AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08836

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08836.t1 MTR_8g083310 90.488 1167 99 4 1 1157 1 1165 0.0 2091
MS.gene08836.t1 MTR_8g081060 58.462 65 7 1 361 425 227 271 5.73e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08836.t1 AT3G23740 33.819 343 180 9 842 1158 240 561 1.19e-37 150

Find 250 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGAAATTTCTGAATT+AGG 0.116328 4.2:+13502658 MS.gene08836:CDS
TTATTTCTCTTATGGGCTTT+GGG 0.192646 4.2:-13503978 None:intergenic
TCTTGGAAAGATGGCAATTT+TGG 0.194696 4.2:-13504756 None:intergenic
AGTGCTTTCTTGAGTGTTTC+TGG 0.194856 4.2:-13503940 None:intergenic
GATCGGGAAGTAGCTGAATT+AGG 0.204752 4.2:+13502589 MS.gene08836:CDS
TGAGTGGATTATTTCTCTTA+TGG 0.204932 4.2:-13503986 None:intergenic
TTGGGAAGATTCTTAAAATA+TGG 0.218302 4.2:-13504380 None:intergenic
TACATTACCATAGTCATCTT+TGG 0.224958 4.2:-13504399 None:intergenic
ATTATTTCTCTTATGGGCTT+TGG 0.233144 4.2:-13503979 None:intergenic
CGACAACATCCAGGTGTTTC+AGG 0.234770 4.2:-13506183 None:intergenic
ATCCAAAAGCTTCTGAAGTT+TGG 0.240513 4.2:-13505821 None:intergenic
CTTCTGAATGGCCTAGTTAA+TGG 0.242037 4.2:+13505323 MS.gene08836:CDS
CAGCTGAAATTTCTGAATTA+GGG 0.242152 4.2:+13502659 MS.gene08836:CDS
GTTACATCGTTTCCACAAAA+AGG 0.243243 4.2:-13502364 None:intergenic
CCCCAAACTTCAGAAGCTTT+TGG 0.244143 4.2:+13505819 MS.gene08836:CDS
TCTTCAGCATCTAACATATT+AGG 0.253871 4.2:-13505137 None:intergenic
ATCAGCTTCCCGTGCAAATA+TGG 0.256177 4.2:-13504320 None:intergenic
TGTCAACGACACTCCTCTTT+TGG 0.257812 4.2:+13506461 MS.gene08836:CDS
CAACTATCAATCTTAGTTTC+AGG 0.258328 4.2:-13503531 None:intergenic
TGCAAGTTTGAATCTGAAAT+TGG 0.260828 4.2:-13505859 None:intergenic
GCTCCGTCGGTTCTGGAAAA+TGG 0.277936 4.2:+13502619 MS.gene08836:CDS
GAGTGGATTATTTCTCTTAT+GGG 0.278982 4.2:-13503985 None:intergenic
AAATCTCTATGAACAGAAAT+TGG 0.285206 4.2:-13506072 None:intergenic
GATTTACCAGTCACACCTTT+AGG 0.298769 4.2:+13506090 MS.gene08836:CDS
TCCAAAAGCTTCTGAAGTTT+GGG 0.301497 4.2:-13505820 None:intergenic
TGATTTAGACTCTGAGCTTC+AGG 0.305858 4.2:-13505107 None:intergenic
CGTTCCGTTTGCGGGAATTT+CGG 0.308084 4.2:-13502171 None:intergenic
CAAGCTGTCAGATGAAGATT+TGG 0.331421 4.2:+13502789 MS.gene08836:CDS
TTATCTTGTAGTTGAGATCT+TGG 0.337870 4.2:-13506000 None:intergenic
AGATCGGACGTTCCGTTTGC+GGG 0.338738 4.2:-13502179 None:intergenic
TTGATCTGTGACTTTCATTT+CGG 0.339926 4.2:-13506214 None:intergenic
CAAAGCCCTCTGCATCCTCT+TGG 0.342184 4.2:-13506285 None:intergenic
GTCAAATTGTATTGGCAATT+CGG 0.344690 4.2:-13504784 None:intergenic
CAATCATTTGAATCACTTCC+AGG 0.354354 4.2:-13505889 None:intergenic
GAAATTTCTGAATTAGGGTT+TGG 0.356119 4.2:+13502664 MS.gene08836:CDS
GGTGATAGTACAGGAAATTC+TGG 0.363890 4.2:+13505922 MS.gene08836:CDS
AAAAGGAAGCAATAACAAAA+AGG 0.364259 4.2:+13505361 MS.gene08836:CDS
CGAATTTATTCCCCACTTGC+CGG 0.365212 4.2:+13502553 MS.gene08836:CDS
TCTGAGGTATGCTCTGCATT+TGG 0.369214 4.2:-13503896 None:intergenic
TCATGACAATGACCCAATTT+CGG 0.374046 4.2:-13503438 None:intergenic
TCATGAAGACAAGAAGGTTA+TGG 0.374927 4.2:+13503455 MS.gene08836:CDS
ATTCAATTACAAAAGGCTAA+TGG 0.376627 4.2:+13503155 MS.gene08836:CDS
TTTGCTGCGGGAACTTGAAC+CGG 0.379639 4.2:-13502269 None:intergenic
CAAGAAGGTTATGGGAGGTC+AGG 0.382245 4.2:+13503464 MS.gene08836:CDS
ATCGGGAAGTAGCTGAATTA+GGG 0.382557 4.2:+13502590 MS.gene08836:CDS
TCTTGAAACGGAACTTGAAC+CGG 0.382730 4.2:-13502313 None:intergenic
TTCCGAATCTGAAAGTCCTT+TGG 0.386134 4.2:-13502386 None:intergenic
AAGAAAGCAGTTTGTGAGTC+TGG 0.393914 4.2:+13505055 MS.gene08836:CDS
TTCAGATCGTGTTGAGGAAA+AGG 0.395076 4.2:+13507394 MS.gene08836:CDS
ACTTGAACCGGAACTGAGTA+TGG 0.396740 4.2:-13502301 None:intergenic
CAAAGTTGACTTGAATACTT+TGG 0.397446 4.2:+13504683 MS.gene08836:CDS
TTCAGGTGATTTCTCCCTGT+TGG 0.398168 4.2:-13506166 None:intergenic
TATCTTGTAGTTGAGATCTT+GGG 0.399426 4.2:-13505999 None:intergenic
ACATTACCATAGTCATCTTT+GGG 0.400117 4.2:-13504398 None:intergenic
AGCTCAGAGTCTAAATCAAT+TGG 0.402575 4.2:+13505112 MS.gene08836:CDS
CAAAACACCAAGCTGCTCTA+AGG 0.402756 4.2:-13503808 None:intergenic
CATGAAGACAAGAAGGTTAT+GGG 0.402943 4.2:+13503456 MS.gene08836:CDS
GTACACCTGCCTTGTCCAAC+AGG 0.404686 4.2:+13506151 MS.gene08836:CDS
ATACTTCCTTCATAAGGTCT+TGG 0.405275 4.2:-13506398 None:intergenic
TTTATAGGAATACCGAAATT+GGG 0.406959 4.2:+13503426 MS.gene08836:intron
TACAGGTACATCTGGTGATC+AGG 0.410151 4.2:+13504542 MS.gene08836:intron
CCTACATAGATGACATCATT+AGG 0.410798 4.2:-13502838 None:intergenic
AAAGCCCTCTGCATCCTCTT+GGG 0.411441 4.2:-13506284 None:intergenic
CGAAGATGACGATCTTGTTA+AGG 0.411660 4.2:+13502459 MS.gene08836:CDS
TTAAGCAAGATTCTTTCAAC+AGG 0.411745 4.2:+13503742 MS.gene08836:CDS
AAAGGAGTTCTCGAGATAGT+AGG 0.415123 4.2:-13506043 None:intergenic
CAAAAGGCTAATGGATGCTA+TGG 0.417412 4.2:+13503164 MS.gene08836:CDS
CTCCTATAGTTGACTGAACC+AGG 0.418077 4.2:-13504350 None:intergenic
TGTTTCAGATGCTTTCCTGC+AGG 0.422230 4.2:-13507205 None:intergenic
TACTTCCTTCATAAGGTCTT+GGG 0.428201 4.2:-13506397 None:intergenic
GATGCTATGGGAGATAATTT+CGG 0.429372 4.2:+13503177 MS.gene08836:CDS
ACAATTTGACGCAAAAGAAA+TGG 0.430175 4.2:+13504797 MS.gene08836:CDS
AATCTTCCCAAAGATGACTA+TGG 0.436351 4.2:+13504392 MS.gene08836:CDS
CCACCATGTGTTGCAGTGTC+TGG 0.438116 4.2:-13505284 None:intergenic
GTGTTTCTGGTCAGATCCAT+AGG 0.442538 4.2:-13503927 None:intergenic
TGTTAAGATCATCATTCATC+TGG 0.443214 4.2:-13507254 None:intergenic
ATTTCAGTATCACGAGTCAT+TGG 0.444093 4.2:-13503846 None:intergenic
TTCAAATGATTGTGATCCTA+TGG 0.444913 4.2:+13505900 MS.gene08836:CDS
GAGTGAATCAAAAGTGGATC+TGG 0.446263 4.2:+13503665 MS.gene08836:CDS
TGATACCAATGGGCCAGAAC+TGG 0.447913 4.2:+13503563 MS.gene08836:CDS
ATGAGGCGGGTGGCGGAGAT+CGG 0.451393 4.2:-13502195 None:intergenic
TTCTCCCTGTTGGACAAGGC+AGG 0.452781 4.2:-13506156 None:intergenic
GAATCAACCATACTCAGTTC+CGG 0.453096 4.2:+13502294 MS.gene08836:CDS
CCGGCGCCGGCGATTCTGAT+CGG 0.453266 4.2:+13502572 MS.gene08836:CDS
AAGGTCTTGGGCAACCTCTT+CGG 0.453280 4.2:-13506385 None:intergenic
ATTGGTGAAGATGCCAGTTC+TGG 0.453428 4.2:-13503576 None:intergenic
AATGTGGATGAGGCGGGTGG+CGG 0.453864 4.2:-13502202 None:intergenic
GGTTCTCACCGGTGTAGTAT+TGG 0.455125 4.2:-13505420 None:intergenic
TATTCCCCACTTGCCGGCGC+CGG 0.457589 4.2:+13502559 MS.gene08836:CDS
CGGCGCCGGCGATTCTGATC+GGG 0.457703 4.2:+13502573 MS.gene08836:CDS
TCGCCTCGCACGGAGGTCCT+TGG 0.459092 4.2:-13502533 None:intergenic
TTGGCAATTCGGAGGAGTCT+TGG 0.461511 4.2:-13504773 None:intergenic
CTAACAACATGTTTCTGAGA+TGG 0.462834 4.2:-13506422 None:intergenic
GTGACAACTTGATCAGCTAT+AGG 0.464581 4.2:-13506114 None:intergenic
TTTGAGATGGCAAAGGAAGT+TGG 0.468342 4.2:-13504608 None:intergenic
CAAATGCTCTTTCTGCATGA+AGG 0.468866 4.2:-13506335 None:intergenic
GAGATCGGACGTTCCGTTTG+CGG 0.472640 4.2:-13502180 None:intergenic
CTTAACAAGATCGTCATCTT+CGG 0.472983 4.2:-13502458 None:intergenic
CAGGTTCATTCAATTACAAA+AGG 0.473778 4.2:+13503148 MS.gene08836:CDS
