AlfalfaGEDB | MS.gene074462

M. sativa cultivar XinJiangDaYe / MS.gene074462

KEGG: -
GO: -
PFAM: PF13837.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074462.t1	XP_003627372.1	86.2	349	42	3	1	348	1	344	2.70E-143	518.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074462.t1	Q9LJG8	41.5	405	113	13	1	308	1	378	6.0e-43	176.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074462.t1	G7L8C7	86.2	349	42	3	1	348	1	344	1.9e-143	518.5

TFs/TRs:

Gene ID	Type	Classification
MS.gene074462.t1	TF	Trihelix

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049142	MS.gene074462	0.801949	7.07E-49	-1.69E-46
MS.gene049159	MS.gene074462	0.810388	1.18E-50	-1.69E-46
MS.gene049368	MS.gene074462	0.805866	1.09E-49	-1.69E-46
MS.gene049983	MS.gene074462	0.805225	1.48E-49	-1.69E-46
MS.gene050084	MS.gene074462	0.820973	5.17E-53	-1.69E-46
MS.gene050085	MS.gene074462	0.836246	1.05E-56	-1.69E-46
MS.gene050317	MS.gene074462	0.824047	9.97E-54	-1.69E-46
MS.gene050361	MS.gene074462	0.811029	8.59E-51	-1.69E-46
MS.gene050384	MS.gene074462	0.802747	4.85E-49	-1.69E-46
MS.gene050386	MS.gene074462	0.823863	1.10E-53	-1.69E-46
MS.gene050654	MS.gene074462	0.839479	1.55E-57	-1.69E-46
MS.gene050762	MS.gene074462	0.815709	8.05E-52	-1.69E-46
MS.gene050763	MS.gene074462	0.815987	6.97E-52	-1.69E-46
MS.gene050941	MS.gene074462	0.812687	3.74E-51	-1.69E-46
MS.gene051003	MS.gene074462	0.801148	1.03E-48	-1.69E-46
MS.gene051066	MS.gene074462	0.840176	1.02E-57	-1.69E-46
MS.gene051328	MS.gene074462	0.819463	1.15E-52	-1.69E-46
MS.gene051363	MS.gene074462	0.827322	1.67E-54	-1.69E-46
MS.gene051365	MS.gene074462	0.803546	3.31E-49	-1.69E-46
MS.gene051856	MS.gene074462	0.802443	5.60E-49	-1.69E-46
MS.gene05188	MS.gene074462	0.811771	5.93E-51	-1.69E-46
MS.gene051975	MS.gene074462	0.800559	1.36E-48	-1.69E-46
MS.gene052342	MS.gene074462	0.820265	7.52E-53	-1.69E-46
MS.gene052434	MS.gene074462	0.82809	1.09E-54	-1.69E-46
MS.gene053008	MS.gene074462	0.833518	5.09E-56	-1.69E-46
MS.gene053058	MS.gene074462	0.843187	1.63E-58	-1.69E-46
MS.gene053931	MS.gene074462	0.805218	1.48E-49	-1.69E-46
MS.gene054379	MS.gene074462	0.820961	5.20E-53	-1.69E-46
MS.gene054657	MS.gene074462	0.803404	3.54E-49	-1.69E-46
MS.gene054823	MS.gene074462	0.813694	2.25E-51	-1.69E-46
MS.gene05517	MS.gene074462	0.835306	1.81E-56	-1.69E-46
MS.gene055311	MS.gene074462	0.837656	4.57E-57	-1.69E-46
MS.gene055313	MS.gene074462	0.812416	4.29E-51	-1.69E-46
MS.gene055314	MS.gene074462	0.820807	5.64E-53	-1.69E-46
MS.gene055513	MS.gene074462	0.801577	8.43E-49	-1.69E-46
MS.gene055623	MS.gene074462	0.807796	4.24E-50	-1.69E-46
MS.gene055926	MS.gene074462	0.80782	4.19E-50	-1.69E-46
MS.gene056045	MS.gene074462	0.858672	7.01E-63	-1.69E-46
MS.gene056097	MS.gene074462	0.804218	2.40E-49	-1.69E-46
MS.gene056181	MS.gene074462	0.869924	2.15E-66	-1.69E-46
MS.gene056787	MS.gene074462	0.830918	2.24E-55	-1.69E-46
MS.gene056831	MS.gene074462	0.818739	1.67E-52	-1.69E-46
MS.gene05781	MS.gene074462	0.822011	2.98E-53	-1.69E-46
