Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08223.t1 | XP_009366438.1 | 44 | 84 | 32 | 3 | 8 | 87 | 37 | 109 | 9.40E-08 | 66.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08223.t1 | A0A251N6G2 | 40.5 | 84 | 29 | 3 | 8 | 87 | 36 | 102 | 6.3e-06 | 59.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene08223 | 0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene08223 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene049257 | MS.gene08223 | 0.856976 | 2.23E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene08223 | 0.82146 | 3.99E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene08223 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene050553 | MS.gene08223 | 0.808705 | 2.72E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene08223 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene08223 | 0.811105 | 8.27E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene08223 | 0.841665 | 4.14E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene08223 | 0.831892 | 1.29E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene08223 | 0.847632 | 1.02E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene08223 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene08223 | 0.862504 | 4.84E-64 | -1.69E-46 |
| MS.gene051552 | MS.gene08223 | -0.830663 | 2.59E-55 | -1.69E-46 |
| MS.gene051588 | MS.gene08223 | 0.809149 | 2.18E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene08223 | 0.855101 | 7.91E-62 | -1.69E-46 |
| MS.gene051941 | MS.gene08223 | 0.825272 | 5.13E-54 | -1.69E-46 |
| MS.gene052134 | MS.gene08223 | 0.808945 | 2.41E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene08223 | 0.847268 | 1.29E-59 | -1.69E-46 |
| MS.gene052414 | MS.gene08223 | 0.835744 | 1.40E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene08223 | 0.80057 | 1.35E-48 | -1.69E-46 |
| MS.gene052501 | MS.gene08223 | 0.842702 | 2.20E-58 | -1.69E-46 |
| MS.gene052503 | MS.gene08223 | 0.834318 | 3.21E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene08223 | 0.838706 | 2.45E-57 | -1.69E-46 |
| MS.gene052823 | MS.gene08223 | 0.829864 | 4.05E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene08223 | 0.833185 | 6.17E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene08223 | 0.824411 | 8.19E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene08223 | 0.850618 | 1.51E-60 | -1.69E-46 |
| MS.gene053169 | MS.gene08223 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene08223 | 0.81571 | 8.04E-52 | -1.69E-46 |
| MS.gene053318 | MS.gene08223 | 0.808287 | 3.33E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene08223 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene08223 | 0.823847 | 1.11E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene08223 | 0.813203 | 2.88E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene08223 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene08223 | 0.841326 | 5.08E-58 | -1.69E-46 |
| MS.gene054107 | MS.gene08223 | 0.809145 | 2.19E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene08223 | 0.829822 | 4.15E-55 | -1.69E-46 |
| MS.gene054884 | MS.gene08223 | -0.802459 | 5.55E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene08223 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene08223 | 0.806159 | 9.42E-50 | -1.69E-46 |