CCGATCAGAATCGCCGGCGC+CGG 0.477749 4.2:-13502572 None:intergenic
TTTCTGGGTGCTAGAGATGT+TGG 0.478007 4.2:+13503696 MS.gene08836:CDS
TTGAAATTGTTCAAAGCCCC+AGG 0.478616 4.2:+13503129 MS.gene08836:CDS
TAACAACATGTTTCTGAGAT+GGG 0.479696 4.2:-13506421 None:intergenic
ACCTCAGAATGTCAAACCTA+TGG 0.482063 4.2:+13503911 MS.gene08836:CDS
AAAGCTCACCGTACCCGCTC+CGG 0.482065 4.2:+13502235 MS.gene08836:CDS
TTCTCAGTATCTACTTGCAT+TGG 0.482411 4.2:-13503594 None:intergenic
CCTAATGATGTCATCTATGT+AGG 0.488989 4.2:+13502838 MS.gene08836:CDS
TCAAACTTGCAAGTAACTCC+TGG 0.489368 4.2:+13505871 MS.gene08836:CDS
AATCTTATCACACACCATTA+CGG 0.491836 4.2:-13504922 None:intergenic
GATGGGATACTTCCTTCATA+AGG 0.492449 4.2:-13506404 None:intergenic
CTTACATGTTTGCTCTTGAG+TGG 0.497544 4.2:-13504002 None:intergenic
AAGCTGTCAGATGAAGATTT+GGG 0.498032 4.2:+13502790 MS.gene08836:CDS
CGGGTGAATGTGGATGAGGC+GGG 0.499168 4.2:-13502208 None:intergenic
AACCAAAGGACTTTCAGATT+CGG 0.499438 4.2:+13502384 MS.gene08836:CDS
AACAGGAACGGGAACGGAAG+AGG 0.499995 4.2:-13502341 None:intergenic
CGATCTGAAAACTTAACACT+TGG 0.500039 4.2:-13507380 None:intergenic
ACCTGACTTCCATCCAAAAG+AGG 0.501538 4.2:-13506474 None:intergenic
TCGGAGGAGTCTTGGAAAGA+TGG 0.504525 4.2:-13504765 None:intergenic
CTGAAAATTCAAGCGAGGGC+CGG 0.506924 4.2:+13502944 MS.gene08836:CDS
TGATCAGCTATAGGACCTAA+AGG 0.507484 4.2:-13506105 None:intergenic
CCATGAGATGACATATTAGC+AGG 0.510296 4.2:-13504726 None:intergenic
TTGACATCTGATAATCATGA+AGG 0.512397 4.2:+13503501 MS.gene08836:CDS
CGCTCCGGTCAGATCCGGTC+CGG 0.514035 4.2:+13502250 MS.gene08836:CDS
CAAATCTTCATCTGACAGCT+TGG 0.516191 4.2:-13502788 None:intergenic
GGTTCAAAGATGCCTTCAAA+AGG 0.517017 4.2:+13505344 MS.gene08836:CDS
TATTTCTCTTATGGGCTTTG+GGG 0.517892 4.2:-13503977 None:intergenic
TTCAGGTGAAAGAAGCCTGC+AGG 0.518152 4.2:+13507190 MS.gene08836:intron
ATGCTTGAGTGAATCAAAAG+TGG 0.518162 4.2:+13503659 MS.gene08836:CDS
ACTAGATTCTTCATTTGAGA+TGG 0.520142 4.2:-13505222 None:intergenic
AATCGCCGGCGCCGGCAAGT+GGG 0.521074 4.2:-13502564 None:intergenic
CCCCTGGTTCAGTCAACTAT+AGG 0.521818 4.2:+13504348 MS.gene08836:CDS
TCGCCATCAATTGCTGAAAA+CGG 0.522563 4.2:+13502688 MS.gene08836:CDS
GCACCATGGGTGATACCAAT+GGG 0.525467 4.2:+13503553 MS.gene08836:CDS
GAATCGCCGGCGCCGGCAAG+TGG 0.526594 4.2:-13502565 None:intergenic
CTTGGCGTTAGTTCCCGAAA+AGG 0.530408 4.2:+13506246 MS.gene08836:CDS
CCTCGCACGGAGGTCCTTGG+TGG 0.530427 4.2:-13502530 None:intergenic
GACTGATCCTTGTTCCGTAA+TGG 0.533682 4.2:+13504908 MS.gene08836:CDS
CATCATTCAAGCAATGAGAA+AGG 0.534669 4.2:+13505023 MS.gene08836:CDS
TCCATAGGTTTGACATTCTG+AGG 0.534755 4.2:-13503912 None:intergenic
GAAGAGGGTTCCTCTTGAAA+CGG 0.536043 4.2:-13502325 None:intergenic
CTGAAACACCTGGATGTTGT+CGG 0.536845 4.2:+13506184 MS.gene08836:CDS
TGCGGGAACTTGAACCGGAC+CGG 0.537490 4.2:-13502264 None:intergenic
TTCATAAACCATATTTGCAC+GGG 0.537606 4.2:+13504312 MS.gene08836:CDS
GTACCCGCTCCGGTCAGATC+CGG 0.538113 4.2:+13502245 MS.gene08836:CDS
GGGAATAAATTCGCCTCGCA+CGG 0.538413 4.2:-13502543 None:intergenic
TGGCCCATTGGTATCACCCA+TGG 0.538471 4.2:-13503556 None:intergenic
GGACCGGATCTGACCGGAGC+GGG 0.538597 4.2:-13502248 None:intergenic
CCTGCTAATATGTCATCTCA+TGG 0.541971 4.2:+13504726 MS.gene08836:CDS
GAAGCTTCTTCACTTTGAGA+TGG 0.542689 4.2:-13504621 None:intergenic
GGATCTGACCGGAGCGGGTA+CGG 0.543526 4.2:-13502243 None:intergenic
AGCTTTGCTGCGGGTGAATG+TGG 0.543562 4.2:-13502218 None:intergenic
ACAGATCAACTTGATGCCCT+TGG 0.544853 4.2:+13506228 MS.gene08836:CDS
TGTGATGATATTGTGCTCAA+TGG 0.546109 4.2:+13503870 MS.gene08836:CDS
TGATTTCTCCCTGTTGGACA+AGG 0.546492 4.2:-13506160 None:intergenic
TGATCCGAAATTCCCGCAAA+CGG 0.547137 4.2:+13502167 MS.gene08836:CDS
ACAGGAACGGGAACGGAAGA+GGG 0.547351 4.2:-13502340 None:intergenic
GCGGGTGAATGTGGATGAGG+CGG 0.548554 4.2:-13502209 None:intergenic
GATCCTATGGGTGATAGTAC+AGG 0.549573 4.2:+13505913 MS.gene08836:CDS
AAGATTGATAGTTGCACCAT+GGG 0.550130 4.2:+13503540 MS.gene08836:CDS
TGTGATAAGATTGTCACAAA+TGG 0.552424 4.2:+13504933 MS.gene08836:CDS
AAGGAGTTCTCGAGATAGTA+GGG 0.552552 4.2:-13506042 None:intergenic
TATTCAAGTCAACTTTGTCA+TGG 0.552776 4.2:-13504677 None:intergenic
AGTTGTCACTAGAGAAGAAG+TGG 0.553740 4.2:+13506128 MS.gene08836:CDS
GGCTGTGCCTTAGAGCAGCT+TGG 0.560567 4.2:+13503801 MS.gene08836:CDS
ATAGGACCTAAAGGTGTGAC+TGG 0.561769 4.2:-13506096 None:intergenic
GTAGATACTGAGAAAGTGAA+TGG 0.563342 4.2:+13503603 MS.gene08836:CDS
GGAATTTCGGATCACGTCCA+TGG 0.563873 4.2:-13502158 None:intergenic
GGTTCTAAATCGCTGCCCAC+GGG 0.564160 4.2:+13505588 MS.gene08836:intron
GCATCTTTGAACCATTAACT+AGG 0.564566 4.2:-13505334 None:intergenic
GTGTTTATCTGTGCCATCTG+TGG 0.564797 4.2:+13503629 MS.gene08836:CDS
TGCACCATGGGTGATACCAA+TGG 0.565398 4.2:+13503552 MS.gene08836:CDS
GACAAGCTCCGACAACATCC+AGG 0.565824 4.2:-13506192 None:intergenic
TTGATCCTCGCATCATCCAC+AGG 0.565826 4.2:-13502718 None:intergenic
AAAAGGAACAGGAACGGGAA+CGG 0.566531 4.2:-13502347 None:intergenic
AAGAAGGTTATGGGAGGTCA+GGG 0.566531 4.2:+13503465 MS.gene08836:CDS
ATGATGCTCAAATGAAAGGT+TGG 0.567253 4.2:-13505006 None:intergenic
TACTTCCCGATCAGAATCGC+CGG 0.567923 4.2:-13502578 None:intergenic
TTGAATGATGCTCAAATGAA+AGG 0.568241 4.2:-13505010 None:intergenic
GTTCATAAACCATATTTGCA+CGG 0.569319 4.2:+13504311 MS.gene08836:CDS
AGGTTCTAAATCGCTGCCCA+CGG 0.570248 4.2:+13505587 MS.gene08836:intron
CGATGTGAGGAATGTGGAAG+AGG 0.571374 4.2:+13502876 MS.gene08836:CDS
CTTATCTGCACCCTCTGTTG+AGG 0.573087 4.2:+13504830 MS.gene08836:CDS
GATAAGATTGTCACAAATGG+TGG 0.573529 4.2:+13504936 MS.gene08836:CDS
AGATGCCAGTTCTGGCCCAT+TGG 0.574730 4.2:-13503568 None:intergenic
GGAAAATGGCAGTGTGAGGA+CGG 0.575753 4.2:+13502633 MS.gene08836:CDS
ATCGCCGGCGCCGGCAAGTG+GGG 0.577299 4.2:-13502563 None:intergenic
AACAGAAATTGGTGAAACAA+AGG 0.578081 4.2:-13506061 None:intergenic
GTGAATGTGGATGAGGCGGG+TGG 0.579031 4.2:-13502205 None:intergenic
GGTACGGTGAGCTTTGCTGC+GGG 0.582951 4.2:-13502227 None:intergenic
TCTTCACTTTGAGATGGCAA+AGG 0.583276 4.2:-13504615 None:intergenic
GGGGCTTTGAACAATTTCAA+AGG 0.583740 4.2:-13503126 None:intergenic
GTTGGTAATGCTTTCGACCA+CGG 0.584626 4.2:+13503714 MS.gene08836:CDS
TCACACACCATTACGGAACA+AGG 0.589266 4.2:-13504915 None:intergenic
AAAAGGCTAATGGATGCTAT+GGG 0.591299 4.2:+13503165 MS.gene08836:CDS
TTTGTAATTGAATGAACCTG+GGG 0.594391 4.2:-13503145 None:intergenic
TGTGGAAACGATGTAACCAA+AGG 0.595525 4.2:+13502370 MS.gene08836:CDS
TGAAACAGAACAACTTGCAA+AGG 0.595999 4.2:+13507221 MS.gene08836:CDS
GAATCTGAAATTGGCAGAAG+TGG 0.596355 4.2:-13505850 None:intergenic
GGTTCAAGTTCCGTTTCAAG+AGG 0.600363 4.2:+13502315 MS.gene08836:CDS
GCTGCGGGTGAATGTGGATG+AGG 0.602043 4.2:-13502212 None:intergenic
GGGAAGCTGATCAAAACCCC+TGG 0.602371 4.2:+13504332 MS.gene08836:CDS
TGAACCGGACCGGATCTGAC+CGG 0.603361 4.2:-13502254 None:intergenic
GAATAATCTTGACTGTGCTA+AGG 0.603599 4.2:+13503764 MS.gene08836:CDS
CCACCAAGGACCTCCGTGCG+AGG 0.606940 4.2:+13502530 MS.gene08836:CDS
TCAGAGTTAGCCTCAACAGA+GGG 0.608322 4.2:-13504840 None:intergenic
