Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20920.t1 | KEH43178.1 | 93.6 | 771 | 49 | 0 | 1 | 771 | 1 | 771 | 0.00E+00 | 1355.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20920.t1 | Q0WR66 | 28.1 | 791 | 520 | 21 | 14 | 771 | 1 | 775 | 6.7e-41 | 170.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20920.t1 | A0A072VP18 | 93.6 | 771 | 49 | 0 | 1 | 771 | 1 | 771 | 0.0e+00 | 1355.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene20920 | 0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene049350 | MS.gene20920 | 0.836017 | 1.20E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene20920 | 0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene049441 | MS.gene20920 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene049711 | MS.gene20920 | 0.839008 | 2.05E-57 | -1.69E-46 |
| MS.gene049807 | MS.gene20920 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene049821 | MS.gene20920 | 0.810596 | 1.07E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene20920 | 0.823687 | 1.21E-53 | -1.69E-46 |
| MS.gene050901 | MS.gene20920 | 0.812672 | 3.77E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene20920 | 0.821399 | 4.12E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene20920 | 0.834173 | 3.49E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene20920 | 0.851375 | 9.24E-61 | -1.69E-46 |
| MS.gene05157 | MS.gene20920 | 0.810373 | 1.19E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene20920 | 0.815353 | 9.66E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene20920 | 0.83725 | 5.81E-57 | -1.69E-46 |
| MS.gene051700 | MS.gene20920 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene20920 | 0.829613 | 4.67E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene20920 | 0.859212 | 4.83E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene20920 | 0.822175 | 2.73E-53 | -1.69E-46 |
| MS.gene052016 | MS.gene20920 | 0.81117 | 8.00E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene20920 | 0.81163 | 6.36E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene20920 | 0.802755 | 4.83E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene20920 | 0.815295 | 9.95E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene20920 | 0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene20920 | 0.805626 | 1.22E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene20920 | 0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene20920 | 0.844268 | 8.40E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene20920 | 0.838967 | 2.10E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene20920 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene20920 | 0.842188 | 3.01E-58 | -1.69E-46 |
| MS.gene053536 | MS.gene20920 | 0.832704 | 8.12E-56 | -1.69E-46 |
| MS.gene053538 | MS.gene20920 | 0.833023 | 6.77E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene20920 | 0.803379 | 3.58E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene20920 | 0.829315 | 5.51E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene20920 | 0.815398 | 9.44E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene20920 | 0.811997 | 5.29E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene20920 | 0.844893 | 5.70E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene20920 | 0.811945 | 5.43E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene20920 | 0.818652 | 1.75E-52 | -1.69E-46 |
| MS.gene055144 | MS.gene20920 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene20920 | 0.857871 | 1.21E-62 | -1.69E-46 |
| MS.gene055466 | MS.gene20920 | 0.841599 | 4.31E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene20920 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene20920 | 0.830244 | 3.27E-55 | -1.69E-46 |
| MS.gene055513 | MS.gene20920 | 0.811743 | 6.01E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene20920 | 0.869331 | 3.35E-66 | -1.69E-46 |
| MS.gene055580 | MS.gene20920 | -0.834892 | 2.30E-56 | -1.69E-46 |
| MS.gene055890 | MS.gene20920 | 0.81323 | 2.84E-51 | -1.69E-46 |
| MS.gene055891 | MS.gene20920 | 0.824584 | 7.46E-54 | -1.69E-46 |
| MS.gene056005 | MS.gene20920 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene20920 | -0.806795 | 6.92E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene20920 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene056169 | MS.gene20920 | 0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene056215 | MS.gene20920 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene20920 | 0.83973 | 1.33E-57 | -1.69E-46 |
| MS.gene056507 | MS.gene20920 | 0.8136 | 2.36E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene20920 | 0.827041 | 1.95E-54 | -1.69E-46 |
| MS.gene057082 | MS.gene20920 | 0.826601 | 2.48E-54 | -1.69E-46 |