MS.gene058126	MS.gene074462	0.822208	2.68E-53	-1.69E-46
MS.gene058292	MS.gene074462	0.810557	1.09E-50	-1.69E-46
MS.gene058595	MS.gene074462	0.829381	5.31E-55	-1.69E-46
MS.gene058646	MS.gene074462	0.821716	3.48E-53	-1.69E-46
MS.gene059146	MS.gene074462	0.804642	1.96E-49	-1.69E-46
MS.gene059725	MS.gene074462	0.803885	2.82E-49	-1.69E-46
MS.gene059842	MS.gene074462	0.803394	3.56E-49	-1.69E-46
MS.gene06010	MS.gene074462	0.815203	1.04E-51	-1.69E-46
MS.gene060296	MS.gene074462	0.864137	1.51E-64	-1.69E-46
MS.gene060802	MS.gene074462	0.821071	4.91E-53	-1.69E-46
MS.gene060803	MS.gene074462	0.819398	1.19E-52	-1.69E-46
MS.gene060869	MS.gene074462	0.824008	1.02E-53	-1.69E-46
MS.gene060870	MS.gene074462	0.839023	2.03E-57	-1.69E-46
MS.gene060998	MS.gene074462	0.81097	8.84E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074462.t1	MTR_8g022290	94.556	349	13	3	1	348	1	344	0.0	582
MS.gene074462.t1	MTR_2g016140	59.804	102	37	2	66	166	19	117	3.94e-36	134
MS.gene074462.t1	MTR_2g016140	50.649	77	35	1	267	343	236	309	5.42e-18	84.3
MS.gene074462.t1	MTR_2g016140	59.804	102	37	2	66	166	19	117	5.66e-36	134
MS.gene074462.t1	MTR_2g016140	48.837	86	40	2	267	352	236	317	8.87e-18	84.0
MS.gene074462.t1	MTR_4g079960	46.541	159	51	5	21	174	5	134	5.39e-35	130
MS.gene074462.t1	MTR_4g079960	54.688	64	29	0	280	343	234	297	5.46e-17	81.3
MS.gene074462.t1	MTR_4g079960	46.541	159	51	5	21	174	5	134	7.35e-35	130
MS.gene074462.t1	MTR_4g079960	54.688	64	29	0	280	343	234	297	7.62e-17	80.9
MS.gene074462.t1	MTR_4g079960	46.541	159	51	5	21	174	5	134	8.77e-35	130
MS.gene074462.t1	MTR_4g079960	54.688	64	29	0	280	343	234	297	7.94e-17	80.9
MS.gene074462.t1	MTR_2g102227	29.889	271	136	8	70	338	274	492	5.25e-23	100
MS.gene074462.t1	MTR_3g014280	26.837	313	166	12	54	337	21	299	7.33e-19	86.7
MS.gene074462.t1	MTR_2g092960	34.320	169	82	7	7	171	4	147	7.08e-18	85.9
MS.gene074462.t1	MTR_6g486270	35.000	100	60	2	70	169	130	224	4.56e-16	79.3
MS.gene074462.t1	MTR_1g037650	36.066	122	68	2	54	174	21	133	7.24e-15	72.8
MS.gene074462.t1	MTR_1g061600	35.000	100	58	3	66	165	130	222	8.65e-15	75.9
MS.gene074462.t1	MTR_4g117990	33.684	95	61	1	69	163	43	135	8.50e-14	72.0
MS.gene074462.t1	MTR_7g081190	30.208	96	66	1	69	163	45	140	7.39e-11	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene074462.t1	AT3G14180	46.602	412	122	13	34	357	24	425	5.16e-96	293
MS.gene074462.t1	AT1G54060	39.012	405	181	12	1	361	1	383	1.45e-57	192
MS.gene074462.t1	AT3G11100	41.343	283	105	7	64	342	16	241	3.78e-47	161
MS.gene074462.t1	AT5G05550	38.832	291	115	8	65	353	19	248	6.20e-46	158
MS.gene074462.t1	AT5G05550	39.161	286	111	8	65	348	19	243	1.01e-44	154
MS.gene074462.t1	AT5G05550	39.493	276	105	7	65	338	19	234	1.37e-44	154
MS.gene074462.t1	AT3G58630	47.333	150	63	5	66	203	22	167	1.33e-32	124
MS.gene074462.t1	AT3G58630	47.333	150	63	5	66	203	22	167	1.38e-32	124
MS.gene074462.t1	AT3G10030	37.168	113	65	2	70	182	161	267	1.69e-18	87.4
MS.gene074462.t1	AT3G10030	37.168	113	65	2	70	182	161	267	2.00e-18	87.0