TCATTGTCATGAAGACAAGA+AGG 0.608420 4.2:+13503449 MS.gene08836:CDS
GACACTGCAACACATGGTGG+TGG 0.614063 4.2:+13505287 MS.gene08836:CDS
GAGAAATCACCTGAAACACC+TGG 0.614071 4.2:+13506174 MS.gene08836:CDS
AGGTCCTTGGTGGTAGCACA+AGG 0.615884 4.2:-13502520 None:intergenic
TTCTGGAAAATGGCAGTGTG+AGG 0.618228 4.2:+13502629 MS.gene08836:CDS
CTGGTTCAGTCAACTATAGG+AGG 0.621061 4.2:+13504351 MS.gene08836:CDS
GGGTACGGTGAGCTTTGCTG+CGG 0.621821 4.2:-13502228 None:intergenic
GGTTGCCCAAGACCTTATGA+AGG 0.622380 4.2:+13506392 MS.gene08836:CDS
AGCAGACAAATGACTGTCAG+TGG 0.623587 4.2:+13504648 MS.gene08836:CDS
CCAAAAGCTTCTGAAGTTTG+GGG 0.630512 4.2:-13505819 None:intergenic
TCAGCTGCTAGATGCCGAAG+AGG 0.631980 4.2:+13506371 MS.gene08836:CDS
GTAGCTGAAAATTCAAGCGA+GGG 0.632081 4.2:+13502940 MS.gene08836:CDS
TAGAAGCTAGCTGCGATGTG+AGG 0.635076 4.2:+13502863 MS.gene08836:CDS
CTCAGAGTTAGCCTCAACAG+AGG 0.638818 4.2:-13504841 None:intergenic
CCTATAGTTGACTGAACCAG+GGG 0.639145 4.2:-13504348 None:intergenic
TTTAGACTCTGAGCTTCAGG+AGG 0.640447 4.2:-13505104 None:intergenic
TGTAGCTGAAAATTCAAGCG+AGG 0.644391 4.2:+13502939 MS.gene08836:CDS
AACAATTTCAAAGGTAAACG+CGG 0.645334 4.2:-13503117 None:intergenic
TTACCAGACACTGCAACACA+TGG 0.645552 4.2:+13505281 MS.gene08836:CDS
TCAAATGATTGTGATCCTAT+GGG 0.646538 4.2:+13505901 MS.gene08836:CDS
TTTCCTGTACTATCACCCAT+AGG 0.646734 4.2:-13505916 None:intergenic
TCATGATTATCAGATGTCAA+AGG 0.647040 4.2:-13503498 None:intergenic
TAAGATTGATAGTTGCACCA+TGG 0.648864 4.2:+13503539 MS.gene08836:CDS
TACACCTGCCTTGTCCAACA+GGG 0.649992 4.2:+13506152 MS.gene08836:CDS
AAATTGTATTGGCAATTCGG+AGG 0.653709 4.2:-13504781 None:intergenic
AAGCATTTATCATCCACAGA+TGG 0.656457 4.2:-13503642 None:intergenic
AAAACCCAAGAGGATGCAGA+GGG 0.661927 4.2:+13506280 MS.gene08836:CDS
AGAGGCGGATTTATATGCAA+AGG 0.665530 4.2:+13504581 MS.gene08836:CDS
TCCTATAGTTGACTGAACCA+GGG 0.668929 4.2:-13504349 None:intergenic
GCTAAGGCTGCTGATCACAA+TGG 0.673146 4.2:+13503780 MS.gene08836:CDS
ATACACCTGTGGATGATGCG+AGG 0.679193 4.2:+13502713 MS.gene08836:CDS
TTTGGAATCCAATACTACAC+CGG 0.686242 4.2:+13505412 MS.gene08836:CDS
ATTCCCCTATCAAAATTCAG+AGG 0.686862 4.2:-13502763 None:intergenic
ATAAGATTGTCACAAATGGT+GGG 0.687693 4.2:+13504937 MS.gene08836:CDS
AATAAATTCGCCTCGCACGG+AGG 0.688523 4.2:-13502540 None:intergenic
GTTGCAGTGTCTGGTAACGC+AGG 0.694475 4.2:-13505275 None:intergenic
GTTGTCACTAGAGAAGAAGT+GGG 0.694605 4.2:+13506129 MS.gene08836:CDS
TCTACCTTGTGCTACCACCA+AGG 0.697929 4.2:+13502516 MS.gene08836:CDS
GAAGACAAGAAGGTTATGGG+AGG 0.705451 4.2:+13503459 MS.gene08836:CDS
ACATAGATGACATCATTAGG+TGG 0.709990 4.2:-13502835 None:intergenic
CCAGACACTGCAACACATGG+TGG 0.710994 4.2:+13505284 MS.gene08836:CDS
TGAAAACGGCGATACACCTG+TGG 0.720243 4.2:+13502702 MS.gene08836:CDS
TAGCTGCGATGTGAGGAATG+TGG 0.763594 4.2:+13502870 MS.gene08836:CDS
CGGACCGGATCTGACCGGAG+CGG 0.781159 4.2:-13502249 None:intergenic
AATCTTGCTTAACATCACCG+TGG 0.800564 4.2:-13503731 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATAATATTA+TGG + chr4.2:13504496-13504515 MS.gene08836:intron 0.0%
!! AAATAAACAAATTGTTTATT+TGG - chr4.2:13507331-13507350 None:intergenic 10.0%
!!! TTTTTTATTTGAATATTTTC+AGG + chr4.2:13507173-13507192 MS.gene08836:intron 10.0%
!! ATTCAATCAATAAATAACAA+AGG - chr4.2:13503344-13503363 None:intergenic 15.0%
!! ATTTAAATAACCAAACTTAT+CGG - chr4.2:13506675-13506694 None:intergenic 15.0%
!! TGATGAAAATAAAAATTGAA+AGG - chr4.2:13503006-13503025 None:intergenic 15.0%
!!! TGATATAAATTTATTTTCTC+AGG + chr4.2:13506820-13506839 MS.gene08836:intron 15.0%
!! AATTATATATCATGTAACCT+GGG + chr4.2:13504276-13504295 MS.gene08836:intron 20.0%
!! ATAAAATGATCAGAAAAGAA+AGG - chr4.2:13506546-13506565 None:intergenic 20.0%
!! GATATATACACAAAAGATTA+TGG - chr4.2:13505444-13505463 None:intergenic 20.0%
!! GCAAAATATTATAAACTTGT+CGG - chr4.2:13506874-13506893 None:intergenic 20.0%
!! TAAACAAATTGTTTATTTGG+AGG - chr4.2:13507328-13507347 None:intergenic 20.0%
!! TAATGTAGCATAAAAATAAG+AGG + chr4.2:13507126-13507145 MS.gene08836:intron 20.0%
!! TGAAATGAAATAATAGTGAA+AGG - chr4.2:13506716-13506735 None:intergenic 20.0%
!! TGCAAACAACTAAATAATAA+AGG - chr4.2:13503224-13503243 None:intergenic 20.0%
!! TTAATATTGTATTGCATAAG+TGG - chr4.2:13504441-13504460 None:intergenic 20.0%
!!! ACTAAACTTATACTACTTTT+AGG + chr4.2:13505775-13505794 MS.gene08836:intron 20.0%
!!! AGTATTGGTTTTTATTCTAT+TGG + chr4.2:13505695-13505714 MS.gene08836:intron 20.0%
!!! ATGAAATTTTGTTAGTTGAT+TGG + chr4.2:13503072-13503091 MS.gene08836:intron 20.0%
!!! ATTAAGCAAATTTTGTTCTT+TGG - chr4.2:13504970-13504989 None:intergenic 20.0%
!!! TAACCATTTTTTAATCTGTT+TGG - chr4.2:13507428-13507447 None:intergenic 20.0%
!!! TTAAGCAAATTTTGTTCTTT+GGG - chr4.2:13504969-13504988 None:intergenic 20.0%
!!! TTAAGTTTTTAAAACATGCT+GGG + chr4.2:13505611-13505630 MS.gene08836:CDS 20.0%
!!! TTTTTCTCAAAATTCCTTTT+CGG - chr4.2:13506263-13506282 None:intergenic 20.0%
! AAAAAAATGGCAAAGTTACT+TGG - chr4.2:13506967-13506986 None:intergenic 25.0%
! AAAAGGAAGCAATAACAAAA+AGG + chr4.2:13505361-13505380 MS.gene08836:CDS 25.0%
! AAAGAAAAAAGTCTTCTGAA+TGG + chr4.2:13505311-13505330 MS.gene08836:CDS 25.0%
! AAATCTCTATGAACAGAAAT+TGG - chr4.2:13506075-13506094 None:intergenic 25.0%
! AACCAAATTGACATTGTATT+AGG - chr4.2:13504122-13504141 None:intergenic 25.0%
! ATAAAACCTCAAGTAAATTC+TGG + chr4.2:13506910-13506929 MS.gene08836:intron 25.0%
! ATTCAATTACAAAAGGCTAA+TGG + chr4.2:13503155-13503174 MS.gene08836:CDS 25.0%
! CAACCAAACAGATTAAAAAA+TGG + chr4.2:13507422-13507441 MS.gene08836:CDS 25.0%
! CAATTATATATCATGTAACC+TGG + chr4.2:13504275-13504294 MS.gene08836:intron 25.0%
! CTGAATTTATTAAGTTACAC+GGG - chr4.2:13507073-13507092 None:intergenic 25.0%
! GAATAAAAACCAATACTTAC+AGG - chr4.2:13505692-13505711 None:intergenic 25.0%
! GCTGAATTTATTAAGTTACA+CGG - chr4.2:13507074-13507093 None:intergenic 25.0%
! TACCTAATACAATGTCAATT+TGG + chr4.2:13504117-13504136 MS.gene08836:intron 25.0%
! TATAATCAATGAGAAAGAGA+GGG - chr4.2:13505498-13505517 None:intergenic 25.0%
! TGACAATATATGCATATACA+TGG + chr4.2:13504237-13504256 MS.gene08836:intron 25.0%
! TTATAATCAATGAGAAAGAG+AGG - chr4.2:13505499-13505518 None:intergenic 25.0%
! TTGACATTGTATTAGGTATT+AGG - chr4.2:13504115-13504134 None:intergenic 25.0%
! TTGGGAAGATTCTTAAAATA+TGG - chr4.2:13504383-13504402 None:intergenic 25.0%
! TTTATAGGAATACCGAAATT+GGG + chr4.2:13503426-13503445 MS.gene08836:intron 25.0%
!! AATTGGCATCGTAATTTTAT+AGG + chr4.2:13503411-13503430 MS.gene08836:intron 25.0%
!! TATTTGGAGGAACAAATTTT+GGG - chr4.2:13507315-13507334 None:intergenic 25.0%
!! TTATTTGGAGGAACAAATTT+TGG - chr4.2:13507316-13507335 None:intergenic 25.0%
!! TTCTCATTTTCCAACAAAAT+CGG - chr4.2:13505661-13505680 None:intergenic 25.0%
!! TTGATCAAGTAATTTTGAAC+AGG + chr4.2:13505567-13505586 MS.gene08836:intron 25.0%
!! TTTTATAGGAATACCGAAAT+TGG + chr4.2:13503425-13503444 MS.gene08836:intron 25.0%
!! TTTTCTCAAAATTCCTTTTC+GGG - chr4.2:13506262-13506281 None:intergenic 25.0%
