Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09258.t1 | XP_003629630.2 | 85.8 | 1165 | 158 | 3 | 1 | 1157 | 1 | 1165 | 0.00E+00 | 1835.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09258.t1 | G7LH47 | 85.8 | 1165 | 158 | 3 | 1 | 1157 | 1 | 1165 | 0.0e+00 | 1835.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene09258 | 0.846589 | 1.98E-59 | -1.69E-46 |
MS.gene049622 | MS.gene09258 | 0.832978 | 6.94E-56 | -1.69E-46 |
MS.gene049660 | MS.gene09258 | 0.833527 | 5.07E-56 | -1.69E-46 |
MS.gene049989 | MS.gene09258 | 0.89055 | 8.91E-74 | -1.69E-46 |
MS.gene050297 | MS.gene09258 | 0.875197 | 3.72E-68 | -1.69E-46 |
MS.gene05054 | MS.gene09258 | 0.838543 | 2.70E-57 | -1.69E-46 |
MS.gene050648 | MS.gene09258 | 0.802555 | 5.31E-49 | -1.69E-46 |
MS.gene051094 | MS.gene09258 | 0.831139 | 1.98E-55 | -1.69E-46 |
MS.gene05124 | MS.gene09258 | 0.817193 | 3.74E-52 | -1.69E-46 |
MS.gene051263 | MS.gene09258 | 0.818537 | 1.86E-52 | -1.69E-46 |
MS.gene051629 | MS.gene09258 | 0.85616 | 3.88E-62 | -1.69E-46 |
MS.gene051742 | MS.gene09258 | 0.816506 | 5.34E-52 | -1.69E-46 |
MS.gene051816 | MS.gene09258 | 0.86703 | 1.85E-65 | -1.69E-46 |
MS.gene051955 | MS.gene09258 | 0.869905 | 2.18E-66 | -1.69E-46 |
MS.gene052143 | MS.gene09258 | 0.806998 | 6.27E-50 | -1.69E-46 |
MS.gene052308 | MS.gene09258 | 0.836598 | 8.52E-57 | -1.69E-46 |
MS.gene052367 | MS.gene09258 | 0.870145 | 1.82E-66 | -1.69E-46 |
MS.gene053173 | MS.gene09258 | 0.835131 | 2.01E-56 | -1.69E-46 |
MS.gene053348 | MS.gene09258 | 0.875517 | 2.90E-68 | -1.69E-46 |
MS.gene053416 | MS.gene09258 | 0.865326 | 6.41E-65 | -1.69E-46 |
MS.gene053417 | MS.gene09258 | 0.862057 | 6.63E-64 | -1.69E-46 |
MS.gene05369 | MS.gene09258 | 0.850309 | 1.85E-60 | -1.69E-46 |
MS.gene053929 | MS.gene09258 | 0.829784 | 4.24E-55 | -1.69E-46 |
MS.gene054551 | MS.gene09258 | 0.848799 | 4.87E-60 | -1.69E-46 |
MS.gene054552 | MS.gene09258 | 0.815067 | 1.12E-51 | -1.69E-46 |
MS.gene054593 | MS.gene09258 | 0.843943 | 1.03E-58 | -1.69E-46 |
MS.gene054885 | MS.gene09258 | 0.827612 | 1.42E-54 | -1.69E-46 |
MS.gene055308 | MS.gene09258 | 0.863517 | 2.35E-64 | -1.69E-46 |
MS.gene055411 | MS.gene09258 | 0.82661 | 2.47E-54 | -1.69E-46 |
MS.gene055578 | MS.gene09258 | 0.886388 | 3.57E-72 | -1.69E-46 |
MS.gene055579 | MS.gene09258 | 0.846426 | 2.19E-59 | -1.69E-46 |
MS.gene055957 | MS.gene09258 | 0.889003 | 3.57E-73 | -1.69E-46 |
MS.gene056041 | MS.gene09258 | 0.915123 | 8.55E-85 | -1.69E-46 |
MS.gene056042 | MS.gene09258 | 0.866835 | 2.13E-65 | -1.69E-46 |
MS.gene056335 | MS.gene09258 | 0.822913 | 1.84E-53 | -1.69E-46 |
MS.gene05640 | MS.gene09258 | 0.862472 | 4.95E-64 | -1.69E-46 |
MS.gene056526 | MS.gene09258 | 0.863734 | 2.01E-64 | -1.69E-46 |
MS.gene056528 | MS.gene09258 | 0.833517 | 5.10E-56 | -1.69E-46 |
MS.gene057358 | MS.gene09258 | 0.808865 | 2.51E-50 | -1.69E-46 |
MS.gene057458 | MS.gene09258 | 0.861555 | 9.45E-64 | -1.69E-46 |
MS.gene058128 | MS.gene09258 | 0.816648 | 4.96E-52 | -1.69E-46 |
MS.gene058196 | MS.gene09258 | 0.881045 | 3.33E-70 | -1.69E-46 |
MS.gene058197 | MS.gene09258 | 0.854788 | 9.75E-62 | -1.69E-46 |
MS.gene058198 | MS.gene09258 | 0.856525 | 3.03E-62 | -1.69E-46 |
MS.gene058478 | MS.gene09258 | 0.81176 | 5.96E-51 | -1.69E-46 |
MS.gene058818 | MS.gene09258 | 0.820985 | 5.14E-53 | -1.69E-46 |
MS.gene058827 | MS.gene09258 | 0.841763 | 3.90E-58 | -1.69E-46 |
MS.gene058828 | MS.gene09258 | 0.816035 | 6.81E-52 | -1.69E-46 |
MS.gene058853 | MS.gene09258 | 0.841481 | 4.63E-58 | -1.69E-46 |
MS.gene059300 | MS.gene09258 | 0.869613 | 2.72E-66 | -1.69E-46 |
MS.gene059553 | MS.gene09258 | 0.862518 | 4.79E-64 | -1.69E-46 |
MS.gene060473 | MS.gene09258 | 0.922414 | 1.01E-88 | -1.69E-46 |
MS.gene060565 | MS.gene09258 | 0.922612 | 7.84E-89 | -1.69E-46 |
MS.gene06057 | MS.gene09258 | 0.848204 | 7.12E-60 | -1.69E-46 |
MS.gene06064 | MS.gene09258 | 0.80443 | 2.17E-49 | -1.69E-46 |
MS.gene06093 | MS.gene09258 | 0.863581 | 2.25E-64 | -1.69E-46 |
MS.gene061099 | MS.gene09258 | 0.871484 | 6.60E-67 | -1.69E-46 |
MS.gene061260 | MS.gene09258 | 0.910833 | 1.20E-82 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09258.t1 | MTR_8g083310 | 90.488 | 1167 | 99 | 4 | 1 | 1157 | 1 | 1165 | 0.0 | 2093 |
MS.gene09258.t1 | MTR_8g081060 | 58.462 | 65 | 7 | 1 | 361 | 425 | 227 | 271 | 6.29e-13 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene09258.t1 | AT3G23740 | 33.528 | 343 | 181 | 9 | 842 | 1158 | 240 | 561 | 3.00e-37 | 149 |
Find 250 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGCTGAAATTTCTGAATT+AGG | 0.116328 | 4.1:+14652144 | MS.gene09258:CDS |
TCTTGGAAAGATGGCAATTT+TGG | 0.194696 | 4.1:-14654252 | None:intergenic |
AGTGCTTTCTTGAGTGTTTC+TGG | 0.194856 | 4.1:-14653426 | None:intergenic |
TTATTTCTCTCATGGGCTTT+GGG | 0.201039 | 4.1:-14653464 | None:intergenic |
GATCGGGAAGTAGCTGAATT+AGG | 0.204752 | 4.1:+14652075 | MS.gene09258:CDS |
TTGGGAAGATTCTTAAAATA+TGG | 0.218302 | 4.1:-14653865 | None:intergenic |
CGACAACATCCAGGTGTTTC+AGG | 0.234770 | 4.1:-14655683 | None:intergenic |
ATCCAAAAGCTTCTGAAGTT+TGG | 0.240513 | 4.1:-14655321 | None:intergenic |
CTTCTGAATGGCCTAGTTAA+TGG | 0.242037 | 4.1:+14654819 | MS.gene09258:CDS |
CAGCTGAAATTTCTGAATTA+GGG | 0.242152 | 4.1:+14652145 | MS.gene09258:CDS |
GTTACATCGTTTCCACAAAA+AGG | 0.243243 | 4.1:-14651850 | None:intergenic |
CCCCAAACTTCAGAAGCTTT+TGG | 0.244143 | 4.1:+14655319 | MS.gene09258:CDS |
TCTTCAGCATCTAACATATT+AGG | 0.253871 | 4.1:-14654633 | None:intergenic |
ATCAGCTTCCCGTGCAAATA+TGG | 0.256177 | 4.1:-14653805 | None:intergenic |
TGTCAACGACACTCCTCTTT+TGG | 0.257812 | 4.1:+14655961 | MS.gene09258:CDS |
CAACTATCAATCTTAGTTTC+AGG | 0.258328 | 4.1:-14653017 | None:intergenic |
TGCAAGTTTGAATCTGAAAT+TGG | 0.260828 | 4.1:-14655359 | None:intergenic |
ATTATTTCTCTCATGGGCTT+TGG | 0.273531 | 4.1:-14653465 | None:intergenic |
GCTCCGTCGGTTCTGGAAAA+TGG | 0.277936 | 4.1:+14652105 | MS.gene09258:CDS |
AAATCTCTATGAACAGAAAT+TGG | 0.285206 | 4.1:-14655572 | None:intergenic |
GATTTACCAGTCACACCTTT+AGG | 0.298769 | 4.1:+14655590 | MS.gene09258:CDS |
TCCAAAAGCTTCTGAAGTTT+GGG | 0.301497 | 4.1:-14655320 | None:intergenic |
TGATTTAGACTCTGAGCTTC+AGG | 0.305858 | 4.1:-14654603 | None:intergenic |
CGTTCCGTTTGCGGGAATTT+CGG | 0.308084 | 4.1:-14651657 | None:intergenic |
GTGGTTACCATAGTCATCTT+TGG | 0.316172 | 4.1:-14653884 | None:intergenic |
CAAGCTGTCAGATGAAGATT+TGG | 0.331421 | 4.1:+14652275 | MS.gene09258:CDS |
TTATCTTGTAGTTGAGATCT+TGG | 0.337870 | 4.1:-14655500 | None:intergenic |
AGATCGGACGTTCCGTTTGC+GGG | 0.338738 | 4.1:-14651665 | None:intergenic |
TTGATCTGTGACTTTCATTT+CGG | 0.339926 | 4.1:-14655714 | None:intergenic |
CAAAGCCCTCTGCATCCTCT+TGG | 0.342184 | 4.1:-14655785 | None:intergenic |
GTCAAATTGTATTGGCAATT+CGG | 0.344690 | 4.1:-14654280 | None:intergenic |
CAATCATTTGAATCACTTCC+AGG | 0.354354 | 4.1:-14655389 | None:intergenic |
GAAATTTCTGAATTAGGGTT+TGG | 0.356119 | 4.1:+14652150 | MS.gene09258:CDS |
GGTGATAGTACAGGAAATTC+TGG | 0.363890 | 4.1:+14655422 | MS.gene09258:CDS |
AAAAGGAAGCAATAACAAAA+AGG | 0.364259 | 4.1:+14654857 | MS.gene09258:CDS |
CGAATTTATTCCCCACTTGC+CGG | 0.365212 | 4.1:+14652039 | MS.gene09258:CDS |
TCTGAGGTATGCTCTGCATT+TGG | 0.369214 | 4.1:-14653382 | None:intergenic |
TCATGACAATGACCCAATTT+CGG | 0.374046 | 4.1:-14652924 | None:intergenic |
TCATGAAGACAAGAAGGTTA+TGG | 0.374927 | 4.1:+14652941 | MS.gene09258:CDS |
ATTCAATTACAAAAGGCTAA+TGG | 0.376627 | 4.1:+14652641 | MS.gene09258:CDS |
TTTGCTGCGGGAACTTGAAC+CGG | 0.379639 | 4.1:-14651755 | None:intergenic |