MS.gene074462.t1	AT3G24490	34.959	123	72	3	70	191	90	205	2.19e-17	82.8
MS.gene074462.t1	AT3G54390	26.354	277	163	11	66	337	34	274	1.13e-16	80.1
MS.gene074462.t1	AT3G54390	38.384	99	52	1	66	164	50	139	1.60e-16	80.1
MS.gene074462.t1	AT2G44730	33.684	95	61	1	69	163	63	155	6.35e-13	69.7
MS.gene074462.t1	AT3G24860	28.800	125	67	3	39	163	45	147	2.94e-12	67.4

Find 105 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACACAGGCAATTGTGAAATT+TGG	0.247863	8.2:+73412913	MS.gene074462:CDS
GATCGCTTAGATCAGTTAAT+TGG	0.270226	8.2:+73412535	MS.gene074462:CDS
GATGAAGTTTGCTAAGGATT+TGG	0.272524	8.2:+73412999	MS.gene074462:CDS
GCCAAGGTTAGTGGTGTTTC+CGG	0.291008	8.2:+73412565	MS.gene074462:CDS
CACTGTCACTGTTATTGTTA+TGG	0.294667	8.2:-73413167	None:intergenic
CTGTGACAAATGACTGTTTC+CGG	0.295901	8.2:-73412599	None:intergenic
TTCGGTGACGGTTGCGGCAC+CGG	0.338241	8.2:+73412171	MS.gene074462:CDS
GAGGTTGCGGAGATTGTTAA+TGG	0.341472	8.2:+73412364	MS.gene074462:CDS
TCCATCTCCGGTGTCGTCTC+CGG	0.352746	8.2:+73412132	MS.gene074462:CDS
AAATTCGAAGGGGAGAGGTT+GGG	0.373866	8.2:+73412870	MS.gene074462:CDS
CCTGTTGGTATTCGCGCCTC+TGG	0.397120	8.2:+73412643	MS.gene074462:CDS
GTGGAGGGAGGGAGGATTGT+TGG	0.405449	8.2:+73412251	MS.gene074462:CDS
CCATCTCCGGTGTCGTCTCC+GGG	0.410853	8.2:+73412133	MS.gene074462:CDS
TGGAGCTAGAGGCGCGAATC+AGG	0.413061	8.2:+73412663	MS.gene074462:CDS
GGGAGCGATTGGTCGGATTT+CGG	0.414040	8.2:+73412153	MS.gene074462:CDS
AGCGTGGGGAGAGAGGTATT+TGG	0.415050	8.2:+73412303	MS.gene074462:CDS
AATTCGAAGGGGAGAGGTTG+GGG	0.424508	8.2:+73412871	MS.gene074462:CDS
GGCGGTGTTGATTGAAGCGT+GGG	0.449332	8.2:+73412288	MS.gene074462:CDS
AATGCATAGCTGTTCGCCGC+CGG	0.453869	8.2:-73412190	None:intergenic
GGTCCAGCTGCCAAGGTTAG+TGG	0.455964	8.2:+73412556	MS.gene074462:CDS
GAGGTTGGGGAAGTGCGGTG+AGG	0.461820	8.2:+73412884	MS.gene074462:CDS
ATCATAAAACCGCCAAGTGC+TGG	0.465166	8.2:-73412515	None:intergenic
AGGTTGGGGAAGTGCGGTGA+GGG	0.465619	8.2:+73412885	MS.gene074462:CDS
ATCGAAGTTGCAGCAGGTGG+TGG	0.468907	8.2:+73412960	MS.gene074462:CDS
TCGGATTTCGGTGACGGTTG+CGG	0.473604	8.2:+73412165	MS.gene074462:CDS
CAAATTCGAAGGGGAGAGGT+TGG	0.478124	8.2:+73412869	MS.gene074462:CDS
GCGGAGATTGTTAATGGAAG+AGG	0.480346	8.2:+73412370	MS.gene074462:CDS
CTGATATTCAGTGTAAGAAT+CGG	0.482219	8.2:+73412416	MS.gene074462:CDS
CCAGAGGCGCGAATACCAAC+AGG	0.485804	8.2:-73412643	None:intergenic
GAGATTTCACAGTTGAAACT+TGG	0.487399	8.2:+73413060	MS.gene074462:CDS
GGCGAGTGGTTCTCCATCTC+CGG	0.489845	8.2:+73412120	MS.gene074462:CDS
GGTTAAGAAGAAGTATAAAT+CGG	0.490848	8.2:+73412447	MS.gene074462:CDS
GGAATTTGAAGCAGAAGCAT+TGG	0.493242	8.2:+73412338	MS.gene074462:CDS
GCTCTCTTCCTCTCCGGTGG+TGG	0.494319	8.2:-73412826	None:intergenic
GTTGCAGCAGGTGGTGGAGA+TGG	0.496264	8.2:+73412966	MS.gene074462:CDS
GATTGGTCGGATTTCGGTGA+CGG	0.496880	8.2:+73412159	MS.gene074462:CDS
GAATTTGAATTCAAATTCGA+AGG	0.497730	8.2:+73412858	MS.gene074462:CDS
ATCGGTGCTGGAAGTAGCTC+CGG	0.497920	8.2:+73412481	MS.gene074462:CDS