| MS.gene057294 | MS.gene20920 | 0.83674 | 7.84E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene20920 | 0.821167 | 4.66E-53 | -1.69E-46 |
| MS.gene058087 | MS.gene20920 | 0.809989 | 1.44E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene20920 | 0.802587 | 5.23E-49 | -1.69E-46 |
| MS.gene058649 | MS.gene20920 | 0.82598 | 3.49E-54 | -1.69E-46 |
| MS.gene058668 | MS.gene20920 | 0.855437 | 6.31E-62 | -1.69E-46 |
| MS.gene058862 | MS.gene20920 | 0.800363 | 1.49E-48 | -1.69E-46 |
| MS.gene05894 | MS.gene20920 | 0.846046 | 2.78E-59 | -1.69E-46 |
| MS.gene059084 | MS.gene20920 | 0.802098 | 6.59E-49 | -1.69E-46 |
| MS.gene059424 | MS.gene20920 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene20920 | 0.812699 | 3.72E-51 | -1.69E-46 |
| MS.gene059625 | MS.gene20920 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene20920 | 0.8177 | 2.88E-52 | -1.69E-46 |
| MS.gene060519 | MS.gene20920 | 0.835427 | 1.69E-56 | -1.69E-46 |
| MS.gene060587 | MS.gene20920 | 0.823634 | 1.25E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene20920 | 0.818097 | 2.34E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20920.t1 | MTR_1g085710 | 96.368 | 771 | 28 | 0 | 1 | 771 | 1 | 771 | 0.0 | 1524 |
| MS.gene20920.t1 | MTR_1g085710 | 96.306 | 758 | 28 | 0 | 14 | 771 | 1 | 758 | 0.0 | 1495 |
| MS.gene20920.t1 | MTR_7g007420 | 75.510 | 49 | 11 | 1 | 1 | 48 | 35 | 83 | 6.99e-15 | 73.9 |
| MS.gene20920.t1 | MTR_8g064920 | 74.468 | 47 | 11 | 1 | 11 | 56 | 74 | 120 | 2.17e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20920.t1 | AT2G46980 | 31.297 | 802 | 484 | 23 | 14 | 773 | 1 | 777 | 4.97e-78 | 267 |
| MS.gene20920.t1 | AT2G46980 | 30.923 | 802 | 487 | 23 | 14 | 773 | 1 | 777 | 7.86e-76 | 261 |
| MS.gene20920.t1 | AT2G46980 | 31.000 | 800 | 485 | 23 | 14 | 771 | 1 | 775 | 9.73e-76 | 261 |
| MS.gene20920.t1 | AT2G46980 | 30.769 | 767 | 464 | 23 | 14 | 738 | 1 | 742 | 2.35e-66 | 235 |
| MS.gene20920.t1 | AT2G46980 | 29.427 | 751 | 449 | 25 | 14 | 715 | 1 | 719 | 3.69e-49 | 185 |
| MS.gene20920.t1 | AT2G46980 | 27.801 | 482 | 306 | 16 | 14 | 473 | 1 | 462 | 4.58e-24 | 107 |
Find 163 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGAAGACGCTTTCTTTC+TGG | 0.070190 | 1.3:+60871663 | None:intergenic |
| TACCCTTTCCCTGTTGCTTC+TGG | 0.106646 | 1.3:+60871644 | None:intergenic |
| GCTAGTTTACTGGTCTCTTC+TGG | 0.176822 | 1.3:-60872171 | MS.gene20920:CDS |
| GAGGTTACCCTTTCTGTATT+TGG | 0.210745 | 1.3:+60872348 | None:intergenic |
| TATTGACATCATTTGCCTTT+TGG | 0.217310 | 1.3:+60871083 | None:intergenic |
| TAACAAAATCATTTCTCTTC+TGG | 0.219693 | 1.3:+60871770 | None:intergenic |
| CAAGAACCCTCCACCGCTTT+TGG | 0.222957 | 1.3:+60872243 | None:intergenic |
| AATAATTACAAGAAGTTTGA+TGG | 0.270856 | 1.3:-60872066 | MS.gene20920:CDS |
| GTTGATATTTCCCATCTTAG+AGG | 0.277065 | 1.3:+60872329 | None:intergenic |
| GAGCCTGAATCCTGAGTCTT+AGG | 0.277672 | 1.3:+60871844 | None:intergenic |
| CTCTGCCTCTCTGGAAATTA+TGG | 0.279679 | 1.3:+60871615 | None:intergenic |
| ATTCAGTTTGTTCTTAAGTT+TGG | 0.281747 | 1.3:+60869402 | None:intergenic |
| TCCCCTAAGACTCAGGATTC+AGG | 0.289814 | 1.3:-60871847 | MS.gene20920:CDS |
| TGTTCCCTTGTTGTGAAGTT+TGG | 0.292251 | 1.3:+60870986 | None:intergenic |
| AAGAAGTGGTCCCCAATATT+TGG | 0.292955 | 1.3:+60871869 | None:intergenic |
| CTAGTTTACTGGTCTCTTCT+GGG | 0.293971 | 1.3:-60872170 | MS.gene20920:CDS |
| TATGAATGACTGTCGGAGTA+TGG | 0.302920 | 1.3:-60872478 | MS.gene20920:CDS |
| GATGAAGCTATGCCAAATAT+TGG | 0.305789 | 1.3:-60871881 | MS.gene20920:CDS |
| CATAGAAAATCTTGGTCTTT+CGG | 0.311086 | 1.3:+60871048 | None:intergenic |
| CAGGAAAAGAGTTCCAAAAT+AGG | 0.331447 | 1.3:-60871490 | MS.gene20920:CDS |
| CAACAAAACCGCTAGTTTAC+TGG | 0.332384 | 1.3:-60872181 | MS.gene20920:CDS |
| ACCCTTTCCCTGTTGCTTCT+GGG | 0.332749 | 1.3:+60871645 | None:intergenic |
| ATGAAGCTATGCCAAATATT+GGG | 0.336677 | 1.3:-60871880 | MS.gene20920:CDS |
| TCCGCTAAAGAGAAGCAAAT+TGG | 0.336973 | 1.3:-60872270 | MS.gene20920:CDS |
| AAATAGTTCTACACTCTTGC+TGG | 0.342385 | 1.3:+60871209 | None:intergenic |
| GGCTGTTGAACTGTTCGCTT+TGG | 0.345466 | 1.3:-60869431 | MS.gene20920:CDS |
| GTCCTGACCATACTCGTAAA+AGG | 0.348510 | 1.3:-60871705 | MS.gene20920:CDS |
| GCAGATCAGATAGAGATAAA+AGG | 0.348735 | 1.3:-60868129 | MS.gene20920:CDS |
| CGTACAAGTCTGTTTCAATC+TGG | 0.350247 | 1.3:+60869299 | None:intergenic |
| AATAAAATGGGAGGATTTAG+TGG | 0.350584 | 1.3:-60871361 | MS.gene20920:CDS |
| TTTATTTGTGGTATCACTTT+CGG | 0.357386 | 1.3:+60871447 | None:intergenic |
| GCCATAAAAGTGCTTAAATT+AGG | 0.357455 | 1.3:+60871016 | None:intergenic |
| CATGGAAAAGGGTGTGGAGC+TGG | 0.358563 | 1.3:-60872129 | MS.gene20920:CDS |
| AAAGGCCAGTCACTCGTTCT+AGG | 0.359424 | 1.3:-60871687 | MS.gene20920:CDS |
| CAAAAGCGGTGGAGGGTTCT+TGG | 0.361931 | 1.3:-60872242 | MS.gene20920:CDS |