!! TTTTGTAATTGAATGAACCT+GGG - chr4.2:13503149-13503168 None:intergenic 25.0%
!!! ATACATGGTTTTGTATTTGT+TGG + chr4.2:13504252-13504271 MS.gene08836:intron 25.0%
!!! ATTTAGTTTTACATGTGCAA+CGG + chr4.2:13503258-13503277 MS.gene08836:intron 25.0%
!!! CTTGAGGTTTTATTTCTAAA+TGG - chr4.2:13506903-13506922 None:intergenic 25.0%
!!! GTTAAGTTTTTAAAACATGC+TGG + chr4.2:13505610-13505629 MS.gene08836:CDS 25.0%
AACAATTTCAAAGGTAAACG+CGG - chr4.2:13503120-13503139 None:intergenic 30.0%
AACAGAAATTGGTGAAACAA+AGG - chr4.2:13506064-13506083 None:intergenic 30.0%
AATCTTATCACACACCATTA+CGG - chr4.2:13504925-13504944 None:intergenic 30.0%
ACAATTTGACGCAAAAGAAA+TGG + chr4.2:13504797-13504816 MS.gene08836:CDS 30.0%
ACATTACCATAGTCATCTTT+GGG - chr4.2:13504401-13504420 None:intergenic 30.0%
ACTAGATTCTTCATTTGAGA+TGG - chr4.2:13505225-13505244 None:intergenic 30.0%
AGTCTAATTCCTGTAAGTAT+TGG + chr4.2:13505680-13505699 MS.gene08836:intron 30.0%
ATAAGATTGTCACAAATGGT+GGG + chr4.2:13504937-13504956 MS.gene08836:CDS 30.0%
ATAATCAATGAGAAAGAGAG+GGG - chr4.2:13505497-13505516 None:intergenic 30.0%
ATAGTCATATCAACATCATG+TGG - chr4.2:13506505-13506524 None:intergenic 30.0%
ATTATCTCATCCGATAAGTT+TGG + chr4.2:13506662-13506681 MS.gene08836:intron 30.0%
CAACTATCAATCTTAGTTTC+AGG - chr4.2:13503534-13503553 None:intergenic 30.0%
CAGCTGAAATTTCTGAATTA+GGG + chr4.2:13502659-13502678 MS.gene08836:CDS 30.0%
CAGGTTCATTCAATTACAAA+AGG + chr4.2:13503148-13503167 MS.gene08836:CDS 30.0%
CTTCACGATAATAACTGAAA+TGG + chr4.2:13506570-13506589 MS.gene08836:intron 30.0%
GAAATTTCTGAATTAGGGTT+TGG + chr4.2:13502664-13502683 MS.gene08836:CDS 30.0%
GGTCAAATGCACTAAAAAAA+TGG - chr4.2:13506980-13506999 None:intergenic 30.0%
GTTCATAAACCATATTTGCA+CGG + chr4.2:13504311-13504330 MS.gene08836:CDS 30.0%
TAATAGTGAAAGGAATTGCA+AGG - chr4.2:13506706-13506725 None:intergenic 30.0%
TACATTACCATAGTCATCTT+TGG - chr4.2:13504402-13504421 None:intergenic 30.0%
TATCTTGTAGTTGAGATCTT+GGG - chr4.2:13506002-13506021 None:intergenic 30.0%
TATTCAAGTCAACTTTGTCA+TGG - chr4.2:13504680-13504699 None:intergenic 30.0%
TCAAATGAAGCTATCTCATA+AGG - chr4.2:13507001-13507020 None:intergenic 30.0%
TCAAATGATTGTGATCCTAT+GGG + chr4.2:13505901-13505920 MS.gene08836:CDS 30.0%
TCAGCTGAAATTTCTGAATT+AGG + chr4.2:13502658-13502677 MS.gene08836:CDS 30.0%
TCATGATTATCAGATGTCAA+AGG - chr4.2:13503501-13503520 None:intergenic 30.0%
TCTTCAGCATCTAACATATT+AGG - chr4.2:13505140-13505159 None:intergenic 30.0%
TGTGATAAGATTGTCACAAA+TGG + chr4.2:13504933-13504952 MS.gene08836:CDS 30.0%
TGTTAAGATCATCATTCATC+TGG - chr4.2:13507257-13507276 None:intergenic 30.0%
TGTTTAAACTTCCACTATAG+TGG + chr4.2:13504179-13504198 MS.gene08836:intron 30.0%
TTAAGCAAGATTCTTTCAAC+AGG + chr4.2:13503742-13503761 MS.gene08836:CDS 30.0%
TTATCTTGTAGTTGAGATCT+TGG - chr4.2:13506003-13506022 None:intergenic 30.0%
TTATTATGCAAAGCTTGTGA+TGG + chr4.2:13506625-13506644 MS.gene08836:intron 30.0%
TTCAAAGGAGTAAATCTGTA+AGG + chr4.2:13502980-13502999 MS.gene08836:intron 30.0%
TTCAAATGATTGTGATCCTA+TGG + chr4.2:13505900-13505919 MS.gene08836:CDS 30.0%
TTCATAAACCATATTTGCAC+GGG + chr4.2:13504312-13504331 MS.gene08836:CDS 30.0%
TTGAATGATGCTCAAATGAA+AGG - chr4.2:13505013-13505032 None:intergenic 30.0%
TTGACATCTGATAATCATGA+AGG + chr4.2:13503501-13503520 MS.gene08836:CDS 30.0%
TTGATCTGTGACTTTCATTT+CGG - chr4.2:13506217-13506236 None:intergenic 30.0%
TTTCATCATTGCATATGTGT+TGG + chr4.2:13503018-13503037 MS.gene08836:intron 30.0%
TTTGTAATTGAATGAACCTG+GGG - chr4.2:13503148-13503167 None:intergenic 30.0%
! ATTATTTCTCTTATGGGCTT+TGG - chr4.2:13503982-13504001 None:intergenic 30.0%
! CTTTTGTAATTGAATGAACC+TGG - chr4.2:13503150-13503169 None:intergenic 30.0%
! GATACTATTGTACGTGATTT+TGG + chr4.2:13503297-13503316 MS.gene08836:intron 30.0%
! GCATATAAAGACGTTGATAA+TGG - chr4.2:13507096-13507115 None:intergenic 30.0%
! GGTAAATCTTAAAAGTATGC+AGG - chr4.2:13505476-13505495 None:intergenic 30.0%
! GTCAAATTGTATTGGCAATT+CGG - chr4.2:13504787-13504806 None:intergenic 30.0%
! TCTTTTGCGTCAAATTGTAT+TGG - chr4.2:13504795-13504814 None:intergenic 30.0%
! TGCAAGTTTGAATCTGAAAT+TGG - chr4.2:13505862-13505881 None:intergenic 30.0%
! TTATTTCTCTTATGGGCTTT+GGG - chr4.2:13503981-13504000 None:intergenic 30.0%
!! AGGAACAAATTTTGGGAATA+AGG - chr4.2:13507308-13507327 None:intergenic 30.0%
!! ATTTGTTTTCTGCCAGTTAT+GGG + chr4.2:13504045-13504064 MS.gene08836:intron 30.0%
!! ATTTTGAGAAAAAACCCAAG+AGG + chr4.2:13506270-13506289 MS.gene08836:CDS 30.0%
!! CAAAGTTGACTTGAATACTT+TGG + chr4.2:13504683-13504702 MS.gene08836:CDS 30.0%
!! GAGTGGATTATTTCTCTTAT+GGG - chr4.2:13503988-13504007 None:intergenic 30.0%
!! TAACAACATGTTTCTGAGAT+GGG - chr4.2:13506424-13506443 None:intergenic 30.0%
!! TATTTGTTTTCTGCCAGTTA+TGG + chr4.2:13504044-13504063 MS.gene08836:intron 30.0%
!! TGAGTGGATTATTTCTCTTA+TGG - chr4.2:13503989-13504008 None:intergenic 30.0%
!! TTAAAAGTATGCAGGTCTTT+TGG - chr4.2:13505468-13505487 None:intergenic 30.0%
!! TTGTTATTGCTTCCTTTTGA+AGG - chr4.2:13505359-13505378 None:intergenic 30.0%
!!! GTTTTAAAAACTTAACCCGT+GGG - chr4.2:13505606-13505625 None:intergenic 30.0%
!!! TGTTTTAAAAACTTAACCCG+TGG - chr4.2:13505607-13505626 None:intergenic 30.0%
!!! TTTGAACAGAGCTATTTTTC+CGG - chr4.2:13502966-13502985 None:intergenic 30.0%
AACCAAAGGACTTTCAGATT+CGG + chr4.2:13502384-13502403 MS.gene08836:CDS 35.0%
AAGCATTTATCATCCACAGA+TGG - chr4.2:13503645-13503664 None:intergenic 35.0%
AAGCTGTCAGATGAAGATTT+GGG + chr4.2:13502790-13502809 MS.gene08836:CDS 35.0%
AATCTTCCCAAAGATGACTA+TGG + chr4.2:13504392-13504411 MS.gene08836:CDS 35.0%
ACATAGATGACATCATTAGG+TGG - chr4.2:13502838-13502857 None:intergenic 35.0%
ACTTGGAATTTCTCACCATA+GGG - chr4.2:13506950-13506969 None:intergenic 35.0%
AGCTCAGAGTCTAAATCAAT+TGG + chr4.2:13505112-13505131 MS.gene08836:CDS 35.0%
ATACTTCCTTCATAAGGTCT+TGG - chr4.2:13506401-13506420 None:intergenic 35.0%
ATATGTGCGATGGAACTAAT+TGG + chr4.2:13503394-13503413 MS.gene08836:intron 35.0%
ATGATGCTCAAATGAAAGGT+TGG - chr4.2:13505009-13505028 None:intergenic 35.0%
ATGCTTGAGTGAATCAAAAG+TGG + chr4.2:13503659-13503678 MS.gene08836:CDS 35.0%
ATTCCCCTATCAAAATTCAG+AGG - chr4.2:13502766-13502785 None:intergenic 35.0%
ATTTCAGTATCACGAGTCAT+TGG - chr4.2:13503849-13503868 None:intergenic 35.0%
CAAAAGATTATGGTTCTCAC+CGG - chr4.2:13505434-13505453 None:intergenic 35.0%
CAAAATGTCTAACCCATAAC+TGG - chr4.2:13504060-13504079 None:intergenic 35.0%
CAATCATTTGAATCACTTCC+AGG - chr4.2:13505892-13505911 None:intergenic 35.0%
CATCATTCAAGCAATGAGAA+AGG + chr4.2:13505023-13505042 MS.gene08836:CDS 35.0%
CATGAAGACAAGAAGGTTAT+GGG + chr4.2:13503456-13503475 MS.gene08836:CDS 35.0%
CCTAATGATGTCATCTATGT+AGG + chr4.2:13502838-13502857 MS.gene08836:CDS 35.0%
CCTACATAGATGACATCATT+AGG - chr4.2:13502841-13502860 None:intergenic 35.0%
CGATCTGAAAACTTAACACT+TGG - chr4.2:13507383-13507402 None:intergenic 35.0%
CTAAAAAAAAACCCAGCTGA+GGG - chr4.2:13504148-13504167 None:intergenic 35.0%
