAGCAGTTTGCG+TGG | - | chr7.3:6335936-6335955 | None:intergenic | 40.0% | |
| GGAACATCAATTGCAAAGGT+GGG | + | chr7.3:6336762-6336781 | MS.gene06982:CDS | 40.0% | |
| GGACACAAGAACATTTCAAC+AGG | + | chr7.3:6334684-6334703 | MS.gene06982:CDS | 40.0% | |
| GTTCTTCAGATGGTACTATC+AGG | + | chr7.3:6334656-6334675 | MS.gene06982:CDS | 40.0% | |
| GTTGATGTAAGATCCACGTA+GGG | + | chr7.3:6338231-6338250 | MS.gene06982:intron | 40.0% | |
| TCAAGCAGCAAAGAGATCAT+GGG | - | chr7.3:6335013-6335032 | None:intergenic | 40.0% | |
| TCCACTACAGAGTTCAAAGA+AGG | + | chr7.3:6337470-6337489 | MS.gene06982:intron | 40.0% | |
| TCCTTCTTTGAACTCTGTAG+TGG | - | chr7.3:6337474-6337493 | None:intergenic | 40.0% | |
| TCTTGGGTTCCTAACAATAG+TGG | + | chr7.3:6335721-6335740 | MS.gene06982:intron | 40.0% | |
| TGACACATTAACTGAACACG+TGG | + | chr7.3:6338044-6338063 | MS.gene06982:intron | 40.0% | |
| TGGTGAAAGGATGTTTGTCT+TGG | + | chr7.3:6335402-6335421 | MS.gene06982:intron | 40.0% | |
| TTCTTTGAACTCTGTAGTGG+AGG | - | chr7.3:6337471-6337490 | None:intergenic | 40.0% | |
| TTGATGTAAGATCCACGTAG+GGG | + | chr7.3:6338232-6338251 | MS.gene06982:intron | 40.0% | |
| TTGCTTGTCATGAGACAGAA+TGG | + | chr7.3:6337663-6337682 | MS.gene06982:intron | 40.0% | |
| TTGTGAATGGAAGGGATGAT+TGG | + | chr7.3:6334485-6334504 | MS.gene06982:intron | 40.0% | |
| TTTGACGAAAATTCCAGGAG+AGG | + | chr7.3:6337857-6337876 | MS.gene06982:intron | 40.0% | |
| ! | ATACAAGCTTTTGCTCCACA+AGG | - | chr7.3:6338494-6338513 | None:intergenic | 40.0% |
| ! | CAAGCTTTGACGAAAATTCC+AGG | + | chr7.3:6337852-6337871 | MS.gene06982:intron | 40.0% |
| ! | CTCTTCCTCTCTTTTTGCTA+TGG | + | chr7.3:6337216-6337235 | MS.gene06982:intron | 40.0% |
| ! | CTGAAAAGCACACAAAGCAA+AGG | - | chr7.3:6337775-6337794 | None:intergenic | 40.0% |
| ! | CTGAGGATAGCTTGTGAAAA+CGG | - | chr7.3:6334875-6334894 | None:intergenic | 40.0% |
| ! | CTGGAATTTTCGTCAAAGCT+TGG | - | chr7.3:6337854-6337873 | None:intergenic | 40.0% |
| ! | GTCAACGGAGTGACTATTTT+CGG | - | chr7.3:6338001-6338020 | None:intergenic | 40.0% |
| !! | CAGGTTTGCTTTTCTATTGG+AGG | + | chr7.3:6335153-6335172 | MS.gene06982:intron | 40.0% |
| !! | CCGTTGACTTCTATTGTTAG+AGG | + | chr7.3:6338013-6338032 | MS.gene06982:intron | 40.0% |
| !! | GAAGCCATGATTTCAAGTTG+TGG | - | chr7.3:6337544-6337563 | None:intergenic | 40.0% |
| !! | TTTTGTGTAGCATTTGGGAC+TGG | + | chr7.3:6337272-6337291 | MS.gene06982:intron | 40.0% |
| AAGTCTTCGGATCTCAAGAG+TGG | - | chr7.3:6338158-6338177 | None:intergenic | 45.0% | |
| AATATCCCGAGCCCATTTGT+TGG | - | chr7.3:6335491-6335510 | None:intergenic | 45.0% | |
| ACGTTGTTGGGTATGGGAAA+AGG | - | chr7.3:6334272-6334291 | None:intergenic | 45.0% | |
| AGGAAAGCTCCAAAAGGATC+AGG | - | chr7.3:6337742-6337761 | None:intergenic | 45.0% | |