CAAGAAGGTTATGGGAGGTC+AGG | 0.382245 | 4.1:+14652950 | MS.gene09258:CDS |
ATCGGGAAGTAGCTGAATTA+GGG | 0.382557 | 4.1:+14652076 | MS.gene09258:CDS |
TCTTGAAACGGAACTTGAAC+CGG | 0.382730 | 4.1:-14651799 | None:intergenic |
TTCCGAATCTGAAAGTCCTT+TGG | 0.386134 | 4.1:-14651872 | None:intergenic |
AAGAAAGCAGTTTGTGAGTC+TGG | 0.393914 | 4.1:+14654551 | MS.gene09258:CDS |
TTCAGATCGTGTTGAGGAAA+AGG | 0.395076 | 4.1:+14656903 | MS.gene09258:CDS |
ACTTGAACCGGAACTGAGTA+TGG | 0.396740 | 4.1:-14651787 | None:intergenic |
CAAAGTTGACTTGAATACTT+TGG | 0.397446 | 4.1:+14654179 | MS.gene09258:CDS |
TTCAGGTGATTTCTCCCTGT+TGG | 0.398168 | 4.1:-14655666 | None:intergenic |
TATCTTGTAGTTGAGATCTT+GGG | 0.399426 | 4.1:-14655499 | None:intergenic |
AGCTCAGAGTCTAAATCAAT+TGG | 0.402575 | 4.1:+14654608 | MS.gene09258:CDS |
CAAAACACCAAGCTGCTCTA+AGG | 0.402756 | 4.1:-14653294 | None:intergenic |
CATGAAGACAAGAAGGTTAT+GGG | 0.402943 | 4.1:+14652942 | MS.gene09258:CDS |
GTACACCTGCCTTGTCCAAC+AGG | 0.404686 | 4.1:+14655651 | MS.gene09258:CDS |
ATACTTCCTTCATAAGGTCT+TGG | 0.405275 | 4.1:-14655898 | None:intergenic |
TGAGTGGATTATTTCTCTCA+TGG | 0.406884 | 4.1:-14653472 | None:intergenic |
TTTATAGGAATACCGAAATT+GGG | 0.406959 | 4.1:+14652912 | MS.gene09258:intron |
TACAGGTACATCTGGTGATC+AGG | 0.410151 | 4.1:+14654038 | MS.gene09258:intron |
AAAGCCCTCTGCATCCTCTT+GGG | 0.411441 | 4.1:-14655784 | None:intergenic |
CGAAGATGACGATCTTGTTA+AGG | 0.411660 | 4.1:+14651945 | MS.gene09258:CDS |
TTAAGCAAGATTCTTTCAAC+AGG | 0.411745 | 4.1:+14653228 | MS.gene09258:CDS |
AAAGGAGTTCTCGAGATAGT+AGG | 0.415123 | 4.1:-14655543 | None:intergenic |
CAAAAGGCTAATGGATGCTA+TGG | 0.417412 | 4.1:+14652650 | MS.gene09258:CDS |
CTCCTATAGTTGACTGAACC+AGG | 0.418077 | 4.1:-14653835 | None:intergenic |
CCTACACAGATGACATCATT+AGG | 0.419553 | 4.1:-14652324 | None:intergenic |
GAGTGAATCAAAGGTGGATC+TGG | 0.420859 | 4.1:+14653151 | MS.gene09258:CDS |
TGTTTCAGATGCTTTCCTGC+AGG | 0.422230 | 4.1:-14656714 | None:intergenic |
TGGTTACCATAGTCATCTTT+GGG | 0.422943 | 4.1:-14653883 | None:intergenic |
TACTTCCTTCATAAGGTCTT+GGG | 0.428201 | 4.1:-14655897 | None:intergenic |
GATGCTATGGGAGATAATTT+CGG | 0.429372 | 4.1:+14652663 | MS.gene09258:CDS |
ACAATTTGACGCAAAAGAAA+TGG | 0.430175 | 4.1:+14654293 | MS.gene09258:CDS |
AATCTTCCCAAAGATGACTA+TGG | 0.436351 | 4.1:+14653877 | MS.gene09258:CDS |
CCACCATGTGTTGCAGTGTC+TGG | 0.438116 | 4.1:-14654780 | None:intergenic |
GTGTTTCTGGTCAGATCCAT+AGG | 0.442538 | 4.1:-14653413 | None:intergenic |
TGTTAAGATCATCATTCATC+TGG | 0.443214 | 4.1:-14656763 | None:intergenic |
ATTTCAGTATCACGAGTCAT+TGG | 0.444093 | 4.1:-14653332 | None:intergenic |
TTCAAATGATTGTGATCCTA+TGG | 0.444913 | 4.1:+14655400 | MS.gene09258:CDS |
TGATACCAATGGGCCAGAAC+TGG | 0.447913 | 4.1:+14653049 | MS.gene09258:CDS |
ATGAGGCGGGTGGCGGAGAT+CGG | 0.451393 | 4.1:-14651681 | None:intergenic |
TTCTCCCTGTTGGACAAGGC+AGG | 0.452781 | 4.1:-14655656 | None:intergenic |
GAATCAACCATACTCAGTTC+CGG | 0.453096 | 4.1:+14651780 | MS.gene09258:CDS |
CCGGCGCCGGCGATTCTGAT+CGG | 0.453266 | 4.1:+14652058 | MS.gene09258:CDS |
AAGGTCTTGGGCAACCTCTT+CGG | 0.453280 | 4.1:-14655885 | None:intergenic |
ATTGGTGAAGATGCCAGTTC+TGG | 0.453428 | 4.1:-14653062 | None:intergenic |
AATGTGGATGAGGCGGGTGG+CGG | 0.453864 | 4.1:-14651688 | None:intergenic |
GGTTCTCACCGGTGTAGTAT+TGG | 0.455125 | 4.1:-14654916 | None:intergenic |
TATTCCCCACTTGCCGGCGC+CGG | 0.457589 | 4.1:+14652045 | MS.gene09258:CDS |
CGGCGCCGGCGATTCTGATC+GGG | 0.457703 | 4.1:+14652059 | MS.gene09258:CDS |
TCGCCTCGCACGGAGGTCCT+TGG | 0.459092 | 4.1:-14652019 | None:intergenic |
TTGGCAATTCGGAGGAGTCT+TGG | 0.461511 | 4.1:-14654269 | None:intergenic |
CTAACAACATGTTTCTGAGA+TGG | 0.462834 | 4.1:-14655922 | None:intergenic |
GTGACAACTTGATCAGCTAT+AGG | 0.464581 | 4.1:-14655614 | None:intergenic |
TTTGAGATGGCAAAGGAAGT+TGG | 0.468342 | 4.1:-14654104 | None:intergenic |
CAAATGCTCTTTCTGCATGA+AGG | 0.468866 | 4.1:-14655835 | None:intergenic |
GAGATCGGACGTTCCGTTTG+CGG | 0.472640 | 4.1:-14651666 | None:intergenic |
CTTAACAAGATCGTCATCTT+CGG | 0.472983 | 4.1:-14651944 | None:intergenic |
CAGGTTCATTCAATTACAAA+AGG | 0.473778 | 4.1:+14652634 | MS.gene09258:CDS |
CCGATCAGAATCGCCGGCGC+CGG | 0.477749 | 4.1:-14652058 | None:intergenic |
TTTCTGGGTGCTAGAGATGT+TGG | 0.478007 | 4.1:+14653182 | MS.gene09258:CDS |
TTGAAATTGTTCAAAGCCCC+AGG | 0.478616 | 4.1:+14652615 | MS.gene09258:CDS |
TAACAACATGTTTCTGAGAT+GGG | 0.479696 | 4.1:-14655921 | None:intergenic |
ACCTCAGAATGTCAAACCTA+TGG | 0.482063 | 4.1:+14653397 | MS.gene09258:CDS |
AAAGCTCACCGTACCCGCTC+CGG | 0.482065 | 4.1:+14651721 | MS.gene09258:CDS |
TTCTCAGTATCTACTTGCAT+TGG | 0.482411 | 4.1:-14653080 | None:intergenic |
TCAAACTTGCAAGTAACTCC+TGG | 0.489368 | 4.1:+14655371 | MS.gene09258:CDS |
AATCTTATCACACACCATTA+CGG | 0.491836 | 4.1:-14654418 | None:intergenic |
GATGGGATACTTCCTTCATA+AGG | 0.492449 | 4.1:-14655904 | None:intergenic |
GAGTGGATTATTTCTCTCAT+GGG | 0.495906 | 4.1:-14653471 | None:intergenic |
CTTACATGTTTGCTCTTGAG+TGG | 0.497544 | 4.1:-14653488 | None:intergenic |
AAGCTGTCAGATGAAGATTT+GGG | 0.498032 | 4.1:+14652276 | MS.gene09258:CDS |
CGGGTGAATGTGGATGAGGC+GGG | 0.499168 | 4.1:-14651694 | None:intergenic |
AACCAAAGGACTTTCAGATT+CGG | 0.499438 | 4.1:+14651870 | MS.gene09258:CDS |
AACAGGAACGGGAACGGAAG+AGG | 0.499995 | 4.1:-14651827 | None:intergenic |
CGATCTGAAAACTTAACACT+TGG | 0.500039 | 4.1:-14656889 | None:intergenic |
ACCTGACTTCCATCCAAAAG+AGG | 0.501538 | 4.1:-14655974 | None:intergenic |
TCGGAGGAGTCTTGGAAAGA+TGG | 0.504525 | 4.1:-14654261 | None:intergenic |
TGATCAGCTATAGGACCTAA+AGG | 0.507484 | 4.1:-14655605 | None:intergenic |
CCATGAGATGACATATTAGC+AGG | 0.510296 | 4.1:-14654222 | None:intergenic |
TTGACATCTGATAATCATGA+AGG | 0.512397 | 4.1:+14652987 | MS.gene09258:CDS |
CGCTCCGGTCAGATCCGGTC+CGG | 0.514035 | 4.1:+14651736 | MS.gene09258:CDS |
CAAATCTTCATCTGACAGCT+TGG | 0.516191 | 4.1:-14652274 | None:intergenic |
GGTTCAAAGATGCCTTCAAA+AGG | 0.517017 | 4.1:+14654840 | MS.gene09258:CDS |
TTCAGGTGAAAGAAGCCTGC+AGG | 0.518152 | 4.1:+14656699 | MS.gene09258:intron |
ACTAGATTCTTCATTTGAGA+TGG | 0.520142 | 4.1:-14654718 | None:intergenic |
TATTTCTCTCATGGGCTTTG+GGG | 0.520188 | 4.1:-14653463 | None:intergenic |
AATCGCCGGCGCCGGCAAGT+GGG | 0.521074 | 4.1:-14652050 | None:intergenic |
CCCCTGGTTCAGTCAACTAT+AGG | 0.521818 | 4.1:+14653833 | MS.gene09258:CDS |
TCGCCATCAATTGCTGAAAA+CGG | 0.522563 | 4.1:+14652174 | MS.gene09258:CDS |
GCACCATGGGTGATACCAAT+GGG | 0.525467 | 4.1:+14653039 | MS.gene09258:CDS |
GAATCGCCGGCGCCGGCAAG+TGG | 0.526594 | 4.1:-14652051 | None:intergenic |
CTTGGCGTTAGTTCCCGAAA+AGG | 0.530408 | 4.1:+14655746 | MS.gene09258:CDS |
CCTCGCACGGAGGTCCTTGG+TGG | 0.530427 | 4.1:-14652016 | None:intergenic |
GACTGATCCTTGTTCCGTAA+TGG | 0.533682 | 4.1:+14654404 | MS.gene09258:CDS |
CATCATTCAAGCAATGAGAA+AGG | 0.534669 | 4.1:+14654519 | MS.gene09258:CDS |
TCCATAGGTTTGACATTCTG+AGG | 0.534755 | 4.1:-14653398 | None:intergenic |
GAAGAGGGTTCCTCTTGAAA+CGG | 0.536043 | 4.1:-14651811 | None:intergenic |
CTGAAACACCTGGATGTTGT+CGG | 0.536845 | 4.1:+14655684 | MS.gene09258:CDS |
TGCGGGAACTTGAACCGGAC+CGG | 0.537490 | 4.1:-14651750 | None:intergenic |
TTCATAAACCATATTTGCAC+GGG | 0.537606 | 4.1:+14653797 | MS.gene09258:CDS |
GTACCCGCTCCGGTCAGATC+CGG | 0.538113 | 4.1:+14651731 | MS.gene09258:CDS |
GGGAATAAATTCGCCTCGCA+CGG | 0.538413 | 4.1:-14652029 | None:intergenic |
TGGCCCATTGGTATCACCCA+TGG | 0.538471 | 4.1:-14653042 | None:intergenic |