| TTTGGTGTGTCTTTGGTGTT+GGG | 0.362181 | 1.3:+60871101 | None:intergenic |
| CTTAGGTCCGCTTCTTGAGC+TGG | 0.365048 | 1.3:+60872392 | None:intergenic |
| GAAAATTTCCATAGGAGTTA+TGG | 0.365064 | 1.3:-60872427 | MS.gene20920:CDS |
| TCCAATTTGCTTCTCTTTAG+CGG | 0.379522 | 1.3:+60872269 | None:intergenic |
| AGGAAAAGAGTTCCAAAATA+GGG | 0.383061 | 1.3:-60871489 | MS.gene20920:CDS |
| CTTGGTCTTTCGGTTGATGC+TGG | 0.383100 | 1.3:+60871058 | None:intergenic |
| ACAGGTCCATCCCCTTTCTT+AGG | 0.383656 | 1.3:+60872375 | None:intergenic |
| TTGATGCTTCTCTGCCTCTC+TGG | 0.387482 | 1.3:+60871606 | None:intergenic |
| TGAACTGTTCGCTTTGGAAT+TGG | 0.390072 | 1.3:-60869425 | MS.gene20920:CDS |
| AACTTCTTGTAATTATTAGA+AGG | 0.396004 | 1.3:+60872072 | None:intergenic |
| AGCGTCTTCCCAGAAGCAAC+AGG | 0.406329 | 1.3:-60871653 | MS.gene20920:CDS |
| GACACTGAAGAACCATCATT+TGG | 0.413292 | 1.3:+60871529 | None:intergenic |
| CGATTCTGCCATAACTCCTA+TGG | 0.413670 | 1.3:+60872419 | None:intergenic |
| TGTGTCTTTGGTGTTGGGCT+AGG | 0.418778 | 1.3:+60871106 | None:intergenic |
| ATGGAAAAGGGTGTGGAGCT+GGG | 0.430586 | 1.3:-60872128 | MS.gene20920:CDS |
| AAAAGGCTGTGCAAACATAA+AGG | 0.434348 | 1.3:-60869767 | MS.gene20920:CDS |
| TATTGTTTGCTGTTTGTGTT+GGG | 0.435133 | 1.3:+60871272 | None:intergenic |
| AGGATGGGAGTGCTGAAGAA+AGG | 0.441359 | 1.3:-60872008 | MS.gene20920:CDS |
| GGATGGGAGTGCTGAAGAAA+GGG | 0.442715 | 1.3:-60872007 | MS.gene20920:CDS |
| AACACCAAAGACACACCAAA+AGG | 0.447325 | 1.3:-60871098 | MS.gene20920:CDS |
| GTATTGTTTGCTGTTTGTGT+TGG | 0.448414 | 1.3:+60871271 | None:intergenic |
| TGATGATTTGCCTCTGTAGT+AGG | 0.451423 | 1.3:+60872207 | None:intergenic |
| AAGGATGAGCCTCATGGAAA+AGG | 0.452185 | 1.3:-60872141 | MS.gene20920:CDS |
| TTGAAATTCATCTTGCGACT+TGG | 0.452911 | 1.3:+60871168 | None:intergenic |
| CCAAACCTTGACGACGTCCT+TGG | 0.457455 | 1.3:+60870740 | None:intergenic |
| TTACACTTAAACCTGTCAAA+AGG | 0.457973 | 1.3:-60869784 | MS.gene20920:CDS |
| AGAAAGGGTAACCTCTAAGA+TGG | 0.458911 | 1.3:-60872340 | MS.gene20920:CDS |
| TTAATCTCAGCTGTTTCTGC+TGG | 0.464220 | 1.3:+60868223 | None:intergenic |
| CTCTAGAAAGAAGGGAAAGA+AGG | 0.469135 | 1.3:-60872028 | MS.gene20920:CDS |
| GGTGTCTTAAATTGAAATGT+AGG | 0.471164 | 1.3:+60871142 | None:intergenic |
| TCAATAAATCAAAGAGAAAA+CGG | 0.473721 | 1.3:-60869174 | MS.gene20920:CDS |
| TTTATTCCCAAGTGAAAATG+AGG | 0.474158 | 1.3:+60871378 | None:intergenic |
| CGGATAGAAACAAGATTTGA+AGG | 0.475394 | 1.3:-60869154 | MS.gene20920:intron |
| CACTTCTTCCCCTAAGACTC+AGG | 0.478895 | 1.3:-60871854 | MS.gene20920:CDS |
| CAGTGGTGGATCAGTCTTTG+AGG | 0.483394 | 1.3:+60871411 | None:intergenic |
| ATCATCAGATTCATCATATG+AGG | 0.484156 | 1.3:-60870773 | MS.gene20920:CDS |
| AGCCTGAATCCTGAGTCTTA+GGG | 0.484557 | 1.3:+60871845 | None:intergenic |
| TAGCAGAAGCTCTAGAAAGA+AGG | 0.485858 | 1.3:-60872037 | MS.gene20920:CDS |
| GGGAATGAACATCCTGCAGC+TGG | 0.491861 | 1.3:+60869320 | None:intergenic |
| ATGGTCCTCATAGAAAATCT+TGG | 0.494427 | 1.3:+60871040 | None:intergenic |
| AGCAGAAGCTCTAGAAAGAA+GGG | 0.495837 | 1.3:-60872036 | MS.gene20920:CDS |
| TTCCCAGAAGCAACAGGGAA+AGG | 0.501065 | 1.3:-60871647 | MS.gene20920:CDS |
| GGAAAAGAGTTCCAAAATAG+GGG | 0.502193 | 1.3:-60871488 | MS.gene20920:CDS |
| TGGAGGTCCAAAAGCGGTGG+AGG | 0.503297 | 1.3:-60872250 | MS.gene20920:CDS |
| TCAAGAAGCGGACCTAAGAA+AGG | 0.503551 | 1.3:-60872387 | MS.gene20920:CDS |
| AAAACAGTACAGAAAATTTG+AGG | 0.505203 | 1.3:-60871903 | MS.gene20920:CDS |
| CAGTGCTTCTGCAGTCCTGT+AGG | 0.507098 | 1.3:+60868166 | None:intergenic |
| CTTTCTGTATTTGGCACGAC+AGG | 0.508106 | 1.3:+60872357 | None:intergenic |
| GAAAGAAGGGAAAGAAGGAT+GGG | 0.509221 | 1.3:-60872023 | MS.gene20920:CDS |
| CAAGAAGCGGACCTAAGAAA+GGG | 0.512363 | 1.3:-60872386 | MS.gene20920:CDS |
| AGAGGTTAATCTACACCTAC+AGG | 0.513006 | 1.3:-60868181 | MS.gene20920:CDS |
| TCCCAGAAGCAACAGGGAAA+GGG | 0.514842 | 1.3:-60871646 | MS.gene20920:CDS |
| GGAGAAAGAGACAGAAGAGC+AGG | 0.515117 | 1.3:-60870800 | MS.gene20920:CDS |
| GGGAAGAAGGATGAGCCTCA+TGG | 0.521134 | 1.3:-60872147 | MS.gene20920:CDS |
| ACTGATCCACCACTGTATGC+AGG | 0.522412 | 1.3:-60871403 | MS.gene20920:CDS |
| AGACATACATTTCCAGCTGC+AGG | 0.524462 | 1.3:-60869332 | MS.gene20920:CDS |
| AGAAAGAAGGGAAAGAAGGA+TGG | 0.524935 | 1.3:-60872024 | MS.gene20920:CDS |
| ATTAATCTACGATAGATTCA+AGG | 0.527030 | 1.3:-60868205 | MS.gene20920:CDS |
| AGGATGAGCCTCATGGAAAA+GGG | 0.527549 | 1.3:-60872140 | MS.gene20920:CDS |
| GCTTCTGAACAGACTCAAGA+TGG | 0.527585 | 1.3:-60869575 | MS.gene20920:CDS |
| GAAAATTACATCCACACAGC+AGG | 0.527992 | 1.3:-60867106 | MS.gene20920:CDS |
| GCAGCTTCAGTGTCTTCAAA+AGG | 0.529876 | 1.3:-60869722 | MS.gene20920:intron |
| GTACAAGTCTGTTTCAATCT+GGG | 0.531874 | 1.3:+60869300 | None:intergenic |