| ATCTTCAGCTTCTCCATTGG+AGG | + | chr7.3:6335093-6335112 | MS.gene06982:CDS | 45.0% | |
| ATTTCCACTAGGTCCTCCAA+TGG | - | chr7.3:6335109-6335128 | None:intergenic | 45.0% | |
| CAGATGGTACTATCAGGACT+TGG | + | chr7.3:6334662-6334681 | MS.gene06982:CDS | 45.0% | |
| CATATTGAAGTGCGTGGAGT+TGG | + | chr7.3:6337820-6337839 | MS.gene06982:intron | 45.0% | |
| CATTCAACTGAAGCCAAGCA+AGG | - | chr7.3:6336120-6336139 | None:intergenic | 45.0% | |
| CCATAATATTGACCCACCAC+TGG | - | chr7.3:6334559-6334578 | None:intergenic | 45.0% | |
| CCCAACAACGTTAAACGCTT+CGG | + | chr7.3:6334281-6334300 | MS.gene06982:CDS | 45.0% | |
| CCGACATCAGTGTTAACAGA+TGG | + | chr7.3:6338290-6338309 | MS.gene06982:intron | 45.0% | |
| CGTTGATGTAAGATCCACGT+AGG | + | chr7.3:6338230-6338249 | MS.gene06982:intron | 45.0% | |
| CTCAAGCAGCAAAGAGATCA+TGG | - | chr7.3:6335014-6335033 | None:intergenic | 45.0% | |
| CTGATGGAGTTGTAACCCTT+TGG | + | chr7.3:6335382-6335401 | MS.gene06982:intron | 45.0% | |
| GAAACTGTATTCACCAGTGG+TGG | + | chr7.3:6334543-6334562 | MS.gene06982:CDS | 45.0% | |
| GCGTTTAACGTTGTTGGGTA+TGG | - | chr7.3:6334279-6334298 | None:intergenic | 45.0% | |
| GGATGATTGGAGTTCAATGG+CGG | + | chr7.3:6334498-6334517 | MS.gene06982:CDS | 45.0% | |
| GGGAACATCAATTGCAAAGG+TGG | + | chr7.3:6336761-6336780 | MS.gene06982:CDS | 45.0% | |
| TCATGTGGATGATGTCACTC+AGG | + | chr7.3:6335311-6335330 | MS.gene06982:CDS | 45.0% | |
| TGATGTAAGATCCACGTAGG+GGG | + | chr7.3:6338233-6338252 | MS.gene06982:intron | 45.0% | |
| TGATGTCGGAACCTATGATG+TGG | - | chr7.3:6338279-6338298 | None:intergenic | 45.0% | |
| ! | AAACTGCCAACAAATGGGCT+CGG | + | chr7.3:6335482-6335501 | MS.gene06982:intron | 45.0% |
| ! | ACCGAAGCGTTTAACGTTGT+TGG | - | chr7.3:6334285-6334304 | None:intergenic | 45.0% |
| ! | AGCATTTGGGACTGGAAAGA+AGG | + | chr7.3:6337280-6337299 | MS.gene06982:intron | 45.0% |
| ! | ATGAGCTTGCCTTGTTCTTC+AGG | - | chr7.3:6336362-6336381 | None:intergenic | 45.0% |
| ! | CCGAAGCGTTTAACGTTGTT+GGG | - | chr7.3:6334284-6334303 | None:intergenic | 45.0% |
| ! | CGACGATGATCATCTAGAGT+CGG | + | chr7.3:6336436-6336455 | MS.gene06982:CDS | 45.0% |
| ! | GCTCGGGATATTTCTGTAAG+AGG | + | chr7.3:6335499-6335518 | MS.gene06982:intron | 45.0% |
| ! | GCTTTTCTATTGGAGGACCT+TGG | + | chr7.3:6335160-6335179 | MS.gene06982:intron | 45.0% |
| ! | TGAGCTTGCCTTGTTCTTCA+GGG | - | chr7.3:6336361-6336380 | None:intergenic | 45.0% |
| ! | TTGAACTCTGTAGTGGAGGT+TGG | - | chr7.3:6337467-6337486 | None:intergenic | 45.0% |
| !! | ATGGCATTGGTTGAACAAGC+TGG | + | chr7.3:6338437-6338456 | MS.gene06982:intron | 45.0% |
| !! | CATTTTTGGATGGACAGGTG+GGG | + | chr7.3:6338790-6338809 | MS.gene06982:CDS | 45.0% |