GGACCGGATCTGACCGGAGC+GGG | 0.538597 | 4.1:-14651734 | None:intergenic |
CCTGCTAATATGTCATCTCA+TGG | 0.541971 | 4.1:+14654222 | MS.gene09258:CDS |
GAAGCTTCTTCACTTTGAGA+TGG | 0.542689 | 4.1:-14654117 | None:intergenic |
GGATCTGACCGGAGCGGGTA+CGG | 0.543526 | 4.1:-14651729 | None:intergenic |
AGCTTTGCTGCGGGTGAATG+TGG | 0.543562 | 4.1:-14651704 | None:intergenic |
ACAGATCAACTTGATGCCCT+TGG | 0.544853 | 4.1:+14655728 | MS.gene09258:CDS |
TGTGATGATATTGTGCTCAA+TGG | 0.546109 | 4.1:+14653356 | MS.gene09258:CDS |
TGATTTCTCCCTGTTGGACA+AGG | 0.546492 | 4.1:-14655660 | None:intergenic |
TGATCCGAAATTCCCGCAAA+CGG | 0.547137 | 4.1:+14651653 | MS.gene09258:CDS |
ACAGGAACGGGAACGGAAGA+GGG | 0.547351 | 4.1:-14651826 | None:intergenic |
GCGGGTGAATGTGGATGAGG+CGG | 0.548554 | 4.1:-14651695 | None:intergenic |
GATCCTATGGGTGATAGTAC+AGG | 0.549573 | 4.1:+14655413 | MS.gene09258:CDS |
AAGATTGATAGTTGCACCAT+GGG | 0.550130 | 4.1:+14653026 | MS.gene09258:CDS |
TGTGATAAGATTGTCACAAA+TGG | 0.552424 | 4.1:+14654429 | MS.gene09258:CDS |
AAGGAGTTCTCGAGATAGTA+GGG | 0.552552 | 4.1:-14655542 | None:intergenic |
TATTCAAGTCAACTTTGTCA+TGG | 0.552776 | 4.1:-14654173 | None:intergenic |
AGTTGTCACTAGAGAAGAAG+TGG | 0.553740 | 4.1:+14655628 | MS.gene09258:CDS |
GGCTGTGCCTTAGAGCAGCT+TGG | 0.560567 | 4.1:+14653287 | MS.gene09258:CDS |
ATAGGACCTAAAGGTGTGAC+TGG | 0.561769 | 4.1:-14655596 | None:intergenic |
GTAGATACTGAGAAAGTGAA+TGG | 0.563342 | 4.1:+14653089 | MS.gene09258:CDS |
GGAATTTCGGATCACGTCCA+TGG | 0.563873 | 4.1:-14651644 | None:intergenic |
GGTTCTAAATCGCTGCCCAC+GGG | 0.564160 | 4.1:+14655084 | MS.gene09258:intron |
GCATCTTTGAACCATTAACT+AGG | 0.564566 | 4.1:-14654830 | None:intergenic |
CCTAATGATGTCATCTGTGT+AGG | 0.564732 | 4.1:+14652324 | MS.gene09258:CDS |
GTGTTTATCTGTGCCATCTG+TGG | 0.564797 | 4.1:+14653115 | MS.gene09258:CDS |
TGCACCATGGGTGATACCAA+TGG | 0.565398 | 4.1:+14653038 | MS.gene09258:CDS |
GACAAGCTCCGACAACATCC+AGG | 0.565824 | 4.1:-14655692 | None:intergenic |
TTGATCCTCGCATCATCCAC+AGG | 0.565826 | 4.1:-14652204 | None:intergenic |
AAAAGGAACAGGAACGGGAA+CGG | 0.566531 | 4.1:-14651833 | None:intergenic |
AAGAAGGTTATGGGAGGTCA+GGG | 0.566531 | 4.1:+14652951 | MS.gene09258:CDS |
ATGATGCTCAAATGAAAGGT+TGG | 0.567253 | 4.1:-14654502 | None:intergenic |
TACTTCCCGATCAGAATCGC+CGG | 0.567923 | 4.1:-14652064 | None:intergenic |
TTGAATGATGCTCAAATGAA+AGG | 0.568241 | 4.1:-14654506 | None:intergenic |
GTTCATAAACCATATTTGCA+CGG | 0.569319 | 4.1:+14653796 | MS.gene09258:CDS |
AGGTTCTAAATCGCTGCCCA+CGG | 0.570248 | 4.1:+14655083 | MS.gene09258:intron |
CGATGTGAGGAATGTGGAAG+AGG | 0.571374 | 4.1:+14652362 | MS.gene09258:CDS |
CTTATCTGCACCCTCTGTTG+AGG | 0.573087 | 4.1:+14654326 | MS.gene09258:CDS |
GATAAGATTGTCACAAATGG+TGG | 0.573529 | 4.1:+14654432 | MS.gene09258:CDS |
AGATGCCAGTTCTGGCCCAT+TGG | 0.574730 | 4.1:-14653054 | None:intergenic |
GGAAAATGGCAGTGTGAGGA+CGG | 0.575753 | 4.1:+14652119 | MS.gene09258:CDS |
ATCGCCGGCGCCGGCAAGTG+GGG | 0.577299 | 4.1:-14652049 | None:intergenic |
AACAGAAATTGGTGAAACAA+AGG | 0.578081 | 4.1:-14655561 | None:intergenic |
GTGAATGTGGATGAGGCGGG+TGG | 0.579031 | 4.1:-14651691 | None:intergenic |
GGTACGGTGAGCTTTGCTGC+GGG | 0.582951 | 4.1:-14651713 | None:intergenic |
TCTTCACTTTGAGATGGCAA+AGG | 0.583276 | 4.1:-14654111 | None:intergenic |
GGGGCTTTGAACAATTTCAA+AGG | 0.583740 | 4.1:-14652612 | None:intergenic |
GTTGGTAATGCTTTCGACCA+CGG | 0.584626 | 4.1:+14653200 | MS.gene09258:CDS |
TCACACACCATTACGGAACA+AGG | 0.589266 | 4.1:-14654411 | None:intergenic |
AAAAGGCTAATGGATGCTAT+GGG | 0.591299 | 4.1:+14652651 | MS.gene09258:CDS |
TTTGTAATTGAATGAACCTG+GGG | 0.594391 | 4.1:-14652631 | None:intergenic |
TGTGGAAACGATGTAACCAA+AGG | 0.595525 | 4.1:+14651856 | MS.gene09258:CDS |
TGAAACAGAACAACTTGCAA+AGG | 0.595999 | 4.1:+14656730 | MS.gene09258:CDS |
GAATCTGAAATTGGCAGAAG+TGG | 0.596355 | 4.1:-14655350 | None:intergenic |
GGTTCAAGTTCCGTTTCAAG+AGG | 0.600363 | 4.1:+14651801 | MS.gene09258:CDS |
GCTGCGGGTGAATGTGGATG+AGG | 0.602043 | 4.1:-14651698 | None:intergenic |
GGGAAGCTGATCAAAACCCC+TGG | 0.602371 | 4.1:+14653817 | MS.gene09258:CDS |
TGAACCGGACCGGATCTGAC+CGG | 0.603361 | 4.1:-14651740 | None:intergenic |
GAATAATCTTGACTGTGCTA+AGG | 0.603599 | 4.1:+14653250 | MS.gene09258:CDS |
CCACCAAGGACCTCCGTGCG+AGG | 0.606940 | 4.1:+14652016 | MS.gene09258:CDS |
TCAGAGTTAGCCTCAACAGA+GGG | 0.608322 | 4.1:-14654336 | None:intergenic |
TCATTGTCATGAAGACAAGA+AGG | 0.608420 | 4.1:+14652935 | MS.gene09258:CDS |
GACACTGCAACACATGGTGG+TGG | 0.614063 | 4.1:+14654783 | MS.gene09258:CDS |
GAGAAATCACCTGAAACACC+TGG | 0.614071 | 4.1:+14655674 | MS.gene09258:CDS |
AGGTCCTTGGTGGTAGCACA+AGG | 0.615884 | 4.1:-14652006 | None:intergenic |
TTCTGGAAAATGGCAGTGTG+AGG | 0.618228 | 4.1:+14652115 | MS.gene09258:CDS |
CTGGTTCAGTCAACTATAGG+AGG | 0.621061 | 4.1:+14653836 | MS.gene09258:CDS |
GGGTACGGTGAGCTTTGCTG+CGG | 0.621821 | 4.1:-14651714 | None:intergenic |
GGTTGCCCAAGACCTTATGA+AGG | 0.622380 | 4.1:+14655892 | MS.gene09258:CDS |
TAAATGCTTGAGTGAATCAA+AGG | 0.622735 | 4.1:+14653142 | MS.gene09258:CDS |
AGCAGACAAATGACTGTCAG+TGG | 0.623587 | 4.1:+14654144 | MS.gene09258:CDS |
ATGCTTGAGTGAATCAAAGG+TGG | 0.624188 | 4.1:+14653145 | MS.gene09258:CDS |
CCAAAAGCTTCTGAAGTTTG+GGG | 0.630512 | 4.1:-14655319 | None:intergenic |
TCAGCTGCTAGATGCCGAAG+AGG | 0.631980 | 4.1:+14655871 | MS.gene09258:CDS |
GTAGCTGAAAATTCAAGCGA+GGG | 0.632081 | 4.1:+14652426 | MS.gene09258:CDS |
TAGAAGCTAGCTGCGATGTG+AGG | 0.635076 | 4.1:+14652349 | MS.gene09258:CDS |
CTCAGAGTTAGCCTCAACAG+AGG | 0.638818 | 4.1:-14654337 | None:intergenic |
CCTATAGTTGACTGAACCAG+GGG | 0.639145 | 4.1:-14653833 | None:intergenic |
TTTAGACTCTGAGCTTCAGG+AGG | 0.640447 | 4.1:-14654600 | None:intergenic |
TGTAGCTGAAAATTCAAGCG+AGG | 0.644391 | 4.1:+14652425 | MS.gene09258:CDS |
AACAATTTCAAAGGTAAACG+CGG | 0.645334 | 4.1:-14652603 | None:intergenic |
TTACCAGACACTGCAACACA+TGG | 0.645552 | 4.1:+14654777 | MS.gene09258:CDS |
TCAAATGATTGTGATCCTAT+GGG | 0.646538 | 4.1:+14655401 | MS.gene09258:CDS |
TTTCCTGTACTATCACCCAT+AGG | 0.646734 | 4.1:-14655416 | None:intergenic |
TCATGATTATCAGATGTCAA+AGG | 0.647040 | 4.1:-14652984 | None:intergenic |
TAAGATTGATAGTTGCACCA+TGG | 0.648864 | 4.1:+14653025 | MS.gene09258:CDS |
TACACCTGCCTTGTCCAACA+GGG | 0.649992 | 4.1:+14655652 | MS.gene09258:CDS |
AAATTGTATTGGCAATTCGG+AGG | 0.653709 | 4.1:-14654277 | None:intergenic |
AAGCATTTATCATCCACAGA+TGG | 0.656457 | 4.1:-14653128 | None:intergenic |
AAAACCCAAGAGGATGCAGA+GGG | 0.661927 | 4.1:+14655780 | MS.gene09258:CDS |
AGAGGCGGATTTATATGCAA+AGG | 0.665530 | 4.1:+14654077 | MS.gene09258:CDS |
TCCTATAGTTGACTGAACCA+GGG | 0.668929 | 4.1:-14653834 | None:intergenic |
GCTAAGGCTGCTGATCACAA+TGG | 0.673146 | 4.1:+14653266 | MS.gene09258:CDS |
ATACACCTGTGGATGATGCG+AGG | 0.679193 | 4.1:+14652199 | MS.gene09258:CDS |
TTTGGAATCCAATACTACAC+CGG | 0.686242 | 4.1:+14654908 | MS.gene09258:CDS |
ATTCCCCTATCAAAATTCAG+AGG | 0.686862 | 4.1:-14652249 | None:intergenic |
ATAAGATTGTCACAAATGGT+GGG | 0.687693 | 4.1:+14654433 | MS.gene09258:CDS |
AATAAATTCGCCTCGCACGG+AGG | 0.688523 | 4.1:-14652026 | None:intergenic |
GTTGCAGTGTCTGGTAACGC+AGG | 0.694475 | 4.1:-14654771 | None:intergenic |
GTTGTCACTAGAGAAGAAGT+GGG | 0.694605 | 4.1:+14655629 | MS.gene09258:CDS |
TCTACCTTGTGCTACCACCA+AGG | 0.697929 | 4.1:+14652002 | MS.gene09258:CDS |
GAAGACAAGAAGGTTATGGG+AGG | 0.705451 | 4.1:+14652945 | MS.gene09258:CDS |
CCAGACACTGCAACACATGG+TGG | 0.710994 | 4.1:+14654780 | MS.gene09258:CDS |
