AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09258


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09258.t1 MTR_8g083310 90.488 1167 99 4 1 1157 1 1165 0.0 2093
MS.gene09258.t1 MTR_8g081060 58.462 65 7 1 361 425 227 271 6.29e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09258.t1 AT3G23740 33.528 343 181 9 842 1158 240 561 3.00e-37 149

Find 250 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGAAATTTCTGAATT+AGG 0.116328 4.1:+14652144 MS.gene09258:CDS
TCTTGGAAAGATGGCAATTT+TGG 0.194696 4.1:-14654252 None:intergenic
AGTGCTTTCTTGAGTGTTTC+TGG 0.194856 4.1:-14653426 None:intergenic
TTATTTCTCTCATGGGCTTT+GGG 0.201039 4.1:-14653464 None:intergenic
GATCGGGAAGTAGCTGAATT+AGG 0.204752 4.1:+14652075 MS.gene09258:CDS
TTGGGAAGATTCTTAAAATA+TGG 0.218302 4.1:-14653865 None:intergenic
CGACAACATCCAGGTGTTTC+AGG 0.234770 4.1:-14655683 None:intergenic
ATCCAAAAGCTTCTGAAGTT+TGG 0.240513 4.1:-14655321 None:intergenic
CTTCTGAATGGCCTAGTTAA+TGG 0.242037 4.1:+14654819 MS.gene09258:CDS
CAGCTGAAATTTCTGAATTA+GGG 0.242152 4.1:+14652145 MS.gene09258:CDS
GTTACATCGTTTCCACAAAA+AGG 0.243243 4.1:-14651850 None:intergenic
CCCCAAACTTCAGAAGCTTT+TGG 0.244143 4.1:+14655319 MS.gene09258:CDS
TCTTCAGCATCTAACATATT+AGG 0.253871 4.1:-14654633 None:intergenic
ATCAGCTTCCCGTGCAAATA+TGG 0.256177 4.1:-14653805 None:intergenic
TGTCAACGACACTCCTCTTT+TGG 0.257812 4.1:+14655961 MS.gene09258:CDS
CAACTATCAATCTTAGTTTC+AGG 0.258328 4.1:-14653017 None:intergenic
TGCAAGTTTGAATCTGAAAT+TGG 0.260828 4.1:-14655359 None:intergenic
ATTATTTCTCTCATGGGCTT+TGG 0.273531 4.1:-14653465 None:intergenic
GCTCCGTCGGTTCTGGAAAA+TGG 0.277936 4.1:+14652105 MS.gene09258:CDS
AAATCTCTATGAACAGAAAT+TGG 0.285206 4.1:-14655572 None:intergenic
GATTTACCAGTCACACCTTT+AGG 0.298769 4.1:+14655590 MS.gene09258:CDS
TCCAAAAGCTTCTGAAGTTT+GGG 0.301497 4.1:-14655320 None:intergenic
TGATTTAGACTCTGAGCTTC+AGG 0.305858 4.1:-14654603 None:intergenic
CGTTCCGTTTGCGGGAATTT+CGG 0.308084 4.1:-14651657 None:intergenic
GTGGTTACCATAGTCATCTT+TGG 0.316172 4.1:-14653884 None:intergenic
CAAGCTGTCAGATGAAGATT+TGG 0.331421 4.1:+14652275 MS.gene09258:CDS
TTATCTTGTAGTTGAGATCT+TGG 0.337870 4.1:-14655500 None:intergenic
AGATCGGACGTTCCGTTTGC+GGG 0.338738 4.1:-14651665 None:intergenic
TTGATCTGTGACTTTCATTT+CGG 0.339926 4.1:-14655714 None:intergenic
CAAAGCCCTCTGCATCCTCT+TGG 0.342184 4.1:-14655785 None:intergenic
GTCAAATTGTATTGGCAATT+CGG 0.344690 4.1:-14654280 None:intergenic
CAATCATTTGAATCACTTCC+AGG 0.354354 4.1:-14655389 None:intergenic
GAAATTTCTGAATTAGGGTT+TGG 0.356119 4.1:+14652150 MS.gene09258:CDS
GGTGATAGTACAGGAAATTC+TGG 0.363890 4.1:+14655422 MS.gene09258:CDS
AAAAGGAAGCAATAACAAAA+AGG 0.364259 4.1:+14654857 MS.gene09258:CDS
CGAATTTATTCCCCACTTGC+CGG 0.365212 4.1:+14652039 MS.gene09258:CDS
TCTGAGGTATGCTCTGCATT+TGG 0.369214 4.1:-14653382 None:intergenic
TCATGACAATGACCCAATTT+CGG 0.374046 4.1:-14652924 None:intergenic
TCATGAAGACAAGAAGGTTA+TGG 0.374927 4.1:+14652941 MS.gene09258:CDS
ATTCAATTACAAAAGGCTAA+TGG 0.376627 4.1:+14652641 MS.gene09258:CDS
TTTGCTGCGGGAACTTGAAC+CGG 0.379639 4.1:-14651755 None:intergenic
CAAGAAGGTTATGGGAGGTC+AGG 0.382245 4.1:+14652950 MS.gene09258:CDS
ATCGGGAAGTAGCTGAATTA+GGG 0.382557 4.1:+14652076 MS.gene09258:CDS
TCTTGAAACGGAACTTGAAC+CGG 0.382730 4.1:-14651799 None:intergenic
TTCCGAATCTGAAAGTCCTT+TGG 0.386134 4.1:-14651872 None:intergenic
AAGAAAGCAGTTTGTGAGTC+TGG 0.393914 4.1:+14654551 MS.gene09258:CDS
TTCAGATCGTGTTGAGGAAA+AGG 0.395076 4.1:+14656903 MS.gene09258:CDS
ACTTGAACCGGAACTGAGTA+TGG 0.396740 4.1:-14651787 None:intergenic
CAAAGTTGACTTGAATACTT+TGG 0.397446 4.1:+14654179 MS.gene09258:CDS
TTCAGGTGATTTCTCCCTGT+TGG 0.398168 4.1:-14655666 None:intergenic
TATCTTGTAGTTGAGATCTT+GGG 0.399426 4.1:-14655499 None:intergenic
AGCTCAGAGTCTAAATCAAT+TGG 0.402575 4.1:+14654608 MS.gene09258:CDS
CAAAACACCAAGCTGCTCTA+AGG 0.402756 4.1:-14653294 None:intergenic
CATGAAGACAAGAAGGTTAT+GGG 0.402943 4.1:+14652942 MS.gene09258:CDS
GTACACCTGCCTTGTCCAAC+AGG 0.404686 4.1:+14655651 MS.gene09258:CDS
ATACTTCCTTCATAAGGTCT+TGG 0.405275 4.1:-14655898 None:intergenic
TGAGTGGATTATTTCTCTCA+TGG 0.406884 4.1:-14653472 None:intergenic
TTTATAGGAATACCGAAATT+GGG 0.406959 4.1:+14652912 MS.gene09258:intron
TACAGGTACATCTGGTGATC+AGG 0.410151 4.1:+14654038 MS.gene09258:intron
AAAGCCCTCTGCATCCTCTT+GGG 0.411441 4.1:-14655784 None:intergenic
CGAAGATGACGATCTTGTTA+AGG 0.411660 4.1:+14651945 MS.gene09258:CDS
TTAAGCAAGATTCTTTCAAC+AGG 0.411745 4.1:+14653228 MS.gene09258:CDS
AAAGGAGTTCTCGAGATAGT+AGG 0.415123 4.1:-14655543 None:intergenic
CAAAAGGCTAATGGATGCTA+TGG 0.417412 4.1:+14652650 MS.gene09258:CDS
CTCCTATAGTTGACTGAACC+AGG 0.418077 4.1:-14653835 None:intergenic
CCTACACAGATGACATCATT+AGG 0.419553 4.1:-14652324 None:intergenic
GAGTGAATCAAAGGTGGATC+TGG 0.420859 4.1:+14653151 MS.gene09258:CDS
TGTTTCAGATGCTTTCCTGC+AGG 0.422230 4.1:-14656714 None:intergenic
TGGTTACCATAGTCATCTTT+GGG 0.422943 4.1:-14653883 None:intergenic
TACTTCCTTCATAAGGTCTT+GGG 0.428201 4.1:-14655897 None:intergenic
GATGCTATGGGAGATAATTT+CGG 0.429372 4.1:+14652663 MS.gene09258:CDS
ACAATTTGACGCAAAAGAAA+TGG 0.430175 4.1:+14654293 MS.gene09258:CDS
AATCTTCCCAAAGATGACTA+TGG 0.436351 4.1:+14653877 MS.gene09258:CDS
CCACCATGTGTTGCAGTGTC+TGG 0.438116 4.1:-14654780 None:intergenic
GTGTTTCTGGTCAGATCCAT+AGG 0.442538 4.1:-14653413 None:intergenic
TGTTAAGATCATCATTCATC+TGG 0.443214 4.1:-14656763 None:intergenic
ATTTCAGTATCACGAGTCAT+TGG 0.444093 4.1:-14653332 None:intergenic
TTCAAATGATTGTGATCCTA+TGG 0.444913 4.1:+14655400 MS.gene09258:CDS
TGATACCAATGGGCCAGAAC+TGG 0.447913 4.1:+14653049 MS.gene09258:CDS
ATGAGGCGGGTGGCGGAGAT+CGG 0.451393 4.1:-14651681 None:intergenic
TTCTCCCTGTTGGACAAGGC+AGG 0.452781 4.1:-14655656 None:intergenic
GAATCAACCATACTCAGTTC+CGG 0.453096 4.1:+14651780 MS.gene09258:CDS
CCGGCGCCGGCGATTCTGAT+CGG 0.453266 4.1:+14652058 MS.gene09258:CDS
AAGGTCTTGGGCAACCTCTT+CGG 0.453280 4.1:-14655885 None:intergenic
ATTGGTGAAGATGCCAGTTC+TGG 0.453428 4.1:-14653062 None:intergenic
AATGTGGATGAGGCGGGTGG+CGG 0.453864 4.1:-14651688 None:intergenic
GGTTCTCACCGGTGTAGTAT+TGG 0.455125 4.1:-14654916 None:intergenic
TATTCCCCACTTGCCGGCGC+CGG 0.457589 4.1:+14652045 MS.gene09258:CDS
CGGCGCCGGCGATTCTGATC+GGG 0.457703 4.1:+14652059 MS.gene09258:CDS
TCGCCTCGCACGGAGGTCCT+TGG 0.459092 4.1:-14652019 None:intergenic
TTGGCAATTCGGAGGAGTCT+TGG 0.461511 4.1:-14654269 None:intergenic
CTAACAACATGTTTCTGAGA+TGG 0.462834 4.1:-14655922 None:intergenic
GTGACAACTTGATCAGCTAT+AGG 0.464581 4.1:-14655614 None:intergenic
TTTGAGATGGCAAAGGAAGT+TGG 0.468342 4.1:-14654104 None:intergenic
CAAATGCTCTTTCTGCATGA+AGG 0.468866 4.1:-14655835 None:intergenic
GAGATCGGACGTTCCGTTTG+CGG 0.472640 4.1:-14651666 None:intergenic
CTTAACAAGATCGTCATCTT+CGG 0.472983 4.1:-14651944 None:intergenic
CAGGTTCATTCAATTACAAA+AGG 0.473778 4.1:+14652634 MS.gene09258:CDS
CCGATCAGAATCGCCGGCGC+CGG 0.477749 4.1:-14652058 None:intergenic
TTTCTGGGTGCTAGAGATGT+TGG 0.478007 4.1:+14653182 MS.gene09258:CDS