| !! | CCAGTGGTGGGTCAATATTA+TGG | + | chr7.3:6334556-6334575 | MS.gene06982:CDS | 45.0% |
| !! | GCATTTTTGGATGGACAGGT+GGG | + | chr7.3:6338789-6338808 | MS.gene06982:CDS | 45.0% |
| !! | GGACGTACTTTGGGATGATT+TGG | - | chr7.3:6334352-6334371 | None:intergenic | 45.0% |
| !! | TCAGGCATTTTTGGATGGAC+AGG | + | chr7.3:6338785-6338804 | MS.gene06982:CDS | 45.0% |
| !! | TGGCATTGGTTGAACAAGCT+GGG | + | chr7.3:6338438-6338457 | MS.gene06982:intron | 45.0% |
| !!! | TTCGAGTGACTGGCTTTTTC+CGG | + | chr7.3:6335852-6335871 | MS.gene06982:intron | 45.0% |
| AAAGCAAAGGCTCTCCTGGA+AGG | - | chr7.3:6337762-6337781 | None:intergenic | 50.0% | |
| ACACAAAGCAAAGGCTCTCC+TGG | - | chr7.3:6337766-6337785 | None:intergenic | 50.0% | |
| AGTTGGAGACTTCGAGTGAC+TGG | + | chr7.3:6335842-6335861 | MS.gene06982:intron | 50.0% | |
| CCATAAGCTCTTGAGGTCTG+AGG | - | chr7.3:6334892-6334911 | None:intergenic | 50.0% | |
| CCTCAGACCTCAAGAGCTTA+TGG | + | chr7.3:6334889-6334908 | MS.gene06982:intron | 50.0% | |
| CCTGGAAGGAAAGCTCCAAA+AGG | - | chr7.3:6337748-6337767 | None:intergenic | 50.0% | |
| GCAGAAGCAATTCTCGAAGG+TGG | + | chr7.3:6338713-6338732 | MS.gene06982:CDS | 50.0% | |
| GGCACAAATGCGGGTACTTT+GGG | + | chr7.3:6338647-6338666 | MS.gene06982:CDS | 50.0% | |
| GGTGCAGAAGCAATTCTCGA+AGG | + | chr7.3:6338710-6338729 | MS.gene06982:CDS | 50.0% | |
| TCGTTGTTCCTCGACATCCA+TGG | - | chr7.3:6334249-6334268 | None:intergenic | 50.0% | |
| TGAACACGTGGTCTTCCACT+TGG | + | chr7.3:6338056-6338075 | MS.gene06982:intron | 50.0% | |
| TGAACATGTAACCCCCTACG+TGG | - | chr7.3:6338247-6338266 | None:intergenic | 50.0% | |
| TGACACATGCACGTTGACAC+CGG | - | chr7.3:6337087-6337106 | None:intergenic | 50.0% | |
| TTCTCCATTGGAGGACCTAG+TGG | + | chr7.3:6335102-6335121 | MS.gene06982:CDS | 50.0% | |
| ! | AACTGCCAACAAATGGGCTC+GGG | + | chr7.3:6335483-6335502 | MS.gene06982:intron | 50.0% |
| ! | ACGCCTTCCATCAGAAGTGT+CGG | - | chr7.3:6336987-6337006 | None:intergenic | 50.0% |
| ! | ATACAAGCTCTAGCCTCTCC+TGG | - | chr7.3:6337873-6337892 | None:intergenic | 50.0% |
| !! | CCAATCCCACAAGAGTACCT+GGG | - | chr7.3:6335256-6335275 | None:intergenic | 50.0% |
| !! | CGGTGCTGCGTTATTATCTC+AGG | - | chr7.3:6337981-6338000 | None:intergenic | 50.0% |
| !! | GGCATTTTTGGATGGACAGG+TGG | + | chr7.3:6338788-6338807 | MS.gene06982:CDS | 50.0% |
| !! | TCCAATCCCACAAGAGTACC+TGG | - | chr7.3:6335257-6335276 | None:intergenic | 50.0% |
| !! | TGTAGCACCGACACTTCTGA+TGG | + | chr7.3:6336977-6336996 | MS.gene06982:intron | 50.0% |
| !!! | CCTTTTGGAGCTTTCCTTCC+AGG | + | chr7.3:6337745-6337764 | MS.gene06982:intron | 50.0% |
| AATTGCGGCCATGGATGTCG+AGG | + | chr7.3:6334238-6334257 | MS.gene06982:CDS | 55.0% | |
| CACTGACACGTGTCGAACAC+CGG | - | chr7.3:6337012-6337031 | None:intergenic | 55.0% | |