TGAAAACGGCGATACACCTG+TGG | 0.720243 | 4.1:+14652188 | MS.gene09258:CDS |
ACACAGATGACATCATTAGG+TGG | 0.722388 | 4.1:-14652321 | None:intergenic |
TAGCTGCGATGTGAGGAATG+TGG | 0.763594 | 4.1:+14652356 | MS.gene09258:CDS |
CGGACCGGATCTGACCGGAG+CGG | 0.781159 | 4.1:-14651735 | None:intergenic |
AATCTTGCTTAACATCACCG+TGG | 0.800564 | 4.1:-14653217 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAACAAATTGTTTATT+TGG | - | chr4.1:14656840-14656859 | None:intergenic | 10.0% |
!!! | ATAAGTTTAGTTTTAAAAAA+CGG | - | chr4.1:14655266-14655285 | None:intergenic | 10.0% |
!!! | TTATTTTTCATTTTTTTGAT+TGG | + | chr4.1:14655238-14655257 | MS.gene09258:intron | 10.0% |
!!! | TTTTTTATTTGAATATTTTC+AGG | + | chr4.1:14656682-14656701 | MS.gene09258:intron | 10.0% |
!! | ATTCAATCAATAAATAACAA+AGG | - | chr4.1:14652830-14652849 | None:intergenic | 15.0% |
!! | ATTTAAATAACCAAACTTAT+CGG | - | chr4.1:14656175-14656194 | None:intergenic | 15.0% |
!! | TGATGAAAATAAAAATTGAA+AGG | - | chr4.1:14652492-14652511 | None:intergenic | 15.0% |
!!! | TGATATAAATTTATTTTCTC+AGG | + | chr4.1:14656320-14656339 | MS.gene09258:intron | 15.0% |
!! | AATTATATATCATGTAACCT+GGG | + | chr4.1:14653761-14653780 | MS.gene09258:intron | 20.0% |
!! | ATAAAATGATCAGAAAAGAA+AGG | - | chr4.1:14656046-14656065 | None:intergenic | 20.0% |
!! | GATATATACACAAAAGATTA+TGG | - | chr4.1:14654940-14654959 | None:intergenic | 20.0% |
!! | GCAAAATATTATAAACTTGT+CGG | - | chr4.1:14656374-14656393 | None:intergenic | 20.0% |
!! | TAAACAAATTGTTTATTTGG+AGG | - | chr4.1:14656837-14656856 | None:intergenic | 20.0% |
!! | TAATGTAGCATAAAAATAAG+AGG | + | chr4.1:14656635-14656654 | MS.gene09258:intron | 20.0% |
!! | TGAAATGAAATAATAGTGAA+AGG | - | chr4.1:14656216-14656235 | None:intergenic | 20.0% |
!! | TGCAAACAACTAAATAATAA+AGG | - | chr4.1:14652710-14652729 | None:intergenic | 20.0% |
!! | TTAATATTGTATTGCATAAG+TGG | - | chr4.1:14653921-14653940 | None:intergenic | 20.0% |
!!! | ACTAAACTTATACTACTTTT+AGG | + | chr4.1:14655275-14655294 | MS.gene09258:intron | 20.0% |
!!! | AGTATTGGTTTTTATTCTAT+TGG | + | chr4.1:14655191-14655210 | MS.gene09258:intron | 20.0% |
!!! | ATGAAATTTTGTTAGTTGAT+TGG | + | chr4.1:14652558-14652577 | MS.gene09258:intron | 20.0% |
!!! | ATTAAGCAAATTTTGTTCTT+TGG | - | chr4.1:14654466-14654485 | None:intergenic | 20.0% |
!!! | TAACCATTTTTTAATCTGTT+TGG | - | chr4.1:14656937-14656956 | None:intergenic | 20.0% |
!!! | TTAAGCAAATTTTGTTCTTT+GGG | - | chr4.1:14654465-14654484 | None:intergenic | 20.0% |
!!! | TTAAGTTTTTAAAACATGCT+GGG | + | chr4.1:14655107-14655126 | MS.gene09258:CDS | 20.0% |
!!! | TTTTTCTCAAAATTCCTTTT+CGG | - | chr4.1:14655763-14655782 | None:intergenic | 20.0% |
! | AAAAAAATGGCAAAGTTACT+TGG | - | chr4.1:14656467-14656486 | None:intergenic | 25.0% |
! | AAAAGGAAGCAATAACAAAA+AGG | + | chr4.1:14654857-14654876 | MS.gene09258:CDS | 25.0% |
! | AAAGAAAAAAGTCTTCTGAA+TGG | + | chr4.1:14654807-14654826 | MS.gene09258:CDS | 25.0% |
! | AAATCTCTATGAACAGAAAT+TGG | - | chr4.1:14655575-14655594 | None:intergenic | 25.0% |
! | AACCAAATTGACATTGTATT+AGG | - | chr4.1:14653608-14653627 | None:intergenic | 25.0% |
! | AGTAGAAAAACAGTCAAATA+AGG | - | chr4.1:14656523-14656542 | None:intergenic | 25.0% |
! | ATAAAACCTCAAGTAAATTC+TGG | + | chr4.1:14656410-14656429 | MS.gene09258:intron | 25.0% |
! | ATTCAATTACAAAAGGCTAA+TGG | + | chr4.1:14652641-14652660 | MS.gene09258:CDS | 25.0% |
! | CAACCAAACAGATTAAAAAA+TGG | + | chr4.1:14656931-14656950 | MS.gene09258:CDS | 25.0% |
! | CAATTATATATCATGTAACC+TGG | + | chr4.1:14653760-14653779 | MS.gene09258:intron | 25.0% |
! | CTGAATTTATTAAGTTACAC+GGG | - | chr4.1:14656582-14656601 | None:intergenic | 25.0% |
! | GAATAAAAACCAATACTTAC+AGG | - | chr4.1:14655188-14655207 | None:intergenic | 25.0% |
! | GCTGAATTTATTAAGTTACA+CGG | - | chr4.1:14656583-14656602 | None:intergenic | 25.0% |
! | TACCTAATACAATGTCAATT+TGG | + | chr4.1:14653603-14653622 | MS.gene09258:intron | 25.0% |
! | TATAATCAATGAGAAAGAGA+GGG | - | chr4.1:14654994-14655013 | None:intergenic | 25.0% |
! | TGACAATATATGCATATACA+TGG | + | chr4.1:14653722-14653741 | MS.gene09258:intron | 25.0% |
! | TTATAATCAATGAGAAAGAG+AGG | - | chr4.1:14654995-14655014 | None:intergenic | 25.0% |
! | TTGACATTGTATTAGGTATT+AGG | - | chr4.1:14653601-14653620 | None:intergenic | 25.0% |
! | TTGGGAAGATTCTTAAAATA+TGG | - | chr4.1:14653868-14653887 | None:intergenic | 25.0% |
! | TTTATAGGAATACCGAAATT+GGG | + | chr4.1:14652912-14652931 | MS.gene09258:intron | 25.0% |
!! | AATTGGCATCGTAATTTTAT+AGG | + | chr4.1:14652897-14652916 | MS.gene09258:intron | 25.0% |
!! | TATTTGGAGGAACAAATTTT+GGG | - | chr4.1:14656824-14656843 | None:intergenic | 25.0% |
!! | TTATTTGGAGGAACAAATTT+TGG | - | chr4.1:14656825-14656844 | None:intergenic | 25.0% |
!! | TTCTCATTTTCCAACAAAAT+CGG | - | chr4.1:14655157-14655176 | None:intergenic | 25.0% |
!! | TTGATCAAGTAATTTTGAAC+AGG | + | chr4.1:14655063-14655082 | MS.gene09258:intron | 25.0% |
!! | TTTTATAGGAATACCGAAAT+TGG | + | chr4.1:14652911-14652930 | MS.gene09258:intron | 25.0% |
!! | TTTTCTCAAAATTCCTTTTC+GGG | - | chr4.1:14655762-14655781 | None:intergenic | 25.0% |
!! | TTTTGTAATTGAATGAACCT+GGG | - | chr4.1:14652635-14652654 | None:intergenic | 25.0% |
!!! | ATACATGGTTTTGTATTTGT+TGG | + | chr4.1:14653737-14653756 | MS.gene09258:intron | 25.0% |
!!! | ATTTAGTTTTACATGTGCAA+CGG | + | chr4.1:14652744-14652763 | MS.gene09258:intron | 25.0% |
!!! | CTTGAGGTTTTATTTCTAAA+TGG | - | chr4.1:14656403-14656422 | None:intergenic | 25.0% |
!!! | GTTAAGTTTTTAAAACATGC+TGG | + | chr4.1:14655106-14655125 | MS.gene09258:CDS | 25.0% |
AACAATTTCAAAGGTAAACG+CGG | - | chr4.1:14652606-14652625 | None:intergenic | 30.0% | |
AACAGAAATTGGTGAAACAA+AGG | - | chr4.1:14655564-14655583 | None:intergenic | 30.0% | |
AATCTTATCACACACCATTA+CGG | - | chr4.1:14654421-14654440 | None:intergenic | 30.0% | |
ACAATTTGACGCAAAAGAAA+TGG | + | chr4.1:14654293-14654312 | MS.gene09258:CDS | 30.0% | |
ACTAGATTCTTCATTTGAGA+TGG | - | chr4.1:14654721-14654740 | None:intergenic | 30.0% | |
AGTCTAATTCCTGTAAGTAT+TGG | + | chr4.1:14655176-14655195 | MS.gene09258:intron | 30.0% | |
ATAAGATTGTCACAAATGGT+GGG | + | chr4.1:14654433-14654452 | MS.gene09258:CDS | 30.0% | |
ATAATCAATGAGAAAGAGAG+GGG | - | chr4.1:14654993-14655012 | None:intergenic | 30.0% | |
ATAGTCATATCAACATCATG+TGG | - | chr4.1:14656005-14656024 | None:intergenic | 30.0% | |
ATTATCTCATCCGATAAGTT+TGG | + | chr4.1:14656162-14656181 | MS.gene09258:intron | 30.0% | |
CAACTATCAATCTTAGTTTC+AGG | - | chr4.1:14653020-14653039 | None:intergenic | 30.0% | |
CAGCTGAAATTTCTGAATTA+GGG | + | chr4.1:14652145-14652164 | MS.gene09258:CDS | 30.0% | |
CAGGTTCATTCAATTACAAA+AGG | + | chr4.1:14652634-14652653 | MS.gene09258:CDS | 30.0% | |
CTTCACGATAATAACTGAAA+TGG | + | chr4.1:14656070-14656089 | MS.gene09258:intron | 30.0% | |
GAAATTTCTGAATTAGGGTT+TGG | + | chr4.1:14652150-14652169 | MS.gene09258:CDS | 30.0% | |
GGTCAAATGCACTAAAAAAA+TGG | - | chr4.1:14656480-14656499 | None:intergenic | 30.0% | |
GTTCATAAACCATATTTGCA+CGG | + | chr4.1:14653796-14653815 | MS.gene09258:CDS | 30.0% | |
TAAATGCTTGAGTGAATCAA+AGG | + | chr4.1:14653142-14653161 | MS.gene09258:CDS | 30.0% | |
TAATAGTGAAAGGAATTGCA+AGG | - | chr4.1:14656206-14656225 | None:intergenic | 30.0% | |
TATCTTGTAGTTGAGATCTT+GGG | - | chr4.1:14655502-14655521 | None:intergenic | 30.0% | |
TATTCAAGTCAACTTTGTCA+TGG | - | chr4.1:14654176-14654195 | None:intergenic | 30.0% | |
TCAAATGATTGTGATCCTAT+GGG | + | chr4.1:14655401-14655420 | MS.gene09258:CDS | 30.0% | |