GAGAAAGCTAAGATCGGTGC+TGG	0.500736	8.2:+73412469	MS.gene074462:CDS
ATGACTGTTTCCGGTATGAC+TGG	0.507321	8.2:-73412590	None:intergenic
CCACGTGTCGTATTCTGAAT+CGG	0.509196	8.2:-73412220	None:intergenic
ACTTTCGCTCTCTTCCTCTC+CGG	0.511815	8.2:-73412832	None:intergenic
GTGTCGTCTCCGGGAGCGAT+TGG	0.513535	8.2:+73412142	MS.gene074462:CDS
ACACCACTAACCTTGGCAGC+TGG	0.516535	8.2:-73412559	None:intergenic
AATTCAAATTCGAAGGGGAG+AGG	0.518146	8.2:+73412865	MS.gene074462:CDS
TGGAAGCAACGGTGGAGGGA+GGG	0.519025	8.2:+73412240	MS.gene074462:CDS
TCAGGTTAATTCGCAGAAGA+AGG	0.520253	8.2:+73412681	MS.gene074462:CDS
GGTATTTGGAATTGAGCAGA+GGG	0.520971	8.2:+73412317	MS.gene074462:CDS
GAAGCATTGGAAAGAGGTTG+CGG	0.521472	8.2:+73412351	MS.gene074462:CDS
GGAGAACCACTCGCCGGAGA+TGG	0.523745	8.2:-73412112	None:intergenic
GAAGCAGAAGCATTGGAAAG+AGG	0.525294	8.2:+73412345	MS.gene074462:CDS
CCCGGAGACGACACCGGAGA+TGG	0.529470	8.2:-73412133	None:intergenic
TCACAGCAGAAAGTTCCGTT+AGG	0.530119	8.2:+73412616	MS.gene074462:CDS
GCAGAGGATGAAGTTTGCTA+AGG	0.530659	8.2:+73412993	MS.gene074462:CDS
GTTAATTGGTCCAGCTGCCA+AGG	0.544230	8.2:+73412549	MS.gene074462:CDS
GTGGAAGCAACGGTGGAGGG+AGG	0.547610	8.2:+73412239	MS.gene074462:CDS
CACGTGGAAGCAACGGTGGA+GGG	0.548507	8.2:+73412236	MS.gene074462:CDS
GTGTAAGAATCGGATTGATA+CGG	0.548630	8.2:+73412426	MS.gene074462:CDS
GAAATCCGACCAATCGCTCC+CGG	0.555500	8.2:-73412151	None:intergenic
TTCGCTCTCTTCCTCTCCGG+TGG	0.556083	8.2:-73412829	None:intergenic
GGAGACATCGAAGTTGCAGC+AGG	0.559864	8.2:+73412954	MS.gene074462:CDS
AATACGACACGTGGAAGCAA+CGG	0.563694	8.2:+73412229	MS.gene074462:CDS
ACCGGAAACACCACTAACCT+TGG	0.565369	8.2:-73412566	None:intergenic
AGGTATTTGGAATTGAGCAG+AGG	0.565655	8.2:+73412316	MS.gene074462:CDS
TGGTGGAGATGGAGAAGCAG+AGG	0.566345	8.2:+73412977	MS.gene074462:CDS
TGATTGAAGCGTGGGGAGAG+AGG	0.567107	8.2:+73412296	MS.gene074462:CDS
GGGGAGAGGTTGGGGAAGTG+CGG	0.570094	8.2:+73412879	MS.gene074462:CDS
GTGTTACAACCAGCACTTGG+CGG	0.570584	8.2:+73412506	MS.gene074462:CDS
CGGCGGTGTTGATTGAAGCG+TGG	0.570892	8.2:+73412287	MS.gene074462:CDS
GTTTCCGGTATGACTGGTAC+CGG	0.572913	8.2:-73412584	None:intergenic
CGTCTCCGGGAGCGATTGGT+CGG	0.573691	8.2:+73412146	MS.gene074462:CDS
AATTTGAATTCAAATTCGAA+GGG	0.573920	8.2:+73412859	MS.gene074462:CDS
ACACGTGGAAGCAACGGTGG+AGG	0.578608	8.2:+73412235	MS.gene074462:CDS
GTTTCCGGTACCAGTCATAC+CGG	0.579315	8.2:+73412580	MS.gene074462:CDS
ATCGCTCCCGGAGACGACAC+CGG	0.579629	8.2:-73412139	None:intergenic
GACATCGAAGTTGCAGCAGG+TGG	0.591011	8.2:+73412957	MS.gene074462:CDS
AGTGCTGGTTGTAACACCGC+CGG	0.591035	8.2:-73412500	None:intergenic
GCGGTGTTACAACCAGCACT+TGG	0.592137	8.2:+73412503	MS.gene074462:CDS
TTGTTGGAGCGAAGCAGCGA+CGG	0.593492	8.2:+73412267	MS.gene074462:CDS
AAGCGACAGTTTACCACCAC+CGG	0.595248	8.2:+73412813	MS.gene074462:CDS
AAGCAACGGTGGAGGGAGGG+AGG	0.596019	8.2:+73412243	MS.gene074462:CDS
GATCCACTCGAATCCATCTC+CGG	0.596077	8.2:+73412099	MS.gene074462:CDS
TGAGAAAGAAGCGTTGTCAC+CGG	0.599383	8.2:+73412786	MS.gene074462:CDS