| MS.gene055159 | MS.gene08223 | -0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene08223 | 0.808116 | 3.63E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene08223 | 0.837709 | 4.43E-57 | -1.69E-46 |
| MS.gene05556 | MS.gene08223 | 0.833309 | 5.74E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene08223 | 0.861062 | 1.34E-63 | -1.69E-46 |
| MS.gene055744 | MS.gene08223 | 0.860769 | 1.64E-63 | -1.69E-46 |
| MS.gene05589 | MS.gene08223 | 0.81128 | 7.58E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene08223 | 0.805416 | 1.35E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene08223 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene08223 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene08223 | 0.839654 | 1.39E-57 | -1.69E-46 |
| MS.gene056514 | MS.gene08223 | 0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene08223 | 0.864422 | 1.23E-64 | -1.69E-46 |
| MS.gene057019 | MS.gene08223 | 0.829437 | 5.15E-55 | -1.69E-46 |
| MS.gene057332 | MS.gene08223 | 0.812409 | 4.30E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene08223 | 0.844309 | 8.19E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene08223 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene08223 | 0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene08223 | 0.814631 | 1.40E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene08223 | 0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene08223 | 0.848705 | 5.17E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene08223 | 0.842727 | 2.17E-58 | -1.69E-46 |
| MS.gene058418 | MS.gene08223 | -0.8438 | 1.12E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene08223 | 0.856376 | 3.35E-62 | -1.69E-46 |
| MS.gene058544 | MS.gene08223 | 0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene08223 | 0.873183 | 1.79E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene08223 | 0.855414 | 6.41E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene08223 | 0.837717 | 4.41E-57 | -1.69E-46 |
| MS.gene059303 | MS.gene08223 | 0.851009 | 1.17E-60 | -1.69E-46 |
| MS.gene059512 | MS.gene08223 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene08223 | 0.804329 | 2.28E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene08223 | 0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene08223 | 0.826835 | 2.18E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene08223 | 0.83093 | 2.23E-55 | -1.69E-46 |
| MS.gene060485 | MS.gene08223 | 0.828331 | 9.54E-55 | -1.69E-46 |
| MS.gene06077 | MS.gene08223 | 0.802157 | 6.41E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene08223 | 0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene061231 | MS.gene08223 | 0.805239 | 1.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08223.t1 | MTR_7g085420 | 78.788 | 33 | 7 | 0 | 55 | 87 | 125 | 157 | 9.49e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGCTGAGTTGTTTGCTTA+TGG | 0.225975 | 7.3:+23119118 | MS.gene08223:CDS |
| GTAACTTGTTCTTCTCTTGT+GGG | 0.315212 | 7.3:-23118651 | None:intergenic |
| TCTATATACCAGCTGTCTTA+AGG | 0.324607 | 7.3:+23119621 | MS.gene08223:CDS |
| CTATATACCAGCTGTCTTAA+GGG | 0.359416 | 7.3:+23119622 | MS.gene08223:CDS |