TCAGCTGAAATTTCTGAATT+AGG | + | chr4.1:14652144-14652163 | MS.gene09258:CDS | 30.0% | |
TCATGATTATCAGATGTCAA+AGG | - | chr4.1:14652987-14653006 | None:intergenic | 30.0% | |
TCTTCAGCATCTAACATATT+AGG | - | chr4.1:14654636-14654655 | None:intergenic | 30.0% | |
TGTGATAAGATTGTCACAAA+TGG | + | chr4.1:14654429-14654448 | MS.gene09258:CDS | 30.0% | |
TGTTAAGATCATCATTCATC+TGG | - | chr4.1:14656766-14656785 | None:intergenic | 30.0% | |
TGTTTAAACTTCCACTATAG+TGG | + | chr4.1:14653664-14653683 | MS.gene09258:intron | 30.0% | |
TTAAGCAAGATTCTTTCAAC+AGG | + | chr4.1:14653228-14653247 | MS.gene09258:CDS | 30.0% | |
TTATCTTGTAGTTGAGATCT+TGG | - | chr4.1:14655503-14655522 | None:intergenic | 30.0% | |
TTATTATGCAAAGCTTGTGA+TGG | + | chr4.1:14656125-14656144 | MS.gene09258:intron | 30.0% | |
TTCAAAGGAGTAAATCTGTA+AGG | + | chr4.1:14652466-14652485 | MS.gene09258:intron | 30.0% | |
TTCAAATGATTGTGATCCTA+TGG | + | chr4.1:14655400-14655419 | MS.gene09258:CDS | 30.0% | |
TTCATAAACCATATTTGCAC+GGG | + | chr4.1:14653797-14653816 | MS.gene09258:CDS | 30.0% | |
TTGAATGATGCTCAAATGAA+AGG | - | chr4.1:14654509-14654528 | None:intergenic | 30.0% | |
TTGACATCTGATAATCATGA+AGG | + | chr4.1:14652987-14653006 | MS.gene09258:CDS | 30.0% | |
TTGATCTGTGACTTTCATTT+CGG | - | chr4.1:14655717-14655736 | None:intergenic | 30.0% | |
TTTCATCATTGCATATGTGT+TGG | + | chr4.1:14652504-14652523 | MS.gene09258:intron | 30.0% | |
TTTGTAATTGAATGAACCTG+GGG | - | chr4.1:14652634-14652653 | None:intergenic | 30.0% | |
! | AGAAAAATAGCTCTGTTCAA+AGG | + | chr4.1:14652451-14652470 | MS.gene09258:CDS | 30.0% |
! | CTTTTGTAATTGAATGAACC+TGG | - | chr4.1:14652636-14652655 | None:intergenic | 30.0% |
! | GATACTATTGTACGTGATTT+TGG | + | chr4.1:14652783-14652802 | MS.gene09258:intron | 30.0% |
! | GCATATAAAGACGTTGATAA+TGG | - | chr4.1:14656605-14656624 | None:intergenic | 30.0% |
! | GGTAAATCTTAAAAGTATGC+AGG | - | chr4.1:14654972-14654991 | None:intergenic | 30.0% |
! | GTCAAATTGTATTGGCAATT+CGG | - | chr4.1:14654283-14654302 | None:intergenic | 30.0% |
! | TCTTTTGCGTCAAATTGTAT+TGG | - | chr4.1:14654291-14654310 | None:intergenic | 30.0% |
! | TGCAAGTTTGAATCTGAAAT+TGG | - | chr4.1:14655362-14655381 | None:intergenic | 30.0% |
!! | AGGAACAAATTTTGGGAATA+AGG | - | chr4.1:14656817-14656836 | None:intergenic | 30.0% |
!! | ATTTGTTTTCTGCCAGTTAT+GGG | + | chr4.1:14653531-14653550 | MS.gene09258:intron | 30.0% |
!! | ATTTTGAGAAAAAACCCAAG+AGG | + | chr4.1:14655770-14655789 | MS.gene09258:CDS | 30.0% |
!! | CAAAGTTGACTTGAATACTT+TGG | + | chr4.1:14654179-14654198 | MS.gene09258:CDS | 30.0% |
!! | TAACAACATGTTTCTGAGAT+GGG | - | chr4.1:14655924-14655943 | None:intergenic | 30.0% |
!! | TATTTGTTTTCTGCCAGTTA+TGG | + | chr4.1:14653530-14653549 | MS.gene09258:intron | 30.0% |
!! | TTAAAAGTATGCAGGTCTTT+TGG | - | chr4.1:14654964-14654983 | None:intergenic | 30.0% |
!! | TTGTTATTGCTTCCTTTTGA+AGG | - | chr4.1:14654855-14654874 | None:intergenic | 30.0% |
!!! | GTTTTAAAAACTTAACCCGT+GGG | - | chr4.1:14655102-14655121 | None:intergenic | 30.0% |
!!! | TGTTTTAAAAACTTAACCCG+TGG | - | chr4.1:14655103-14655122 | None:intergenic | 30.0% |
!!! | TTTGAACAGAGCTATTTTTC+TGG | - | chr4.1:14652452-14652471 | None:intergenic | 30.0% |
AACCAAAGGACTTTCAGATT+CGG | + | chr4.1:14651870-14651889 | MS.gene09258:CDS | 35.0% | |
AAGCATTTATCATCCACAGA+TGG | - | chr4.1:14653131-14653150 | None:intergenic | 35.0% | |
AAGCTGTCAGATGAAGATTT+GGG | + | chr4.1:14652276-14652295 | MS.gene09258:CDS | 35.0% | |
AATCTTCCCAAAGATGACTA+TGG | + | chr4.1:14653877-14653896 | MS.gene09258:CDS | 35.0% | |
ACTTGGAATTTCTCACCATA+GGG | - | chr4.1:14656450-14656469 | None:intergenic | 35.0% | |
AGCTCAGAGTCTAAATCAAT+TGG | + | chr4.1:14654608-14654627 | MS.gene09258:CDS | 35.0% | |
ATACTTCCTTCATAAGGTCT+TGG | - | chr4.1:14655901-14655920 | None:intergenic | 35.0% | |
ATATGTGCGATGGAACTAAT+TGG | + | chr4.1:14652880-14652899 | MS.gene09258:intron | 35.0% | |
ATGATGCTCAAATGAAAGGT+TGG | - | chr4.1:14654505-14654524 | None:intergenic | 35.0% | |
ATTCCCCTATCAAAATTCAG+AGG | - | chr4.1:14652252-14652271 | None:intergenic | 35.0% | |
ATTTCAGTATCACGAGTCAT+TGG | - | chr4.1:14653335-14653354 | None:intergenic | 35.0% | |
CAAAAGATTATGGTTCTCAC+CGG | - | chr4.1:14654930-14654949 | None:intergenic | 35.0% | |
CAAAATGTCTAACCCATAAC+TGG | - | chr4.1:14653546-14653565 | None:intergenic | 35.0% | |
CAATCATTTGAATCACTTCC+AGG | - | chr4.1:14655392-14655411 | None:intergenic | 35.0% | |
CATCATTCAAGCAATGAGAA+AGG | + | chr4.1:14654519-14654538 | MS.gene09258:CDS | 35.0% | |
CATGAAGACAAGAAGGTTAT+GGG | + | chr4.1:14652942-14652961 | MS.gene09258:CDS | 35.0% | |
CCATCATAAAAATGAAGAGG+CGG | + | chr4.1:14654062-14654081 | MS.gene09258:CDS | 35.0% | |
CGATCTGAAAACTTAACACT+TGG | - | chr4.1:14656892-14656911 | None:intergenic | 35.0% | |
CTTAACAAGATCGTCATCTT+CGG | - | chr4.1:14651947-14651966 | None:intergenic | 35.0% | |
GAATAATCTTGACTGTGCTA+AGG | + | chr4.1:14653250-14653269 | MS.gene09258:CDS | 35.0% | |
GATAAGATTGTCACAAATGG+TGG | + | chr4.1:14654432-14654451 | MS.gene09258:CDS | 35.0% | |
GATGCTATGGGAGATAATTT+CGG | + | chr4.1:14652663-14652682 | MS.gene09258:CDS | 35.0% | |
GCATCTTTGAACCATTAACT+AGG | - | chr4.1:14654833-14654852 | None:intergenic | 35.0% | |
GTAGATACTGAGAAAGTGAA+TGG | + | chr4.1:14653089-14653108 | MS.gene09258:CDS | 35.0% | |
GTTACATCGTTTCCACAAAA+AGG | - | chr4.1:14651853-14651872 | None:intergenic | 35.0% | |
TACTTCCTTCATAAGGTCTT+GGG | - | chr4.1:14655900-14655919 | None:intergenic | 35.0% | |
TACTTGGAATTTCTCACCAT+AGG | - | chr4.1:14656451-14656470 | None:intergenic | 35.0% | |
TCATGAAGACAAGAAGGTTA+TGG | + | chr4.1:14652941-14652960 | MS.gene09258:CDS | 35.0% | |
TCATGACAATGACCCAATTT+CGG | - | chr4.1:14652927-14652946 | None:intergenic | 35.0% | |
TCATTGTCATGAAGACAAGA+AGG | + | chr4.1:14652935-14652954 | MS.gene09258:CDS | 35.0% | |
TGAAACAGAACAACTTGCAA+AGG | + | chr4.1:14656730-14656749 | MS.gene09258:CDS | 35.0% | |
TGGTGAGATGAAAAATGGTT+TGG | + | chr4.1:14654890-14654909 | MS.gene09258:CDS | 35.0% | |
TGGTTACCATAGTCATCTTT+GGG | - | chr4.1:14653886-14653905 | None:intergenic | 35.0% | |
TGTGATGATATTGTGCTCAA+TGG | + | chr4.1:14653356-14653375 | MS.gene09258:CDS | 35.0% | |
TTCTCAGTATCTACTTGCAT+TGG | - | chr4.1:14653083-14653102 | None:intergenic | 35.0% | |
TTGCAAAAATGACGATGTTG+TGG | + | chr4.1:14654680-14654699 | MS.gene09258:CDS | 35.0% | |
TTTGCTGGTGAGATGAAAAA+TGG | + | chr4.1:14654885-14654904 | MS.gene09258:CDS | 35.0% | |
! | AAAAGGCTAATGGATGCTAT+GGG | + | chr4.1:14652651-14652670 | MS.gene09258:CDS | 35.0% |
! | AAATTGTATTGGCAATTCGG+AGG | - | chr4.1:14654280-14654299 | None:intergenic | 35.0% |
! | AAGATTGATAGTTGCACCAT+GGG | + | chr4.1:14653026-14653045 | MS.gene09258:CDS | 35.0% |
! | AAGATTGCTTCCGATTTTGT+TGG | + | chr4.1:14655144-14655163 | MS.gene09258:CDS | 35.0% |
! | AATTAGCTTGATATGTGCGA+TGG | + | chr4.1:14652870-14652889 | MS.gene09258:intron | 35.0% |
! | AGCAAATTTTGTTCTTTGGG+TGG | - | chr4.1:14654462-14654481 | None:intergenic | 35.0% |
! | ATTATTTCTCTCATGGGCTT+TGG | - | chr4.1:14653468-14653487 | None:intergenic | 35.0% |
! | CTAACAACATGTTTCTGAGA+TGG | - | chr4.1:14655925-14655944 | None:intergenic | 35.0% |
! | TAAGATTGATAGTTGCACCA+TGG | + | chr4.1:14653025-14653044 | MS.gene09258:CDS | 35.0% |
! | TAAGTTTTCAGATCGTGTTG+AGG | + | chr4.1:14656897-14656916 | MS.gene09258:CDS | 35.0% |
! | TCACGTTTTGCTTTCTTGAA+AGG | - | chr4.1:14651973-14651992 | None:intergenic | 35.0% |
! | TCTTGGAAAGATGGCAATTT+TGG | - | chr4.1:14654255-14654274 | None:intergenic | 35.0% |