| TTTCTCTTCTGGTTCAAGTG+TGG | 0.531914 | 1.3:+60871781 | None:intergenic |
| AGACTCAAGATGGATTTGTC+AGG | 0.533145 | 1.3:-60869565 | MS.gene20920:intron |
| TAGTTTACTGGTCTCTTCTG+GGG | 0.536940 | 1.3:-60872169 | MS.gene20920:CDS |
| ATGAATGACTGTCGGAGTAT+GGG | 0.537659 | 1.3:-60872477 | MS.gene20920:CDS |
| GAGTGCTGAAGAAAGGGTAG+AGG | 0.538673 | 1.3:-60872001 | MS.gene20920:CDS |
| GAGCCTCATGGAAAAGGGTG+TGG | 0.539371 | 1.3:-60872135 | MS.gene20920:CDS |
| GCTAGAAGAAAGCGATTCGA+TGG | 0.542873 | 1.3:-60869603 | MS.gene20920:CDS |
| TGGAAAAGGGTGTGGAGCTG+GGG | 0.543038 | 1.3:-60872127 | MS.gene20920:CDS |
| AGTTTACTGGTCTCTTCTGG+GGG | 0.543781 | 1.3:-60872168 | MS.gene20920:CDS |
| GGAGAAAGCAAGGCTGTAGG+AGG | 0.544746 | 1.3:-60872303 | MS.gene20920:CDS |
| GGGCTAGGAGAGCTCAAAGT+AGG | 0.545743 | 1.3:+60871121 | None:intergenic |
| GTCTTGATGAAGTTTATTTG+TGG | 0.548101 | 1.3:+60871435 | None:intergenic |
| CTGATCCACCACTGTATGCA+GGG | 0.552488 | 1.3:-60871402 | MS.gene20920:CDS |
| AACAGACTTCAAAATTTCTG+AGG | 0.552915 | 1.3:+60869360 | None:intergenic |
| CTGGTCCTAGAACGAGTGAC+TGG | 0.560842 | 1.3:+60871682 | None:intergenic |
| CTACGATAGATTCAAGGAAG+AGG | 0.564214 | 1.3:-60868199 | MS.gene20920:CDS |
| GAAAGGGTAACCTCTAAGAT+GGG | 0.566254 | 1.3:-60872339 | MS.gene20920:CDS |
| CTGTCGTGCCAAATACAGAA+AGG | 0.567724 | 1.3:-60872356 | MS.gene20920:CDS |
| CATCATTTGGAAAAGCATCT+CGG | 0.570662 | 1.3:+60871542 | None:intergenic |
| AGGCTCTCACAATTGTAAGA+AGG | 0.571813 | 1.3:-60871827 | MS.gene20920:CDS |
| GGCTAAATCGCCTACTACAG+AGG | 0.576655 | 1.3:-60872217 | MS.gene20920:CDS |
| AGCGGACCTAAGAAAGGGGA+TGG | 0.577391 | 1.3:-60872381 | MS.gene20920:CDS |
| TAATATACTTCAGCATATGA+AGG | 0.579232 | 1.3:-60870860 | MS.gene20920:intron |
| TGGTTCAAGTGTGGCTTGAG+CGG | 0.586860 | 1.3:+60871790 | None:intergenic |
| CGGAGCCAAACTTCACAACA+AGG | 0.591553 | 1.3:-60870991 | MS.gene20920:CDS |
| TGTCGTGCCAAATACAGAAA+GGG | 0.596262 | 1.3:-60872355 | MS.gene20920:CDS |
| ATCACAAGTTGAAGAATCAG+TGG | 0.598267 | 1.3:-60867154 | MS.gene20920:CDS |
| AACATCCAAGGACGTCGTCA+AGG | 0.600753 | 1.3:-60870745 | MS.gene20920:intron |
| AAAAGTGCTTAAATTAGGCA+TGG | 0.600818 | 1.3:+60871021 | None:intergenic |
| GCCTGAATCCTGAGTCTTAG+GGG | 0.602304 | 1.3:+60871846 | None:intergenic |
| AGCGGTGGAGGGTTCTTGGA+TGG | 0.603226 | 1.3:-60872238 | MS.gene20920:CDS |
| CTGAGTCTTAGGGGAAGAAG+TGG | 0.603504 | 1.3:+60871855 | None:intergenic |
| ACAGGAGAAAGCAAGGCTGT+AGG | 0.607013 | 1.3:-60872306 | MS.gene20920:CDS |
| TGAAGCTATGCCAAATATTG+GGG | 0.607934 | 1.3:-60871879 | MS.gene20920:CDS |
| CAGTCAAGGAAAATTTCCAT+AGG | 0.608406 | 1.3:-60872435 | MS.gene20920:CDS |
| TCGAAAGCCAGCTCAAGAAG+CGG | 0.608515 | 1.3:-60872399 | MS.gene20920:CDS |
| TTCATCCGTCTAGCCAGTCA+AGG | 0.611059 | 1.3:-60872449 | MS.gene20920:CDS |
| GCTAAAGAGAAGCAAATTGG+AGG | 0.615140 | 1.3:-60872267 | MS.gene20920:CDS |
| TATCAACACAGGAGAAAGCA+AGG | 0.616108 | 1.3:-60872313 | MS.gene20920:CDS |
| CAGATTCATCATATGAGGAG+AGG | 0.624272 | 1.3:-60870768 | MS.gene20920:CDS |
| GAGAAAGCAAGGCTGTAGGA+GGG | 0.624273 | 1.3:-60872302 | MS.gene20920:CDS |
| TCACTTGGGAATAAAATGGG+AGG | 0.626636 | 1.3:-60871370 | MS.gene20920:CDS |
| AAGCACTGTAGAAGATCTCG+AGG | 0.629833 | 1.3:-60868151 | MS.gene20920:CDS |
| GGAGGTCCAAAAGCGGTGGA+GGG | 0.635123 | 1.3:-60872249 | MS.gene20920:CDS |
| AAAGAGACAGAAGAGCAGGA+TGG | 0.636909 | 1.3:-60870796 | MS.gene20920:CDS |
| AATTGGAGGTCCAAAAGCGG+TGG | 0.644213 | 1.3:-60872253 | MS.gene20920:CDS |
| AAGATGGGAAATATCAACAC+AGG | 0.645515 | 1.3:-60872324 | MS.gene20920:CDS |
| AGATCAGCGTGTAGAACATG+AGG | 0.645710 | 1.3:-60871248 | MS.gene20920:CDS |
| ACAAATACTTGCCTGCTGTG+TGG | 0.658445 | 1.3:+60867095 | None:intergenic |
| AGGAGCATATGAATGACTGT+CGG | 0.659937 | 1.3:-60872485 | MS.gene20920:CDS |
| GTTTACTGGTCTCTTCTGGG+GGG | 0.661618 | 1.3:-60872167 | MS.gene20920:CDS |
| GAGGCCCCTGCATACAGTGG+TGG | 0.661891 | 1.3:+60871397 | None:intergenic |
| GAAAAGAGTTCCAAAATAGG+GGG | 0.663528 | 1.3:-60871487 | MS.gene20920:CDS |
| TCACAATTGTAAGAAGGACA+AGG | 0.670048 | 1.3:-60871821 | MS.gene20920:CDS |
| GCGTCTTCCCAGAAGCAACA+GGG | 0.671850 | 1.3:-60871652 | MS.gene20920:CDS |
| TATGAGGAGAGGAACATCCA+AGG | 0.676146 | 1.3:-60870757 | MS.gene20920:CDS |
| AAGAAGCGGACCTAAGAAAG+GGG | 0.681515 | 1.3:-60872385 | MS.gene20920:CDS |
| GCAAATTGGAGGTCCAAAAG+CGG | 0.688099 | 1.3:-60872256 | MS.gene20920:CDS |
| TGATCCACCACTGTATGCAG+GGG | 0.689823 | 1.3:-60871401 | MS.gene20920:CDS |
| AAGTACCATAATTTCCAGAG+AGG | 0.694398 | 1.3:-60871620 | MS.gene20920:CDS |
| GGAGCCAAACTTCACAACAA+GGG | 0.697242 | 1.3:-60870990 | MS.gene20920:CDS |
| GAGCAAAGCATACTGCTGAG+AGG | 0.697520 | 1.3:-60869814 | MS.gene20920:CDS |
| AGAAGAGACCAGTAAACTAG+CGG | 0.707964 | 1.3:+60872173 | None:intergenic |