| CCCAGGTACTCTTGTGGGAT+TGG | + | chr7.3:6335253-6335272 | MS.gene06982:intron | 55.0% | |
| CGGCACAAATGCGGGTACTT+TGG | + | chr7.3:6338646-6338665 | MS.gene06982:CDS | 55.0% | |
| GTCAGTGTCGTGTCAGTGAC+CGG | - | chr7.3:6337035-6337054 | None:intergenic | 55.0% | |
| GTTGATCGGCGGCACAAATG+CGG | + | chr7.3:6338637-6338656 | MS.gene06982:CDS | 55.0% | |
| TGTTCGACACGTGTCAGTGC+CGG | + | chr7.3:6337013-6337032 | MS.gene06982:intron | 55.0% | |
| TTGATCGGCGGCACAAATGC+GGG | + | chr7.3:6338638-6338657 | MS.gene06982:CDS | 55.0% | |
| ! | CTTCTGATGGAAGGCGTGTC+CGG | + | chr7.3:6336990-6337009 | MS.gene06982:intron | 55.0% |
| ! | GCACCGACACTTCTGATGGA+AGG | + | chr7.3:6336981-6337000 | MS.gene06982:intron | 55.0% |
| ! | TGCTGCGGGTTGTGATTCAC+AGG | + | chr7.3:6335134-6335153 | MS.gene06982:CDS | 55.0% |
| GGACAGGTGGGGAAGATGGT+AGG | + | chr7.3:6338801-6338820 | MS.gene06982:CDS | 60.0% | |
| GGATGGACAGGTGGGGAAGA+TGG | + | chr7.3:6338797-6338816 | MS.gene06982:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6334230 | 6338940 | 6334230 | ID=MS.gene06982 |
| chr7.3 | mRNA | 6334230 | 6338940 | 6334230 | ID=MS.gene06982.t1;Parent=MS.gene06982 |
| chr7.3 | exon | 6334230 | 6334363 | 6334230 | ID=MS.gene06982.t1.exon1;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6334230 | 6334363 | 6334230 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6334498 | 6334705 | 6334498 | ID=MS.gene06982.t1.exon2;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6334498 | 6334705 | 6334498 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6335060 | 6335155 | 6335060 | ID=MS.gene06982.t1.exon3;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6335060 | 6335155 | 6335060 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6335258 | 6335332 | 6335258 | ID=MS.gene06982.t1.exon4;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6335258 | 6335332 | 6335258 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6336347 | 6336457 | 6336347 | ID=MS.gene06982.t1.exon5;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6336347 | 6336457 | 6336347 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6336750 | 6336841 | 6336750 | ID=MS.gene06982.t1.exon6;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6336750 | 6336841 | 6336750 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6337282 | 6337366 | 6337282 | ID=MS.gene06982.t1.exon7;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6337282 | 6337366 | 6337282 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| chr7.3 | exon | 6338587 | 6338940 | 6338587 | ID=MS.gene06982.t1.exon8;Parent=MS.gene06982.t1 |
| chr7.3 | CDS | 6338587 | 6338940 | 6338587 | ID=cds.MS.gene06982.t1;Parent=MS.gene06982.t1 |
| Gene Sequence |
| Protein sequence |