TTGAAATTGTTCAAAGCCCC+AGG 0.478616 4.1:+14652615 MS.gene09258:CDS
TAACAACATGTTTCTGAGAT+GGG 0.479696 4.1:-14655921 None:intergenic
ACCTCAGAATGTCAAACCTA+TGG 0.482063 4.1:+14653397 MS.gene09258:CDS
AAAGCTCACCGTACCCGCTC+CGG 0.482065 4.1:+14651721 MS.gene09258:CDS
TTCTCAGTATCTACTTGCAT+TGG 0.482411 4.1:-14653080 None:intergenic
TCAAACTTGCAAGTAACTCC+TGG 0.489368 4.1:+14655371 MS.gene09258:CDS
AATCTTATCACACACCATTA+CGG 0.491836 4.1:-14654418 None:intergenic
GATGGGATACTTCCTTCATA+AGG 0.492449 4.1:-14655904 None:intergenic
GAGTGGATTATTTCTCTCAT+GGG 0.495906 4.1:-14653471 None:intergenic
CTTACATGTTTGCTCTTGAG+TGG 0.497544 4.1:-14653488 None:intergenic
AAGCTGTCAGATGAAGATTT+GGG 0.498032 4.1:+14652276 MS.gene09258:CDS
CGGGTGAATGTGGATGAGGC+GGG 0.499168 4.1:-14651694 None:intergenic
AACCAAAGGACTTTCAGATT+CGG 0.499438 4.1:+14651870 MS.gene09258:CDS
AACAGGAACGGGAACGGAAG+AGG 0.499995 4.1:-14651827 None:intergenic
CGATCTGAAAACTTAACACT+TGG 0.500039 4.1:-14656889 None:intergenic
ACCTGACTTCCATCCAAAAG+AGG 0.501538 4.1:-14655974 None:intergenic
TCGGAGGAGTCTTGGAAAGA+TGG 0.504525 4.1:-14654261 None:intergenic
TGATCAGCTATAGGACCTAA+AGG 0.507484 4.1:-14655605 None:intergenic
CCATGAGATGACATATTAGC+AGG 0.510296 4.1:-14654222 None:intergenic
TTGACATCTGATAATCATGA+AGG 0.512397 4.1:+14652987 MS.gene09258:CDS
CGCTCCGGTCAGATCCGGTC+CGG 0.514035 4.1:+14651736 MS.gene09258:CDS
CAAATCTTCATCTGACAGCT+TGG 0.516191 4.1:-14652274 None:intergenic
GGTTCAAAGATGCCTTCAAA+AGG 0.517017 4.1:+14654840 MS.gene09258:CDS
TTCAGGTGAAAGAAGCCTGC+AGG 0.518152 4.1:+14656699 MS.gene09258:intron
ACTAGATTCTTCATTTGAGA+TGG 0.520142 4.1:-14654718 None:intergenic
TATTTCTCTCATGGGCTTTG+GGG 0.520188 4.1:-14653463 None:intergenic
AATCGCCGGCGCCGGCAAGT+GGG 0.521074 4.1:-14652050 None:intergenic
CCCCTGGTTCAGTCAACTAT+AGG 0.521818 4.1:+14653833 MS.gene09258:CDS
TCGCCATCAATTGCTGAAAA+CGG 0.522563 4.1:+14652174 MS.gene09258:CDS
GCACCATGGGTGATACCAAT+GGG 0.525467 4.1:+14653039 MS.gene09258:CDS
GAATCGCCGGCGCCGGCAAG+TGG 0.526594 4.1:-14652051 None:intergenic
CTTGGCGTTAGTTCCCGAAA+AGG 0.530408 4.1:+14655746 MS.gene09258:CDS
CCTCGCACGGAGGTCCTTGG+TGG 0.530427 4.1:-14652016 None:intergenic
GACTGATCCTTGTTCCGTAA+TGG 0.533682 4.1:+14654404 MS.gene09258:CDS
CATCATTCAAGCAATGAGAA+AGG 0.534669 4.1:+14654519 MS.gene09258:CDS
TCCATAGGTTTGACATTCTG+AGG 0.534755 4.1:-14653398 None:intergenic
GAAGAGGGTTCCTCTTGAAA+CGG 0.536043 4.1:-14651811 None:intergenic
CTGAAACACCTGGATGTTGT+CGG 0.536845 4.1:+14655684 MS.gene09258:CDS
TGCGGGAACTTGAACCGGAC+CGG 0.537490 4.1:-14651750 None:intergenic
TTCATAAACCATATTTGCAC+GGG 0.537606 4.1:+14653797 MS.gene09258:CDS
GTACCCGCTCCGGTCAGATC+CGG 0.538113 4.1:+14651731 MS.gene09258:CDS
GGGAATAAATTCGCCTCGCA+CGG 0.538413 4.1:-14652029 None:intergenic
TGGCCCATTGGTATCACCCA+TGG 0.538471 4.1:-14653042 None:intergenic
GGACCGGATCTGACCGGAGC+GGG 0.538597 4.1:-14651734 None:intergenic
CCTGCTAATATGTCATCTCA+TGG 0.541971 4.1:+14654222 MS.gene09258:CDS
GAAGCTTCTTCACTTTGAGA+TGG 0.542689 4.1:-14654117 None:intergenic
GGATCTGACCGGAGCGGGTA+CGG 0.543526 4.1:-14651729 None:intergenic
AGCTTTGCTGCGGGTGAATG+TGG 0.543562 4.1:-14651704 None:intergenic
ACAGATCAACTTGATGCCCT+TGG 0.544853 4.1:+14655728 MS.gene09258:CDS
TGTGATGATATTGTGCTCAA+TGG 0.546109 4.1:+14653356 MS.gene09258:CDS
TGATTTCTCCCTGTTGGACA+AGG 0.546492 4.1:-14655660 None:intergenic
TGATCCGAAATTCCCGCAAA+CGG 0.547137 4.1:+14651653 MS.gene09258:CDS
ACAGGAACGGGAACGGAAGA+GGG 0.547351 4.1:-14651826 None:intergenic
GCGGGTGAATGTGGATGAGG+CGG 0.548554 4.1:-14651695 None:intergenic
GATCCTATGGGTGATAGTAC+AGG 0.549573 4.1:+14655413 MS.gene09258:CDS
AAGATTGATAGTTGCACCAT+GGG 0.550130 4.1:+14653026 MS.gene09258:CDS
TGTGATAAGATTGTCACAAA+TGG 0.552424 4.1:+14654429 MS.gene09258:CDS
AAGGAGTTCTCGAGATAGTA+GGG 0.552552 4.1:-14655542 None:intergenic
TATTCAAGTCAACTTTGTCA+TGG 0.552776 4.1:-14654173 None:intergenic
AGTTGTCACTAGAGAAGAAG+TGG 0.553740 4.1:+14655628 MS.gene09258:CDS
GGCTGTGCCTTAGAGCAGCT+TGG 0.560567 4.1:+14653287 MS.gene09258:CDS
ATAGGACCTAAAGGTGTGAC+TGG 0.561769 4.1:-14655596 None:intergenic
GTAGATACTGAGAAAGTGAA+TGG 0.563342 4.1:+14653089 MS.gene09258:CDS
GGAATTTCGGATCACGTCCA+TGG 0.563873 4.1:-14651644 None:intergenic
GGTTCTAAATCGCTGCCCAC+GGG 0.564160 4.1:+14655084 MS.gene09258:intron
GCATCTTTGAACCATTAACT+AGG 0.564566 4.1:-14654830 None:intergenic
CCTAATGATGTCATCTGTGT+AGG 0.564732 4.1:+14652324 MS.gene09258:CDS
GTGTTTATCTGTGCCATCTG+TGG 0.564797 4.1:+14653115 MS.gene09258:CDS
TGCACCATGGGTGATACCAA+TGG 0.565398 4.1:+14653038 MS.gene09258:CDS
GACAAGCTCCGACAACATCC+AGG 0.565824 4.1:-14655692 None:intergenic
TTGATCCTCGCATCATCCAC+AGG 0.565826 4.1:-14652204 None:intergenic
AAAAGGAACAGGAACGGGAA+CGG 0.566531 4.1:-14651833 None:intergenic
AAGAAGGTTATGGGAGGTCA+GGG 0.566531 4.1:+14652951 MS.gene09258:CDS
ATGATGCTCAAATGAAAGGT+TGG 0.567253 4.1:-14654502 None:intergenic
TACTTCCCGATCAGAATCGC+CGG 0.567923 4.1:-14652064 None:intergenic
TTGAATGATGCTCAAATGAA+AGG 0.568241 4.1:-14654506 None:intergenic
GTTCATAAACCATATTTGCA+CGG 0.569319 4.1:+14653796 MS.gene09258:CDS
AGGTTCTAAATCGCTGCCCA+CGG 0.570248 4.1:+14655083 MS.gene09258:intron
CGATGTGAGGAATGTGGAAG+AGG 0.571374 4.1:+14652362 MS.gene09258:CDS
CTTATCTGCACCCTCTGTTG+AGG 0.573087 4.1:+14654326 MS.gene09258:CDS
GATAAGATTGTCACAAATGG+TGG 0.573529 4.1:+14654432 MS.gene09258:CDS
AGATGCCAGTTCTGGCCCAT+TGG 0.574730 4.1:-14653054 None:intergenic
GGAAAATGGCAGTGTGAGGA+CGG 0.575753 4.1:+14652119 MS.gene09258:CDS
ATCGCCGGCGCCGGCAAGTG+GGG 0.577299 4.1:-14652049 None:intergenic
AACAGAAATTGGTGAAACAA+AGG 0.578081 4.1:-14655561 None:intergenic
GTGAATGTGGATGAGGCGGG+TGG 0.579031 4.1:-14651691 None:intergenic
GGTACGGTGAGCTTTGCTGC+GGG 0.582951 4.1:-14651713 None:intergenic
TCTTCACTTTGAGATGGCAA+AGG 0.583276 4.1:-14654111 None:intergenic
GGGGCTTTGAACAATTTCAA+AGG 0.583740 4.1:-14652612 None:intergenic
GTTGGTAATGCTTTCGACCA+CGG 0.584626 4.1:+14653200 MS.gene09258:CDS
TCACACACCATTACGGAACA+AGG 0.589266 4.1:-14654411 None:intergenic
AAAAGGCTAATGGATGCTAT+GGG 0.591299 4.1:+14652651 MS.gene09258:CDS
TTTGTAATTGAATGAACCTG+GGG 0.594391 4.1:-14652631 None:intergenic
TGTGGAAACGATGTAACCAA+AGG 0.595525 4.1:+14651856 MS.gene09258:CDS
TGAAACAGAACAACTTGCAA+AGG 0.595999 4.1:+14656730 MS.gene09258:CDS
GAATCTGAAATTGGCAGAAG+TGG 0.596355 4.1:-14655350 None:intergenic
GGTTCAAGTTCCGTTTCAAG+AGG 0.600363 4.1:+14651801 MS.gene09258:CDS
GCTGCGGGTGAATGTGGATG+AGG 0.602043 4.1:-14651698 None:intergenic
GGGAAGCTGATCAAAACCCC+TGG 0.602371 4.1:+14653817 MS.gene09258:CDS
TGAACCGGACCGGATCTGAC+CGG 0.603361 4.1:-14651740 None:intergenic
GAATAATCTTGACTGTGCTA+AGG 0.603599 4.1:+14653250 MS.gene09258:CDS
CCACCAAGGACCTCCGTGCG+AGG 0.606940 4.1:+14652016 MS.gene09258:CDS
TCAGAGTTAGCCTCAACAGA+GGG 0.608322 4.1:-14654336 None:intergenic
TCATTGTCATGAAGACAAGA+AGG 0.608420 4.1:+14652935 MS.gene09258:CDS
GACACTGCAACACATGGTGG+TGG 0.614063 4.1:+14654783 MS.gene09258:CDS
GAGAAATCACCTGAAACACC+TGG 0.614071 4.1:+14655674 MS.gene09258:CDS