| AATGAGGCCCCTGCATACAG+TGG | 0.725322 | 1.3:+60871394 | None:intergenic |
| CAACAATGGATACTGAAGCG+CGG | 0.729741 | 1.3:-60872890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATATTAAGATATTCA+TGG | - | chr1.3:60867452-60867471 | MS.gene20920:intron | 10.0% |
| !!! | TTAAATTCTAAGAATATATT+AGG | - | chr1.3:60871135-60871154 | MS.gene20920:CDS | 10.0% |
| !! | AAGTCAAATAGTATATATAA+AGG | + | chr1.3:60870104-60870123 | None:intergenic | 15.0% |
| !! | ATATATAATTGTTATCTGAT+TGG | - | chr1.3:60869981-60870000 | MS.gene20920:intron | 15.0% |
| !! | TATATTTAAACTGTATAGTT+CGG | - | chr1.3:60871293-60871312 | MS.gene20920:CDS | 15.0% |
| !! | TTTGGAAATAGAATTTAAAA+GGG | + | chr1.3:60870943-60870962 | None:intergenic | 15.0% |
| !!! | ATTTTACACTTAATATTCTT+TGG | - | chr1.3:60870995-60871014 | MS.gene20920:CDS | 15.0% |
| !!! | GTGTTTTTATTTAACTAATA+TGG | - | chr1.3:60870885-60870904 | MS.gene20920:intron | 15.0% |
| !!! | TCTTTATTTACACATAAAAA+CGG | + | chr1.3:60872524-60872543 | None:intergenic | 15.0% |
| !!! | TTTTGGAAATAGAATTTAAA+AGG | + | chr1.3:60870944-60870963 | None:intergenic | 15.0% |
| !! | AACACAAATATATTTAAGCA+AGG | + | chr1.3:60870870-60870889 | None:intergenic | 20.0% |
| !! | AACTTCTTGTAATTATTAGA+AGG | + | chr1.3:60867908-60867927 | None:intergenic | 20.0% |
| !! | AATAATTACAAGAAGTTTGA+TGG | - | chr1.3:60867911-60867930 | MS.gene20920:intron | 20.0% |
| !! | ATATTTAAACTGTATAGTTC+GGG | - | chr1.3:60871294-60871313 | MS.gene20920:CDS | 20.0% |
| !! | ATTACTGTATGTAAGATATA+AGG | - | chr1.3:60872427-60872446 | MS.gene20920:CDS | 20.0% |
| !! | ATTATTGACAAGTATTATCT+AGG | - | chr1.3:60872741-60872760 | MS.gene20920:intron | 20.0% |
| !! | CATAAATGTTTAACAATATC+AGG | - | chr1.3:60871449-60871468 | MS.gene20920:CDS | 20.0% |
| !! | CTTAACTACTAATTTATAAC+AGG | + | chr1.3:60872086-60872105 | None:intergenic | 20.0% |
| !! | TAAAGCAAAATACAAAAACA+CGG | + | chr1.3:60869095-60869114 | None:intergenic | 20.0% |
| !! | TAAGAATATATTAGGATGAA+GGG | - | chr1.3:60871143-60871162 | MS.gene20920:CDS | 20.0% |
| !! | TATCATATTAACATGAAACT+TGG | + | chr1.3:60871423-60871442 | None:intergenic | 20.0% |
| !! | TCAAATAGTATATATAAAGG+AGG | + | chr1.3:60870101-60870120 | None:intergenic | 20.0% |
| !! | TCAATAAATCAAAGAGAAAA+CGG | - | chr1.3:60870803-60870822 | MS.gene20920:CDS | 20.0% |
| !!! | AATATTGTTTTGATGATTTC+TGG | - | chr1.3:60867274-60867293 | MS.gene20920:intron | 20.0% |
| !!! | ATATTGTCTTTTGAAGAAAA+AGG | - | chr1.3:60868403-60868422 | MS.gene20920:intron | 20.0% |
| !!! | ATATTTTACTTATGATAGTC+TGG | - | chr1.3:60867192-60867211 | MS.gene20920:intron | 20.0% |
| !!! | ATTTACTTTTCTCCTTTATA+AGG | + | chr1.3:60871058-60871077 | None:intergenic | 20.0% |
| !!! | CTTTATTTACACATAAAAAC+GGG | + | chr1.3:60872523-60872542 | None:intergenic | 20.0% |
| !!! | GTCATTTTTTTGAACATTAA+AGG | - | chr1.3:60867381-60867400 | MS.gene20920:intron | 20.0% |
| !!! | GTTTAGTTTTAAGAAGAAAT+CGG | + | chr1.3:60869371-60869390 | None:intergenic | 20.0% |
| !!! | TATTGTCTTTTGAAGAAAAA+GGG | - | chr1.3:60868404-60868423 | MS.gene20920:intron | 20.0% |
| !!! | TCTTGTACTTATTTTTTATC+AGG | - | chr1.3:60869331-60869350 | MS.gene20920:CDS | 20.0% |
| ! | AAAACAGTACAGAAAATTTG+AGG | - | chr1.3:60868074-60868093 | MS.gene20920:intron | 25.0% |
| ! | AAAAGCAAAGTATGAAAACT+CGG | - | chr1.3:60871879-60871898 | MS.gene20920:CDS | 25.0% |
| ! | ATACTTGTCAATAATGCAAA+TGG | + | chr1.3:60872736-60872755 | None:intergenic | 25.0% |
| ! | ATGACAAATGCTATTAAGAA+AGG | + | chr1.3:60871641-60871660 | None:intergenic | 25.0% |
| ! | ATTAATCTACGATAGATTCA+AGG | - | chr1.3:60871772-60871791 | MS.gene20920:CDS | 25.0% |
| ! | CATGATTGGAAATAATTACT+TGG | - | chr1.3:60869622-60869641 | MS.gene20920:intron | 25.0% |
| ! | CTAACAAACAAAAATTTCTG+CGG | + | chr1.3:60872125-60872144 | None:intergenic | 25.0% |
| ! | CTAAGAATATATTAGGATGA+AGG | - | chr1.3:60871142-60871161 | MS.gene20920:CDS | 25.0% |
| ! | CTTGAAACACTAGAATAATA+AGG | + | chr1.3:60869034-60869053 | None:intergenic | 25.0% |
| ! | GAATATATCCTATGTATTGT+AGG | - | chr1.3:60872779-60872798 | MS.gene20920:intron | 25.0% |
| ! | GCTAAGAAAACATATTTACT+AGG | + | chr1.3:60869509-60869528 | None:intergenic | 25.0% |
| ! | GTTTGAAGATTAAATACATC+AGG | + | chr1.3:60870327-60870346 | None:intergenic | 25.0% |
| ! | TAACAAAATCATTTCTCTTC+TGG | + | chr1.3:60868210-60868229 | None:intergenic | 25.0% |
| ! | TAACAAACAAAAATTTCTGC+GGG | + | chr1.3:60872124-60872143 | None:intergenic | 25.0% |
| ! | TAACTTTAGTTGCAATATCA+GGG | - | chr1.3:60870054-60870073 | MS.gene20920:intron | 25.0% |
| ! | TAATATACTTCAGCATATGA+AGG | - | chr1.3:60869117-60869136 | MS.gene20920:intron | 25.0% |
| ! | TAGCAAAAGTTCCAAAAAAT+AGG | - | chr1.3:60869525-60869544 | MS.gene20920:intron | 25.0% |