| TGTAACTTGTTCTTCTCTTG+TGG | 0.389234 | 7.3:-23118652 | None:intergenic |
| TCAGCAGAAGTCTTGAATAT+TGG | 0.393951 | 7.3:-23119103 | None:intergenic |
| AGAATGAGTTCATCAAATTC+CGG | 0.430673 | 7.3:-23121679 | None:intergenic |
| GACTGCTATCATCATGCTCC+AGG | 0.462622 | 7.3:+23119145 | MS.gene08223:CDS |
| GGCCAGTCAATGTTGTATGC+TGG | 0.505235 | 7.3:+23119166 | MS.gene08223:CDS |
| TTCCAGCATACAACATTGAC+TGG | 0.512985 | 7.3:-23119168 | None:intergenic |
| GCATACAACATTGACTGGCC+TGG | 0.514751 | 7.3:-23119163 | None:intergenic |
| TGGTATATAGAAAGATCCAC+TGG | 0.525235 | 7.3:-23119609 | None:intergenic |
| AGAAACTGTGTCATCTCTCA+TGG | 0.541184 | 7.3:+23118622 | MS.gene08223:CDS |
| GGACATACCCTTAAGACAGC+TGG | 0.563393 | 7.3:-23119629 | None:intergenic |
| TCAATGAGTGAGAACAATAG+TGG | 0.581404 | 7.3:-23121703 | None:intergenic |
| AAGAGAAGAACAAGTTACAA+AGG | 0.622533 | 7.3:+23118656 | MS.gene08223:CDS |
| GGTATATAGAAAGATCCACT+GGG | 0.672250 | 7.3:-23119608 | None:intergenic |
| TATATAGAAAGATCCACTGG+GGG | 0.730035 | 7.3:-23119606 | None:intergenic |
| GTATATAGAAAGATCCACTG+GGG | 0.764928 | 7.3:-23119607 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAATGTATAAGAACA+GGG | - | chr7.3:23121538-23121557 | None:intergenic | 15.0% |
| !! | TAATATAAATGTATAAGAAC+AGG | - | chr7.3:23121539-23121558 | None:intergenic | 15.0% |
| !! | TTTATGAAATTATATAAGCT+TGG | - | chr7.3:23118979-23118998 | None:intergenic | 15.0% |
| !!! | AAACATGTATACTATTTTAT+TGG | + | chr7.3:23119987-23120006 | MS.gene08223:intron | 15.0% |
| !!! | TGTATTTTGTTGTTATAAAA+TGG | + | chr7.3:23119746-23119765 | MS.gene08223:intron | 15.0% |
| !!! | TTTTTTGTAATTATAGTATC+CGG | + | chr7.3:23121660-23121679 | MS.gene08223:intron | 15.0% |
| !! | ACAGTTATTAAACCATTAAA+TGG | + | chr7.3:23120883-23120902 | MS.gene08223:intron | 20.0% |
| !!! | AAACAAAATTGATAATGAGT+TGG | + | chr7.3:23119004-23119023 | MS.gene08223:intron | 20.0% |
| !!! | ATTTCAGATTTTGTTTATAC+AGG | + | chr7.3:23119547-23119566 | MS.gene08223:intron | 20.0% |
| ! | ACTTCGATTTCAAATATATC+TGG | + | chr7.3:23121479-23121498 | MS.gene08223:intron | 25.0% |
| ! | ATAACAACATAGTTCATTCA+TGG | - | chr7.3:23120752-23120771 | None:intergenic | 25.0% |
| ! | ATGTATAGTTTAAAAAACCG+TGG | + | chr7.3:23119304-23119323 | MS.gene08223:intron | 25.0% |
| ! | GTTATTAAACCATTAAATGG+TGG | + | chr7.3:23120886-23120905 | MS.gene08223:intron | 25.0% |
| ! | GTTTAATAACTGTCATTCTT+GGG | - | chr7.3:23120876-23120895 | None:intergenic | 25.0% |
| ! | TGATATCTAAAAACAAGTTC+CGG | - | chr7.3:23120838-23120857 | None:intergenic | 25.0% |
| ! | TTACTTTAGTAGGTTTACAT+CGG | - | chr7.3:23120423-23120442 | None:intergenic | 25.0% |
| ! | TTAGTAAATCCACCATTTAA+TGG | - | chr7.3:23120898-23120917 | None:intergenic | 25.0% |
| ! | TTATATTAGATTCGATGAGA+CGG | + | chr7.3:23121551-23121570 | MS.gene08223:intron | 25.0% |
| !! | ACTAGGAACCATTTTATATA+CGG | - | chr7.3:23119803-23119822 | None:intergenic | 25.0% |
| !! | ACTATATTATGTGCTATTGA+TGG | + | chr7.3:23120708-23120727 | MS.gene08223:intron | 25.0% |
| !! | AGCTCAACATATACTTATTT+TGG | + | chr7.3:23121337-23121356 | MS.gene08223:intron | 25.0% |
| !! | CATGTATACTATTTTATTGG+TGG | + | chr7.3:23119990-23120009 | MS.gene08223:intron | 25.0% |