TGCGGTGAGGGAATTGACAC+AGG	0.608776	8.2:+73412897	MS.gene074462:CDS
ATTCGCGCCTCTGGAGCTAG+AGG	0.614912	8.2:+73412652	MS.gene074462:CDS
TGGTGAAGCTTATGAACAAG+CGG	0.615901	8.2:+73412933	MS.gene074462:CDS
TCGAATCCATCTCCGGCGAG+TGG	0.616080	8.2:+73412106	MS.gene074462:CDS
AAATCGGAGAAAGCTAAGAT+CGG	0.619321	8.2:+73412463	MS.gene074462:CDS
GGTGACGGTTGCGGCACCGG+CGG	0.620431	8.2:+73412174	MS.gene074462:CDS
GTTCCGTTAGGAATTCCTGT+TGG	0.621548	8.2:+73412628	MS.gene074462:CDS
TTGGAGCGAAGCAGCGACGG+CGG	0.631965	8.2:+73412270	MS.gene074462:CDS
GGAGATGGAGAACCACTCGC+CGG	0.634434	8.2:-73412118	None:intergenic
GGTAAACTGTCGCTTGACAC+CGG	0.634602	8.2:-73412805	None:intergenic
ATTCGCGCCTCTAGCTCCAG+AGG	0.645061	8.2:-73412659	None:intergenic
ACGACACGTGGAAGCAACGG+TGG	0.649070	8.2:+73412232	MS.gene074462:CDS
GGTGCTGGAAGTAGCTCCGG+CGG	0.655021	8.2:+73412484	MS.gene074462:CDS
ATTTGAATTCAAATTCGAAG+GGG	0.662082	8.2:+73412860	MS.gene074462:CDS
GAATTCAGCTCAGAAACTCG+TGG	0.662284	8.2:-73412748	None:intergenic
CCGATTCAGAATACGACACG+TGG	0.663489	8.2:+73412220	MS.gene074462:CDS
ATACCAACAGGAATTCCTAA+CGG	0.670478	8.2:-73412631	None:intergenic
TGACGACGACGAGATCCACT+CGG	0.675122	8.2:+73412069	MS.gene074462:CDS
TCGCCGGAGATGGATTCGAG+TGG	0.676446	8.2:-73412102	None:intergenic
ACAGTTTACCACCACCGGAG+AGG	0.677094	8.2:+73412818	MS.gene074462:CDS
GCGGTGTTGATTGAAGCGTG+GGG	0.735042	8.2:+73412289	MS.gene074462:CDS
AGTGGATCGAGTTAGCCGAG+TGG	0.772731	8.2:-73412084	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTTGAATTCAAATTCGAA+GGG	+	chr8.2:73412859-73412878	MS.gene074462:CDS	20.0%
!!!	AGAAAAAGTGTTAATGTTAA+TGG	+	chr8.2:73413084-73413103	MS.gene074462:CDS	20.0%
!	ATTTGAATTCAAATTCGAAG+GGG	+	chr8.2:73412860-73412879	MS.gene074462:CDS	25.0%
!	GAATTTGAATTCAAATTCGA+AGG	+	chr8.2:73412858-73412877	MS.gene074462:CDS	25.0%
!!	GGTTAAGAAGAAGTATAAAT+CGG	+	chr8.2:73412447-73412466	MS.gene074462:CDS	25.0%
!!	TTACACTGAATATCAGTTTT+CGG	-	chr8.2:73412412-73412431	None:intergenic	25.0%
	CTGATATTCAGTGTAAGAAT+CGG	+	chr8.2:73412416-73412435	MS.gene074462:CDS	30.0%
	AAATCGGAGAAAGCTAAGAT+CGG	+	chr8.2:73412463-73412482	MS.gene074462:CDS	35.0%
	ACACAGGCAATTGTGAAATT+TGG	+	chr8.2:73412913-73412932	MS.gene074462:CDS	35.0%
	ATACCAACAGGAATTCCTAA+CGG	-	chr8.2:73412634-73412653	None:intergenic	35.0%
	CACTGTCACTGTTATTGTTA+TGG	-	chr8.2:73413170-73413189	None:intergenic	35.0%
	GAGATTTCACAGTTGAAACT+TGG	+	chr8.2:73413060-73413079	MS.gene074462:CDS	35.0%
	GATCGCTTAGATCAGTTAAT+TGG	+	chr8.2:73412535-73412554	MS.gene074462:CDS	35.0%
	GTGTAAGAATCGGATTGATA+CGG	+	chr8.2:73412426-73412445	MS.gene074462:CDS	35.0%
!	GCAGTTTTTCATGAAAACTC+AGG	+	chr8.2:73413035-73413054	MS.gene074462:CDS	35.0%
!!	GATGAAGTTTGCTAAGGATT+TGG	+	chr8.2:73412999-73413018	MS.gene074462:CDS	35.0%
	AATTCAAATTCGAAGGGGAG+AGG	+	chr8.2:73412865-73412884	MS.gene074462:CDS	40.0%
	CTGTGACAAATGACTGTTTC+CGG	-	chr8.2:73412602-73412621	None:intergenic	40.0%
	TCAGGTTAATTCGCAGAAGA+AGG	+	chr8.2:73412681-73412700	MS.gene074462:CDS	40.0%