! | TTATTTCTCTCATGGGCTTT+GGG | - | chr4.1:14653467-14653486 | None:intergenic | 35.0% |
! | TTGGTAGTTGTTCTATGTAG+AGG | + | chr4.1:14652802-14652821 | MS.gene09258:intron | 35.0% |
! | TTTGGAATCCAATACTACAC+CGG | + | chr4.1:14654908-14654927 | MS.gene09258:CDS | 35.0% |
!! | ATCCAAAAGCTTCTGAAGTT+TGG | - | chr4.1:14655324-14655343 | None:intergenic | 35.0% |
!! | ATGGTTGATTCTTTTTGCTG+CGG | - | chr4.1:14651771-14651790 | None:intergenic | 35.0% |
!! | CGCCTCTTCATTTTTATGAT+GGG | - | chr4.1:14654064-14654083 | None:intergenic | 35.0% |
!! | GAGTGGATTATTTCTCTCAT+GGG | - | chr4.1:14653474-14653493 | None:intergenic | 35.0% |
!! | TCCAAAAGCTTCTGAAGTTT+GGG | - | chr4.1:14655323-14655342 | None:intergenic | 35.0% |
!! | TGAGTGGATTATTTCTCTCA+TGG | - | chr4.1:14653475-14653494 | None:intergenic | 35.0% |
!!! | AAAGTGCTTGCTGATTTTAC+AGG | + | chr4.1:14654021-14654040 | MS.gene09258:intron | 35.0% |
!!! | AACAAAAAGGCTAGTTTTGC+TGG | + | chr4.1:14654870-14654889 | MS.gene09258:CDS | 35.0% |
!!! | CGTCATTTTTGCAAATTGCA+TGG | - | chr4.1:14654674-14654693 | None:intergenic | 35.0% |
AAAGGAGTTCTCGAGATAGT+AGG | - | chr4.1:14655546-14655565 | None:intergenic | 40.0% | |
AAGAAAGCAGTTTGTGAGTC+TGG | + | chr4.1:14654551-14654570 | MS.gene09258:CDS | 40.0% | |
AAGGAGTTCTCGAGATAGTA+GGG | - | chr4.1:14655545-14655564 | None:intergenic | 40.0% | |
AATCTTGCTTAACATCACCG+TGG | - | chr4.1:14653220-14653239 | None:intergenic | 40.0% | |
AATTTGGTTAAACCCTCAGC+TGG | + | chr4.1:14653619-14653638 | MS.gene09258:intron | 40.0% | |
ACACAGATGACATCATTAGG+TGG | - | chr4.1:14652324-14652343 | None:intergenic | 40.0% | |
ACCTCAGAATGTCAAACCTA+TGG | + | chr4.1:14653397-14653416 | MS.gene09258:CDS | 40.0% | |
AGTGCTTTCTTGAGTGTTTC+TGG | - | chr4.1:14653429-14653448 | None:intergenic | 40.0% | |
AGTTGTCACTAGAGAAGAAG+TGG | + | chr4.1:14655628-14655647 | MS.gene09258:CDS | 40.0% | |
ATAAGTGGTTGAAAACGTGG+TGG | - | chr4.1:14653906-14653925 | None:intergenic | 40.0% | |
ATAGGGCCAGAATTTACTTG+AGG | - | chr4.1:14656419-14656438 | None:intergenic | 40.0% | |
ATCGGGAAGTAGCTGAATTA+GGG | + | chr4.1:14652076-14652095 | MS.gene09258:CDS | 40.0% | |
ATGCTTGAGTGAATCAAAGG+TGG | + | chr4.1:14653145-14653164 | MS.gene09258:CDS | 40.0% | |
ATTTGGTTAAACCCTCAGCT+GGG | + | chr4.1:14653620-14653639 | MS.gene09258:intron | 40.0% | |
CAAATCTTCATCTGACAGCT+TGG | - | chr4.1:14652277-14652296 | None:intergenic | 40.0% | |
CAAATGCTCTTTCTGCATGA+AGG | - | chr4.1:14655838-14655857 | None:intergenic | 40.0% | |
CAAGCTGTCAGATGAAGATT+TGG | + | chr4.1:14652275-14652294 | MS.gene09258:CDS | 40.0% | |
CCATGAGATGACATATTAGC+AGG | - | chr4.1:14654225-14654244 | None:intergenic | 40.0% | |
CCTAAAAAAAACCCAGCTGA+GGG | - | chr4.1:14653634-14653653 | None:intergenic | 40.0% | |
CCTAATGATGTCATCTGTGT+AGG | + | chr4.1:14652324-14652343 | MS.gene09258:CDS | 40.0% | |
CCTACACAGATGACATCATT+AGG | - | chr4.1:14652327-14652346 | None:intergenic | 40.0% | |
CCTGCTAATATGTCATCTCA+TGG | + | chr4.1:14654222-14654241 | MS.gene09258:CDS | 40.0% | |
CGAAGATGACGATCTTGTTA+AGG | + | chr4.1:14651945-14651964 | MS.gene09258:CDS | 40.0% | |
CTTACATGTTTGCTCTTGAG+TGG | - | chr4.1:14653491-14653510 | None:intergenic | 40.0% | |
CTTCTGAATGGCCTAGTTAA+TGG | + | chr4.1:14654819-14654838 | MS.gene09258:CDS | 40.0% | |
CTTGGAATTTCTCACCATAG+GGG | - | chr4.1:14656449-14656468 | None:intergenic | 40.0% | |
GAATCAACCATACTCAGTTC+CGG | + | chr4.1:14651780-14651799 | MS.gene09258:CDS | 40.0% | |
GACAACGAAGCTATCTCATA+AGG | - | chr4.1:14656501-14656520 | None:intergenic | 40.0% | |
GATGGGATACTTCCTTCATA+AGG | - | chr4.1:14655907-14655926 | None:intergenic | 40.0% | |
GATTTACCAGTCACACCTTT+AGG | + | chr4.1:14655590-14655609 | MS.gene09258:CDS | 40.0% | |
GGAATAAGGTATGCACATAC+AGG | - | chr4.1:14656803-14656822 | None:intergenic | 40.0% | |
GGCCCATCATAAAAATGAAG+AGG | + | chr4.1:14654059-14654078 | MS.gene09258:CDS | 40.0% | |
GGTGATAGTACAGGAAATTC+TGG | + | chr4.1:14655422-14655441 | MS.gene09258:CDS | 40.0% | |
GGTTCAAAGATGCCTTCAAA+AGG | + | chr4.1:14654840-14654859 | MS.gene09258:CDS | 40.0% | |
GTAGCTGAAAATTCAAGCGA+GGG | + | chr4.1:14652426-14652445 | MS.gene09258:CDS | 40.0% | |
GTGACAACTTGATCAGCTAT+AGG | - | chr4.1:14655617-14655636 | None:intergenic | 40.0% | |
GTGGTTACCATAGTCATCTT+TGG | - | chr4.1:14653887-14653906 | None:intergenic | 40.0% | |
GTTGATTGGATTCTTGATGC+AGG | + | chr4.1:14652572-14652591 | MS.gene09258:intron | 40.0% | |
GTTGTCACTAGAGAAGAAGT+GGG | + | chr4.1:14655629-14655648 | MS.gene09258:CDS | 40.0% | |
TAAACTTCCACTATAGTGGC+TGG | + | chr4.1:14653668-14653687 | MS.gene09258:intron | 40.0% | |
TATTTCTCTCATGGGCTTTG+GGG | - | chr4.1:14653466-14653485 | None:intergenic | 40.0% | |
TCAAACTTGCAAGTAACTCC+TGG | + | chr4.1:14655371-14655390 | MS.gene09258:CDS | 40.0% | |
TCCACAAAAAGGAACAGGAA+CGG | - | chr4.1:14651842-14651861 | None:intergenic | 40.0% | |
TCCATAGGTTTGACATTCTG+AGG | - | chr4.1:14653401-14653420 | None:intergenic | 40.0% | |
TCCTATAGTTGACTGAACCA+GGG | - | chr4.1:14653837-14653856 | None:intergenic | 40.0% | |
TCGCCATCAATTGCTGAAAA+CGG | + | chr4.1:14652174-14652193 | MS.gene09258:CDS | 40.0% | |
TCGTTTCCACAAAAAGGAAC+AGG | - | chr4.1:14651847-14651866 | None:intergenic | 40.0% | |
TCTTGAAACGGAACTTGAAC+CGG | - | chr4.1:14651802-14651821 | None:intergenic | 40.0% | |
TGATCAGCTATAGGACCTAA+AGG | - | chr4.1:14655608-14655627 | None:intergenic | 40.0% | |
TGATTTAGACTCTGAGCTTC+AGG | - | chr4.1:14654606-14654625 | None:intergenic | 40.0% | |
TGCATAAGTGGTTGAAAACG+TGG | - | chr4.1:14653909-14653928 | None:intergenic | 40.0% | |
TGTAGCTGAAAATTCAAGCG+AGG | + | chr4.1:14652425-14652444 | MS.gene09258:CDS | 40.0% | |
TGTGGAAACGATGTAACCAA+AGG | + | chr4.1:14651856-14651875 | MS.gene09258:CDS | 40.0% | |
TTCAGATCGTGTTGAGGAAA+AGG | + | chr4.1:14656903-14656922 | MS.gene09258:CDS | 40.0% | |
TTCCGAATCTGAAAGTCCTT+TGG | - | chr4.1:14651875-14651894 | None:intergenic | 40.0% | |
TTGAAATTGTTCAAAGCCCC+AGG | + | chr4.1:14652615-14652634 | MS.gene09258:CDS | 40.0% | |
TTGGAATTTCTCACCATAGG+GGG | - | chr4.1:14656448-14656467 | None:intergenic | 40.0% | |
TTTCCTGTACTATCACCCAT+AGG | - | chr4.1:14655419-14655438 | None:intergenic | 40.0% | |
! | AGAGGCGGATTTATATGCAA+AGG | + | chr4.1:14654077-14654096 | MS.gene09258:CDS | 40.0% |
! | CAAAAGGCTAATGGATGCTA+TGG | + | chr4.1:14652650-14652669 | MS.gene09258:CDS | 40.0% |
! | GAAGCTTCTTCACTTTGAGA+TGG | - | chr4.1:14654120-14654139 | None:intergenic | 40.0% |
! | GAATCTGAAATTGGCAGAAG+TGG | - | chr4.1:14655353-14655372 | None:intergenic | 40.0% |
! | TTTGAGATGGCAAAGGAAGT+TGG | - | chr4.1:14654107-14654126 | None:intergenic | 40.0% |
! | TTTTCAGCTACATTAGCAGC+AGG | - | chr4.1:14652417-14652436 | None:intergenic | 40.0% |
!! | ACGAGCCTCTGAATTTTGAT+AGG | + | chr4.1:14652244-14652263 | MS.gene09258:CDS | 40.0% |
!! | ATTAGGGTTTTATGCTCCGT+CGG | + | chr4.1:14652092-14652111 | MS.gene09258:CDS | 40.0% |
!! | CCAAAAGCTTCTGAAGTTTG+GGG | - | chr4.1:14655322-14655341 | None:intergenic | 40.0% |
!! | CCGCCTCTTCATTTTTATGA+TGG | - | chr4.1:14654065-14654084 | None:intergenic | 40.0% |
!! | CGAGCCTCTGAATTTTGATA+GGG | + | chr4.1:14652245-14652264 | MS.gene09258:CDS | 40.0% |
!! | GAGCCTCTGAATTTTGATAG+GGG | + | chr4.1:14652246-14652265 | MS.gene09258:CDS | 40.0% |
!! | GCTGATTTTACAGGTACATC+TGG | + | chr4.1:14654030-14654049 | MS.gene09258:intron | 40.0% |
!! | GGGGCTTTGAACAATTTCAA+AGG | - | chr4.1:14652615-14652634 | None:intergenic | 40.0% |
!! | TCTTCACTTTGAGATGGCAA+AGG | - | chr4.1:14654114-14654133 | None:intergenic | 40.0% |