AGGTCCTTGGTGGTAGCACA+AGG 0.615884 4.1:-14652006 None:intergenic
TTCTGGAAAATGGCAGTGTG+AGG 0.618228 4.1:+14652115 MS.gene09258:CDS
CTGGTTCAGTCAACTATAGG+AGG 0.621061 4.1:+14653836 MS.gene09258:CDS
GGGTACGGTGAGCTTTGCTG+CGG 0.621821 4.1:-14651714 None:intergenic
GGTTGCCCAAGACCTTATGA+AGG 0.622380 4.1:+14655892 MS.gene09258:CDS
TAAATGCTTGAGTGAATCAA+AGG 0.622735 4.1:+14653142 MS.gene09258:CDS
AGCAGACAAATGACTGTCAG+TGG 0.623587 4.1:+14654144 MS.gene09258:CDS
ATGCTTGAGTGAATCAAAGG+TGG 0.624188 4.1:+14653145 MS.gene09258:CDS
CCAAAAGCTTCTGAAGTTTG+GGG 0.630512 4.1:-14655319 None:intergenic
TCAGCTGCTAGATGCCGAAG+AGG 0.631980 4.1:+14655871 MS.gene09258:CDS
GTAGCTGAAAATTCAAGCGA+GGG 0.632081 4.1:+14652426 MS.gene09258:CDS
TAGAAGCTAGCTGCGATGTG+AGG 0.635076 4.1:+14652349 MS.gene09258:CDS
CTCAGAGTTAGCCTCAACAG+AGG 0.638818 4.1:-14654337 None:intergenic
CCTATAGTTGACTGAACCAG+GGG 0.639145 4.1:-14653833 None:intergenic
TTTAGACTCTGAGCTTCAGG+AGG 0.640447 4.1:-14654600 None:intergenic
TGTAGCTGAAAATTCAAGCG+AGG 0.644391 4.1:+14652425 MS.gene09258:CDS
AACAATTTCAAAGGTAAACG+CGG 0.645334 4.1:-14652603 None:intergenic
TTACCAGACACTGCAACACA+TGG 0.645552 4.1:+14654777 MS.gene09258:CDS
TCAAATGATTGTGATCCTAT+GGG 0.646538 4.1:+14655401 MS.gene09258:CDS
TTTCCTGTACTATCACCCAT+AGG 0.646734 4.1:-14655416 None:intergenic
TCATGATTATCAGATGTCAA+AGG 0.647040 4.1:-14652984 None:intergenic
TAAGATTGATAGTTGCACCA+TGG 0.648864 4.1:+14653025 MS.gene09258:CDS
TACACCTGCCTTGTCCAACA+GGG 0.649992 4.1:+14655652 MS.gene09258:CDS
AAATTGTATTGGCAATTCGG+AGG 0.653709 4.1:-14654277 None:intergenic
AAGCATTTATCATCCACAGA+TGG 0.656457 4.1:-14653128 None:intergenic
AAAACCCAAGAGGATGCAGA+GGG 0.661927 4.1:+14655780 MS.gene09258:CDS
AGAGGCGGATTTATATGCAA+AGG 0.665530 4.1:+14654077 MS.gene09258:CDS
TCCTATAGTTGACTGAACCA+GGG 0.668929 4.1:-14653834 None:intergenic
GCTAAGGCTGCTGATCACAA+TGG 0.673146 4.1:+14653266 MS.gene09258:CDS
ATACACCTGTGGATGATGCG+AGG 0.679193 4.1:+14652199 MS.gene09258:CDS
TTTGGAATCCAATACTACAC+CGG 0.686242 4.1:+14654908 MS.gene09258:CDS
ATTCCCCTATCAAAATTCAG+AGG 0.686862 4.1:-14652249 None:intergenic
ATAAGATTGTCACAAATGGT+GGG 0.687693 4.1:+14654433 MS.gene09258:CDS
AATAAATTCGCCTCGCACGG+AGG 0.688523 4.1:-14652026 None:intergenic
GTTGCAGTGTCTGGTAACGC+AGG 0.694475 4.1:-14654771 None:intergenic
GTTGTCACTAGAGAAGAAGT+GGG 0.694605 4.1:+14655629 MS.gene09258:CDS
TCTACCTTGTGCTACCACCA+AGG 0.697929 4.1:+14652002 MS.gene09258:CDS
GAAGACAAGAAGGTTATGGG+AGG 0.705451 4.1:+14652945 MS.gene09258:CDS
CCAGACACTGCAACACATGG+TGG 0.710994 4.1:+14654780 MS.gene09258:CDS
TGAAAACGGCGATACACCTG+TGG 0.720243 4.1:+14652188 MS.gene09258:CDS
ACACAGATGACATCATTAGG+TGG 0.722388 4.1:-14652321 None:intergenic
TAGCTGCGATGTGAGGAATG+TGG 0.763594 4.1:+14652356 MS.gene09258:CDS
CGGACCGGATCTGACCGGAG+CGG 0.781159 4.1:-14651735 None:intergenic
AATCTTGCTTAACATCACCG+TGG 0.800564 4.1:-14653217 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACAAATTGTTTATT+TGG - chr4.1:14656840-14656859 None:intergenic 10.0%
!!! ATAAGTTTAGTTTTAAAAAA+CGG - chr4.1:14655266-14655285 None:intergenic 10.0%
!!! TTATTTTTCATTTTTTTGAT+TGG + chr4.1:14655238-14655257 MS.gene09258:intron 10.0%
!!! TTTTTTATTTGAATATTTTC+AGG + chr4.1:14656682-14656701 MS.gene09258:intron 10.0%
!! ATTCAATCAATAAATAACAA+AGG - chr4.1:14652830-14652849 None:intergenic 15.0%
!! ATTTAAATAACCAAACTTAT+CGG - chr4.1:14656175-14656194 None:intergenic 15.0%
!! TGATGAAAATAAAAATTGAA+AGG - chr4.1:14652492-14652511 None:intergenic 15.0%
!!! TGATATAAATTTATTTTCTC+AGG + chr4.1:14656320-14656339 MS.gene09258:intron 15.0%
!! AATTATATATCATGTAACCT+GGG + chr4.1:14653761-14653780 MS.gene09258:intron 20.0%
!! ATAAAATGATCAGAAAAGAA+AGG - chr4.1:14656046-14656065 None:intergenic 20.0%
!! GATATATACACAAAAGATTA+TGG - chr4.1:14654940-14654959 None:intergenic 20.0%
!! GCAAAATATTATAAACTTGT+CGG - chr4.1:14656374-14656393 None:intergenic 20.0%
!! TAAACAAATTGTTTATTTGG+AGG - chr4.1:14656837-14656856 None:intergenic 20.0%
!! TAATGTAGCATAAAAATAAG+AGG + chr4.1:14656635-14656654 MS.gene09258:intron 20.0%
!! TGAAATGAAATAATAGTGAA+AGG - chr4.1:14656216-14656235 None:intergenic 20.0%
!! TGCAAACAACTAAATAATAA+AGG - chr4.1:14652710-14652729 None:intergenic 20.0%
!! TTAATATTGTATTGCATAAG+TGG - chr4.1:14653921-14653940 None:intergenic 20.0%
!!! ACTAAACTTATACTACTTTT+AGG + chr4.1:14655275-14655294 MS.gene09258:intron 20.0%
!!! AGTATTGGTTTTTATTCTAT+TGG + chr4.1:14655191-14655210 MS.gene09258:intron 20.0%
!!! ATGAAATTTTGTTAGTTGAT+TGG + chr4.1:14652558-14652577 MS.gene09258:intron 20.0%
!!! ATTAAGCAAATTTTGTTCTT+TGG - chr4.1:14654466-14654485 None:intergenic 20.0%
!!! TAACCATTTTTTAATCTGTT+TGG - chr4.1:14656937-14656956 None:intergenic 20.0%
!!! TTAAGCAAATTTTGTTCTTT+GGG - chr4.1:14654465-14654484 None:intergenic 20.0%
!!! TTAAGTTTTTAAAACATGCT+GGG + chr4.1:14655107-14655126 MS.gene09258:CDS 20.0%
!!! TTTTTCTCAAAATTCCTTTT+CGG - chr4.1:14655763-14655782 None:intergenic 20.0%
! AAAAAAATGGCAAAGTTACT+TGG - chr4.1:14656467-14656486 None:intergenic 25.0%
! AAAAGGAAGCAATAACAAAA+AGG + chr4.1:14654857-14654876 MS.gene09258:CDS 25.0%
! AAAGAAAAAAGTCTTCTGAA+TGG + chr4.1:14654807-14654826 MS.gene09258:CDS 25.0%
! AAATCTCTATGAACAGAAAT+TGG - chr4.1:14655575-14655594 None:intergenic 25.0%
! AACCAAATTGACATTGTATT+AGG - chr4.1:14653608-14653627 None:intergenic 25.0%
! AGTAGAAAAACAGTCAAATA+AGG - chr4.1:14656523-14656542 None:intergenic 25.0%
! ATAAAACCTCAAGTAAATTC+TGG + chr4.1:14656410-14656429 MS.gene09258:intron 25.0%
! ATTCAATTACAAAAGGCTAA+TGG + chr4.1:14652641-14652660 MS.gene09258:CDS 25.0%
! CAACCAAACAGATTAAAAAA+TGG + chr4.1:14656931-14656950 MS.gene09258:CDS 25.0%
! CAATTATATATCATGTAACC+TGG + chr4.1:14653760-14653779 MS.gene09258:intron 25.0%
! CTGAATTTATTAAGTTACAC+GGG - chr4.1:14656582-14656601 None:intergenic 25.0%
! GAATAAAAACCAATACTTAC+AGG - chr4.1:14655188-14655207 None:intergenic 25.0%
! GCTGAATTTATTAAGTTACA+CGG - chr4.1:14656583-14656602 None:intergenic 25.0%
! TACCTAATACAATGTCAATT+TGG + chr4.1:14653603-14653622 MS.gene09258:intron 25.0%
! TATAATCAATGAGAAAGAGA+GGG - chr4.1:14654994-14655013 None:intergenic 25.0%
! TGACAATATATGCATATACA+TGG + chr4.1:14653722-14653741 MS.gene09258:intron 25.0%
! TTATAATCAATGAGAAAGAG+AGG - chr4.1:14654995-14655014 None:intergenic 25.0%
! TTGACATTGTATTAGGTATT+AGG - chr4.1:14653601-14653620 None:intergenic 25.0%
! TTGGGAAGATTCTTAAAATA+TGG - chr4.1:14653868-14653887 None:intergenic 25.0%
! TTTATAGGAATACCGAAATT+GGG + chr4.1:14652912-14652931 MS.gene09258:intron 25.0%
!! AATTGGCATCGTAATTTTAT+AGG + chr4.1:14652897-14652916 MS.gene09258:intron 25.0%
!! TATTTGGAGGAACAAATTTT+GGG - chr4.1:14656824-14656843 None:intergenic 25.0%
!! TTATTTGGAGGAACAAATTT+TGG - chr4.1:14656825-14656844 None:intergenic 25.0%
!! TTCTCATTTTCCAACAAAAT+CGG - chr4.1:14655157-14655176 None:intergenic 25.0%
!! TTGATCAAGTAATTTTGAAC+AGG + chr4.1:14655063-14655082 MS.gene09258:intron 25.0%
!! TTTTATAGGAATACCGAAAT+TGG + chr4.1:14652911-14652930 MS.gene09258:intron 25.0%