| !! | GCTTTTAAACTTCTACATAT+GGG | - | chr7.3:23120509-23120528 | None:intergenic | 25.0% |
| !! | TATACTATTTTATTGGTGGA+AGG | + | chr7.3:23119994-23120013 | MS.gene08223:intron | 25.0% |
| !! | TGCTTTTAAACTTCTACATA+TGG | - | chr7.3:23120510-23120529 | None:intergenic | 25.0% |
| !!! | TTGTTATTTAAACTGCTACA+CGG | - | chr7.3:23120648-23120667 | None:intergenic | 25.0% |
| AAGAAGATATCAGTGAAAAG+AGG | + | chr7.3:23121107-23121126 | MS.gene08223:intron | 30.0% | |
| AAGAGAAGAACAAGTTACAA+AGG | + | chr7.3:23118656-23118675 | MS.gene08223:CDS | 30.0% | |
| AATCCATAAATCTATCTAGC+TGG | - | chr7.3:23120365-23120384 | None:intergenic | 30.0% | |
| ACTTGTAAACAGTAGTTAGA+GGG | - | chr7.3:23121235-23121254 | None:intergenic | 30.0% | |
| AGAATGAGTTCATCAAATTC+CGG | - | chr7.3:23121682-23121701 | None:intergenic | 30.0% | |
| AGCACATAATATAGTTTACG+TGG | - | chr7.3:23120703-23120722 | None:intergenic | 30.0% | |
| ATACCAGTGATTATGAACTA+AGG | + | chr7.3:23120460-23120479 | MS.gene08223:intron | 30.0% | |
| ATGTCTACTTATAGAAAAGG+GGG | + | chr7.3:23120541-23120560 | MS.gene08223:intron | 30.0% | |
| ATGTTAGATTGTTAGTTCCT+AGG | + | chr7.3:23120085-23120104 | MS.gene08223:intron | 30.0% | |
| ATTCTCTTTCACTTGTAACT+AGG | - | chr7.3:23119774-23119793 | None:intergenic | 30.0% | |
| CATGTCTACTTATAGAAAAG+GGG | + | chr7.3:23120540-23120559 | MS.gene08223:intron | 30.0% | |
| CCATGTCTACTTATAGAAAA+GGG | + | chr7.3:23120539-23120558 | MS.gene08223:intron | 30.0% | |
| CCTACTAAAGTAATCAACTA+CGG | + | chr7.3:23120430-23120449 | MS.gene08223:intron | 30.0% | |
| CTCCATAAACTCTAAACAAA+TGG | - | chr7.3:23119199-23119218 | None:intergenic | 30.0% | |
| GGAAGTTGTATTATCAATCT+TGG | + | chr7.3:23120609-23120628 | MS.gene08223:intron | 30.0% | |
| GGTTTAATAACTGTCATTCT+TGG | - | chr7.3:23120877-23120896 | None:intergenic | 30.0% | |
| GTCAGGTATTATATACCTTA+GGG | - | chr7.3:23121191-23121210 | None:intergenic | 30.0% | |
| GTTAGAAGTTAGTTCATTTC+TGG | - | chr7.3:23121213-23121232 | None:intergenic | 30.0% | |
| GTTGTTTGTCTGCTTTAATA+CGG | + | chr7.3:23121311-23121330 | MS.gene08223:intron | 30.0% | |
| TACCAGTGATTATGAACTAA+GGG | + | chr7.3:23120461-23120480 | MS.gene08223:intron | 30.0% | |
| TCATTCTTGGGCAAAATATA+TGG | - | chr7.3:23120864-23120883 | None:intergenic | 30.0% | |
| TCCATGTCTACTTATAGAAA+AGG | + | chr7.3:23120538-23120557 | MS.gene08223:intron | 30.0% | |
| TCTGTTAGAAAGATAAGAAG+TGG | - | chr7.3:23120324-23120343 | None:intergenic | 30.0% | |
| TGAATATGATTCTGTTGATG+AGG | + | chr7.3:23118802-23118821 | MS.gene08223:intron | 30.0% | |
| TTGTGTTGGATATATCTTAC+AGG | + | chr7.3:23118882-23118901 | MS.gene08223:intron | 30.0% | |
| ! | GAACTATCATGATTGTTTCT+TGG | + | chr7.3:23121021-23121040 | MS.gene08223:intron | 30.0% |
| ! | TGCCATTTGTTTAGAGTTTA+TGG | + | chr7.3:23119194-23119213 | MS.gene08223:intron | 30.0% |
| ! | TGTTATTTAAACTGCTACAC+GGG | - | chr7.3:23120647-23120666 | None:intergenic | 30.0% |
| ! | TTGTTTAGAGTTTATGGAGA+AGG | + | chr7.3:23119200-23119219 | MS.gene08223:intron | 30.0% |
| !! | AAACTGTTGTTTCAGTAACT+AGG | - | chr7.3:23119820-23119839 | None:intergenic | 30.0% |
| !! | AACCAAAAGTATTACTTCAG+AGG | - | chr7.3:23119657-23119676 | None:intergenic | 30.0% |
| !! | ACCAAAAGTATTACTTCAGA+GGG | - | chr7.3:23119656-23119675 | None:intergenic | 30.0% |