| ! | TATAACCTAATACAGCTTAA+CGG | + | chr1.3:60872377-60872396 | None:intergenic | 25.0% |
| ! | TATGTAAGTGTTAGAAACAA+AGG | - | chr1.3:60867339-60867358 | MS.gene20920:intron | 25.0% |
| ! | TCATAGAAAAGAAAAATCTC+TGG | - | chr1.3:60869156-60869175 | MS.gene20920:CDS | 25.0% |
| ! | TCTGAAAAAAAATGTTTCAG+AGG | - | chr1.3:60870766-60870785 | MS.gene20920:CDS | 25.0% |
| ! | TTAACTTTAGTTGCAATATC+AGG | - | chr1.3:60870053-60870072 | MS.gene20920:intron | 25.0% |
| ! | TTTAAAAGGGAGATATGAAA+AGG | + | chr1.3:60870930-60870949 | None:intergenic | 25.0% |
| ! | TTTATTTGTGGTATCACTTT+CGG | + | chr1.3:60868533-60868552 | None:intergenic | 25.0% |
| ! | TTTGAAAATAATAACTGACC+AGG | + | chr1.3:60869818-60869837 | None:intergenic | 25.0% |
| !! | ATTCAGCATTATTGTTCTTT+TGG | - | chr1.3:60871185-60871204 | MS.gene20920:CDS | 25.0% |
| !! | ATTCAGTTTGTTCTTAAGTT+TGG | + | chr1.3:60870578-60870597 | None:intergenic | 25.0% |
| !! | ATTTTCACTTGGGAATAAAA+TGG | - | chr1.3:60868603-60868622 | MS.gene20920:intron | 25.0% |
| !! | TACTAGTACTTTGTTTGATT+AGG | - | chr1.3:60867222-60867241 | MS.gene20920:intron | 25.0% |
| !! | TGGATTTGAACTATATTTTC+AGG | - | chr1.3:60867472-60867491 | MS.gene20920:intron | 25.0% |
| !! | TGGTCAGTTATTATTTTCAA+AGG | - | chr1.3:60869817-60869836 | MS.gene20920:CDS | 25.0% |
| !! | TTATCAGTCTCAAAAACTTT+TGG | + | chr1.3:60868022-60868041 | None:intergenic | 25.0% |
| !! | TTTTCACTTGGGAATAAAAT+GGG | - | chr1.3:60868604-60868623 | MS.gene20920:intron | 25.0% |
| !! | TTTTTGTTAAGAGGAATAGA+AGG | + | chr1.3:60871728-60871747 | None:intergenic | 25.0% |
| !!! | ATGTTAGAAAGCCTATTTTT+TGG | + | chr1.3:60869539-60869558 | None:intergenic | 25.0% |
| !!! | TTGGGTATAATTCTTTTTTG+TGG | + | chr1.3:60868690-60868709 | None:intergenic | 25.0% |
| !!! | TTGGTTCACTTAATTTGTTT+TGG | - | chr1.3:60871216-60871235 | MS.gene20920:CDS | 25.0% |
| !!! | TTTCATACTTTGCTTTTCAA+GGG | + | chr1.3:60871876-60871895 | None:intergenic | 25.0% |
| !!! | TTTTCATACTTTGCTTTTCA+AGG | + | chr1.3:60871877-60871896 | None:intergenic | 25.0% |
| !!! | TTTTGAAGAACATACAAGAT+TGG | + | chr1.3:60869469-60869488 | None:intergenic | 25.0% |
| !!! | TTTTGAGACTGATAAAACAA+AGG | - | chr1.3:60868027-60868046 | MS.gene20920:intron | 25.0% |
| !!! | TTTTTTGAACATTAAAGGCT+AGG | - | chr1.3:60867386-60867405 | MS.gene20920:intron | 25.0% |
| AAATCTGATAAAGACCTATG+TGG | + | chr1.3:60869672-60869691 | None:intergenic | 30.0% | |
| AAATGAATGTAAACTGTGTC+AGG | + | chr1.3:60872570-60872589 | None:intergenic | 30.0% | |
| AACAGACTTCAAAATTTCTG+AGG | + | chr1.3:60870620-60870639 | None:intergenic | 30.0% | |
| AACTATTCAGAGTCATTATG+AGG | + | chr1.3:60871033-60871052 | None:intergenic | 30.0% | |
| AAGAAAACGAGACAAAACAT+CGG | + | chr1.3:60869430-60869449 | None:intergenic | 30.0% | |
| AATAAAATGGGAGGATTTAG+TGG | - | chr1.3:60868616-60868635 | MS.gene20920:intron | 30.0% | |
| AATGAATGTAAACTGTGTCA+GGG | + | chr1.3:60872569-60872588 | None:intergenic | 30.0% | |
| ACAACTATTATGAATGCTCA+GGG | + | chr1.3:60867320-60867339 | None:intergenic | 30.0% | |
| ACTATTTACTGGTGCTTATA+AGG | - | chr1.3:60869749-60869768 | MS.gene20920:CDS | 30.0% | |
| ACTTATGATAGTCTGGAAAT+TGG | - | chr1.3:60867199-60867218 | MS.gene20920:intron | 30.0% | |
| AGGAAAAGAGTTCCAAAATA+GGG | - | chr1.3:60868488-60868507 | MS.gene20920:intron | 30.0% | |
| ATAACCTAATACAGCTTAAC+GGG | + | chr1.3:60872376-60872395 | None:intergenic | 30.0% | |
| ATATATGTTCATACTTCCTG+AGG | + | chr1.3:60869406-60869425 | None:intergenic | 30.0% | |
| ATCATCAGATTCATCATATG+AGG | - | chr1.3:60869204-60869223 | MS.gene20920:intron | 30.0% | |
| ATGAAGCTATGCCAAATATT+GGG | - | chr1.3:60868097-60868116 | MS.gene20920:intron | 30.0% | |
| ATGTTTATGACTATCAGAGA+TGG | - | chr1.3:60872398-60872417 | MS.gene20920:CDS | 30.0% | |
| ATTTACACATAAAAACGGGA+AGG | + | chr1.3:60872519-60872538 | None:intergenic | 30.0% | |
| CAAATTAAGTGAACCAAAAC+AGG | + | chr1.3:60871213-60871232 | None:intergenic | 30.0% | |
| CATGACGAAAATATTGGATA+TGG | + | chr1.3:60871614-60871633 | None:intergenic | 30.0% | |
| CTGAATAGTTCTCCTTATAA+AGG | - | chr1.3:60871043-60871062 | MS.gene20920:CDS | 30.0% | |
| GAAAATTTCCATAGGAGTTA+TGG | - | chr1.3:60867550-60867569 | MS.gene20920:intron | 30.0% | |
| GGAAAACATGACGAAAATAT+TGG | + | chr1.3:60871620-60871639 | None:intergenic | 30.0% | |
| GGTGTCTTAAATTGAAATGT+AGG | + | chr1.3:60868838-60868857 | None:intergenic | 30.0% | |
| GTCTTGATGAAGTTTATTTG+TGG | + | chr1.3:60868545-60868564 | None:intergenic | 30.0% | |
| TACAACTATTATGAATGCTC+AGG | + | chr1.3:60867321-60867340 | None:intergenic | 30.0% | |
| TTACACTTAAACCTGTCAAA+AGG | - | chr1.3:60870193-60870212 | MS.gene20920:intron | 30.0% | |
| TTATGAACTGTGGTTTAGTT+TGG | - | chr1.3:60867153-60867172 | MS.gene20920:CDS | 30.0% | |