!! TTTTCTCAAAATTCCTTTTC+GGG - chr4.1:14655762-14655781 None:intergenic 25.0%
!! TTTTGTAATTGAATGAACCT+GGG - chr4.1:14652635-14652654 None:intergenic 25.0%
!!! ATACATGGTTTTGTATTTGT+TGG + chr4.1:14653737-14653756 MS.gene09258:intron 25.0%
!!! ATTTAGTTTTACATGTGCAA+CGG + chr4.1:14652744-14652763 MS.gene09258:intron 25.0%
!!! CTTGAGGTTTTATTTCTAAA+TGG - chr4.1:14656403-14656422 None:intergenic 25.0%
!!! GTTAAGTTTTTAAAACATGC+TGG + chr4.1:14655106-14655125 MS.gene09258:CDS 25.0%
AACAATTTCAAAGGTAAACG+CGG - chr4.1:14652606-14652625 None:intergenic 30.0%
AACAGAAATTGGTGAAACAA+AGG - chr4.1:14655564-14655583 None:intergenic 30.0%
AATCTTATCACACACCATTA+CGG - chr4.1:14654421-14654440 None:intergenic 30.0%
ACAATTTGACGCAAAAGAAA+TGG + chr4.1:14654293-14654312 MS.gene09258:CDS 30.0%
ACTAGATTCTTCATTTGAGA+TGG - chr4.1:14654721-14654740 None:intergenic 30.0%
AGTCTAATTCCTGTAAGTAT+TGG + chr4.1:14655176-14655195 MS.gene09258:intron 30.0%
ATAAGATTGTCACAAATGGT+GGG + chr4.1:14654433-14654452 MS.gene09258:CDS 30.0%
ATAATCAATGAGAAAGAGAG+GGG - chr4.1:14654993-14655012 None:intergenic 30.0%
ATAGTCATATCAACATCATG+TGG - chr4.1:14656005-14656024 None:intergenic 30.0%
ATTATCTCATCCGATAAGTT+TGG + chr4.1:14656162-14656181 MS.gene09258:intron 30.0%
CAACTATCAATCTTAGTTTC+AGG - chr4.1:14653020-14653039 None:intergenic 30.0%
CAGCTGAAATTTCTGAATTA+GGG + chr4.1:14652145-14652164 MS.gene09258:CDS 30.0%
CAGGTTCATTCAATTACAAA+AGG + chr4.1:14652634-14652653 MS.gene09258:CDS 30.0%
CTTCACGATAATAACTGAAA+TGG + chr4.1:14656070-14656089 MS.gene09258:intron 30.0%
GAAATTTCTGAATTAGGGTT+TGG + chr4.1:14652150-14652169 MS.gene09258:CDS 30.0%
GGTCAAATGCACTAAAAAAA+TGG - chr4.1:14656480-14656499 None:intergenic 30.0%
GTTCATAAACCATATTTGCA+CGG + chr4.1:14653796-14653815 MS.gene09258:CDS 30.0%
TAAATGCTTGAGTGAATCAA+AGG + chr4.1:14653142-14653161 MS.gene09258:CDS 30.0%
TAATAGTGAAAGGAATTGCA+AGG - chr4.1:14656206-14656225 None:intergenic 30.0%
TATCTTGTAGTTGAGATCTT+GGG - chr4.1:14655502-14655521 None:intergenic 30.0%
TATTCAAGTCAACTTTGTCA+TGG - chr4.1:14654176-14654195 None:intergenic 30.0%
TCAAATGATTGTGATCCTAT+GGG + chr4.1:14655401-14655420 MS.gene09258:CDS 30.0%
TCAGCTGAAATTTCTGAATT+AGG + chr4.1:14652144-14652163 MS.gene09258:CDS 30.0%
TCATGATTATCAGATGTCAA+AGG - chr4.1:14652987-14653006 None:intergenic 30.0%
TCTTCAGCATCTAACATATT+AGG - chr4.1:14654636-14654655 None:intergenic 30.0%
TGTGATAAGATTGTCACAAA+TGG + chr4.1:14654429-14654448 MS.gene09258:CDS 30.0%
TGTTAAGATCATCATTCATC+TGG - chr4.1:14656766-14656785 None:intergenic 30.0%
TGTTTAAACTTCCACTATAG+TGG + chr4.1:14653664-14653683 MS.gene09258:intron 30.0%
TTAAGCAAGATTCTTTCAAC+AGG + chr4.1:14653228-14653247 MS.gene09258:CDS 30.0%
TTATCTTGTAGTTGAGATCT+TGG - chr4.1:14655503-14655522 None:intergenic 30.0%
TTATTATGCAAAGCTTGTGA+TGG + chr4.1:14656125-14656144 MS.gene09258:intron 30.0%
TTCAAAGGAGTAAATCTGTA+AGG + chr4.1:14652466-14652485 MS.gene09258:intron 30.0%
TTCAAATGATTGTGATCCTA+TGG + chr4.1:14655400-14655419 MS.gene09258:CDS 30.0%
TTCATAAACCATATTTGCAC+GGG + chr4.1:14653797-14653816 MS.gene09258:CDS 30.0%
TTGAATGATGCTCAAATGAA+AGG - chr4.1:14654509-14654528 None:intergenic 30.0%
TTGACATCTGATAATCATGA+AGG + chr4.1:14652987-14653006 MS.gene09258:CDS 30.0%
TTGATCTGTGACTTTCATTT+CGG - chr4.1:14655717-14655736 None:intergenic 30.0%
TTTCATCATTGCATATGTGT+TGG + chr4.1:14652504-14652523 MS.gene09258:intron 30.0%
TTTGTAATTGAATGAACCTG+GGG - chr4.1:14652634-14652653 None:intergenic 30.0%
! AGAAAAATAGCTCTGTTCAA+AGG + chr4.1:14652451-14652470 MS.gene09258:CDS 30.0%
! CTTTTGTAATTGAATGAACC+TGG - chr4.1:14652636-14652655 None:intergenic 30.0%
! GATACTATTGTACGTGATTT+TGG + chr4.1:14652783-14652802 MS.gene09258:intron 30.0%
! GCATATAAAGACGTTGATAA+TGG - chr4.1:14656605-14656624 None:intergenic 30.0%
! GGTAAATCTTAAAAGTATGC+AGG - chr4.1:14654972-14654991 None:intergenic 30.0%
! GTCAAATTGTATTGGCAATT+CGG - chr4.1:14654283-14654302 None:intergenic 30.0%
! TCTTTTGCGTCAAATTGTAT+TGG - chr4.1:14654291-14654310 None:intergenic 30.0%
! TGCAAGTTTGAATCTGAAAT+TGG - chr4.1:14655362-14655381 None:intergenic 30.0%
!! AGGAACAAATTTTGGGAATA+AGG - chr4.1:14656817-14656836 None:intergenic 30.0%
!! ATTTGTTTTCTGCCAGTTAT+GGG + chr4.1:14653531-14653550 MS.gene09258:intron 30.0%
!! ATTTTGAGAAAAAACCCAAG+AGG + chr4.1:14655770-14655789 MS.gene09258:CDS 30.0%
!! CAAAGTTGACTTGAATACTT+TGG + chr4.1:14654179-14654198 MS.gene09258:CDS 30.0%
!! TAACAACATGTTTCTGAGAT+GGG - chr4.1:14655924-14655943 None:intergenic 30.0%
!! TATTTGTTTTCTGCCAGTTA+TGG + chr4.1:14653530-14653549 MS.gene09258:intron 30.0%
!! TTAAAAGTATGCAGGTCTTT+TGG - chr4.1:14654964-14654983 None:intergenic 30.0%
!! TTGTTATTGCTTCCTTTTGA+AGG - chr4.1:14654855-14654874 None:intergenic 30.0%
!!! GTTTTAAAAACTTAACCCGT+GGG - chr4.1:14655102-14655121 None:intergenic 30.0%
!!! TGTTTTAAAAACTTAACCCG+TGG - chr4.1:14655103-14655122 None:intergenic 30.0%
!!! TTTGAACAGAGCTATTTTTC+TGG - chr4.1:14652452-14652471 None:intergenic 30.0%
AACCAAAGGACTTTCAGATT+CGG + chr4.1:14651870-14651889 MS.gene09258:CDS 35.0%
AAGCATTTATCATCCACAGA+TGG - chr4.1:14653131-14653150 None:intergenic 35.0%
AAGCTGTCAGATGAAGATTT+GGG + chr4.1:14652276-14652295 MS.gene09258:CDS 35.0%
AATCTTCCCAAAGATGACTA+TGG + chr4.1:14653877-14653896 MS.gene09258:CDS 35.0%
ACTTGGAATTTCTCACCATA+GGG - chr4.1:14656450-14656469 None:intergenic 35.0%
AGCTCAGAGTCTAAATCAAT+TGG + chr4.1:14654608-14654627 MS.gene09258:CDS 35.0%
ATACTTCCTTCATAAGGTCT+TGG - chr4.1:14655901-14655920 None:intergenic 35.0%
ATATGTGCGATGGAACTAAT+TGG + chr4.1:14652880-14652899 MS.gene09258:intron 35.0%
ATGATGCTCAAATGAAAGGT+TGG - chr4.1:14654505-14654524 None:intergenic 35.0%
ATTCCCCTATCAAAATTCAG+AGG - chr4.1:14652252-14652271 None:intergenic 35.0%
ATTTCAGTATCACGAGTCAT+TGG - chr4.1:14653335-14653354 None:intergenic 35.0%
CAAAAGATTATGGTTCTCAC+CGG - chr4.1:14654930-14654949 None:intergenic 35.0%
CAAAATGTCTAACCCATAAC+TGG - chr4.1:14653546-14653565 None:intergenic 35.0%
CAATCATTTGAATCACTTCC+AGG - chr4.1:14655392-14655411 None:intergenic 35.0%
CATCATTCAAGCAATGAGAA+AGG + chr4.1:14654519-14654538 MS.gene09258:CDS 35.0%
CATGAAGACAAGAAGGTTAT+GGG + chr4.1:14652942-14652961 MS.gene09258:CDS 35.0%
CCATCATAAAAATGAAGAGG+CGG + chr4.1:14654062-14654081 MS.gene09258:CDS 35.0%
CGATCTGAAAACTTAACACT+TGG - chr4.1:14656892-14656911 None:intergenic 35.0%
CTTAACAAGATCGTCATCTT+CGG - chr4.1:14651947-14651966 None:intergenic 35.0%
GAATAATCTTGACTGTGCTA+AGG + chr4.1:14653250-14653269 MS.gene09258:CDS 35.0%
GATAAGATTGTCACAAATGG+TGG + chr4.1:14654432-14654451 MS.gene09258:CDS 35.0%
GATGCTATGGGAGATAATTT+CGG + chr4.1:14652663-14652682 MS.gene09258:CDS 35.0%
GCATCTTTGAACCATTAACT+AGG - chr4.1:14654833-14654852 None:intergenic 35.0%
GTAGATACTGAGAAAGTGAA+TGG + chr4.1:14653089-14653108 MS.gene09258:CDS 35.0%
GTTACATCGTTTCCACAAAA+AGG - chr4.1:14651853-14651872 None:intergenic 35.0%
TACTTCCTTCATAAGGTCTT+GGG - chr4.1:14655900-14655919 None:intergenic 35.0%