| !! | CTTCAACATTCTAAAATCAC+TGG | + | chr7.3:23119697-23119716 | MS.gene08223:intron | 30.0% |
| !!! | ACATATACTTATTTTGGTGC+AGG | + | chr7.3:23121343-23121362 | MS.gene08223:intron | 30.0% |
| AACTTCTACATATGGGTCTT+TGG | - | chr7.3:23120502-23120521 | None:intergenic | 35.0% | |
| AGAAAGATAAGAAGTGGTCA+TGG | - | chr7.3:23120318-23120337 | None:intergenic | 35.0% | |
| AGACTCGTCAACAAAATGTT+AGG | - | chr7.3:23120230-23120249 | None:intergenic | 35.0% | |
| ATGACTCGCCGTATATAAAA+TGG | + | chr7.3:23119792-23119811 | MS.gene08223:intron | 35.0% | |
| ATTGACCTTCTCATTCTTAC+TGG | + | chr7.3:23121140-23121159 | MS.gene08223:intron | 35.0% | |
| CAACCAGCTAGATAGATTTA+TGG | + | chr7.3:23120359-23120378 | MS.gene08223:intron | 35.0% | |
| CACTTGTAAACAGTAGTTAG+AGG | - | chr7.3:23121236-23121255 | None:intergenic | 35.0% | |
| CCGTAGTTGATTACTTTAGT+AGG | - | chr7.3:23120433-23120452 | None:intergenic | 35.0% | |
| CCTCTTTCAAAGCTTTCAAA+GGG | - | chr7.3:23120278-23120297 | None:intergenic | 35.0% | |
| CTATATACCAGCTGTCTTAA+GGG | + | chr7.3:23119622-23119641 | MS.gene08223:CDS | 35.0% | |
| CTCAGCTTAATGAAACTAAC+AGG | - | chr7.3:23119403-23119422 | None:intergenic | 35.0% | |
| CTCTAACTACTGTTTACAAG+TGG | + | chr7.3:23121234-23121253 | MS.gene08223:intron | 35.0% | |
| CTCTTTCAAAGCTTTCAAAG+GGG | - | chr7.3:23120277-23120296 | None:intergenic | 35.0% | |
| CTTTCGTAGTTATGAAAGCT+GGG | + | chr7.3:23120774-23120793 | MS.gene08223:intron | 35.0% | |
| GCATATACACAGTTGTTAGA+GGG | - | chr7.3:23119911-23119930 | None:intergenic | 35.0% | |
| GGTATATAGAAAGATCCACT+GGG | - | chr7.3:23119611-23119630 | None:intergenic | 35.0% | |
| GGTCAGGTATTATATACCTT+AGG | - | chr7.3:23121192-23121211 | None:intergenic | 35.0% | |
| GTATATAGAAAGATCCACTG+GGG | - | chr7.3:23119610-23119629 | None:intergenic | 35.0% | |
| GTCAACAAAATGTTAGGTGA+GGG | - | chr7.3:23120224-23120243 | None:intergenic | 35.0% | |
| GTCTATCCATAGAAAAACTC+TGG | - | chr7.3:23120042-23120061 | None:intergenic | 35.0% | |
| GTTTAGTAAACATGACCAAG+AGG | - | chr7.3:23120193-23120212 | None:intergenic | 35.0% | |
| GTTTCTTGGCATTATGAGAA+TGG | + | chr7.3:23121035-23121054 | MS.gene08223:intron | 35.0% | |
| TAAAAACAAGTTCCGGTTCA+TGG | - | chr7.3:23120831-23120850 | None:intergenic | 35.0% | |
| TAGTCAAGAACAGTCTTAGT+CGG | + | chr7.3:23121402-23121421 | MS.gene08223:intron | 35.0% | |
| TATATAGAAAGATCCACTGG+GGG | - | chr7.3:23119609-23119628 | None:intergenic | 35.0% | |
| TCAACAAAATGTTAGGTGAG+GGG | - | chr7.3:23120223-23120242 | None:intergenic | 35.0% | |
| TCAATGAGTGAGAACAATAG+TGG | - | chr7.3:23121706-23121725 | None:intergenic | 35.0% | |
| TCAGCAGAAGTCTTGAATAT+TGG | - | chr7.3:23119106-23119125 | None:intergenic | 35.0% | |
| TCTATATACCAGCTGTCTTA+AGG | + | chr7.3:23119621-23119640 | MS.gene08223:CDS | 35.0% | |
| TCTCCAGGATGAACATAATA+CGG | + | chr7.3:23120934-23120953 | MS.gene08223:intron | 35.0% | |
| TGAACTAAGGGCAGTAAAAA+TGG | + | chr7.3:23120473-23120492 | MS.gene08223:intron | 35.0% | |
| TGCATATACACAGTTGTTAG+AGG | - | chr7.3:23119912-23119931 | None:intergenic | 35.0% | |
| TGGTATATAGAAAGATCCAC+TGG | - | chr7.3:23119612-23119631 | None:intergenic | 35.0% | |
| TGTGTATATGCAGAACTATC+TGG | + | chr7.3:23119920-23119939 | MS.gene08223:intron | 35.0% | |