CTTAACAAGATCGTCATCTT+CGG - chr4.2:13502461-13502480 None:intergenic 35.0%
GAATAATCTTGACTGTGCTA+AGG + chr4.2:13503764-13503783 MS.gene08836:CDS 35.0%
GATAAGATTGTCACAAATGG+TGG + chr4.2:13504936-13504955 MS.gene08836:CDS 35.0%
GATGCTATGGGAGATAATTT+CGG + chr4.2:13503177-13503196 MS.gene08836:CDS 35.0%
GCATCTTTGAACCATTAACT+AGG - chr4.2:13505337-13505356 None:intergenic 35.0%
GTAGATACTGAGAAAGTGAA+TGG + chr4.2:13503603-13503622 MS.gene08836:CDS 35.0%
GTTACATCGTTTCCACAAAA+AGG - chr4.2:13502367-13502386 None:intergenic 35.0%
TACTTCCTTCATAAGGTCTT+GGG - chr4.2:13506400-13506419 None:intergenic 35.0%
TACTTGGAATTTCTCACCAT+AGG - chr4.2:13506951-13506970 None:intergenic 35.0%
TATTTCTCTTATGGGCTTTG+GGG - chr4.2:13503980-13503999 None:intergenic 35.0%
TCATGAAGACAAGAAGGTTA+TGG + chr4.2:13503455-13503474 MS.gene08836:CDS 35.0%
TCATGACAATGACCCAATTT+CGG - chr4.2:13503441-13503460 None:intergenic 35.0%
TCATTGTCATGAAGACAAGA+AGG + chr4.2:13503449-13503468 MS.gene08836:CDS 35.0%
TGAAACAGAACAACTTGCAA+AGG + chr4.2:13507221-13507240 MS.gene08836:CDS 35.0%
TGGTGAGATGAAAAATGGTT+TGG + chr4.2:13505394-13505413 MS.gene08836:CDS 35.0%
TGTGATGATATTGTGCTCAA+TGG + chr4.2:13503870-13503889 MS.gene08836:CDS 35.0%
TTCTCAGTATCTACTTGCAT+TGG - chr4.2:13503597-13503616 None:intergenic 35.0%
TTGCAAAAATGACGATGTTG+TGG + chr4.2:13505184-13505203 MS.gene08836:CDS 35.0%
TTTGCTGGTGAGATGAAAAA+TGG + chr4.2:13505389-13505408 MS.gene08836:CDS 35.0%
! AAAAGGCTAATGGATGCTAT+GGG + chr4.2:13503165-13503184 MS.gene08836:CDS 35.0%
! AAATTGTATTGGCAATTCGG+AGG - chr4.2:13504784-13504803 None:intergenic 35.0%
! AAGATTGATAGTTGCACCAT+GGG + chr4.2:13503540-13503559 MS.gene08836:CDS 35.0%
! AAGATTGCTTCCGATTTTGT+TGG + chr4.2:13505648-13505667 MS.gene08836:CDS 35.0%
! AATTAGCTTGATATGTGCGA+TGG + chr4.2:13503384-13503403 MS.gene08836:intron 35.0%
! ACACGTTTTGCTTTCTTGAA+AGG - chr4.2:13502487-13502506 None:intergenic 35.0%
! AGCAAATTTTGTTCTTTGGG+TGG - chr4.2:13504966-13504985 None:intergenic 35.0%
! CTAACAACATGTTTCTGAGA+TGG - chr4.2:13506425-13506444 None:intergenic 35.0%
! GGAAAAATAGCTCTGTTCAA+AGG + chr4.2:13502965-13502984 MS.gene08836:CDS 35.0%
! TAAGATTGATAGTTGCACCA+TGG + chr4.2:13503539-13503558 MS.gene08836:CDS 35.0%
! TAAGTTTTCAGATCGTGTTG+AGG + chr4.2:13507388-13507407 MS.gene08836:CDS 35.0%
! TCTTGGAAAGATGGCAATTT+TGG - chr4.2:13504759-13504778 None:intergenic 35.0%
! TTGGTAGTTGTTCTATGTAG+AGG + chr4.2:13503316-13503335 MS.gene08836:intron 35.0%
! TTTGGAATCCAATACTACAC+CGG + chr4.2:13505412-13505431 MS.gene08836:CDS 35.0%
!! ATCCAAAAGCTTCTGAAGTT+TGG - chr4.2:13505824-13505843 None:intergenic 35.0%
!! ATGGTTGATTCTTTTTGCTG+CGG - chr4.2:13502285-13502304 None:intergenic 35.0%
!! TCCAAAAGCTTCTGAAGTTT+GGG - chr4.2:13505823-13505842 None:intergenic 35.0%
!!! AAAGTGCTTGCTGATTTTAC+AGG + chr4.2:13504525-13504544 MS.gene08836:intron 35.0%
!!! AACAAAAAGGCTAGTTTTGC+TGG + chr4.2:13505374-13505393 MS.gene08836:CDS 35.0%
!!! CGTCATTTTTGCAAATTGCA+TGG - chr4.2:13505178-13505197 None:intergenic 35.0%
!!! CTCAGCTGGGTTTTTTTTTA+GGG + chr4.2:13504147-13504166 MS.gene08836:intron 35.0%
AAAGGAGTTCTCGAGATAGT+AGG - chr4.2:13506046-13506065 None:intergenic 40.0%
AAGAAAGCAGTTTGTGAGTC+TGG + chr4.2:13505055-13505074 MS.gene08836:CDS 40.0%
AAGGAGTTCTCGAGATAGTA+GGG - chr4.2:13506045-13506064 None:intergenic 40.0%
AATCTTGCTTAACATCACCG+TGG - chr4.2:13503734-13503753 None:intergenic 40.0%
AATTTGGTTAAACCCTCAGC+TGG + chr4.2:13504133-13504152 MS.gene08836:intron 40.0%
ACCTCAGAATGTCAAACCTA+TGG + chr4.2:13503911-13503930 MS.gene08836:CDS 40.0%
AGTGCTTTCTTGAGTGTTTC+TGG - chr4.2:13503943-13503962 None:intergenic 40.0%
AGTTGTCACTAGAGAAGAAG+TGG + chr4.2:13506128-13506147 MS.gene08836:CDS 40.0%
ATAAGTGGTTGAAAACGTGG+TGG - chr4.2:13504426-13504445 None:intergenic 40.0%
ATAGGGCCAGAATTTACTTG+AGG - chr4.2:13506919-13506938 None:intergenic 40.0%
ATCGGGAAGTAGCTGAATTA+GGG + chr4.2:13502590-13502609 MS.gene08836:CDS 40.0%
ATTTGGTTAAACCCTCAGCT+GGG + chr4.2:13504134-13504153 MS.gene08836:intron 40.0%
CAAATCTTCATCTGACAGCT+TGG - chr4.2:13502791-13502810 None:intergenic 40.0%
CAAATGCTCTTTCTGCATGA+AGG - chr4.2:13506338-13506357 None:intergenic 40.0%
CAAGCTGTCAGATGAAGATT+TGG + chr4.2:13502789-13502808 MS.gene08836:CDS 40.0%
CCATCACAAAAATGAAGAGG+CGG + chr4.2:13504566-13504585 MS.gene08836:CDS 40.0%
CCATGAGATGACATATTAGC+AGG - chr4.2:13504729-13504748 None:intergenic 40.0%
CCTAAAAAAAAACCCAGCTG+AGG - chr4.2:13504149-13504168 None:intergenic 40.0%
CCTGCTAATATGTCATCTCA+TGG + chr4.2:13504726-13504745 MS.gene08836:CDS 40.0%
CGAAGATGACGATCTTGTTA+AGG + chr4.2:13502459-13502478 MS.gene08836:CDS 40.0%
CTTACATGTTTGCTCTTGAG+TGG - chr4.2:13504005-13504024 None:intergenic 40.0%
CTTCTGAATGGCCTAGTTAA+TGG + chr4.2:13505323-13505342 MS.gene08836:CDS 40.0%
CTTGGAATTTCTCACCATAG+GGG - chr4.2:13506949-13506968 None:intergenic 40.0%
GAATCAACCATACTCAGTTC+CGG + chr4.2:13502294-13502313 MS.gene08836:CDS 40.0%
GAGTGAATCAAAAGTGGATC+TGG + chr4.2:13503665-13503684 MS.gene08836:CDS 40.0%
GATGGGATACTTCCTTCATA+AGG - chr4.2:13506407-13506426 None:intergenic 40.0%
GATTTACCAGTCACACCTTT+AGG + chr4.2:13506090-13506109 MS.gene08836:CDS 40.0%
GGAATAAGGTATGCACATAC+AGG - chr4.2:13507294-13507313 None:intergenic 40.0%
GGTGATAGTACAGGAAATTC+TGG + chr4.2:13505922-13505941 MS.gene08836:CDS 40.0%
GGTTCAAAGATGCCTTCAAA+AGG + chr4.2:13505344-13505363 MS.gene08836:CDS 40.0%
GTAGCTGAAAATTCAAGCGA+GGG + chr4.2:13502940-13502959 MS.gene08836:CDS 40.0%
GTGACAACTTGATCAGCTAT+AGG - chr4.2:13506117-13506136 None:intergenic 40.0%
GTTGATTGGATTCTTGATGC+AGG + chr4.2:13503086-13503105 MS.gene08836:intron 40.0%
GTTGTCACTAGAGAAGAAGT+GGG + chr4.2:13506129-13506148 MS.gene08836:CDS 40.0%
TAAACTTCCACTATAGTGGC+TGG + chr4.2:13504183-13504202 MS.gene08836:intron 40.0%
TCAAACTTGCAAGTAACTCC+TGG + chr4.2:13505871-13505890 MS.gene08836:CDS 40.0%
TCCACAAAAAGGAACAGGAA+CGG - chr4.2:13502356-13502375 None:intergenic 40.0%
TCCATAGGTTTGACATTCTG+AGG - chr4.2:13503915-13503934 None:intergenic 40.0%
TCCTATAGTTGACTGAACCA+GGG - chr4.2:13504352-13504371 None:intergenic 40.0%
TCGCCATCAATTGCTGAAAA+CGG + chr4.2:13502688-13502707 MS.gene08836:CDS 40.0%
TCGTTTCCACAAAAAGGAAC+AGG - chr4.2:13502361-13502380 None:intergenic 40.0%
TCTTGAAACGGAACTTGAAC+CGG - chr4.2:13502316-13502335 None:intergenic 40.0%
TGATCAGCTATAGGACCTAA+AGG - chr4.2:13506108-13506127 None:intergenic 40.0%
TGATTTAGACTCTGAGCTTC+AGG - chr4.2:13505110-13505129 None:intergenic 40.0%
TGCATAAGTGGTTGAAAACG+TGG - chr4.2:13504429-13504448 None:intergenic 40.0%
TGTAGCTGAAAATTCAAGCG+AGG + chr4.2:13502939-13502958 MS.gene08836:CDS 40.0%
TGTGGAAACGATGTAACCAA+AGG + chr4.2:13502370-13502389 MS.gene08836:CDS 40.0%
TTCAGATCGTGTTGAGGAAA+AGG + chr4.2:13507394-13507413 MS.gene08836:CDS 40.0%
TTCCGAATCTGAAAGTCCTT+TGG - chr4.2:13502389-13502408 None:intergenic 40.0%
TTGAAATTGTTCAAAGCCCC+AGG + chr4.2:13503129-13503148 MS.gene08836:CDS 40.0%