TACTTGGAATTTCTCACCAT+AGG - chr4.1:14656451-14656470 None:intergenic 35.0%
TCATGAAGACAAGAAGGTTA+TGG + chr4.1:14652941-14652960 MS.gene09258:CDS 35.0%
TCATGACAATGACCCAATTT+CGG - chr4.1:14652927-14652946 None:intergenic 35.0%
TCATTGTCATGAAGACAAGA+AGG + chr4.1:14652935-14652954 MS.gene09258:CDS 35.0%
TGAAACAGAACAACTTGCAA+AGG + chr4.1:14656730-14656749 MS.gene09258:CDS 35.0%
TGGTGAGATGAAAAATGGTT+TGG + chr4.1:14654890-14654909 MS.gene09258:CDS 35.0%
TGGTTACCATAGTCATCTTT+GGG - chr4.1:14653886-14653905 None:intergenic 35.0%
TGTGATGATATTGTGCTCAA+TGG + chr4.1:14653356-14653375 MS.gene09258:CDS 35.0%
TTCTCAGTATCTACTTGCAT+TGG - chr4.1:14653083-14653102 None:intergenic 35.0%
TTGCAAAAATGACGATGTTG+TGG + chr4.1:14654680-14654699 MS.gene09258:CDS 35.0%
TTTGCTGGTGAGATGAAAAA+TGG + chr4.1:14654885-14654904 MS.gene09258:CDS 35.0%
! AAAAGGCTAATGGATGCTAT+GGG + chr4.1:14652651-14652670 MS.gene09258:CDS 35.0%
! AAATTGTATTGGCAATTCGG+AGG - chr4.1:14654280-14654299 None:intergenic 35.0%
! AAGATTGATAGTTGCACCAT+GGG + chr4.1:14653026-14653045 MS.gene09258:CDS 35.0%
! AAGATTGCTTCCGATTTTGT+TGG + chr4.1:14655144-14655163 MS.gene09258:CDS 35.0%
! AATTAGCTTGATATGTGCGA+TGG + chr4.1:14652870-14652889 MS.gene09258:intron 35.0%
! AGCAAATTTTGTTCTTTGGG+TGG - chr4.1:14654462-14654481 None:intergenic 35.0%
! ATTATTTCTCTCATGGGCTT+TGG - chr4.1:14653468-14653487 None:intergenic 35.0%
! CTAACAACATGTTTCTGAGA+TGG - chr4.1:14655925-14655944 None:intergenic 35.0%
! TAAGATTGATAGTTGCACCA+TGG + chr4.1:14653025-14653044 MS.gene09258:CDS 35.0%
! TAAGTTTTCAGATCGTGTTG+AGG + chr4.1:14656897-14656916 MS.gene09258:CDS 35.0%
! TCACGTTTTGCTTTCTTGAA+AGG - chr4.1:14651973-14651992 None:intergenic 35.0%
! TCTTGGAAAGATGGCAATTT+TGG - chr4.1:14654255-14654274 None:intergenic 35.0%
! TTATTTCTCTCATGGGCTTT+GGG - chr4.1:14653467-14653486 None:intergenic 35.0%
! TTGGTAGTTGTTCTATGTAG+AGG + chr4.1:14652802-14652821 MS.gene09258:intron 35.0%
! TTTGGAATCCAATACTACAC+CGG + chr4.1:14654908-14654927 MS.gene09258:CDS 35.0%
!! ATCCAAAAGCTTCTGAAGTT+TGG - chr4.1:14655324-14655343 None:intergenic 35.0%
!! ATGGTTGATTCTTTTTGCTG+CGG - chr4.1:14651771-14651790 None:intergenic 35.0%
!! CGCCTCTTCATTTTTATGAT+GGG - chr4.1:14654064-14654083 None:intergenic 35.0%
!! GAGTGGATTATTTCTCTCAT+GGG - chr4.1:14653474-14653493 None:intergenic 35.0%
!! TCCAAAAGCTTCTGAAGTTT+GGG - chr4.1:14655323-14655342 None:intergenic 35.0%
!! TGAGTGGATTATTTCTCTCA+TGG - chr4.1:14653475-14653494 None:intergenic 35.0%
!!! AAAGTGCTTGCTGATTTTAC+AGG + chr4.1:14654021-14654040 MS.gene09258:intron 35.0%
!!! AACAAAAAGGCTAGTTTTGC+TGG + chr4.1:14654870-14654889 MS.gene09258:CDS 35.0%
!!! CGTCATTTTTGCAAATTGCA+TGG - chr4.1:14654674-14654693 None:intergenic 35.0%
AAAGGAGTTCTCGAGATAGT+AGG - chr4.1:14655546-14655565 None:intergenic 40.0%
AAGAAAGCAGTTTGTGAGTC+TGG + chr4.1:14654551-14654570 MS.gene09258:CDS 40.0%
AAGGAGTTCTCGAGATAGTA+GGG - chr4.1:14655545-14655564 None:intergenic 40.0%
AATCTTGCTTAACATCACCG+TGG - chr4.1:14653220-14653239 None:intergenic 40.0%
AATTTGGTTAAACCCTCAGC+TGG + chr4.1:14653619-14653638 MS.gene09258:intron 40.0%
ACACAGATGACATCATTAGG+TGG - chr4.1:14652324-14652343 None:intergenic 40.0%
ACCTCAGAATGTCAAACCTA+TGG + chr4.1:14653397-14653416 MS.gene09258:CDS 40.0%
AGTGCTTTCTTGAGTGTTTC+TGG - chr4.1:14653429-14653448 None:intergenic 40.0%
AGTTGTCACTAGAGAAGAAG+TGG + chr4.1:14655628-14655647 MS.gene09258:CDS 40.0%
ATAAGTGGTTGAAAACGTGG+TGG - chr4.1:14653906-14653925 None:intergenic 40.0%
ATAGGGCCAGAATTTACTTG+AGG - chr4.1:14656419-14656438 None:intergenic 40.0%
ATCGGGAAGTAGCTGAATTA+GGG + chr4.1:14652076-14652095 MS.gene09258:CDS 40.0%
ATGCTTGAGTGAATCAAAGG+TGG + chr4.1:14653145-14653164 MS.gene09258:CDS 40.0%
ATTTGGTTAAACCCTCAGCT+GGG + chr4.1:14653620-14653639 MS.gene09258:intron 40.0%
CAAATCTTCATCTGACAGCT+TGG - chr4.1:14652277-14652296 None:intergenic 40.0%
CAAATGCTCTTTCTGCATGA+AGG - chr4.1:14655838-14655857 None:intergenic 40.0%
CAAGCTGTCAGATGAAGATT+TGG + chr4.1:14652275-14652294 MS.gene09258:CDS 40.0%
CCATGAGATGACATATTAGC+AGG - chr4.1:14654225-14654244 None:intergenic 40.0%
CCTAAAAAAAACCCAGCTGA+GGG - chr4.1:14653634-14653653 None:intergenic 40.0%
CCTAATGATGTCATCTGTGT+AGG + chr4.1:14652324-14652343 MS.gene09258:CDS 40.0%
CCTACACAGATGACATCATT+AGG - chr4.1:14652327-14652346 None:intergenic 40.0%
CCTGCTAATATGTCATCTCA+TGG + chr4.1:14654222-14654241 MS.gene09258:CDS 40.0%
CGAAGATGACGATCTTGTTA+AGG + chr4.1:14651945-14651964 MS.gene09258:CDS 40.0%
CTTACATGTTTGCTCTTGAG+TGG - chr4.1:14653491-14653510 None:intergenic 40.0%
CTTCTGAATGGCCTAGTTAA+TGG + chr4.1:14654819-14654838 MS.gene09258:CDS 40.0%
CTTGGAATTTCTCACCATAG+GGG - chr4.1:14656449-14656468 None:intergenic 40.0%
GAATCAACCATACTCAGTTC+CGG + chr4.1:14651780-14651799 MS.gene09258:CDS 40.0%
GACAACGAAGCTATCTCATA+AGG - chr4.1:14656501-14656520 None:intergenic 40.0%
GATGGGATACTTCCTTCATA+AGG - chr4.1:14655907-14655926 None:intergenic 40.0%
GATTTACCAGTCACACCTTT+AGG + chr4.1:14655590-14655609 MS.gene09258:CDS 40.0%
GGAATAAGGTATGCACATAC+AGG - chr4.1:14656803-14656822 None:intergenic 40.0%
GGCCCATCATAAAAATGAAG+AGG + chr4.1:14654059-14654078 MS.gene09258:CDS 40.0%
GGTGATAGTACAGGAAATTC+TGG + chr4.1:14655422-14655441 MS.gene09258:CDS 40.0%
GGTTCAAAGATGCCTTCAAA+AGG + chr4.1:14654840-14654859 MS.gene09258:CDS 40.0%
GTAGCTGAAAATTCAAGCGA+GGG + chr4.1:14652426-14652445 MS.gene09258:CDS 40.0%
GTGACAACTTGATCAGCTAT+AGG - chr4.1:14655617-14655636 None:intergenic 40.0%
GTGGTTACCATAGTCATCTT+TGG - chr4.1:14653887-14653906 None:intergenic 40.0%
GTTGATTGGATTCTTGATGC+AGG + chr4.1:14652572-14652591 MS.gene09258:intron 40.0%
GTTGTCACTAGAGAAGAAGT+GGG + chr4.1:14655629-14655648 MS.gene09258:CDS 40.0%
TAAACTTCCACTATAGTGGC+TGG + chr4.1:14653668-14653687 MS.gene09258:intron 40.0%
TATTTCTCTCATGGGCTTTG+GGG - chr4.1:14653466-14653485 None:intergenic 40.0%
TCAAACTTGCAAGTAACTCC+TGG + chr4.1:14655371-14655390 MS.gene09258:CDS 40.0%
TCCACAAAAAGGAACAGGAA+CGG - chr4.1:14651842-14651861 None:intergenic 40.0%
TCCATAGGTTTGACATTCTG+AGG - chr4.1:14653401-14653420 None:intergenic 40.0%
TCCTATAGTTGACTGAACCA+GGG - chr4.1:14653837-14653856 None:intergenic 40.0%
TCGCCATCAATTGCTGAAAA+CGG + chr4.1:14652174-14652193 MS.gene09258:CDS 40.0%
TCGTTTCCACAAAAAGGAAC+AGG - chr4.1:14651847-14651866 None:intergenic 40.0%
TCTTGAAACGGAACTTGAAC+CGG - chr4.1:14651802-14651821 None:intergenic 40.0%
TGATCAGCTATAGGACCTAA+AGG - chr4.1:14655608-14655627 None:intergenic 40.0%
TGATTTAGACTCTGAGCTTC+AGG - chr4.1:14654606-14654625 None:intergenic 40.0%
TGCATAAGTGGTTGAAAACG+TGG - chr4.1:14653909-14653928 None:intergenic 40.0%
TGTAGCTGAAAATTCAAGCG+AGG + chr4.1:14652425-14652444 MS.gene09258:CDS 40.0%
TGTGGAAACGATGTAACCAA+AGG + chr4.1:14651856-14651875 MS.gene09258:CDS 40.0%
TTCAGATCGTGTTGAGGAAA+AGG + chr4.1:14656903-14656922 MS.gene09258:CDS 40.0%
TTCCGAATCTGAAAGTCCTT+TGG - chr4.1:14651875-14651894 None:intergenic 40.0%
TTGAAATTGTTCAAAGCCCC+AGG + chr4.1:14652615-14652634 MS.gene09258:CDS 40.0%