	TGGTGAAGCTTATGAACAAG+CGG	+	chr8.2:73412933-73412952	MS.gene074462:CDS	40.0%
!	AGGTATTTGGAATTGAGCAG+AGG	+	chr8.2:73412316-73412335	MS.gene074462:CDS	40.0%
!	GCTATTGTTGTTGTTGTTGC+TGG	-	chr8.2:73413145-73413164	None:intergenic	40.0%
!	GGAATTTGAAGCAGAAGCAT+TGG	+	chr8.2:73412338-73412357	MS.gene074462:CDS	40.0%
!	GGTATTTGGAATTGAGCAGA+GGG	+	chr8.2:73412317-73412336	MS.gene074462:CDS	40.0%
	AAATTCGAAGGGGAGAGGTT+GGG	+	chr8.2:73412870-73412889	MS.gene074462:CDS	45.0%
	AATACGACACGTGGAAGCAA+CGG	+	chr8.2:73412229-73412248	MS.gene074462:CDS	45.0%
	ATCATAAAACCGCCAAGTGC+TGG	-	chr8.2:73412518-73412537	None:intergenic	45.0%
	ATGACTGTTTCCGGTATGAC+TGG	-	chr8.2:73412593-73412612	None:intergenic	45.0%
	CCACGTGTCGTATTCTGAAT+CGG	-	chr8.2:73412223-73412242	None:intergenic	45.0%
	GAATTCAGCTCAGAAACTCG+TGG	-	chr8.2:73412751-73412770	None:intergenic	45.0%
	GAGGTTGCGGAGATTGTTAA+TGG	+	chr8.2:73412364-73412383	MS.gene074462:CDS	45.0%
	GCGGAGATTGTTAATGGAAG+AGG	+	chr8.2:73412370-73412389	MS.gene074462:CDS	45.0%
	GTTCCGTTAGGAATTCCTGT+TGG	+	chr8.2:73412628-73412647	MS.gene074462:CDS	45.0%
	TCACAGCAGAAAGTTCCGTT+AGG	+	chr8.2:73412616-73412635	MS.gene074462:CDS	45.0%
!!	GAAGCAGAAGCATTGGAAAG+AGG	+	chr8.2:73412345-73412364	MS.gene074462:CDS	45.0%
!!	GAAGCATTGGAAAGAGGTTG+CGG	+	chr8.2:73412351-73412370	MS.gene074462:CDS	45.0%
!!	GCAGAGGATGAAGTTTGCTA+AGG	+	chr8.2:73412993-73413012	MS.gene074462:CDS	45.0%
!!	TGAGAAAGAAGCGTTGTCAC+CGG	+	chr8.2:73412786-73412805	MS.gene074462:CDS	45.0%
	AAGCGACAGTTTACCACCAC+CGG	+	chr8.2:73412813-73412832	MS.gene074462:CDS	50.0%
	AATTCGAAGGGGAGAGGTTG+GGG	+	chr8.2:73412871-73412890	MS.gene074462:CDS	50.0%
	ACCGGAAACACCACTAACCT+TGG	-	chr8.2:73412569-73412588	None:intergenic	50.0%
	ACTTTCGCTCTCTTCCTCTC+CGG	-	chr8.2:73412835-73412854	None:intergenic	50.0%
	CAAATTCGAAGGGGAGAGGT+TGG	+	chr8.2:73412869-73412888	MS.gene074462:CDS	50.0%
	CCGATTCAGAATACGACACG+TGG	+	chr8.2:73412220-73412239	MS.gene074462:CDS	50.0%
	GAGAAAGCTAAGATCGGTGC+TGG	+	chr8.2:73412469-73412488	MS.gene074462:CDS	50.0%
	GATCCACTCGAATCCATCTC+CGG	+	chr8.2:73412099-73412118	MS.gene074462:CDS	50.0%
	GCCAAGGTTAGTGGTGTTTC+CGG	+	chr8.2:73412565-73412584	MS.gene074462:CDS	50.0%
	GTGTTACAACCAGCACTTGG+CGG	+	chr8.2:73412506-73412525	MS.gene074462:CDS	50.0%
	GTTAATTGGTCCAGCTGCCA+AGG	+	chr8.2:73412549-73412568	MS.gene074462:CDS	50.0%
	GTTTCCGGTACCAGTCATAC+CGG	+	chr8.2:73412580-73412599	MS.gene074462:CDS	50.0%
	GTTTCCGGTATGACTGGTAC+CGG	-	chr8.2:73412587-73412606	None:intergenic	50.0%
!	GATTGGTCGGATTTCGGTGA+CGG	+	chr8.2:73412159-73412178	MS.gene074462:CDS	50.0%
!	GGTAAACTGTCGCTTGACAC+CGG	-	chr8.2:73412808-73412827	None:intergenic	50.0%
	AATGCATAGCTGTTCGCCGC+CGG	-	chr8.2:73412193-73412212	None:intergenic	55.0%
	ACACCACTAACCTTGGCAGC+TGG	-	chr8.2:73412562-73412581	None:intergenic	55.0%
	ACAGTTTACCACCACCGGAG+AGG	+	chr8.2:73412818-73412837	MS.gene074462:CDS	55.0%
	AGTGGATCGAGTTAGCCGAG+TGG	-	chr8.2:73412087-73412106	None:intergenic	55.0%
	ATCGAAGTTGCAGCAGGTGG+TGG	+	chr8.2:73412960-73412979	MS.gene074462:CDS	55.0%