TTGGAATTTCTCACCATAGG+GGG - chr4.2:13506948-13506967 None:intergenic 40.0%
TTTCCTGTACTATCACCCAT+AGG - chr4.2:13505919-13505938 None:intergenic 40.0%
! AGAGGCGGATTTATATGCAA+AGG + chr4.2:13504581-13504600 MS.gene08836:CDS 40.0%
! CAAAAGGCTAATGGATGCTA+TGG + chr4.2:13503164-13503183 MS.gene08836:CDS 40.0%
! GAAGCTTCTTCACTTTGAGA+TGG - chr4.2:13504624-13504643 None:intergenic 40.0%
! GAATCTGAAATTGGCAGAAG+TGG - chr4.2:13505853-13505872 None:intergenic 40.0%
! TTTGAGATGGCAAAGGAAGT+TGG - chr4.2:13504611-13504630 None:intergenic 40.0%
! TTTTCAGCTACATTAGCAGC+AGG - chr4.2:13502931-13502950 None:intergenic 40.0%
!! ACGAGCCTCTGAATTTTGAT+AGG + chr4.2:13502758-13502777 MS.gene08836:CDS 40.0%
!! ATTAGGGTTTTATGCTCCGT+CGG + chr4.2:13502606-13502625 MS.gene08836:CDS 40.0%
!! CCAAAAGCTTCTGAAGTTTG+GGG - chr4.2:13505822-13505841 None:intergenic 40.0%
!! CGAGCCTCTGAATTTTGATA+GGG + chr4.2:13502759-13502778 MS.gene08836:CDS 40.0%
!! CGCCTCTTCATTTTTGTGAT+GGG - chr4.2:13504568-13504587 None:intergenic 40.0%
!! GAGCCTCTGAATTTTGATAG+GGG + chr4.2:13502760-13502779 MS.gene08836:CDS 40.0%
!! GCTGATTTTACAGGTACATC+TGG + chr4.2:13504534-13504553 MS.gene08836:intron 40.0%
!! GGGGCTTTGAACAATTTCAA+AGG - chr4.2:13503129-13503148 None:intergenic 40.0%
!! TCTTCACTTTGAGATGGCAA+AGG - chr4.2:13504618-13504637 None:intergenic 40.0%
!! TGGTTGATTCTTTTTGCTGC+GGG - chr4.2:13502284-13502303 None:intergenic 40.0%
!!! CCTCAGCTGGGTTTTTTTTT+AGG + chr4.2:13504146-13504165 MS.gene08836:intron 40.0%
AAAAACCCAAGAGGATGCAG+AGG + chr4.2:13506279-13506298 MS.gene08836:CDS 45.0%
AAAACCCAAGAGGATGCAGA+GGG + chr4.2:13506280-13506299 MS.gene08836:CDS 45.0%
AAAAGGAACAGGAACGGGAA+CGG - chr4.2:13502350-13502369 None:intergenic 45.0%
AAGAAGGTTATGGGAGGTCA+GGG + chr4.2:13503465-13503484 MS.gene08836:CDS 45.0%
AAGTTCACCAGCCACTATAG+TGG - chr4.2:13504193-13504212 None:intergenic 45.0%
ACAGATCAACTTGATGCCCT+TGG + chr4.2:13506228-13506247 MS.gene08836:CDS 45.0%
ACATGTGCAACGGAGCTAAT+TGG + chr4.2:13503268-13503287 MS.gene08836:intron 45.0%
ACCTGACTTCCATCCAAAAG+AGG - chr4.2:13506477-13506496 None:intergenic 45.0%
ACTTGAACCGGAACTGAGTA+TGG - chr4.2:13502304-13502323 None:intergenic 45.0%
AGCAGACAAATGACTGTCAG+TGG + chr4.2:13504648-13504667 MS.gene08836:CDS 45.0%
ATCAGCTTCCCGTGCAAATA+TGG - chr4.2:13504323-13504342 None:intergenic 45.0%
ATTGGTGAAGATGCCAGTTC+TGG - chr4.2:13503579-13503598 None:intergenic 45.0%
CAAAACACCAAGCTGCTCTA+AGG - chr4.2:13503811-13503830 None:intergenic 45.0%
CAACGGAGCTAATTGGCTAT+TGG + chr4.2:13503275-13503294 MS.gene08836:intron 45.0%
CCACAAAAAGGAACAGGAAC+GGG - chr4.2:13502355-13502374 None:intergenic 45.0%
CCTATAGTTGACTGAACCAG+GGG - chr4.2:13504351-13504370 None:intergenic 45.0%
CGAATTTATTCCCCACTTGC+CGG + chr4.2:13502553-13502572 MS.gene08836:CDS 45.0%
CTCCTATAGTTGACTGAACC+AGG - chr4.2:13504353-13504372 None:intergenic 45.0%
CTGAAACACCTGGATGTTGT+CGG + chr4.2:13506184-13506203 MS.gene08836:CDS 45.0%
CTGGTTCAGTCAACTATAGG+AGG + chr4.2:13504351-13504370 MS.gene08836:CDS 45.0%
GAAGACAAGAAGGTTATGGG+AGG + chr4.2:13503459-13503478 MS.gene08836:CDS 45.0%
GAAGAGGGTTCCTCTTGAAA+CGG - chr4.2:13502328-13502347 None:intergenic 45.0%
GACTGATCCTTGTTCCGTAA+TGG + chr4.2:13504908-13504927 MS.gene08836:CDS 45.0%
GAGAAATCACCTGAAACACC+TGG + chr4.2:13506174-13506193 MS.gene08836:CDS 45.0%
GATCCTATGGGTGATAGTAC+AGG + chr4.2:13505913-13505932 MS.gene08836:CDS 45.0%
GATCGGGAAGTAGCTGAATT+AGG + chr4.2:13502589-13502608 MS.gene08836:CDS 45.0%
GGCCCATCACAAAAATGAAG+AGG + chr4.2:13504563-13504582 MS.gene08836:CDS 45.0%
GTGTTTATCTGTGCCATCTG+TGG + chr4.2:13503629-13503648 MS.gene08836:CDS 45.0%
TACAGGTACATCTGGTGATC+AGG + chr4.2:13504542-13504561 MS.gene08836:intron 45.0%
TCACACACCATTACGGAACA+AGG - chr4.2:13504918-13504937 None:intergenic 45.0%
TGATCCGAAATTCCCGCAAA+CGG + chr4.2:13502167-13502186 MS.gene08836:CDS 45.0%
TGATTTCTCCCTGTTGGACA+AGG - chr4.2:13506163-13506182 None:intergenic 45.0%
TGGAATTTCTCACCATAGGG+GGG - chr4.2:13506947-13506966 None:intergenic 45.0%
TGTTTCAGATGCTTTCCTGC+AGG - chr4.2:13507208-13507227 None:intergenic 45.0%
TTACCAGACACTGCAACACA+TGG + chr4.2:13505281-13505300 MS.gene08836:CDS 45.0%
TTCAGGTGATTTCTCCCTGT+TGG - chr4.2:13506169-13506188 None:intergenic 45.0%
TTTAGACTCTGAGCTTCAGG+AGG - chr4.2:13505107-13505126 None:intergenic 45.0%
TTTCTGGGTGCTAGAGATGT+TGG + chr4.2:13503696-13503715 MS.gene08836:CDS 45.0%
! AACGACACTCCTCTTTTGGA+TGG + chr4.2:13506465-13506484 MS.gene08836:CDS 45.0%
! ATAGGACCTAAAGGTGTGAC+TGG - chr4.2:13506099-13506118 None:intergenic 45.0%
! CCCCAAACTTCAGAAGCTTT+TGG + chr4.2:13505819-13505838 MS.gene08836:CDS 45.0%
! GATCTGGCTGCAGATTTTCT+GGG + chr4.2:13503681-13503700 MS.gene08836:CDS 45.0%
! GGTTCAAGTTCCGTTTCAAG+AGG + chr4.2:13502315-13502334 MS.gene08836:CDS 45.0%
! TCAGAGTTAGCCTCAACAGA+GGG - chr4.2:13504843-13504862 None:intergenic 45.0%
! TCCTCTTTTGGATGGAAGTC+AGG + chr4.2:13506473-13506492 MS.gene08836:CDS 45.0%
! TCTGAGGTATGCTCTGCATT+TGG - chr4.2:13503899-13503918 None:intergenic 45.0%
! TGTCAACGACACTCCTCTTT+TGG + chr4.2:13506461-13506480 MS.gene08836:CDS 45.0%
! TTCTGGAAAATGGCAGTGTG+AGG + chr4.2:13502629-13502648 MS.gene08836:CDS 45.0%
!! CCGCCTCTTCATTTTTGTGA+TGG - chr4.2:13504569-13504588 None:intergenic 45.0%
!! GGAAAGATGGCAATTTTGGC+TGG - chr4.2:13504755-13504774 None:intergenic 45.0%
!! GTGTTTCTGGTCAGATCCAT+AGG - chr4.2:13503930-13503949 None:intergenic 45.0%
!! GTTGGTAATGCTTTCGACCA+CGG + chr4.2:13503714-13503733 MS.gene08836:CDS 45.0%
!! TCGCCGTTTTCAGCAATTGA+TGG - chr4.2:13502694-13502713 None:intergenic 45.0%
!! TTTTCGGGAACTAACGCCAA+GGG - chr4.2:13506247-13506266 None:intergenic 45.0%
AAAGCCCTCTGCATCCTCTT+GGG - chr4.2:13506287-13506306 None:intergenic 50.0%
AAGGTCTTGGGCAACCTCTT+CGG - chr4.2:13506388-13506407 None:intergenic 50.0%
AATAAATTCGCCTCGCACGG+AGG - chr4.2:13502543-13502562 None:intergenic 50.0%
ACCATAGGGGGGACACTATA+GGG - chr4.2:13506936-13506955 None:intergenic 50.0%
ATACACCTGTGGATGATGCG+AGG + chr4.2:13502713-13502732 MS.gene08836:CDS 50.0%
CAAGAAGGTTATGGGAGGTC+AGG + chr4.2:13503464-13503483 MS.gene08836:CDS 50.0%
CCCCTGGTTCAGTCAACTAT+AGG + chr4.2:13504348-13504367 MS.gene08836:CDS 50.0%
CGACAACATCCAGGTGTTTC+AGG - chr4.2:13506186-13506205 None:intergenic 50.0%
CGATGTGAGGAATGTGGAAG+AGG + chr4.2:13502876-13502895 MS.gene08836:CDS 50.0%
CGTTCCGTTTGCGGGAATTT+CGG - chr4.2:13502174-13502193 None:intergenic 50.0%
CTGAAAATTCAAGCGAGGGC+CGG + chr4.2:13502944-13502963 MS.gene08836:CDS 50.0%
CTTATCTGCACCCTCTGTTG+AGG + chr4.2:13504830-13504849 MS.gene08836:CDS 50.0%
CTTGGCGTTAGTTCCCGAAA+AGG + chr4.2:13506246-13506265 MS.gene08836:CDS 50.0%
GCACCATGGGTGATACCAAT+GGG + chr4.2:13503553-13503572 MS.gene08836:CDS 50.0%
GCTAAGGCTGCTGATCACAA+TGG + chr4.2:13503780-13503799 MS.gene08836:CDS 50.0%
GGAAAATGGCAGTGTGAGGA+CGG + chr4.2:13502633-13502652 MS.gene08836:CDS 50.0%
GGGAATAAATTCGCCTCGCA+CGG - chr4.2:13502546-13502565 None:intergenic 50.0%
GGTTCTCACCGGTGTAGTAT+TGG - chr4.2:13505423-13505442 None:intergenic 50.0%