TTGGAATTTCTCACCATAGG+GGG - chr4.1:14656448-14656467 None:intergenic 40.0%
TTTCCTGTACTATCACCCAT+AGG - chr4.1:14655419-14655438 None:intergenic 40.0%
! AGAGGCGGATTTATATGCAA+AGG + chr4.1:14654077-14654096 MS.gene09258:CDS 40.0%
! CAAAAGGCTAATGGATGCTA+TGG + chr4.1:14652650-14652669 MS.gene09258:CDS 40.0%
! GAAGCTTCTTCACTTTGAGA+TGG - chr4.1:14654120-14654139 None:intergenic 40.0%
! GAATCTGAAATTGGCAGAAG+TGG - chr4.1:14655353-14655372 None:intergenic 40.0%
! TTTGAGATGGCAAAGGAAGT+TGG - chr4.1:14654107-14654126 None:intergenic 40.0%
! TTTTCAGCTACATTAGCAGC+AGG - chr4.1:14652417-14652436 None:intergenic 40.0%
!! ACGAGCCTCTGAATTTTGAT+AGG + chr4.1:14652244-14652263 MS.gene09258:CDS 40.0%
!! ATTAGGGTTTTATGCTCCGT+CGG + chr4.1:14652092-14652111 MS.gene09258:CDS 40.0%
!! CCAAAAGCTTCTGAAGTTTG+GGG - chr4.1:14655322-14655341 None:intergenic 40.0%
!! CCGCCTCTTCATTTTTATGA+TGG - chr4.1:14654065-14654084 None:intergenic 40.0%
!! CGAGCCTCTGAATTTTGATA+GGG + chr4.1:14652245-14652264 MS.gene09258:CDS 40.0%
!! GAGCCTCTGAATTTTGATAG+GGG + chr4.1:14652246-14652265 MS.gene09258:CDS 40.0%
!! GCTGATTTTACAGGTACATC+TGG + chr4.1:14654030-14654049 MS.gene09258:intron 40.0%
!! GGGGCTTTGAACAATTTCAA+AGG - chr4.1:14652615-14652634 None:intergenic 40.0%
!! TCTTCACTTTGAGATGGCAA+AGG - chr4.1:14654114-14654133 None:intergenic 40.0%
!! TGGTTGATTCTTTTTGCTGC+GGG - chr4.1:14651770-14651789 None:intergenic 40.0%
!!! CCTCAGCTGGGTTTTTTTTA+GGG + chr4.1:14653632-14653651 MS.gene09258:intron 40.0%
AAAAACCCAAGAGGATGCAG+AGG + chr4.1:14655779-14655798 MS.gene09258:CDS 45.0%
AAAACCCAAGAGGATGCAGA+GGG + chr4.1:14655780-14655799 MS.gene09258:CDS 45.0%
AAAAGGAACAGGAACGGGAA+CGG - chr4.1:14651836-14651855 None:intergenic 45.0%
AAGAAGGTTATGGGAGGTCA+GGG + chr4.1:14652951-14652970 MS.gene09258:CDS 45.0%
AAGTTCACCAGCCACTATAG+TGG - chr4.1:14653678-14653697 None:intergenic 45.0%
ACAGATCAACTTGATGCCCT+TGG + chr4.1:14655728-14655747 MS.gene09258:CDS 45.0%
ACATGTGCAACGGAGCTAAT+TGG + chr4.1:14652754-14652773 MS.gene09258:intron 45.0%
ACCTGACTTCCATCCAAAAG+AGG - chr4.1:14655977-14655996 None:intergenic 45.0%
ACTTGAACCGGAACTGAGTA+TGG - chr4.1:14651790-14651809 None:intergenic 45.0%
AGCAGACAAATGACTGTCAG+TGG + chr4.1:14654144-14654163 MS.gene09258:CDS 45.0%
ATCAGCTTCCCGTGCAAATA+TGG - chr4.1:14653808-14653827 None:intergenic 45.0%
ATTGGTGAAGATGCCAGTTC+TGG - chr4.1:14653065-14653084 None:intergenic 45.0%
CAAAACACCAAGCTGCTCTA+AGG - chr4.1:14653297-14653316 None:intergenic 45.0%
CAACGGAGCTAATTGGCTAT+TGG + chr4.1:14652761-14652780 MS.gene09258:intron 45.0%
CCACAAAAAGGAACAGGAAC+GGG - chr4.1:14651841-14651860 None:intergenic 45.0%
CCCTAAAAAAAACCCAGCTG+AGG - chr4.1:14653635-14653654 None:intergenic 45.0%
CCTATAGTTGACTGAACCAG+GGG - chr4.1:14653836-14653855 None:intergenic 45.0%
CGAATTTATTCCCCACTTGC+CGG + chr4.1:14652039-14652058 MS.gene09258:CDS 45.0%
CTCCTATAGTTGACTGAACC+AGG - chr4.1:14653838-14653857 None:intergenic 45.0%
CTGAAACACCTGGATGTTGT+CGG + chr4.1:14655684-14655703 MS.gene09258:CDS 45.0%
CTGGTTCAGTCAACTATAGG+AGG + chr4.1:14653836-14653855 MS.gene09258:CDS 45.0%
GAAGACAAGAAGGTTATGGG+AGG + chr4.1:14652945-14652964 MS.gene09258:CDS 45.0%
GAAGAGGGTTCCTCTTGAAA+CGG - chr4.1:14651814-14651833 None:intergenic 45.0%
GACTGATCCTTGTTCCGTAA+TGG + chr4.1:14654404-14654423 MS.gene09258:CDS 45.0%
GAGAAATCACCTGAAACACC+TGG + chr4.1:14655674-14655693 MS.gene09258:CDS 45.0%
GAGTGAATCAAAGGTGGATC+TGG + chr4.1:14653151-14653170 MS.gene09258:CDS 45.0%
GATCCTATGGGTGATAGTAC+AGG + chr4.1:14655413-14655432 MS.gene09258:CDS 45.0%
GATCGGGAAGTAGCTGAATT+AGG + chr4.1:14652075-14652094 MS.gene09258:CDS 45.0%
GTGTTTATCTGTGCCATCTG+TGG + chr4.1:14653115-14653134 MS.gene09258:CDS 45.0%
TACAGGTACATCTGGTGATC+AGG + chr4.1:14654038-14654057 MS.gene09258:intron 45.0%
TCACACACCATTACGGAACA+AGG - chr4.1:14654414-14654433 None:intergenic 45.0%
TGATCCGAAATTCCCGCAAA+CGG + chr4.1:14651653-14651672 MS.gene09258:CDS 45.0%
TGATTTCTCCCTGTTGGACA+AGG - chr4.1:14655663-14655682 None:intergenic 45.0%
TGGAATTTCTCACCATAGGG+GGG - chr4.1:14656447-14656466 None:intergenic 45.0%
TGTTTCAGATGCTTTCCTGC+AGG - chr4.1:14656717-14656736 None:intergenic 45.0%
TTACCAGACACTGCAACACA+TGG + chr4.1:14654777-14654796 MS.gene09258:CDS 45.0%
TTCAGGTGATTTCTCCCTGT+TGG - chr4.1:14655669-14655688 None:intergenic 45.0%
TTTAGACTCTGAGCTTCAGG+AGG - chr4.1:14654603-14654622 None:intergenic 45.0%
TTTCTGGGTGCTAGAGATGT+TGG + chr4.1:14653182-14653201 MS.gene09258:CDS 45.0%
! AACGACACTCCTCTTTTGGA+TGG + chr4.1:14655965-14655984 MS.gene09258:CDS 45.0%
! ATAGGACCTAAAGGTGTGAC+TGG - chr4.1:14655599-14655618 None:intergenic 45.0%
! CCCCAAACTTCAGAAGCTTT+TGG + chr4.1:14655319-14655338 MS.gene09258:CDS 45.0%
! GATCTGGCTGCAGATTTTCT+GGG + chr4.1:14653167-14653186 MS.gene09258:CDS 45.0%
! GGTTCAAGTTCCGTTTCAAG+AGG + chr4.1:14651801-14651820 MS.gene09258:CDS 45.0%
! TCAGAGTTAGCCTCAACAGA+GGG - chr4.1:14654339-14654358 None:intergenic 45.0%
! TCCTCTTTTGGATGGAAGTC+AGG + chr4.1:14655973-14655992 MS.gene09258:CDS 45.0%
! TCTGAGGTATGCTCTGCATT+TGG - chr4.1:14653385-14653404 None:intergenic 45.0%
! TGTCAACGACACTCCTCTTT+TGG + chr4.1:14655961-14655980 MS.gene09258:CDS 45.0%
! TTCTGGAAAATGGCAGTGTG+AGG + chr4.1:14652115-14652134 MS.gene09258:CDS 45.0%
!! GGAAAGATGGCAATTTTGGC+TGG - chr4.1:14654251-14654270 None:intergenic 45.0%
!! GTGTTTCTGGTCAGATCCAT+AGG - chr4.1:14653416-14653435 None:intergenic 45.0%
!! GTTGGTAATGCTTTCGACCA+CGG + chr4.1:14653200-14653219 MS.gene09258:CDS 45.0%
!! TCGCCGTTTTCAGCAATTGA+TGG - chr4.1:14652180-14652199 None:intergenic 45.0%
!! TTTTCGGGAACTAACGCCAA+GGG - chr4.1:14655747-14655766 None:intergenic 45.0%
!!! CCCTCAGCTGGGTTTTTTTT+AGG + chr4.1:14653631-14653650 MS.gene09258:intron 45.0%
!! TATATATATATTAGATATTA+TGG + chr4.1:14653992-14654011 MS.gene09258:intron 5.0%
AAAGCCCTCTGCATCCTCTT+GGG - chr4.1:14655787-14655806 None:intergenic 50.0%
AAGGTCTTGGGCAACCTCTT+CGG - chr4.1:14655888-14655907 None:intergenic 50.0%
AATAAATTCGCCTCGCACGG+AGG - chr4.1:14652029-14652048 None:intergenic 50.0%
ACCATAGGGGGGACACTATA+GGG - chr4.1:14656436-14656455 None:intergenic 50.0%
ATACACCTGTGGATGATGCG+AGG + chr4.1:14652199-14652218 MS.gene09258:CDS 50.0%
CAAGAAGGTTATGGGAGGTC+AGG + chr4.1:14652950-14652969 MS.gene09258:CDS 50.0%
CCCCTGGTTCAGTCAACTAT+AGG + chr4.1:14653833-14653852 MS.gene09258:CDS 50.0%
CGACAACATCCAGGTGTTTC+AGG - chr4.1:14655686-14655705 None:intergenic 50.0%
CGATGTGAGGAATGTGGAAG+AGG + chr4.1:14652362-14652381 MS.gene09258:CDS 50.0%
CGTTCCGTTTGCGGGAATTT+CGG - chr4.1:14651660-14651679 None:intergenic 50.0%
CTTATCTGCACCCTCTGTTG+AGG + chr4.1:14654326-14654345 MS.gene09258:CDS 50.0%
CTTGGCGTTAGTTCCCGAAA+AGG + chr4.1:14655746-14655765 MS.gene09258:CDS 50.0%
GCACCATGGGTGATACCAAT+GGG + chr4.1:14653039-14653058 MS.gene09258:CDS 50.0%
GCTAAGGCTGCTGATCACAA+TGG + chr4.1:14653266-14653285 MS.gene09258:CDS 50.0%
GGAAAATGGCAGTGTGAGGA+CGG + chr4.1:14652119-14652138 MS.gene09258:CDS 50.0%
GGGAATAAATTCGCCTCGCA+CGG - chr4.1:14652032-14652051 None:intergenic 50.0%