	GAAATCCGACCAATCGCTCC+CGG	-	chr8.2:73412154-73412173	None:intergenic	55.0%
	GACATCGAAGTTGCAGCAGG+TGG	+	chr8.2:73412957-73412976	MS.gene074462:CDS	55.0%
	GGAGACATCGAAGTTGCAGC+AGG	+	chr8.2:73412954-73412973	MS.gene074462:CDS	55.0%
	TGACGACGACGAGATCCACT+CGG	+	chr8.2:73412069-73412088	MS.gene074462:CDS	55.0%
	TGATTGAAGCGTGGGGAGAG+AGG	+	chr8.2:73412296-73412315	MS.gene074462:CDS	55.0%
	TGCGGTGAGGGAATTGACAC+AGG	+	chr8.2:73412897-73412916	MS.gene074462:CDS	55.0%
	TGGTGGAGATGGAGAAGCAG+AGG	+	chr8.2:73412977-73412996	MS.gene074462:CDS	55.0%
	TTGTTGGAGCGAAGCAGCGA+CGG	+	chr8.2:73412267-73412286	MS.gene074462:CDS	55.0%
!	GGGAGCGATTGGTCGGATTT+CGG	+	chr8.2:73412153-73412172	MS.gene074462:CDS	55.0%
!	TCGGATTTCGGTGACGGTTG+CGG	+	chr8.2:73412165-73412184	MS.gene074462:CDS	55.0%
!!	AGCGTGGGGAGAGAGGTATT+TGG	+	chr8.2:73412303-73412322	MS.gene074462:CDS	55.0%
!!	AGTGCTGGTTGTAACACCGC+CGG	-	chr8.2:73412503-73412522	None:intergenic	55.0%
!!	ATCGGTGCTGGAAGTAGCTC+CGG	+	chr8.2:73412481-73412500	MS.gene074462:CDS	55.0%
!!	GCGGTGTTACAACCAGCACT+TGG	+	chr8.2:73412503-73412522	MS.gene074462:CDS	55.0%
!!	GCGGTGTTGATTGAAGCGTG+GGG	+	chr8.2:73412289-73412308	MS.gene074462:CDS	55.0%
!!	GGCGGTGTTGATTGAAGCGT+GGG	+	chr8.2:73412288-73412307	MS.gene074462:CDS	55.0%
	ACACGTGGAAGCAACGGTGG+AGG	+	chr8.2:73412235-73412254	MS.gene074462:CDS	60.0%
	ACGACACGTGGAAGCAACGG+TGG	+	chr8.2:73412232-73412251	MS.gene074462:CDS	60.0%
	CACGTGGAAGCAACGGTGGA+GGG	+	chr8.2:73412236-73412255	MS.gene074462:CDS	60.0%
	CCTGTTGGTATTCGCGCCTC+TGG	+	chr8.2:73412643-73412662	MS.gene074462:CDS	60.0%
	GGAGATGGAGAACCACTCGC+CGG	-	chr8.2:73412121-73412140	None:intergenic	60.0%
	GGCGAGTGGTTCTCCATCTC+CGG	+	chr8.2:73412120-73412139	MS.gene074462:CDS	60.0%
	GGTCCAGCTGCCAAGGTTAG+TGG	+	chr8.2:73412556-73412575	MS.gene074462:CDS	60.0%
	GTGGAGGGAGGGAGGATTGT+TGG	+	chr8.2:73412251-73412270	MS.gene074462:CDS	60.0%
	TCGAATCCATCTCCGGCGAG+TGG	+	chr8.2:73412106-73412125	MS.gene074462:CDS	60.0%
	TGGAAGCAACGGTGGAGGGA+GGG	+	chr8.2:73412240-73412259	MS.gene074462:CDS	60.0%
	TTCGCTCTCTTCCTCTCCGG+TGG	-	chr8.2:73412832-73412851	None:intergenic	60.0%
!	AGGTTGGGGAAGTGCGGTGA+GGG	+	chr8.2:73412885-73412904	MS.gene074462:CDS	60.0%
!	ATTCGCGCCTCTAGCTCCAG+AGG	-	chr8.2:73412662-73412681	None:intergenic	60.0%
!	CCAGAGGCGCGAATACCAAC+AGG	-	chr8.2:73412646-73412665	None:intergenic	60.0%
!	TCGCCGGAGATGGATTCGAG+TGG	-	chr8.2:73412105-73412124	None:intergenic	60.0%
!	TGGAGCTAGAGGCGCGAATC+AGG	+	chr8.2:73412663-73412682	MS.gene074462:CDS	60.0%
!!	ATTCGCGCCTCTGGAGCTAG+AGG	+	chr8.2:73412652-73412671	MS.gene074462:CDS	60.0%
!!	CGGCGGTGTTGATTGAAGCG+TGG	+	chr8.2:73412287-73412306	MS.gene074462:CDS	60.0%
!!	GTTGCAGCAGGTGGTGGAGA+TGG	+	chr8.2:73412966-73412985	MS.gene074462:CDS	60.0%
!!	TCCATCTCCGGTGTCGTCTC+CGG	+	chr8.2:73412132-73412151	MS.gene074462:CDS	60.0%
	AAGCAACGGTGGAGGGAGGG+AGG	+	chr8.2:73412243-73412262	MS.gene074462:CDS	65.0%
	ATCGCTCCCGGAGACGACAC+CGG	-	chr8.2:73412142-73412161	None:intergenic	65.0%