GGTTGCCCAAGACCTTATGA+AGG + chr4.2:13506392-13506411 MS.gene08836:CDS 50.0%
GTAACCTGGGATGTCTTTGC+AGG + chr4.2:13504289-13504308 MS.gene08836:intron 50.0%
TACACCTGCCTTGTCCAACA+GGG + chr4.2:13506152-13506171 MS.gene08836:CDS 50.0%
TACTTCCCGATCAGAATCGC+CGG - chr4.2:13502581-13502600 None:intergenic 50.0%
TAGAAGCTAGCTGCGATGTG+AGG + chr4.2:13502863-13502882 MS.gene08836:CDS 50.0%
TAGCTGCGATGTGAGGAATG+TGG + chr4.2:13502870-13502889 MS.gene08836:CDS 50.0%
TCGGAGGAGTCTTGGAAAGA+TGG - chr4.2:13504768-13504787 None:intergenic 50.0%
TCTACCTTGTGCTACCACCA+AGG + chr4.2:13502516-13502535 MS.gene08836:CDS 50.0%
TGAAAACGGCGATACACCTG+TGG + chr4.2:13502702-13502721 MS.gene08836:CDS 50.0%
TGAACCTGCAAAGACATCCC+AGG - chr4.2:13504296-13504315 None:intergenic 50.0%
TGATACCAATGGGCCAGAAC+TGG + chr4.2:13503563-13503582 MS.gene08836:CDS 50.0%
TGCACCATGGGTGATACCAA+TGG + chr4.2:13503552-13503571 MS.gene08836:CDS 50.0%
TTCAGGTGAAAGAAGCCTGC+AGG + chr4.2:13507190-13507209 MS.gene08836:intron 50.0%
TTGATCCTCGCATCATCCAC+AGG - chr4.2:13502721-13502740 None:intergenic 50.0%
TTGGCAATTCGGAGGAGTCT+TGG - chr4.2:13504776-13504795 None:intergenic 50.0%
TTTGCTGCGGGAACTTGAAC+CGG - chr4.2:13502272-13502291 None:intergenic 50.0%
! CCCGTTCCTGTTCCTTTTTG+TGG + chr4.2:13502352-13502371 MS.gene08836:CDS 50.0%
! CTCAGAGTTAGCCTCAACAG+AGG - chr4.2:13504844-13504863 None:intergenic 50.0%
! GGATCTGGCTGCAGATTTTC+TGG + chr4.2:13503680-13503699 MS.gene08836:CDS 50.0%
!! AGGTTCTAAATCGCTGCCCA+CGG + chr4.2:13505587-13505606 MS.gene08836:intron 50.0%
!! CTTTTCGGGAACTAACGCCA+AGG - chr4.2:13506248-13506267 None:intergenic 50.0%
!!! CTGCCATTTTCCAGAACCGA+CGG - chr4.2:13502625-13502644 None:intergenic 50.0%
!!! GTTTTATGCTCCGTCGGTTC+TGG + chr4.2:13502612-13502631 MS.gene08836:CDS 50.0%
AACAGGAACGGGAACGGAAG+AGG - chr4.2:13502344-13502363 None:intergenic 55.0%
ACAGGAACGGGAACGGAAGA+GGG - chr4.2:13502343-13502362 None:intergenic 55.0%
AGATCGGACGTTCCGTTTGC+GGG - chr4.2:13502182-13502201 None:intergenic 55.0%
AGCTTTGCTGCGGGTGAATG+TGG - chr4.2:13502221-13502240 None:intergenic 55.0%
CAAAGCCCTCTGCATCCTCT+TGG - chr4.2:13506288-13506307 None:intergenic 55.0%
CACCATAGGGGGGACACTAT+AGG - chr4.2:13506937-13506956 None:intergenic 55.0%
CCACCATGTGTTGCAGTGTC+TGG - chr4.2:13505287-13505306 None:intergenic 55.0%
CCAGACACTGCAACACATGG+TGG + chr4.2:13505284-13505303 MS.gene08836:CDS 55.0%
GACAAGCTCCGACAACATCC+AGG - chr4.2:13506195-13506214 None:intergenic 55.0%
GACACTGCAACACATGGTGG+TGG + chr4.2:13505287-13505306 MS.gene08836:CDS 55.0%
GAGATCGGACGTTCCGTTTG+CGG - chr4.2:13502183-13502202 None:intergenic 55.0%
GGGAAGCTGATCAAAACCCC+TGG + chr4.2:13504332-13504351 MS.gene08836:CDS 55.0%
GTACACCTGCCTTGTCCAAC+AGG + chr4.2:13506151-13506170 MS.gene08836:CDS 55.0%
TCAGCTGCTAGATGCCGAAG+AGG + chr4.2:13506371-13506390 MS.gene08836:CDS 55.0%
TGGCCCATTGGTATCACCCA+TGG - chr4.2:13503559-13503578 None:intergenic 55.0%
TTCTCCCTGTTGGACAAGGC+AGG - chr4.2:13506159-13506178 None:intergenic 55.0%
! AGATGCCAGTTCTGGCCCAT+TGG - chr4.2:13503571-13503590 None:intergenic 55.0%
! AGGTCCTTGGTGGTAGCACA+AGG - chr4.2:13502523-13502542 None:intergenic 55.0%
! GTTGCAGTGTCTGGTAACGC+AGG - chr4.2:13505278-13505297 None:intergenic 55.0%
!! GCTCCGTCGGTTCTGGAAAA+TGG + chr4.2:13502619-13502638 MS.gene08836:CDS 55.0%
!! GGTTCTAAATCGCTGCCCAC+GGG + chr4.2:13505588-13505607 MS.gene08836:intron 55.0%
AAAGCTCACCGTACCCGCTC+CGG + chr4.2:13502235-13502254 MS.gene08836:CDS 60.0%
AATGTGGATGAGGCGGGTGG+CGG - chr4.2:13502205-13502224 None:intergenic 60.0%
CGGGTGAATGTGGATGAGGC+GGG - chr4.2:13502211-13502230 None:intergenic 60.0%
GCCCTATAGTGTCCCCCCTA+TGG + chr4.2:13506932-13506951 MS.gene08836:intron 60.0%
GCGGGTGAATGTGGATGAGG+CGG - chr4.2:13502212-13502231 None:intergenic 60.0%
GCTGCGGGTGAATGTGGATG+AGG - chr4.2:13502215-13502234 None:intergenic 60.0%
GGCTGTGCCTTAGAGCAGCT+TGG + chr4.2:13503801-13503820 MS.gene08836:CDS 60.0%
GGGTACGGTGAGCTTTGCTG+CGG - chr4.2:13502231-13502250 None:intergenic 60.0%
GGTACGGTGAGCTTTGCTGC+GGG - chr4.2:13502230-13502249 None:intergenic 60.0%
GTGAATGTGGATGAGGCGGG+TGG - chr4.2:13502208-13502227 None:intergenic 60.0%
TGAACCGGACCGGATCTGAC+CGG - chr4.2:13502257-13502276 None:intergenic 60.0%
TGCGGGAACTTGAACCGGAC+CGG - chr4.2:13502267-13502286 None:intergenic 60.0%
GGATCTGACCGGAGCGGGTA+CGG - chr4.2:13502246-13502265 None:intergenic 65.0%
GTACCCGCTCCGGTCAGATC+CGG + chr4.2:13502245-13502264 MS.gene08836:CDS 65.0%
TATTCCCCACTTGCCGGCGC+CGG + chr4.2:13502559-13502578 MS.gene08836:CDS 65.0%
!! ATGAGGCGGGTGGCGGAGAT+CGG - chr4.2:13502198-13502217 None:intergenic 65.0%
CCACCAAGGACCTCCGTGCG+AGG + chr4.2:13502530-13502549 MS.gene08836:CDS 70.0%
CCGATCAGAATCGCCGGCGC+CGG - chr4.2:13502575-13502594 None:intergenic 70.0%
CCTCGCACGGAGGTCCTTGG+TGG - chr4.2:13502533-13502552 None:intergenic 70.0%
CGCTCCGGTCAGATCCGGTC+CGG + chr4.2:13502250-13502269 MS.gene08836:CDS 70.0%
CGGACCGGATCTGACCGGAG+CGG - chr4.2:13502252-13502271 None:intergenic 70.0%
GGACCGGATCTGACCGGAGC+GGG - chr4.2:13502251-13502270 None:intergenic 70.0%
TCGCCTCGCACGGAGGTCCT+TGG - chr4.2:13502536-13502555 None:intergenic 70.0%
!! AATCGCCGGCGCCGGCAAGT+GGG - chr4.2:13502567-13502586 None:intergenic 70.0%
!! CCGGCGCCGGCGATTCTGAT+CGG + chr4.2:13502572-13502591 MS.gene08836:CDS 70.0%
!! CGGCGCCGGCGATTCTGATC+GGG + chr4.2:13502573-13502592 MS.gene08836:CDS 70.0%
!! ATCGCCGGCGCCGGCAAGTG+GGG - chr4.2:13502566-13502585 None:intergenic 75.0%
!! GAATCGCCGGCGCCGGCAAG+TGG - chr4.2:13502568-13502587 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 13502160 13507448 13502160 ID=MS.gene08836
chr4.2 mRNA 13502160 13507448 13502160 ID=MS.gene08836.t1;Parent=MS.gene08836
chr4.2 exon 13502160 13502996 13502160 ID=MS.gene08836.t1.exon1;Parent=MS.gene08836.t1
chr4.2 CDS 13502160 13502996 13502160 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13503108 13503198 13503108 ID=MS.gene08836.t1.exon2;Parent=MS.gene08836.t1
chr4.2 CDS 13503108 13503198 13503108 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13503433 13504019 13503433 ID=MS.gene08836.t1.exon3;Parent=MS.gene08836.t1
chr4.2 CDS 13503433 13504019 13503433 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13504311 13504413 13504311 ID=MS.gene08836.t1.exon4;Parent=MS.gene08836.t1
chr4.2 CDS 13504311 13504413 13504311 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13504547 13505433 13504547 ID=MS.gene08836.t1.exon5;Parent=MS.gene08836.t1
chr4.2 CDS 13504547 13505433 13504547 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13505589 13505691 13505589 ID=MS.gene08836.t1.exon6;Parent=MS.gene08836.t1
chr4.2 CDS 13505589 13505691 13505589 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13505797 13506494 13505797 ID=MS.gene08836.t1.exon7;Parent=MS.gene08836.t1
chr4.2 CDS 13505797 13506494 13505797 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13507195 13507293 13507195 ID=MS.gene08836.t1.exon8;Parent=MS.gene08836.t1