| TTCTGCTTTGCTAACTAAGA+TGG | - | chr7.3:23121089-23121108 | None:intergenic | 35.0% | |
| TTGCACACATATATACCCTA+AGG | + | chr7.3:23121173-23121192 | MS.gene08223:intron | 35.0% | |
| TTTATTGGTGGAAGGTAGAA+GGG | + | chr7.3:23120002-23120021 | MS.gene08223:intron | 35.0% | |
| ! | ATATTAGAGCACTTACTGAC+AGG | - | chr7.3:23121456-23121475 | None:intergenic | 35.0% |
| ! | CCCTTTTCTATAAGTAGACA+TGG | - | chr7.3:23120542-23120561 | None:intergenic | 35.0% |
| ! | GATGATGATGATGTATTCGA+TGG | + | chr7.3:23118833-23118852 | MS.gene08223:intron | 35.0% |
| ! | TTTTATTGGTGGAAGGTAGA+AGG | + | chr7.3:23120001-23120020 | MS.gene08223:intron | 35.0% |
| !! | AAAAGTATTACTTCAGAGGG+TGG | - | chr7.3:23119653-23119672 | None:intergenic | 35.0% |
| !! | AAGTTAGTTCATTTCTGGTC+AGG | - | chr7.3:23121208-23121227 | None:intergenic | 35.0% |
| !! | CCTTTGAAAGCTTTGAAAGA+GGG | + | chr7.3:23120276-23120295 | MS.gene08223:intron | 35.0% |
| !! | GTAACTTGTTCTTCTCTTGT+GGG | - | chr7.3:23118654-23118673 | None:intergenic | 35.0% |
| !! | TGTAACTTGTTCTTCTCTTG+TGG | - | chr7.3:23118655-23118674 | None:intergenic | 35.0% |
| !!! | ACCCTCTGAAGTAATACTTT+TGG | + | chr7.3:23119652-23119671 | MS.gene08223:intron | 35.0% |
| AACATGACCAAGAGGTAGTA+AGG | - | chr7.3:23120185-23120204 | None:intergenic | 40.0% | |
| AGAAACTGTGTCATCTCTCA+TGG | + | chr7.3:23118622-23118641 | MS.gene08223:CDS | 40.0% | |
| AGGTAGTAAGGTTCAAACCT+AGG | - | chr7.3:23120173-23120192 | None:intergenic | 40.0% | |
| AGGTTCAAACCTAGGAACTA+AGG | - | chr7.3:23120097-23120116 | None:intergenic | 40.0% | |
| AGTACTAACCAAGAGGTCTA+AGG | - | chr7.3:23120117-23120136 | None:intergenic | 40.0% | |
| AGTACTTTCCATCCATGAAC+CGG | + | chr7.3:23120816-23120835 | MS.gene08223:intron | 40.0% | |
| ATACACAGTTGTTAGAGGGT+TGG | - | chr7.3:23119907-23119926 | None:intergenic | 40.0% | |
| ATATACCTGACAGTACTGCA+GGG | + | chr7.3:23119851-23119870 | MS.gene08223:intron | 40.0% | |
| ATCCCGTATTATGTTCATCC+TGG | - | chr7.3:23120940-23120959 | None:intergenic | 40.0% | |
| ATCTGGTAATAACCCTTGCA+TGG | + | chr7.3:23119937-23119956 | MS.gene08223:intron | 40.0% | |
| CAAACCAGCTAGATAGTAGA+AGG | - | chr7.3:23120140-23120159 | None:intergenic | 40.0% | |
| CCAGCTTTCATAACTACGAA+AGG | - | chr7.3:23120776-23120795 | None:intergenic | 40.0% | |
| CCCTCTTTCAAAGCTTTCAA+AGG | - | chr7.3:23120279-23120298 | None:intergenic | 40.0% | |
| CCTTTCGTAGTTATGAAAGC+TGG | + | chr7.3:23120773-23120792 | MS.gene08223:intron | 40.0% | |
| CGTCAACAAAATGTTAGGTG+AGG | - | chr7.3:23120225-23120244 | None:intergenic | 40.0% | |
| CTACTTATAGAAAAGGGGGT+TGG | + | chr7.3:23120545-23120564 | MS.gene08223:intron | 40.0% | |
| CTCCAGGATGAACATAATAC+GGG | + | chr7.3:23120935-23120954 | MS.gene08223:intron | 40.0% | |
| CTGTTCCAGTAAGAATGAGA+AGG | - | chr7.3:23121148-23121167 | None:intergenic | 40.0% | |
| CTTCATACCTCAGAAGCAAA+GGG | + | chr7.3:23118717-23118736 | MS.gene08223:intron | 40.0% | |
| CTTTAGTAGGTTTACATCGG+TGG | - | chr7.3:23120420-23120439 | None:intergenic | 40.0% | |
| GATGATGTATTCGATGGTGA+TGG | + | chr7.3:23118839-23118858 | MS.gene08223:intron | 40.0% | |
| GTTTGAACCTTACTACCTCT+TGG | + | chr7.3:23120175-23120194 | MS.gene08223:intron | 40.0% | |