	CGTCTCCGGGAGCGATTGGT+CGG	+	chr8.2:73412146-73412165	MS.gene074462:CDS	65.0%
	GCTCTCTTCCTCTCCGGTGG+TGG	-	chr8.2:73412829-73412848	None:intergenic	65.0%
	GGAGAACCACTCGCCGGAGA+TGG	-	chr8.2:73412115-73412134	None:intergenic	65.0%
	GGGGAGAGGTTGGGGAAGTG+CGG	+	chr8.2:73412879-73412898	MS.gene074462:CDS	65.0%
	GTGGAAGCAACGGTGGAGGG+AGG	+	chr8.2:73412239-73412258	MS.gene074462:CDS	65.0%
	GTGTCGTCTCCGGGAGCGAT+TGG	+	chr8.2:73412142-73412161	MS.gene074462:CDS	65.0%
	TTGGAGCGAAGCAGCGACGG+CGG	+	chr8.2:73412270-73412289	MS.gene074462:CDS	65.0%
!	GAGGTTGGGGAAGTGCGGTG+AGG	+	chr8.2:73412884-73412903	MS.gene074462:CDS	65.0%
!	GGTGCTGGAAGTAGCTCCGG+CGG	+	chr8.2:73412484-73412503	MS.gene074462:CDS	65.0%
!	TTCGGTGACGGTTGCGGCAC+CGG	+	chr8.2:73412171-73412190	MS.gene074462:CDS	65.0%
!!	CCATCTCCGGTGTCGTCTCC+GGG	+	chr8.2:73412133-73412152	MS.gene074462:CDS	65.0%
	CCCGGAGACGACACCGGAGA+TGG	-	chr8.2:73412136-73412155	None:intergenic	70.0%
!	GGTGACGGTTGCGGCACCGG+CGG	+	chr8.2:73412174-73412193	MS.gene074462:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	73412064	73413194	73412064	ID=MS.gene074462
chr8.2	mRNA	73412064	73413194	73412064	ID=MS.gene074462.t1;Parent=MS.gene074462
chr8.2	exon	73412064	73413194	73412064	ID=MS.gene074462.t1.exon1;Parent=MS.gene074462.t1
chr8.2	CDS	73412064	73413194	73412064	ID=cds.MS.gene074462.t1;Parent=MS.gene074462.t1

Gene Sequence

>MS.gene074462

ATGGATGACGACGACGAGATCCACTCGGCTAACTCGATCCACTCGAATCCATCTCCGGCGAGTGGTTCTCCATCTCCGGTGTCGTCTCCGGGAGCGATTGGTCGGATTTCGGTGACGGTTGCGGCACCGGCGGCGAACAGCTATGCATTAGCGCTTCCGATTCAGAATACGACACGTGGAAGCAACGGTGGAGGGAGGGAGGATTGTTGGAGCGAAGCAGCGACGGCGGTGTTGATTGAAGCGTGGGGAGAGAGGTATTTGGAATTGAGCAGAGGGAATTTGAAGCAGAAGCATTGGAAAGAGGTTGCGGAGATTGTTAATGGAAGAGGTGATTATTTGAAAGCACCGAAAACTGATATTCAGTGTAAGAATCGGATTGATACGGTTAAGAAGAAGTATAAATCGGAGAAAGCTAAGATCGGTGCTGGAAGTAGCTCCGGCGGTGTTACAACCAGCACTTGGCGGTTTTATGATCGCTTAGATCAGTTAATTGGTCCAGCTGCCAAGGTTAGTGGTGTTTCCGGTACCAGTCATACCGGAAACAGTCATTTGTCACAGCAGAAAGTTCCGTTAGGAATTCCTGTTGGTATTCGCGCCTCTGGAGCTAGAGGCGCGAATCAGGTTAATTCGCAGAAGAAGGATATTCATCAAGCTCAGTTGAATTATCAGAAGATTCAGCTCAGACCACGAGTTTCTGAGCTGAATTCTTCTGATAATTCATCTGAGAAAGAAGCGTTGTCACCGGTGTCAAGCGACAGTTTACCACCACCGGAGAGGAAGAGAGCGAAAGTGATGAATTTGAATTCAAATTCGAAGGGGAGAGGTTGGGGAAGTGCGGTGAGGGAATTGACACAGGCAATTGTGAAATTTGGTGAAGCTTATGAACAAGCGGAGACATCGAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAAACTCAGGTAGAGATTTCACAGTTGAAACTTGGAAGAAAAAGTGTTAATGTTAATGGTAACACAAGTAATCATCAAAACAACAACAATGTAACCAGCAACAACAACAACAATAGCAACCATAACAATAACAGTGACAGTGAGTGA

Protein sequence

>MS.gene074462.t1

MDDDDEIHSANSIHSNPSPASGSPSPVSSPGAIGRISVTVAAPAANSYALALPIQNTTRGSNGGGREDCWSEAATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVNGRGDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIGAGSSSGGVTTSTWRFYDRLDQLIGPAAKVSGVSGTSHTGNSHLSQQKVPLGIPVGIRASGARGANQVNSQKKDIHQAQLNYQKIQLRPRVSELNSSDNSSEKEALSPVSSDSLPPPERKRAKVMNLNSNSKGRGWGSAVRELTQAIVKFGEAYEQAETSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKSVNVNGNTSNHQNNNNVTSNNNNNSNHNNNSDSE