GGTTCTCACCGGTGTAGTAT+TGG - chr4.1:14654919-14654938 None:intergenic 50.0%
GGTTGCCCAAGACCTTATGA+AGG + chr4.1:14655892-14655911 MS.gene09258:CDS 50.0%
GTAACCTGGGATGTCTTTGC+AGG + chr4.1:14653774-14653793 MS.gene09258:intron 50.0%
TACACCTGCCTTGTCCAACA+GGG + chr4.1:14655652-14655671 MS.gene09258:CDS 50.0%
TACTTCCCGATCAGAATCGC+CGG - chr4.1:14652067-14652086 None:intergenic 50.0%
TAGAAGCTAGCTGCGATGTG+AGG + chr4.1:14652349-14652368 MS.gene09258:CDS 50.0%
TAGCTGCGATGTGAGGAATG+TGG + chr4.1:14652356-14652375 MS.gene09258:CDS 50.0%
TCGGAGGAGTCTTGGAAAGA+TGG - chr4.1:14654264-14654283 None:intergenic 50.0%
TCTACCTTGTGCTACCACCA+AGG + chr4.1:14652002-14652021 MS.gene09258:CDS 50.0%
TGAAAACGGCGATACACCTG+TGG + chr4.1:14652188-14652207 MS.gene09258:CDS 50.0%
TGAACCTGCAAAGACATCCC+AGG - chr4.1:14653781-14653800 None:intergenic 50.0%
TGATACCAATGGGCCAGAAC+TGG + chr4.1:14653049-14653068 MS.gene09258:CDS 50.0%
TGCACCATGGGTGATACCAA+TGG + chr4.1:14653038-14653057 MS.gene09258:CDS 50.0%
TTCAGGTGAAAGAAGCCTGC+AGG + chr4.1:14656699-14656718 MS.gene09258:intron 50.0%
TTGATCCTCGCATCATCCAC+AGG - chr4.1:14652207-14652226 None:intergenic 50.0%
TTGGCAATTCGGAGGAGTCT+TGG - chr4.1:14654272-14654291 None:intergenic 50.0%
TTTGCTGCGGGAACTTGAAC+CGG - chr4.1:14651758-14651777 None:intergenic 50.0%
! CCCGTTCCTGTTCCTTTTTG+TGG + chr4.1:14651838-14651857 MS.gene09258:CDS 50.0%
! CTCAGAGTTAGCCTCAACAG+AGG - chr4.1:14654340-14654359 None:intergenic 50.0%
! GGATCTGGCTGCAGATTTTC+TGG + chr4.1:14653166-14653185 MS.gene09258:CDS 50.0%
!! AGGTTCTAAATCGCTGCCCA+CGG + chr4.1:14655083-14655102 MS.gene09258:intron 50.0%
!! CTTTTCGGGAACTAACGCCA+AGG - chr4.1:14655748-14655767 None:intergenic 50.0%
!!! CTGCCATTTTCCAGAACCGA+CGG - chr4.1:14652111-14652130 None:intergenic 50.0%
!!! GTTTTATGCTCCGTCGGTTC+TGG + chr4.1:14652098-14652117 MS.gene09258:CDS 50.0%
AACAGGAACGGGAACGGAAG+AGG - chr4.1:14651830-14651849 None:intergenic 55.0%
ACAGGAACGGGAACGGAAGA+GGG - chr4.1:14651829-14651848 None:intergenic 55.0%
AGATCGGACGTTCCGTTTGC+GGG - chr4.1:14651668-14651687 None:intergenic 55.0%
AGCTTTGCTGCGGGTGAATG+TGG - chr4.1:14651707-14651726 None:intergenic 55.0%
CAAAGCCCTCTGCATCCTCT+TGG - chr4.1:14655788-14655807 None:intergenic 55.0%
CACCATAGGGGGGACACTAT+AGG - chr4.1:14656437-14656456 None:intergenic 55.0%
CCACCATGTGTTGCAGTGTC+TGG - chr4.1:14654783-14654802 None:intergenic 55.0%
CCAGACACTGCAACACATGG+TGG + chr4.1:14654780-14654799 MS.gene09258:CDS 55.0%
GACAAGCTCCGACAACATCC+AGG - chr4.1:14655695-14655714 None:intergenic 55.0%
GACACTGCAACACATGGTGG+TGG + chr4.1:14654783-14654802 MS.gene09258:CDS 55.0%
GAGATCGGACGTTCCGTTTG+CGG - chr4.1:14651669-14651688 None:intergenic 55.0%
GGGAAGCTGATCAAAACCCC+TGG + chr4.1:14653817-14653836 MS.gene09258:CDS 55.0%
GTACACCTGCCTTGTCCAAC+AGG + chr4.1:14655651-14655670 MS.gene09258:CDS 55.0%
TCAGCTGCTAGATGCCGAAG+AGG + chr4.1:14655871-14655890 MS.gene09258:CDS 55.0%
TGGCCCATTGGTATCACCCA+TGG - chr4.1:14653045-14653064 None:intergenic 55.0%
TTCTCCCTGTTGGACAAGGC+AGG - chr4.1:14655659-14655678 None:intergenic 55.0%
! AGATGCCAGTTCTGGCCCAT+TGG - chr4.1:14653057-14653076 None:intergenic 55.0%
! AGGTCCTTGGTGGTAGCACA+AGG - chr4.1:14652009-14652028 None:intergenic 55.0%
! GTTGCAGTGTCTGGTAACGC+AGG - chr4.1:14654774-14654793 None:intergenic 55.0%
!! GCTCCGTCGGTTCTGGAAAA+TGG + chr4.1:14652105-14652124 MS.gene09258:CDS 55.0%
!! GGTTCTAAATCGCTGCCCAC+GGG + chr4.1:14655084-14655103 MS.gene09258:intron 55.0%
AAAGCTCACCGTACCCGCTC+CGG + chr4.1:14651721-14651740 MS.gene09258:CDS 60.0%
AATGTGGATGAGGCGGGTGG+CGG - chr4.1:14651691-14651710 None:intergenic 60.0%
CGGGTGAATGTGGATGAGGC+GGG - chr4.1:14651697-14651716 None:intergenic 60.0%
GCCCTATAGTGTCCCCCCTA+TGG + chr4.1:14656432-14656451 MS.gene09258:intron 60.0%
GCGGGTGAATGTGGATGAGG+CGG - chr4.1:14651698-14651717 None:intergenic 60.0%
GCTGCGGGTGAATGTGGATG+AGG - chr4.1:14651701-14651720 None:intergenic 60.0%
GGCTGTGCCTTAGAGCAGCT+TGG + chr4.1:14653287-14653306 MS.gene09258:CDS 60.0%
GGGTACGGTGAGCTTTGCTG+CGG - chr4.1:14651717-14651736 None:intergenic 60.0%
GGTACGGTGAGCTTTGCTGC+GGG - chr4.1:14651716-14651735 None:intergenic 60.0%
GTGAATGTGGATGAGGCGGG+TGG - chr4.1:14651694-14651713 None:intergenic 60.0%
TGAACCGGACCGGATCTGAC+CGG - chr4.1:14651743-14651762 None:intergenic 60.0%
TGCGGGAACTTGAACCGGAC+CGG - chr4.1:14651753-14651772 None:intergenic 60.0%
GGATCTGACCGGAGCGGGTA+CGG - chr4.1:14651732-14651751 None:intergenic 65.0%
GTACCCGCTCCGGTCAGATC+CGG + chr4.1:14651731-14651750 MS.gene09258:CDS 65.0%
TATTCCCCACTTGCCGGCGC+CGG + chr4.1:14652045-14652064 MS.gene09258:CDS 65.0%
!! ATGAGGCGGGTGGCGGAGAT+CGG - chr4.1:14651684-14651703 None:intergenic 65.0%
CCACCAAGGACCTCCGTGCG+AGG + chr4.1:14652016-14652035 MS.gene09258:CDS 70.0%
CCGATCAGAATCGCCGGCGC+CGG - chr4.1:14652061-14652080 None:intergenic 70.0%
CCTCGCACGGAGGTCCTTGG+TGG - chr4.1:14652019-14652038 None:intergenic 70.0%
CGCTCCGGTCAGATCCGGTC+CGG + chr4.1:14651736-14651755 MS.gene09258:CDS 70.0%
CGGACCGGATCTGACCGGAG+CGG - chr4.1:14651738-14651757 None:intergenic 70.0%
GGACCGGATCTGACCGGAGC+GGG - chr4.1:14651737-14651756 None:intergenic 70.0%
TCGCCTCGCACGGAGGTCCT+TGG - chr4.1:14652022-14652041 None:intergenic 70.0%
!! AATCGCCGGCGCCGGCAAGT+GGG - chr4.1:14652053-14652072 None:intergenic 70.0%
!! CCGGCGCCGGCGATTCTGAT+CGG + chr4.1:14652058-14652077 MS.gene09258:CDS 70.0%
!! CGGCGCCGGCGATTCTGATC+GGG + chr4.1:14652059-14652078 MS.gene09258:CDS 70.0%
!! ATCGCCGGCGCCGGCAAGTG+GGG - chr4.1:14652052-14652071 None:intergenic 75.0%
!! GAATCGCCGGCGCCGGCAAG+TGG - chr4.1:14652054-14652073 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 14651646 14656957 14651646 ID=MS.gene09258
chr4.1 mRNA 14651646 14656957 14651646 ID=MS.gene09258.t1;Parent=MS.gene09258
chr4.1 exon 14651646 14652482 14651646 ID=MS.gene09258.t1.exon1;Parent=MS.gene09258.t1
chr4.1 CDS 14651646 14652482 14651646 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14652594 14652684 14652594 ID=MS.gene09258.t1.exon2;Parent=MS.gene09258.t1
chr4.1 CDS 14652594 14652684 14652594 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14652919 14653505 14652919 ID=MS.gene09258.t1.exon3;Parent=MS.gene09258.t1
chr4.1 CDS 14652919 14653505 14652919 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14653796 14653898 14653796 ID=MS.gene09258.t1.exon4;Parent=MS.gene09258.t1
chr4.1 CDS 14653796 14653898 14653796 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14654043 14654929 14654043 ID=MS.gene09258.t1.exon5;Parent=MS.gene09258.t1
chr4.1 CDS 14654043 14654929 14654043 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14655085 14655187 14655085 ID=MS.gene09258.t1.exon6;Parent=MS.gene09258.t1
chr4.1 CDS 14655085 14655187 14655085 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14655297 14655994 14655297 ID=MS.gene09258.t1.exon7;Parent=MS.gene09258.t1
chr4.1 CDS 14655297 14655994 14655297 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14656704 14656802 14656704 ID=MS.gene09258.t1.exon8;Parent=MS.gene09258.t1