| TTATTGAGTTAAAGCTGAAG+TGG | + | chr1.3:60872655-60872674 | None:intergenic | 30.0% | |
| TTTACACATAAAAACGGGAA+GGG | + | chr1.3:60872518-60872537 | None:intergenic | 30.0% | |
| TTTATTCCCAAGTGAAAATG+AGG | + | chr1.3:60868602-60868621 | None:intergenic | 30.0% | |
| ! | AAAGACCAAGATTTTCTATG+AGG | - | chr1.3:60868932-60868951 | MS.gene20920:intron | 30.0% |
| ! | AAGAATCAACTGAGTTTTTG+AGG | - | chr1.3:60872322-60872341 | MS.gene20920:CDS | 30.0% |
| ! | ACTTCAGCTTTAACTCAATA+AGG | - | chr1.3:60872654-60872673 | MS.gene20920:intron | 30.0% |
| ! | ACTTTTGTGTCTTTTGTCTT+TGG | - | chr1.3:60869059-60869078 | MS.gene20920:intron | 30.0% |
| ! | AGAATCAACTGAGTTTTTGA+GGG | - | chr1.3:60872323-60872342 | MS.gene20920:CDS | 30.0% |
| ! | CATAGAAAATCTTGGTCTTT+CGG | + | chr1.3:60868932-60868951 | None:intergenic | 30.0% |
| ! | CTTCAGCTTTAACTCAATAA+GGG | - | chr1.3:60872655-60872674 | MS.gene20920:intron | 30.0% |
| ! | GCCTAATTTAAGCACTTTTA+TGG | - | chr1.3:60868960-60868979 | MS.gene20920:intron | 30.0% |
| ! | GTCTTTAAAGAAAAAGAGTC+AGG | - | chr1.3:60868468-60868487 | MS.gene20920:intron | 30.0% |
| ! | TAACCTGTGATTTGAGATTA+AGG | - | chr1.3:60869712-60869731 | MS.gene20920:intron | 30.0% |
| ! | TATTGACATCATTTGCCTTT+TGG | + | chr1.3:60868897-60868916 | None:intergenic | 30.0% |
| ! | TATTTTGTTACATGCCACAT+AGG | - | chr1.3:60869655-60869674 | MS.gene20920:intron | 30.0% |
| ! | TGGTCTACATTTTTGTTAAG+AGG | + | chr1.3:60871737-60871756 | None:intergenic | 30.0% |
| ! | TTTAAGCACTTTTATGGCTT+CGG | - | chr1.3:60868966-60868985 | MS.gene20920:intron | 30.0% |
| !! | AAAAGTGCTTAAATTAGGCA+TGG | + | chr1.3:60868959-60868978 | None:intergenic | 30.0% |
| !! | ATGATTTTTGCCGATTGTTA+GGG | - | chr1.3:60870525-60870544 | MS.gene20920:intron | 30.0% |
| !! | CTAGCTTTTAATGCATTTTC+TGG | - | chr1.3:60870029-60870048 | MS.gene20920:intron | 30.0% |
| !! | GCCATAAAAGTGCTTAAATT+AGG | + | chr1.3:60868964-60868983 | None:intergenic | 30.0% |
| !! | TATGATTTTTGCCGATTGTT+AGG | - | chr1.3:60870524-60870543 | MS.gene20920:intron | 30.0% |
| !! | TATTGTTTGCTGTTTGTGTT+GGG | + | chr1.3:60868708-60868727 | None:intergenic | 30.0% |
| !! | TCTTTTGAAGAAAAAGGGAT+TGG | - | chr1.3:60868409-60868428 | MS.gene20920:intron | 30.0% |
| AAAAGGCTGTGCAAACATAA+AGG | - | chr1.3:60870210-60870229 | MS.gene20920:intron | 35.0% | |
| AAGATATCCTCTTAGACAGA+AGG | + | chr1.3:60870967-60870986 | None:intergenic | 35.0% | |
| AAGATGGGAAATATCAACAC+AGG | - | chr1.3:60867653-60867672 | MS.gene20920:intron | 35.0% | |
| AAGTACCATAATTTCCAGAG+AGG | - | chr1.3:60868357-60868376 | MS.gene20920:intron | 35.0% | |
| AATGCATTAAAAGCTAGCAG+AGG | + | chr1.3:60870026-60870045 | None:intergenic | 35.0% | |
| ACACCTTAATCTCAAATCAC+AGG | + | chr1.3:60869718-60869737 | None:intergenic | 35.0% | |
| AGATATAAGGTGAGACTTTG+AGG | - | chr1.3:60872440-60872459 | MS.gene20920:CDS | 35.0% | |
| ATCTTGCAAATTGAAACCCA+GGG | - | chr1.3:60869843-60869862 | MS.gene20920:intron | 35.0% | |
| ATGGTCCTCATAGAAAATCT+TGG | + | chr1.3:60868940-60868959 | None:intergenic | 35.0% | |
| CAGGAAAAGAGTTCCAAAAT+AGG | - | chr1.3:60868487-60868506 | MS.gene20920:intron | 35.0% | |
| CAGTCAAGGAAAATTTCCAT+AGG | - | chr1.3:60867542-60867561 | MS.gene20920:intron | 35.0% | |
| CGGATAGAAACAAGATTTGA+AGG | - | chr1.3:60870823-60870842 | MS.gene20920:CDS | 35.0% | |
| CTATAAACAGAAGCTACCAA+TGG | + | chr1.3:60872214-60872233 | None:intergenic | 35.0% | |
| GAAAACACACTGATACTTGT+TGG | - | chr1.3:60869939-60869958 | MS.gene20920:intron | 35.0% | |
| GAAAAGAGTTCCAAAATAGG+GGG | - | chr1.3:60868490-60868509 | MS.gene20920:intron | 35.0% | |
| GAATATATTAGGATGAAGGG+TGG | - | chr1.3:60871146-60871165 | MS.gene20920:CDS | 35.0% | |
| GATATAAGGTGAGACTTTGA+GGG | - | chr1.3:60872441-60872460 | MS.gene20920:CDS | 35.0% | |
| GATGAAGCTATGCCAAATAT+TGG | - | chr1.3:60868096-60868115 | MS.gene20920:intron | 35.0% | |
| GATTTCTTGCATCTAATCTC+TGG | - | chr1.3:60872692-60872711 | MS.gene20920:intron | 35.0% | |
| GCAAAGTGAGAAATCAAATG+CGG | + | chr1.3:60871532-60871551 | None:intergenic | 35.0% | |
| GCAGATCAGATAGAGATAAA+AGG | - | chr1.3:60871848-60871867 | MS.gene20920:CDS | 35.0% | |
| GCTTTAACTCAATAAGGGAT+TGG | - | chr1.3:60872660-60872679 | MS.gene20920:intron | 35.0% | |
| GGAAAAGAGTTCCAAAATAG+GGG | - | chr1.3:60868489-60868508 | MS.gene20920:intron | 35.0% | |
| GGGAAAAAAATCCATTCGTA+TGG | - | chr1.3:60869863-60869882 | MS.gene20920:intron | 35.0% | |
| GTACAAGTCTGTTTCAATCT+GGG | + | chr1.3:60870680-60870699 | None:intergenic | 35.0% | |
| GTTGATATTTCCCATCTTAG+AGG | + | chr1.3:60867651-60867670 | None:intergenic | 35.0% | |
| TAACCTAATACAGCTTAACG+GGG | + | chr1.3:60872375-60872394 | None:intergenic | 35.0% | |
| TAAGGATGTAAGCTCACTTT+AGG | - | chr1.3:60872174-60872193 | MS.gene20920:CDS | 35.0% | |