| TACTCCTTCTACTATCTAGC+TGG | + | chr7.3:23120133-23120152 | MS.gene08223:intron | 40.0% | |
| TATATACCTGACAGTACTGC+AGG | + | chr7.3:23119850-23119869 | MS.gene08223:intron | 40.0% | |
| TCATCATGAACACCTTCACT+GGG | - | chr7.3:23118767-23118786 | None:intergenic | 40.0% | |
| TCTCATTCTTACTGGAACAG+TGG | + | chr7.3:23121148-23121167 | MS.gene08223:intron | 40.0% | |
| TCTCTTAGCTAGTATCACCA+CGG | - | chr7.3:23119324-23119343 | None:intergenic | 40.0% | |
| TCTGCTGAGTTGTTTGCTTA+TGG | + | chr7.3:23119118-23119137 | MS.gene08223:CDS | 40.0% | |
| TCTTCATACCTCAGAAGCAA+AGG | + | chr7.3:23118716-23118735 | MS.gene08223:intron | 40.0% | |
| TGAGGTATGAAGAAGATGCA+TGG | - | chr7.3:23118709-23118728 | None:intergenic | 40.0% | |
| TGCCCTTAGTTCATAATCAC+TGG | - | chr7.3:23120466-23120485 | None:intergenic | 40.0% | |
| TGGTTTGAACCTTAGTTCCT+AGG | + | chr7.3:23120153-23120172 | MS.gene08223:intron | 40.0% | |
| TTAAGCTGAGCTTATTTCCC+AGG | + | chr7.3:23119413-23119432 | MS.gene08223:intron | 40.0% | |
| TTATTGGTGGAAGGTAGAAG+GGG | + | chr7.3:23120003-23120022 | MS.gene08223:intron | 40.0% | |
| TTCAAAGGGGTCTACCATTA+AGG | - | chr7.3:23120264-23120283 | None:intergenic | 40.0% | |
| TTCATCATGAACACCTTCAC+TGG | - | chr7.3:23118768-23118787 | None:intergenic | 40.0% | |
| TTCCAGCATACAACATTGAC+TGG | - | chr7.3:23119171-23119190 | None:intergenic | 40.0% | |
| ! | GGTTGGATTCTCTTTTGTGA+AGG | + | chr7.3:23120562-23120581 | MS.gene08223:intron | 40.0% |
| !! | CCCTTTGAAAGCTTTGAAAG+AGG | + | chr7.3:23120275-23120294 | MS.gene08223:intron | 40.0% |
| !! | GGGATCTCTGTATTTTGAGA+GGG | + | chr7.3:23120955-23120974 | MS.gene08223:intron | 40.0% |
| !! | TAGAAGGAGTACTAACCAAG+AGG | - | chr7.3:23120124-23120143 | None:intergenic | 40.0% |
| !! | TGAGAGTACTAGATTGCAAG+AGG | + | chr7.3:23120588-23120607 | MS.gene08223:intron | 40.0% |
| AAAGAGGGCAAAGCACACAA+TGG | + | chr7.3:23120291-23120310 | MS.gene08223:intron | 45.0% | |
| AACAAGTTCCGGTTCATGGA+TGG | - | chr7.3:23120827-23120846 | None:intergenic | 45.0% | |
| AACACTTCCCTTTGCTTCTG+AGG | - | chr7.3:23118727-23118746 | None:intergenic | 45.0% | |
| CAGGGCTATGTTTAGTTGAG+TGG | - | chr7.3:23121520-23121539 | None:intergenic | 45.0% | |
| CTACCATTAAGGTAGCTGTG+TGG | - | chr7.3:23120253-23120272 | None:intergenic | 45.0% | |
| GGTTTGAACCTTAGACCTCT+TGG | + | chr7.3:23120106-23120125 | MS.gene08223:intron | 45.0% | |
| GTTTACAAGTGGCACGATGT+GGG | + | chr7.3:23121245-23121264 | MS.gene08223:intron | 45.0% | |
| TCTCCACACAGCTACCTTAA+TGG | + | chr7.3:23120247-23120266 | MS.gene08223:intron | 45.0% | |
| TGAAAGCTGGGATCAAAGCA+AGG | + | chr7.3:23120786-23120805 | MS.gene08223:intron | 45.0% | |
| TGAGAGGGATCAAACAAAGC+TGG | + | chr7.3:23120970-23120989 | MS.gene08223:intron | 45.0% | |
| TGGTAATAACCCTTGCATGG+TGG | + | chr7.3:23119940-23119959 | MS.gene08223:intron | 45.0% | |
| TGTTTACAAGTGGCACGATG+TGG | + | chr7.3:23121244-23121263 | MS.gene08223:intron | 45.0% | |
| ! | ACGAGGCCAGAGTTTTTCTA+TGG | + | chr7.3:23120033-23120052 | MS.gene08223:intron | 45.0% |
| ! | GAGGTCTAAGGTTCAAACCT+AGG | - | chr7.3:23120105-23120124 | None:intergenic | 45.0% |
| ! | TGATGGCTTGTCTGGTTTCA+GGG | + | chr7.3:23118856-23118875 | MS.gene08223:intron | 45.0% |
| !! | AGGGAAGTGTTGTAATGCTG+AGG | + | chr7.3:23118736-23118755 | MS.gene08223:intron | 45.0% |