!! | TGGTTGATTCTTTTTGCTGC+GGG | - | chr4.1:14651770-14651789 | None:intergenic | 40.0% |
!!! | CCTCAGCTGGGTTTTTTTTA+GGG | + | chr4.1:14653632-14653651 | MS.gene09258:intron | 40.0% |
AAAAACCCAAGAGGATGCAG+AGG | + | chr4.1:14655779-14655798 | MS.gene09258:CDS | 45.0% | |
AAAACCCAAGAGGATGCAGA+GGG | + | chr4.1:14655780-14655799 | MS.gene09258:CDS | 45.0% | |
AAAAGGAACAGGAACGGGAA+CGG | - | chr4.1:14651836-14651855 | None:intergenic | 45.0% | |
AAGAAGGTTATGGGAGGTCA+GGG | + | chr4.1:14652951-14652970 | MS.gene09258:CDS | 45.0% | |
AAGTTCACCAGCCACTATAG+TGG | - | chr4.1:14653678-14653697 | None:intergenic | 45.0% | |
ACAGATCAACTTGATGCCCT+TGG | + | chr4.1:14655728-14655747 | MS.gene09258:CDS | 45.0% | |
ACATGTGCAACGGAGCTAAT+TGG | + | chr4.1:14652754-14652773 | MS.gene09258:intron | 45.0% | |
ACCTGACTTCCATCCAAAAG+AGG | - | chr4.1:14655977-14655996 | None:intergenic | 45.0% | |
ACTTGAACCGGAACTGAGTA+TGG | - | chr4.1:14651790-14651809 | None:intergenic | 45.0% | |
AGCAGACAAATGACTGTCAG+TGG | + | chr4.1:14654144-14654163 | MS.gene09258:CDS | 45.0% | |
ATCAGCTTCCCGTGCAAATA+TGG | - | chr4.1:14653808-14653827 | None:intergenic | 45.0% | |
ATTGGTGAAGATGCCAGTTC+TGG | - | chr4.1:14653065-14653084 | None:intergenic | 45.0% | |
CAAAACACCAAGCTGCTCTA+AGG | - | chr4.1:14653297-14653316 | None:intergenic | 45.0% | |
CAACGGAGCTAATTGGCTAT+TGG | + | chr4.1:14652761-14652780 | MS.gene09258:intron | 45.0% | |
CCACAAAAAGGAACAGGAAC+GGG | - | chr4.1:14651841-14651860 | None:intergenic | 45.0% | |
CCCTAAAAAAAACCCAGCTG+AGG | - | chr4.1:14653635-14653654 | None:intergenic | 45.0% | |
CCTATAGTTGACTGAACCAG+GGG | - | chr4.1:14653836-14653855 | None:intergenic | 45.0% | |
CGAATTTATTCCCCACTTGC+CGG | + | chr4.1:14652039-14652058 | MS.gene09258:CDS | 45.0% | |
CTCCTATAGTTGACTGAACC+AGG | - | chr4.1:14653838-14653857 | None:intergenic | 45.0% | |
CTGAAACACCTGGATGTTGT+CGG | + | chr4.1:14655684-14655703 | MS.gene09258:CDS | 45.0% | |
CTGGTTCAGTCAACTATAGG+AGG | + | chr4.1:14653836-14653855 | MS.gene09258:CDS | 45.0% | |
GAAGACAAGAAGGTTATGGG+AGG | + | chr4.1:14652945-14652964 | MS.gene09258:CDS | 45.0% | |
GAAGAGGGTTCCTCTTGAAA+CGG | - | chr4.1:14651814-14651833 | None:intergenic | 45.0% | |
GACTGATCCTTGTTCCGTAA+TGG | + | chr4.1:14654404-14654423 | MS.gene09258:CDS | 45.0% | |
GAGAAATCACCTGAAACACC+TGG | + | chr4.1:14655674-14655693 | MS.gene09258:CDS | 45.0% | |
GAGTGAATCAAAGGTGGATC+TGG | + | chr4.1:14653151-14653170 | MS.gene09258:CDS | 45.0% | |
GATCCTATGGGTGATAGTAC+AGG | + | chr4.1:14655413-14655432 | MS.gene09258:CDS | 45.0% | |
GATCGGGAAGTAGCTGAATT+AGG | + | chr4.1:14652075-14652094 | MS.gene09258:CDS | 45.0% | |
GTGTTTATCTGTGCCATCTG+TGG | + | chr4.1:14653115-14653134 | MS.gene09258:CDS | 45.0% | |
TACAGGTACATCTGGTGATC+AGG | + | chr4.1:14654038-14654057 | MS.gene09258:intron | 45.0% | |
TCACACACCATTACGGAACA+AGG | - | chr4.1:14654414-14654433 | None:intergenic | 45.0% | |
TGATCCGAAATTCCCGCAAA+CGG | + | chr4.1:14651653-14651672 | MS.gene09258:CDS | 45.0% | |
TGATTTCTCCCTGTTGGACA+AGG | - | chr4.1:14655663-14655682 | None:intergenic | 45.0% | |
TGGAATTTCTCACCATAGGG+GGG | - | chr4.1:14656447-14656466 | None:intergenic | 45.0% | |
TGTTTCAGATGCTTTCCTGC+AGG | - | chr4.1:14656717-14656736 | None:intergenic | 45.0% | |
TTACCAGACACTGCAACACA+TGG | + | chr4.1:14654777-14654796 | MS.gene09258:CDS | 45.0% | |
TTCAGGTGATTTCTCCCTGT+TGG | - | chr4.1:14655669-14655688 | None:intergenic | 45.0% | |
TTTAGACTCTGAGCTTCAGG+AGG | - | chr4.1:14654603-14654622 | None:intergenic | 45.0% | |
TTTCTGGGTGCTAGAGATGT+TGG | + | chr4.1:14653182-14653201 | MS.gene09258:CDS | 45.0% | |
! | AACGACACTCCTCTTTTGGA+TGG | + | chr4.1:14655965-14655984 | MS.gene09258:CDS | 45.0% |
! | ATAGGACCTAAAGGTGTGAC+TGG | - | chr4.1:14655599-14655618 | None:intergenic | 45.0% |
! | CCCCAAACTTCAGAAGCTTT+TGG | + | chr4.1:14655319-14655338 | MS.gene09258:CDS | 45.0% |
! | GATCTGGCTGCAGATTTTCT+GGG | + | chr4.1:14653167-14653186 | MS.gene09258:CDS | 45.0% |
! | GGTTCAAGTTCCGTTTCAAG+AGG | + | chr4.1:14651801-14651820 | MS.gene09258:CDS | 45.0% |
! | TCAGAGTTAGCCTCAACAGA+GGG | - | chr4.1:14654339-14654358 | None:intergenic | 45.0% |
! | TCCTCTTTTGGATGGAAGTC+AGG | + | chr4.1:14655973-14655992 | MS.gene09258:CDS | 45.0% |
! | TCTGAGGTATGCTCTGCATT+TGG | - | chr4.1:14653385-14653404 | None:intergenic | 45.0% |
! | TGTCAACGACACTCCTCTTT+TGG | + | chr4.1:14655961-14655980 | MS.gene09258:CDS | 45.0% |
! | TTCTGGAAAATGGCAGTGTG+AGG | + | chr4.1:14652115-14652134 | MS.gene09258:CDS | 45.0% |
!! | GGAAAGATGGCAATTTTGGC+TGG | - | chr4.1:14654251-14654270 | None:intergenic | 45.0% |
!! | GTGTTTCTGGTCAGATCCAT+AGG | - | chr4.1:14653416-14653435 | None:intergenic | 45.0% |
!! | GTTGGTAATGCTTTCGACCA+CGG | + | chr4.1:14653200-14653219 | MS.gene09258:CDS | 45.0% |
!! | TCGCCGTTTTCAGCAATTGA+TGG | - | chr4.1:14652180-14652199 | None:intergenic | 45.0% |
!! | TTTTCGGGAACTAACGCCAA+GGG | - | chr4.1:14655747-14655766 | None:intergenic | 45.0% |
!!! | CCCTCAGCTGGGTTTTTTTT+AGG | + | chr4.1:14653631-14653650 | MS.gene09258:intron | 45.0% |
!! | TATATATATATTAGATATTA+TGG | + | chr4.1:14653992-14654011 | MS.gene09258:intron | 5.0% |
AAAGCCCTCTGCATCCTCTT+GGG | - | chr4.1:14655787-14655806 | None:intergenic | 50.0% | |
AAGGTCTTGGGCAACCTCTT+CGG | - | chr4.1:14655888-14655907 | None:intergenic | 50.0% | |
AATAAATTCGCCTCGCACGG+AGG | - | chr4.1:14652029-14652048 | None:intergenic | 50.0% | |
ACCATAGGGGGGACACTATA+GGG | - | chr4.1:14656436-14656455 | None:intergenic | 50.0% | |
ATACACCTGTGGATGATGCG+AGG | + | chr4.1:14652199-14652218 | MS.gene09258:CDS | 50.0% | |
CAAGAAGGTTATGGGAGGTC+AGG | + | chr4.1:14652950-14652969 | MS.gene09258:CDS | 50.0% | |
CCCCTGGTTCAGTCAACTAT+AGG | + | chr4.1:14653833-14653852 | MS.gene09258:CDS | 50.0% | |
CGACAACATCCAGGTGTTTC+AGG | - | chr4.1:14655686-14655705 | None:intergenic | 50.0% | |
CGATGTGAGGAATGTGGAAG+AGG | + | chr4.1:14652362-14652381 | MS.gene09258:CDS | 50.0% | |
CGTTCCGTTTGCGGGAATTT+CGG | - | chr4.1:14651660-14651679 | None:intergenic | 50.0% | |
CTTATCTGCACCCTCTGTTG+AGG | + | chr4.1:14654326-14654345 | MS.gene09258:CDS | 50.0% | |
CTTGGCGTTAGTTCCCGAAA+AGG | + | chr4.1:14655746-14655765 | MS.gene09258:CDS | 50.0% | |
GCACCATGGGTGATACCAAT+GGG | + | chr4.1:14653039-14653058 | MS.gene09258:CDS | 50.0% | |
GCTAAGGCTGCTGATCACAA+TGG | + | chr4.1:14653266-14653285 | MS.gene09258:CDS | 50.0% | |
GGAAAATGGCAGTGTGAGGA+CGG | + | chr4.1:14652119-14652138 | MS.gene09258:CDS | 50.0% | |
GGGAATAAATTCGCCTCGCA+CGG | - | chr4.1:14652032-14652051 | None:intergenic | 50.0% | |
GGTTCTCACCGGTGTAGTAT+TGG | - | chr4.1:14654919-14654938 | None:intergenic | 50.0% | |
GGTTGCCCAAGACCTTATGA+AGG | + | chr4.1:14655892-14655911 | MS.gene09258:CDS | 50.0% | |
GTAACCTGGGATGTCTTTGC+AGG | + | chr4.1:14653774-14653793 | MS.gene09258:intron | 50.0% | |
TACACCTGCCTTGTCCAACA+GGG | + | chr4.1:14655652-14655671 | MS.gene09258:CDS | 50.0% | |
TACTTCCCGATCAGAATCGC+CGG | - | chr4.1:14652067-14652086 | None:intergenic | 50.0% | |
TAGAAGCTAGCTGCGATGTG+AGG | + | chr4.1:14652349-14652368 | MS.gene09258:CDS | 50.0% | |
TAGCTGCGATGTGAGGAATG+TGG | + | chr4.1:14652356-14652375 | MS.gene09258:CDS | 50.0% | |
TCGGAGGAGTCTTGGAAAGA+TGG | - | chr4.1:14654264-14654283 | None:intergenic | 50.0% | |
TCTACCTTGTGCTACCACCA+AGG | + | chr4.1:14652002-14652021 | MS.gene09258:CDS | 50.0% | |
TGAAAACGGCGATACACCTG+TGG | + | chr4.1:14652188-14652207 | MS.gene09258:CDS | 50.0% | |
TGAACCTGCAAAGACATCCC+AGG | - | chr4.1:14653781-14653800 | None:intergenic | 50.0% | |