chr4.2 CDS 13507195 13507293 13507195 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
chr4.2 exon 13507368 13507448 13507368 ID=MS.gene08836.t1.exon9;Parent=MS.gene08836.t1
chr4.2 CDS 13507368 13507448 13507368 ID=cds.MS.gene08836.t1;Parent=MS.gene08836.t1
Gene Sequence

>MS.gene08836

ATGGACGTGATCCGAAATTCCCGCAAACGGAACGTCCGATCTCCGCCACCCGCCTCATCCACATTCACCCGCAGCAAAGCTCACCGTACCCGCTCCGGTCAGATCCGGTCCGGTTCAAGTTCCCGCAGCAAAAAGAATCAACCATACTCAGTTCCGGTTCAAGTTCCGTTTCAAGAGGAACCCTCTTCCGTTCCCGTTCCTGTTCCTTTTTGTGGAAACGATGTAACCAAAGGACTTTCAGATTCGGAATTCAAGAATCTAATTCATGATATTTGCAATGAATATTGTGAATCAGATTCCGAAGATGACGATCTTGTTAAGGATCCTTTCAAGAAAGCAAAACGTGTTGATGCTAATCTACCTTGTGCTACCACCAAGGACCTCCGTGCGAGGCGAATTTATTCCCCACTTGCCGGCGCCGGCGATTCTGATCGGGAAGTAGCTGAATTAGGGTTTTATGCTCCGTCGGTTCTGGAAAATGGCAGTGTGAGGACGGAATCAGCTGAAATTTCTGAATTAGGGTTTGGATCGCCATCAATTGCTGAAAACGGCGATACACCTGTGGATGATGCGAGGATCAAATCTAATAAGATTCTCGACGAGCCTCTGAATTTTGATAGGGGAATCACCAAGCTGTCAGATGAAGATTTGGGCGAAGAATCATTACAAACGACACCACCTAATGATGTCATCTATGTAGGTTTAGAAGCTAGCTGCGATGTGAGGAATGTGGAAGAGGCAGACACACTTGTTGTCAAAGATATGTCTCCTGCTGCTAATGTAGCTGAAAATTCAAGCGAGGGCCGGAAAAATAGCTCTGTTCAAAGGAGTAAATCTGTAAGGCCTTTCAATTTTTATTTTCATCATTGCATATGTGTTGGTTAATAATTTTTGTACAAATTACTTTTTTATATGAAATTTTGTTAGTTGATTGGATTCTTGATGCAGGTACTCAAACCGCGTTTACCTTTGAAATTGTTCAAAGCCCCAGGTTCATTCAATTACAAAAGGCTAATGGATGCTATGGGAGATAATTTCGGTAATTGTGTTATGCATAAAGTCCTTTATTATTTAGTTGTTTGCATAGTGTAGATCATGATTTAGTTTTACATGTGCAACGGAGCTAATTGGCTATTGGATACTATTGTACGTGATTTTGGTAGTTGTTCTATGTAGAGGATCCTTTGTTATTTATTGATTGAATAGTGTAGAATGTAGATGATGAATTAGCTTGATATGTGCGATGGAACTAATTGGCATCGTAATTTTATAGGAATACCGAAATTGGGTCATTGTCATGAAGACAAGAAGGTTATGGGAGGTCAGGGATTGAAACTTCCTTTGACATCTGATAATCATGAAGGTTCTAAGCCTGAAACTAAGATTGATAGTTGCACCATGGGTGATACCAATGGGCCAGAACTGGCATCTTCACCAATGCAAGTAGATACTGAGAAAGTGAATGGCGAGTGTTTATCTGTGCCATCTGTGGATGATAAATGCTTGAGTGAATCAAAAGTGGATCTGGCTGCAGATTTTCTGGGTGCTAGAGATGTTGGTAATGCTTTCGACCACGGTGATGTTAAGCAAGATTCTTTCAACAGGAATAATCTTGACTGTGCTAAGGCTGCTGATCACAATGGCTGTGCCTTAGAGCAGCTTGGTGTTTTGAATGAAGATTGTATACCAATGACTCGTGATACTGAAATATGTGATGATATTGTGCTCAATGGAGACCAAATGCAGAGCATACCTCAGAATGTCAAACCTATGGATCTGACCAGAAACACTCAAGAAAGCACTGTTGAAGCGTTATACCCCAAAGCCCATAAGAGAAATAATCCACTCAAGAGCAAACATGTAAGAATCTGTCATGTTTTTAAATATTTGTTTTCTGCCAGTTATGGGTTAGACATTTTGTTGCTGATCTTTACTAAATTATAGATATACTACCTAATACCTAATACAATGTCAATTTGGTTAAACCCTCAGCTGGGTTTTTTTTTAGGGTTGTTGATATGTTTAAACTTCCACTATAGTGGCTGGTGAACTTGCTAACTTCTTCTGTGTTTAATTTTGACAATATATGCATATACATGGTTTTGTATTTGTTGGCAATTATATATCATGTAACCTGGGATGTCTTTGCAGGTTCATAAACCATATTTGCACGGGAAGCTGATCAAAACCCCTGGTTCAGTCAACTATAGGAGGTTGCTTCCATATTTTAAGAATCTTCCCAAAGATGACTATGGTAATGTAACCACCACGTTTTCAACCACTTATGCAATACAATATTAATTATATATATATATATATATATATATATATATATATATATATATATATAATATTATGGACACTGAAAGTGCTTGCTGATTTTACAGGTACATCTGGTGATCAGGCCCATCACAAAAATGAAGAGGCGGATTTATATGCAAAGGAGTTCCAACTTCCTTTGCCATCTCAAAGTGAAGAAGCTTCTATTAGCAGACAAATGACTGTCAGTGGCTCTATCCATGACAAAGTTGACTTGAATACTTTGGAAAACAACATCTCAGTCAATCCTGCTAATATGTCATCTCATGGCTACCAGCCAAAATTGCCATCTTTCCAAGACTCCTCCGAATTGCCAATACAATTTGACGCAAAAGAAATGGCACATGAGTGCTTATCTGCACCCTCTGTTGAGGCTAACTCTGAGAAAACTGTCATCAGTTCTAAAGATGAATGCTTGAGTGAATCAGCGACTGATCCTTGTTCCGTAATGGTGTGTGATAAGATTGTCACAAATGGTGGGTCACCACCCAAAGAACAAAATTTGCTTAATGTCAATAATGATATCTCCAACCTTTCATTTGAGCATCATTCAAGCAATGAGAAAGGATTCACTGAAAGAAAGCAGTTTGTGAGTCTGGAGAAGCATGAATCTGTTAGCAGATGTCCTCCTGAAGCTCAGAGTCTAAATCAATTGGATCCTAATATGTTAGATGCTGAAGAGAATGAAACAAGCAGCCATGCAATTTGCAAAAATGACGATGTTGTGGTTTTATGTCACGTCACCATCTCAAATGAAGAATCTAGTTCACAATCAGAGAAGATTATTTCTGAAAAACCTGCGTTACCAGACACTGCAACACATGGTGGTGGCAAAGAAAAAAGTCTTCTGAATGGCCTAGTTAATGGTTCAAAGATGCCTTCAAAAGGAAGCAATAACAAAAAGGCTAGTTTTGCTGGTGAGATGAAAAATGGTTTGGAATCCAATACTACACCGGTGAGAACCATAATCTTTTGTGTATATATCTCCAAAAGACCTGCATACTTTTAAGATTTACCCCTCTCTTTCTCATTGATTATAATGATACGTTTTTCTTTTATGTTGATTTTTTTCTTTCTTGAAAATATATTTGATCAAGTAATTTTGAACAGGTTCTAAATCGCTGCCCACGGGTTAAGTTTTTAAAACATGCTGGGTCTTTGAACTACAAAAGATTGCTTCCGATTTTGTTGGAAAATGAGAAGTCTAATTCCTGTAAGTATTGGTTTTTATTCTATTGGAAGATATCACTCAATTTTATAATTTTATTTTTCATTTTTTTGATTGCGTTTTTTAAAACTAAACTTATACTACTTTTAGGTGCTTCGAATAATGATCATCGCCCCAAACTTCAGAAGCTTTTGGATCACACACCACTTCTGCCAATTTCAGATTCAAACTTGCAAGTAACTCCTGGAAGTGATTCAAATGATTGTGATCCTATGGGTGATAGTACAGGAAATTCTGGTGCTCAGCAAGAAACAGAGTTGCAAGCTTGTGACTTAAATAGTGATAGTTTAAGCCCAAGATCTCAACTACAAGATAAACAGATTGTGTCAAATAGACCCTACTATCTCGAGAACTCCTTTGTTTCACCAATTTCTGTTCATAGAGATTTACCAGTCACACCTTTAGGTCCTATAGCTGATCAAGTTGTCACTAGAGAAGAAGTGGGTACACCTGCCTTGTCCAACAGGGAGAAATCACCTGAAACACCTGGATGTTGTCGGAGCTTGTCCGAAATGAAAGTCACAGATCAACTTGATGCCCTTGGCGTTAGTTCCCGAAAAGGAATTTTGAGAAAAAACCCAAGAGGATGCAGAGGGCTTTGCACATGTTTGAACTGTGTTTCTTTTCGCCTTCATGCAGAAAGAGCATTTGAATTTTCTAGAAATCAGCTGCTAGATGCCGAAGAGGTTGCCCAAGACCTTATGAAGGAAGTATCCCATCTCAGAAACATGTTGTTAGAAAGATGTACTGATAATGTCAACGACACTCCTCTTTTGGATGGAAGTCAGGTGAGTGCCACATGATGTTGATATGACTATTACACTAACATTCGTTTTCCTTTCTTTTCTGATCATTTTATCATTCTTCACGATAATAACTGAAATGGCTACATTTCTTTTTATCTGCTAGCAATGCATCTTATTATGCAAAGCTTGTGATGGCTCTCAGTTTAATAATTATCTCATCCGATAAGTTTGGTTATTTAAATACTCGTCTCCTTGCAATTCCTTTCACTATTATTTCATTTCACAAATTGTCTATTTTTCTCTCTTATGATAAAAAAATAAATGAGCTAGATCTTATCAAATATTGTGAAAAATTATCAAGAGAGATTGATATAAATTTATTTTCTCAGGTGTAATATTAACACTAGAGCTTTCATTTCCGACAAGTTTATAATATTTTGCTTATAACCATTTAGAAATAAAACCTCAAGTAAATTCTGGCCCTATAGTGTCCCCCCTATGGTGAGAAATTCCAAGTAACTTTGCCATTTTTTTAGTGCATTTGACCTTATGAGATAGCTTCATTTGACTGTTTTTCTACTGTTCATAAGATTTTCTAGACTTAGTCTAGTTCATCACCCGTGTAACTTAATAAATTCAGCCATTATCAACGTCTTTATATGCAAAATAGTGATAATGTAGCATAAAAATAAGAGGAAAATACTAATCAAACTAAGTCATTTTTTTATTTGAATATTTTCAGGTGAAAGAAGCCTGCAGGAAAGCATCTGAAACAGAACAACTTGCAAAGGATCGACTTAGCCAGATGAATGATGATCTTAACATACATTGCAGAACACCTGTATGTGCATACCTTATTCCCAAAATTTGTTCCTCCAAATAAACAATTTGTTTATTTTAGCTTGTTTTGTGCAGAGTCTGCAGCGACCAAGTGTTAAGTTTTCAGATCGTGTTGAGGAAAAGGTCATTCAACCAAACAGATTAAAAAATGGTTAA
Protein sequence

>MS.gene08836.t1

MDVIRNSRKRNVRSPPPASSTFTRSKAHRTRSGQIRSGSSSRSKKNQPYSVPVQVPFQEEPSSVPVPVPFCGNDVTKGLSDSEFKNLIHDICNEYCESDSEDDDLVKDPFKKAKRVDANLPCATTKDLRARRIYSPLAGAGDSDREVAELGFYAPSVLENGSVRTESAEISELGFGSPSIAENGDTPVDDARIKSNKILDEPLNFDRGITKLSDEDLGEESLQTTPPNDVIYVGLEASCDVRNVEEADTLVVKDMSPAANVAENSSEGRKNSSVQRSKSVLKPRLPLKLFKAPGSFNYKRLMDAMGDNFGIPKLGHCHEDKKVMGGQGLKLPLTSDNHEGSKPETKIDSCTMGDTNGPELASSPMQVDTEKVNGECLSVPSVDDKCLSESKVDLAADFLGARDVGNAFDHGDVKQDSFNRNNLDCAKAADHNGCALEQLGVLNEDCIPMTRDTEICDDIVLNGDQMQSIPQNVKPMDLTRNTQESTVEALYPKAHKRNNPLKSKHVHKPYLHGKLIKTPGSVNYRRLLPYFKNLPKDDYGTSGDQAHHKNEEADLYAKEFQLPLPSQSEEASISRQMTVSGSIHDKVDLNTLENNISVNPANMSSHGYQPKLPSFQDSSELPIQFDAKEMAHECLSAPSVEANSEKTVISSKDECLSESATDPCSVMVCDKIVTNGGSPPKEQNLLNVNNDISNLSFEHHSSNEKGFTERKQFVSLEKHESVSRCPPEAQSLNQLDPNMLDAEENETSSHAICKNDDVVVLCHVTISNEESSSQSEKIISEKPALPDTATHGGGKEKSLLNGLVNGSKMPSKGSNNKKASFAGEMKNGLESNTTPVLNRCPRVKFLKHAGSLNYKRLLPILLENEKSNSCASNNDHRPKLQKLLDHTPLLPISDSNLQVTPGSDSNDCDPMGDSTGNSGAQQETELQACDLNSDSLSPRSQLQDKQIVSNRPYYLENSFVSPISVHRDLPVTPLGPIADQVVTREEVGTPALSNREKSPETPGCCRSLSEMKVTDQLDALGVSSRKGILRKNPRGCRGLCTCLNCVSFRLHAERAFEFSRNQLLDAEEVAQDLMKEVSHLRNMLLERCTDNVNDTPLLDGSQVKEACRKASETEQLAKDRLSQMNDDLNIHCRTPSLQRPSVKFSDRVEEKVIQPNRLKNG