| !! | CGGGATCTCTGTATTTTGAG+AGG | + | chr7.3:23120954-23120973 | MS.gene08223:intron | 45.0% |
| !! | CTCACTTTTCCACCATGCAA+GGG | - | chr7.3:23119952-23119971 | None:intergenic | 45.0% |
| AAGCTGGGATCAAAGCAAGG+TGG | + | chr7.3:23120789-23120808 | MS.gene08223:intron | 50.0% | |
| ACAACCACTAGACTCTCTCC+AGG | + | chr7.3:23120919-23120938 | MS.gene08223:intron | 50.0% | |
| GACTGCTATCATCATGCTCC+AGG | + | chr7.3:23119145-23119164 | MS.gene08223:CDS | 50.0% | |
| GGACATACCCTTAAGACAGC+TGG | - | chr7.3:23119632-23119651 | None:intergenic | 50.0% | |
| GGCCAGTCAATGTTGTATGC+TGG | + | chr7.3:23119166-23119185 | MS.gene08223:CDS | 50.0% | |
| TCATCCTGGAGAGAGTCTAG+TGG | - | chr7.3:23120926-23120945 | None:intergenic | 50.0% | |
| ! | ACATCGGTGGTAGTGCTCAA+AGG | - | chr7.3:23120407-23120426 | None:intergenic | 50.0% |
| ! | CATCGGTGGTAGTGCTCAAA+GGG | - | chr7.3:23120406-23120425 | None:intergenic | 50.0% |
| ! | CCTTGCATGGTGGAAAAGTG+AGG | + | chr7.3:23119950-23119969 | MS.gene08223:intron | 50.0% |
| ! | GATGGCTTGTCTGGTTTCAG+GGG | + | chr7.3:23118857-23118876 | MS.gene08223:intron | 50.0% |
| ! | GCATACAACATTGACTGGCC+TGG | - | chr7.3:23119166-23119185 | None:intergenic | 50.0% |
| ! | GTGATGGCTTGTCTGGTTTC+AGG | + | chr7.3:23118855-23118874 | MS.gene08223:intron | 50.0% |
| ! | TGGTTTCAGGGGTCTTGTGT+TGG | + | chr7.3:23118868-23118887 | MS.gene08223:intron | 50.0% |
| !! | CCTCACTTTTCCACCATGCA+AGG | - | chr7.3:23119953-23119972 | None:intergenic | 50.0% |
| !! | TTCGATGGTGATGGCTTGTC+TGG | + | chr7.3:23118848-23118867 | MS.gene08223:intron | 50.0% |
| AAGACTGTGAACTCCCCCAG+TGG | + | chr7.3:23119593-23119612 | MS.gene08223:CDS | 55.0% | |
| GACTTCCCTGCAGTACTGTC+AGG | - | chr7.3:23119859-23119878 | None:intergenic | 55.0% | |
| GTAGAAGGGGTAGCTTCACG+AGG | + | chr7.3:23120016-23120035 | MS.gene08223:intron | 55.0% | |
| CGCACTGAGCATAGAGGCCT+GGG | - | chr7.3:23119433-23119452 | None:intergenic | 60.0% | |
| TGCACGCGCACTGAGCATAG+AGG | - | chr7.3:23119439-23119458 | None:intergenic | 60.0% | |
| GCGCACTGAGCATAGAGGCC+TGG | - | chr7.3:23119434-23119453 | None:intergenic | 65.0% | |
| GCTGAGGCACGTCCCAGTGA+AGG | + | chr7.3:23118752-23118771 | MS.gene08223:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 23118618 | 23121735 | 23118618 | ID=MS.gene08223 |
| chr7.3 | mRNA | 23118618 | 23121735 | 23118618 | ID=MS.gene08223.t1;Parent=MS.gene08223 |
| chr7.3 | exon | 23118618 | 23118677 | 23118618 | ID=MS.gene08223.t1.exon1;Parent=MS.gene08223.t1 |
| chr7.3 | CDS | 23118618 | 23118677 | 23118618 | ID=cds.MS.gene08223.t1;Parent=MS.gene08223.t1 |
| chr7.3 | exon | 23119100 | 23119201 | 23119100 | ID=MS.gene08223.t1.exon2;Parent=MS.gene08223.t1 |
| chr7.3 | CDS | 23119100 | 23119201 | 23119100 | ID=cds.MS.gene08223.t1;Parent=MS.gene08223.t1 |
| chr7.3 | exon | 23119569 | 23119643 | 23119569 | ID=MS.gene08223.t1.exon3;Parent=MS.gene08223.t1 |
| chr7.3 | CDS | 23119569 | 23119643 | 23119569 | ID=cds.MS.gene08223.t1;Parent=MS.gene08223.t1 |
| chr7.3 | exon | 23121676 | 23121735 | 23121676 | ID=MS.gene08223.t1.exon4;Parent=MS.gene08223.t1 |
| chr7.3 | CDS | 23121676 | 23121735 | 23121676 | ID=cds.MS.gene08223.t1;Parent=MS.gene08223.t1 |
| Gene Sequence |
| Protein sequence |