TGATACCAATGGGCCAGAAC+TGG | + | chr4.1:14653049-14653068 | MS.gene09258:CDS | 50.0% | |
TGCACCATGGGTGATACCAA+TGG | + | chr4.1:14653038-14653057 | MS.gene09258:CDS | 50.0% | |
TTCAGGTGAAAGAAGCCTGC+AGG | + | chr4.1:14656699-14656718 | MS.gene09258:intron | 50.0% | |
TTGATCCTCGCATCATCCAC+AGG | - | chr4.1:14652207-14652226 | None:intergenic | 50.0% | |
TTGGCAATTCGGAGGAGTCT+TGG | - | chr4.1:14654272-14654291 | None:intergenic | 50.0% | |
TTTGCTGCGGGAACTTGAAC+CGG | - | chr4.1:14651758-14651777 | None:intergenic | 50.0% | |
! | CCCGTTCCTGTTCCTTTTTG+TGG | + | chr4.1:14651838-14651857 | MS.gene09258:CDS | 50.0% |
! | CTCAGAGTTAGCCTCAACAG+AGG | - | chr4.1:14654340-14654359 | None:intergenic | 50.0% |
! | GGATCTGGCTGCAGATTTTC+TGG | + | chr4.1:14653166-14653185 | MS.gene09258:CDS | 50.0% |
!! | AGGTTCTAAATCGCTGCCCA+CGG | + | chr4.1:14655083-14655102 | MS.gene09258:intron | 50.0% |
!! | CTTTTCGGGAACTAACGCCA+AGG | - | chr4.1:14655748-14655767 | None:intergenic | 50.0% |
!!! | CTGCCATTTTCCAGAACCGA+CGG | - | chr4.1:14652111-14652130 | None:intergenic | 50.0% |
!!! | GTTTTATGCTCCGTCGGTTC+TGG | + | chr4.1:14652098-14652117 | MS.gene09258:CDS | 50.0% |
AACAGGAACGGGAACGGAAG+AGG | - | chr4.1:14651830-14651849 | None:intergenic | 55.0% | |
ACAGGAACGGGAACGGAAGA+GGG | - | chr4.1:14651829-14651848 | None:intergenic | 55.0% | |
AGATCGGACGTTCCGTTTGC+GGG | - | chr4.1:14651668-14651687 | None:intergenic | 55.0% | |
AGCTTTGCTGCGGGTGAATG+TGG | - | chr4.1:14651707-14651726 | None:intergenic | 55.0% | |
CAAAGCCCTCTGCATCCTCT+TGG | - | chr4.1:14655788-14655807 | None:intergenic | 55.0% | |
CACCATAGGGGGGACACTAT+AGG | - | chr4.1:14656437-14656456 | None:intergenic | 55.0% | |
CCACCATGTGTTGCAGTGTC+TGG | - | chr4.1:14654783-14654802 | None:intergenic | 55.0% | |
CCAGACACTGCAACACATGG+TGG | + | chr4.1:14654780-14654799 | MS.gene09258:CDS | 55.0% | |
GACAAGCTCCGACAACATCC+AGG | - | chr4.1:14655695-14655714 | None:intergenic | 55.0% | |
GACACTGCAACACATGGTGG+TGG | + | chr4.1:14654783-14654802 | MS.gene09258:CDS | 55.0% | |
GAGATCGGACGTTCCGTTTG+CGG | - | chr4.1:14651669-14651688 | None:intergenic | 55.0% | |
GGGAAGCTGATCAAAACCCC+TGG | + | chr4.1:14653817-14653836 | MS.gene09258:CDS | 55.0% | |
GTACACCTGCCTTGTCCAAC+AGG | + | chr4.1:14655651-14655670 | MS.gene09258:CDS | 55.0% | |
TCAGCTGCTAGATGCCGAAG+AGG | + | chr4.1:14655871-14655890 | MS.gene09258:CDS | 55.0% | |
TGGCCCATTGGTATCACCCA+TGG | - | chr4.1:14653045-14653064 | None:intergenic | 55.0% | |
TTCTCCCTGTTGGACAAGGC+AGG | - | chr4.1:14655659-14655678 | None:intergenic | 55.0% | |
! | AGATGCCAGTTCTGGCCCAT+TGG | - | chr4.1:14653057-14653076 | None:intergenic | 55.0% |
! | AGGTCCTTGGTGGTAGCACA+AGG | - | chr4.1:14652009-14652028 | None:intergenic | 55.0% |
! | GTTGCAGTGTCTGGTAACGC+AGG | - | chr4.1:14654774-14654793 | None:intergenic | 55.0% |
!! | GCTCCGTCGGTTCTGGAAAA+TGG | + | chr4.1:14652105-14652124 | MS.gene09258:CDS | 55.0% |
!! | GGTTCTAAATCGCTGCCCAC+GGG | + | chr4.1:14655084-14655103 | MS.gene09258:intron | 55.0% |
AAAGCTCACCGTACCCGCTC+CGG | + | chr4.1:14651721-14651740 | MS.gene09258:CDS | 60.0% | |
AATGTGGATGAGGCGGGTGG+CGG | - | chr4.1:14651691-14651710 | None:intergenic | 60.0% | |
CGGGTGAATGTGGATGAGGC+GGG | - | chr4.1:14651697-14651716 | None:intergenic | 60.0% | |
GCCCTATAGTGTCCCCCCTA+TGG | + | chr4.1:14656432-14656451 | MS.gene09258:intron | 60.0% | |
GCGGGTGAATGTGGATGAGG+CGG | - | chr4.1:14651698-14651717 | None:intergenic | 60.0% | |
GCTGCGGGTGAATGTGGATG+AGG | - | chr4.1:14651701-14651720 | None:intergenic | 60.0% | |
GGCTGTGCCTTAGAGCAGCT+TGG | + | chr4.1:14653287-14653306 | MS.gene09258:CDS | 60.0% | |
GGGTACGGTGAGCTTTGCTG+CGG | - | chr4.1:14651717-14651736 | None:intergenic | 60.0% | |
GGTACGGTGAGCTTTGCTGC+GGG | - | chr4.1:14651716-14651735 | None:intergenic | 60.0% | |
GTGAATGTGGATGAGGCGGG+TGG | - | chr4.1:14651694-14651713 | None:intergenic | 60.0% | |
TGAACCGGACCGGATCTGAC+CGG | - | chr4.1:14651743-14651762 | None:intergenic | 60.0% | |
TGCGGGAACTTGAACCGGAC+CGG | - | chr4.1:14651753-14651772 | None:intergenic | 60.0% | |
GGATCTGACCGGAGCGGGTA+CGG | - | chr4.1:14651732-14651751 | None:intergenic | 65.0% | |
GTACCCGCTCCGGTCAGATC+CGG | + | chr4.1:14651731-14651750 | MS.gene09258:CDS | 65.0% | |
TATTCCCCACTTGCCGGCGC+CGG | + | chr4.1:14652045-14652064 | MS.gene09258:CDS | 65.0% | |
!! | ATGAGGCGGGTGGCGGAGAT+CGG | - | chr4.1:14651684-14651703 | None:intergenic | 65.0% |
CCACCAAGGACCTCCGTGCG+AGG | + | chr4.1:14652016-14652035 | MS.gene09258:CDS | 70.0% | |
CCGATCAGAATCGCCGGCGC+CGG | - | chr4.1:14652061-14652080 | None:intergenic | 70.0% | |
CCTCGCACGGAGGTCCTTGG+TGG | - | chr4.1:14652019-14652038 | None:intergenic | 70.0% | |
CGCTCCGGTCAGATCCGGTC+CGG | + | chr4.1:14651736-14651755 | MS.gene09258:CDS | 70.0% | |
CGGACCGGATCTGACCGGAG+CGG | - | chr4.1:14651738-14651757 | None:intergenic | 70.0% | |
GGACCGGATCTGACCGGAGC+GGG | - | chr4.1:14651737-14651756 | None:intergenic | 70.0% | |
TCGCCTCGCACGGAGGTCCT+TGG | - | chr4.1:14652022-14652041 | None:intergenic | 70.0% | |
!! | AATCGCCGGCGCCGGCAAGT+GGG | - | chr4.1:14652053-14652072 | None:intergenic | 70.0% |
!! | CCGGCGCCGGCGATTCTGAT+CGG | + | chr4.1:14652058-14652077 | MS.gene09258:CDS | 70.0% |
!! | CGGCGCCGGCGATTCTGATC+GGG | + | chr4.1:14652059-14652078 | MS.gene09258:CDS | 70.0% |
!! | ATCGCCGGCGCCGGCAAGTG+GGG | - | chr4.1:14652052-14652071 | None:intergenic | 75.0% |
!! | GAATCGCCGGCGCCGGCAAG+TGG | - | chr4.1:14652054-14652073 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 14651646 | 14656957 | 14651646 | ID=MS.gene09258 |
chr4.1 | mRNA | 14651646 | 14656957 | 14651646 | ID=MS.gene09258.t1;Parent=MS.gene09258 |
chr4.1 | exon | 14651646 | 14652482 | 14651646 | ID=MS.gene09258.t1.exon1;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14651646 | 14652482 | 14651646 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14652594 | 14652684 | 14652594 | ID=MS.gene09258.t1.exon2;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14652594 | 14652684 | 14652594 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14652919 | 14653505 | 14652919 | ID=MS.gene09258.t1.exon3;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14652919 | 14653505 | 14652919 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14653796 | 14653898 | 14653796 | ID=MS.gene09258.t1.exon4;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14653796 | 14653898 | 14653796 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14654043 | 14654929 | 14654043 | ID=MS.gene09258.t1.exon5;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14654043 | 14654929 | 14654043 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14655085 | 14655187 | 14655085 | ID=MS.gene09258.t1.exon6;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14655085 | 14655187 | 14655085 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14655297 | 14655994 | 14655297 | ID=MS.gene09258.t1.exon7;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14655297 | 14655994 | 14655297 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14656704 | 14656802 | 14656704 | ID=MS.gene09258.t1.exon8;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14656704 | 14656802 | 14656704 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
chr4.1 | exon | 14656877 | 14656957 | 14656877 | ID=MS.gene09258.t1.exon9;Parent=MS.gene09258.t1 |
chr4.1 | CDS | 14656877 | 14656957 | 14656877 | ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1 |
Gene Sequence |
Protein sequence |