chr4.1 CDS 14656704 14656802 14656704 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
chr4.1 exon 14656877 14656957 14656877 ID=MS.gene09258.t1.exon9;Parent=MS.gene09258.t1
chr4.1 CDS 14656877 14656957 14656877 ID=cds.MS.gene09258.t1;Parent=MS.gene09258.t1
Gene Sequence

>MS.gene09258

ATGGACGTGATCCGAAATTCCCGCAAACGGAACGTCCGATCTCCGCCACCCGCCTCATCCACATTCACCCGCAGCAAAGCTCACCGTACCCGCTCCGGTCAGATCCGGTCCGGTTCAAGTTCCCGCAGCAAAAAGAATCAACCATACTCAGTTCCGGTTCAAGTTCCGTTTCAAGAGGAACCCTCTTCCGTTCCCGTTCCTGTTCCTTTTTGTGGAAACGATGTAACCAAAGGACTTTCAGATTCGGAATTCAAGAATCTAATTCATGATATTTGCAATGAATATTGTGAATCAGATTCCGAAGATGACGATCTTGTTAAGGATCCTTTCAAGAAAGCAAAACGTGATGATGCTAATCTACCTTGTGCTACCACCAAGGACCTCCGTGCGAGGCGAATTTATTCCCCACTTGCCGGCGCCGGCGATTCTGATCGGGAAGTAGCTGAATTAGGGTTTTATGCTCCGTCGGTTCTGGAAAATGGCAGTGTGAGGACGGAATCAGCTGAAATTTCTGAATTAGGGTTTGGATCGCCATCAATTGCTGAAAACGGCGATACACCTGTGGATGATGCGAGGATCAAATCTAATAAGATTCTCGACGAGCCTCTGAATTTTGATAGGGGAATCACCAAGCTGTCAGATGAAGATTTGGGCGAAGAATCATTACAAACGACACCACCTAATGATGTCATCTGTGTAGGTTTAGAAGCTAGCTGCGATGTGAGGAATGTGGAAGAGGCAGACACACTTGTTGTCAAAGATATGTCTCCTGCTGCTAATGTAGCTGAAAATTCAAGCGAGGGCCAGAAAAATAGCTCTGTTCAAAGGAGTAAATCTGTAAGGCCTTTCAATTTTTATTTTCATCATTGCATATGTGTTGGTTAATAATTTTTGTACAAATTACTTTTTTATATGAAATTTTGTTAGTTGATTGGATTCTTGATGCAGGTACTCAAACCGCGTTTACCTTTGAAATTGTTCAAAGCCCCAGGTTCATTCAATTACAAAAGGCTAATGGATGCTATGGGAGATAATTTCGGTAATTGTGTTATGCAGAAAGTCCTTTATTATTTAGTTGTTTGCATAGTGTAGATCATGATTTAGTTTTACATGTGCAACGGAGCTAATTGGCTATTGGATACTATTGTACGTGATTTTGGTAGTTGTTCTATGTAGAGGATCCTTTGTTATTTATTGATTGAATAGTGTAGAATGTAGATGATGAATTAGCTTGATATGTGCGATGGAACTAATTGGCATCGTAATTTTATAGGAATACCGAAATTGGGTCATTGTCATGAAGACAAGAAGGTTATGGGAGGTCAGGGATTGAAACTTCCTTTGACATCTGATAATCATGAAGGTTCTAAGCCTGAAACTAAGATTGATAGTTGCACCATGGGTGATACCAATGGGCCAGAACTGGCATCTTCACCAATGCAAGTAGATACTGAGAAAGTGAATGGCGAGTGTTTATCTGTGCCATCTGTGGATGATAAATGCTTGAGTGAATCAAAGGTGGATCTGGCTGCAGATTTTCTGGGTGCTAGAGATGTTGGTAATGCTTTCGACCACGGTGATGTTAAGCAAGATTCTTTCAACAGGAATAATCTTGACTGTGCTAAGGCTGCTGATCACAATGGCTGTGCCTTAGAGCAGCTTGGTGTTTTGAATGAAGATTGTATACCAATGACTCGTGATACTGAAATATGTGATGATATTGTGCTCAATGGAGACCAAATGCAGAGCATACCTCAGAATGTCAAACCTATGGATCTGACCAGAAACACTCAAGAAAGCACTGTTGAAGCGTTATACCCCAAAGCCCATGAGAGAAATAATCCACTCAAGAGCAAACATGTAAGAATCTGTCATGTTTTTAAATATTTGTTTTCTGCCAGTTATGGGTTAGACATTTTGTTGCTGATCTTTACTAAATTATAGATATACTACCTAATACCTAATACAATGTCAATTTGGTTAAACCCTCAGCTGGGTTTTTTTTAGGGTTGTTGATATGTTTAAACTTCCACTATAGTGGCTGGTGAACTTGCTAACTTCTTCTGTGTTTAATTTTGACAATATATGCATATACATGGTTTTGTATTTGTTGGCAATTATATATCATGTAACCTGGGATGTCTTTGCAGGTTCATAAACCATATTTGCACGGGAAGCTGATCAAAACCCCTGGTTCAGTCAACTATAGGAGGTTGCTTCCATATTTTAAGAATCTTCCCAAAGATGACTATGGTAACCACCACGTTTTCAACCACTTATGCAATACAATATTAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGATATTATGGACACTGAAAGTGCTTGCTGATTTTACAGGTACATCTGGTGATCAGGCCCATCATAAAAATGAAGAGGCGGATTTATATGCAAAGGAGTTCCAACTTCCTTTGCCATCTCAAAGTGAAGAAGCTTCTATTAGCAGACAAATGACTGTCAGTGGCTCTATCCATGACAAAGTTGACTTGAATACTTTGGAAAACAACATCTCAGTCAATCCTGCTAATATGTCATCTCATGGCTACCAGCCAAAATTGCCATCTTTCCAAGACTCCTCCGAATTGCCAATACAATTTGACGCAAAAGAAATGGCACATGAGTGCTTATCTGCACCCTCTGTTGAGGCTAACTCTGAGAAAACTGTCATCAGTTCTAAAGATGAATGCTTGAGTGAATCAGCGACTGATCCTTGTTCCGTAATGGTGTGTGATAAGATTGTCACAAATGGTGGGTCACCACCCAAAGAACAAAATTTGCTTAATGTCAATAATGATATCTCCAACCTTTCATTTGAGCATCATTCAAGCAATGAGAAAGGATTCACTGAAAGAAAGCAGTTTGTGAGTCTGGAGAAGCATGAATCTGTTAGCAGATGTCCTCCTGAAGCTCAGAGTCTAAATCAATTGGATCCTAATATGTTAGATGCTGAAGAGAATGAAACAAGCAGCCATGCAATTTGCAAAAATGACGATGTTGTGGTTTTATGTCACGTCACCATCTCAAATGAAGAATCTAGTTCACAATCAGAGAAGATTATTTCTGAAAAACCTGCGTTACCAGACACTGCAACACATGGTGGTGGCAAAGAAAAAAGTCTTCTGAATGGCCTAGTTAATGGTTCAAAGATGCCTTCAAAAGGAAGCAATAACAAAAAGGCTAGTTTTGCTGGTGAGATGAAAAATGGTTTGGAATCCAATACTACACCGGTGAGAACCATAATCTTTTGTGTATATATCTCCAAAAGACCTGCATACTTTTAAGATTTACCCCTCTCTTTCTCATTGATTATAATGATACGTTTTTCTTTTATGTTGATTTTTTTCTTTCTTGAAAATATATTTGATCAAGTAATTTTGAACAGGTTCTAAATCGCTGCCCACGGGTTAAGTTTTTAAAACATGCTGGGTCTTTGAACTACAAAAGATTGCTTCCGATTTTGTTGGAAAATGAGAAGTCTAATTCCTGTAAGTATTGGTTTTTATTCTATTGGAAGATGTCACTCAATTTTATAATTTTATTTTTCATTTTTTTGATTGGCACCGTTTTTTAAAACTAAACTTATACTACTTTTAGGTGCTTCGAATAATGATCATCGCCCCAAACTTCAGAAGCTTTTGGATCACACACCACTTCTGCCAATTTCAGATTCAAACTTGCAAGTAACTCCTGGAAGTGATTCAAATGATTGTGATCCTATGGGTGATAGTACAGGAAATTCTGGTGCTCAGCAAGAAACAGAGTTGCAAGCTTGTGACTTAAATAGTGATAGTTTAAGCCCAAGATCTCAACTACAAGATAAACAGATTGTGTCAAATAGACCCTACTATCTCGAGAACTCCTTTGTTTCACCAATTTCTGTTCATAGAGATTTACCAGTCACACCTTTAGGTCCTATAGCTGATCAAGTTGTCACTAGAGAAGAAGTGGGTACACCTGCCTTGTCCAACAGGGAGAAATCACCTGAAACACCTGGATGTTGTCGGAGCTTGTCCGAAATGAAAGTCACAGATCAACTTGATGCCCTTGGCGTTAGTTCCCGAAAAGGAATTTTGAGAAAAAACCCAAGAGGATGCAGAGGGCTTTGCACATGTTTGAACTGTGTTTCTTTTCGCCTTCATGCAGAAAGAGCATTTGAATTTTCTAGAAATCAGCTGCTAGATGCCGAAGAGGTTGCCCAAGACCTTATGAAGGAAGTATCCCATCTCAGAAACATGTTGTTAGAAAGATGTACTGATAATGTCAACGACACTCCTCTTTTGGATGGAAGTCAGGTGAGTGCCACATGATGTTGATATGACTATTACACTAACATTCGTTTTCCTTTCTTTTCTGATCATTTTATCATTCTTCACGATAATAACTGAAATGGCTACATTTCTTTTTATCTGCTAGCAATGCATCTTATTATGCAAAGCTTGTGATGGCTCTCAGTTTAATAATTATCTCATCCGATAAGTTTGGTTATTTAAATACTCGTCTCCTTGCAATTCCTTTCACTATTATTTCATTTCACAAATTGTCTATTTTTCTCTCTTATGATAAAAAAATAAATGAGCTAGATCTTATCAAATATTGTGAAAAATTATCAAGAGAGATTGATATAAATTTATTTTCTCAGGTGTAATATTAACACTAGAGCTTTCATTTCCGACAAGTTTATAATATTTTGCTTATAACCATTTAGAAATAAAACCTCAAGTAAATTCTGGCCCTATAGTGTCCCCCCTATGGTGAGAAATTCCAAGTAACTTTGCCATTTTTTTAGTGCATTTGACCTTATGAGATAGCTTCGTTGTCCTTATTTGACTGTTTTTCTACTGTTCATAAGATTTTCTAGACTTAGTCTAGTTCATCACCCGTGTAACTTAATAAATTCAGCCATTATCAACGTCTTTATATGCAAAATAGTGATAATGTAGCATAAAAATAAGAGGAAAATACTAATCAAACTAAGTCATTTTTTTATTTGAATATTTTCAGGTGAAAGAAGCCTGCAGGAAAGCATCTGAAACAGAACAACTTGCAAAGGATCGACTTAGCCAGATGAATGATGATCTTAACATGCATTGCAGAACACCTGTATGTGCATACCTTATTCCCAAAATTTGTTCCTCCAAATAAACAATTTGTTTATTTTAGCTTGTTTTGTGCAGAGTCTGCAGCGACCAAGTGTTAAGTTTTCAGATCGTGTTGAGGAAAAGGTCATTCAACCAAACAGATTAAAAAATGGTTAA

Protein sequence

>MS.gene09258.t1

MDVIRNSRKRNVRSPPPASSTFTRSKAHRTRSGQIRSGSSSRSKKNQPYSVPVQVPFQEEPSSVPVPVPFCGNDVTKGLSDSEFKNLIHDICNEYCESDSEDDDLVKDPFKKAKRDDANLPCATTKDLRARRIYSPLAGAGDSDREVAELGFYAPSVLENGSVRTESAEISELGFGSPSIAENGDTPVDDARIKSNKILDEPLNFDRGITKLSDEDLGEESLQTTPPNDVICVGLEASCDVRNVEEADTLVVKDMSPAANVAENSSEGQKNSSVQRSKSVLKPRLPLKLFKAPGSFNYKRLMDAMGDNFGIPKLGHCHEDKKVMGGQGLKLPLTSDNHEGSKPETKIDSCTMGDTNGPELASSPMQVDTEKVNGECLSVPSVDDKCLSESKVDLAADFLGARDVGNAFDHGDVKQDSFNRNNLDCAKAADHNGCALEQLGVLNEDCIPMTRDTEICDDIVLNGDQMQSIPQNVKPMDLTRNTQESTVEALYPKAHERNNPLKSKHVHKPYLHGKLIKTPGSVNYRRLLPYFKNLPKDDYGTSGDQAHHKNEEADLYAKEFQLPLPSQSEEASISRQMTVSGSIHDKVDLNTLENNISVNPANMSSHGYQPKLPSFQDSSELPIQFDAKEMAHECLSAPSVEANSEKTVISSKDECLSESATDPCSVMVCDKIVTNGGSPPKEQNLLNVNNDISNLSFEHHSSNEKGFTERKQFVSLEKHESVSRCPPEAQSLNQLDPNMLDAEENETSSHAICKNDDVVVLCHVTISNEESSSQSEKIISEKPALPDTATHGGGKEKSLLNGLVNGSKMPSKGSNNKKASFAGEMKNGLESNTTPVLNRCPRVKFLKHAGSLNYKRLLPILLENEKSNSCASNNDHRPKLQKLLDHTPLLPISDSNLQVTPGSDSNDCDPMGDSTGNSGAQQETELQACDLNSDSLSPRSQLQDKQIVSNRPYYLENSFVSPISVHRDLPVTPLGPIADQVVTREEVGTPALSNREKSPETPGCCRSLSEMKVTDQLDALGVSSRKGILRKNPRGCRGLCTCLNCVSFRLHAERAFEFSRNQLLDAEEVAQDLMKEVSHLRNMLLERCTDNVNDTPLLDGSQVKEACRKASETEQLAKDRLSQMNDDLNMHCRTPSLQRPSVKFSDRVEEKVIQPNRLKNG