| TACAAGTGCTTGTAAGTTGT+AGG | - | chr1.3:60871353-60871372 | MS.gene20920:CDS | 35.0% | |
| TCACAATTGTAAGAAGGACA+AGG | - | chr1.3:60868156-60868175 | MS.gene20920:CDS | 35.0% | |
| TCTCAAATCACAGGTTATGA+AGG | + | chr1.3:60869709-60869728 | None:intergenic | 35.0% | |
| TGAAGCTATGCCAAATATTG+GGG | - | chr1.3:60868098-60868117 | MS.gene20920:intron | 35.0% | |
| TGCATCTAATCTCTGGTTAA+GGG | - | chr1.3:60872699-60872718 | MS.gene20920:intron | 35.0% | |
| TTCTTTGTGCAATGCATGAT+TGG | - | chr1.3:60869608-60869627 | MS.gene20920:intron | 35.0% | |
| TTGAAATTCATCTTGCGACT+TGG | + | chr1.3:60868812-60868831 | None:intergenic | 35.0% | |
| TTGCATCTAATCTCTGGTTA+AGG | - | chr1.3:60872698-60872717 | MS.gene20920:intron | 35.0% | |
| TTTGAAGAAAAAGGGATTGG+CGG | - | chr1.3:60868412-60868431 | MS.gene20920:intron | 35.0% | |
| ! | AAACCAATTACATTAGCCTC+AGG | - | chr1.3:60869387-60869406 | MS.gene20920:CDS | 35.0% |
| ! | AAATAGTTCTACACTCTTGC+TGG | + | chr1.3:60868771-60868790 | None:intergenic | 35.0% |
| ! | AAGAACATACAAGATTGGCT+TGG | + | chr1.3:60869464-60869483 | None:intergenic | 35.0% |
| ! | ATCACAAGTTGAAGAATCAG+TGG | - | chr1.3:60872823-60872842 | MS.gene20920:intron | 35.0% |
| ! | CAGTGTGTTTTCATTCATCA+CGG | + | chr1.3:60869931-60869950 | None:intergenic | 35.0% |
| ! | CTATGGAAATTTTCCTTGAC+TGG | + | chr1.3:60867544-60867563 | None:intergenic | 35.0% |
| ! | CTCAAATCATTCTGATGATG+CGG | - | chr1.3:60869571-60869590 | MS.gene20920:CDS | 35.0% |
| ! | CTCAATAAGGGATTGGTATT+TGG | - | chr1.3:60872667-60872686 | MS.gene20920:intron | 35.0% |
| ! | TCCAATTTGCTTCTCTTTAG+CGG | + | chr1.3:60867711-60867730 | None:intergenic | 35.0% |
| ! | TCTGTACTGTTTTCTGTTCT+AGG | + | chr1.3:60868067-60868086 | None:intergenic | 35.0% |
| ! | TCTTTTGAGCATCATTGAGT+TGG | + | chr1.3:60872853-60872872 | None:intergenic | 35.0% |
| !! | CATCATTTGGAAAAGCATCT+CGG | + | chr1.3:60868438-60868457 | None:intergenic | 35.0% |
| !! | CTCAAAAACTTTTGGTGTAG+TGG | + | chr1.3:60868014-60868033 | None:intergenic | 35.0% |
| !! | GAATCAACTGAGTTTTTGAG+GGG | - | chr1.3:60872324-60872343 | MS.gene20920:CDS | 35.0% |
| !! | GTATTGTTTGCTGTTTGTGT+TGG | + | chr1.3:60868709-60868728 | None:intergenic | 35.0% |
| !! | GTTAGCTCTGTATTGTATTG+TGG | - | chr1.3:60872140-60872159 | MS.gene20920:CDS | 35.0% |
| !!! | ACGAATGGATTTTTTTCCCT+GGG | + | chr1.3:60869862-60869881 | None:intergenic | 35.0% |
| !!! | TACGAATGGATTTTTTTCCC+TGG | + | chr1.3:60869863-60869882 | None:intergenic | 35.0% |
| !!! | TGGTCTTTTTTCTGTGTCTT+GGG | + | chr1.3:60868670-60868689 | None:intergenic | 35.0% |
| AACACCAAAGACACACCAAA+AGG | - | chr1.3:60868879-60868898 | MS.gene20920:intron | 40.0% | |
| AAGAAGTGGTCCCCAATATT+TGG | + | chr1.3:60868111-60868130 | None:intergenic | 40.0% | |
| ACCATCTTCTGTTCATGTGT+AGG | - | chr1.3:60870135-60870154 | MS.gene20920:intron | 40.0% | |
| ACCTACACATGAACAGAAGA+TGG | + | chr1.3:60870139-60870158 | None:intergenic | 40.0% | |
| AGAAAGAAGGGAAAGAAGGA+TGG | - | chr1.3:60867953-60867972 | MS.gene20920:intron | 40.0% | |
| AGAAGAGACCAGTAAACTAG+CGG | + | chr1.3:60867807-60867826 | None:intergenic | 40.0% | |
| AGAGGTTAATCTACACCTAC+AGG | - | chr1.3:60871796-60871815 | MS.gene20920:CDS | 40.0% | |
| AGGCTCTCACAATTGTAAGA+AGG | - | chr1.3:60868150-60868169 | MS.gene20920:CDS | 40.0% | |
| AGTTCAACAGCCCTAACAAT+CGG | + | chr1.3:60870538-60870557 | None:intergenic | 40.0% | |
| ATGAATGACTGTCGGAGTAT+GGG | - | chr1.3:60867500-60867519 | MS.gene20920:intron | 40.0% | |
| ATTGTGGCTCAAGTGGTTTA+AGG | - | chr1.3:60872156-60872175 | MS.gene20920:CDS | 40.0% | |
| CAACTAACACTCCATACGAA+TGG | + | chr1.3:60869877-60869896 | None:intergenic | 40.0% | |
| CAGATTCATCATATGAGGAG+AGG | - | chr1.3:60869209-60869228 | MS.gene20920:intron | 40.0% | |
| CATCTTGCAAATTGAAACCC+AGG | - | chr1.3:60869842-60869861 | MS.gene20920:intron | 40.0% | |
| CGTACAAGTCTGTTTCAATC+TGG | + | chr1.3:60870681-60870700 | None:intergenic | 40.0% | |
| CTACGATAGATTCAAGGAAG+AGG | - | chr1.3:60871778-60871797 | MS.gene20920:CDS | 40.0% | |
| CTTCCTGAGGCTAATGTAAT+TGG | + | chr1.3:60869393-60869412 | None:intergenic | 40.0% | |
| GAAAATTACATCCACACAGC+AGG | - | chr1.3:60872871-60872890 | MS.gene20920:intron | 40.0% | |
| GAAAGAAGGGAAAGAAGGAT+GGG | - | chr1.3:60867954-60867973 | MS.gene20920:intron | 40.0% | |
| GACACTGAAGAACCATCATT+TGG | + | chr1.3:60868451-60868470 | None:intergenic | 40.0% | |
| GAGATTCTTCCCTATGCTTT+CGG | + | chr1.3:60871476-60871495 | None:intergenic | 40.0% | |
| GAGGTTACCCTTTCTGTATT+TGG | + | chr1.3:60867632-60867651 | None:intergenic | 40.0% | |
| GCTAAAGAGAAGCAAATTGG+AGG | - | chr1.3:60867710-60867729 | MS.gene20920:intron | 40.0% | |
| GCTCTGTCATCACTATTTAC+TGG | - | chr1.3:60869738-60869757 | MS.gene20920:CDS | 40.0% | |
| GTATTGTATTGTGGCTCAAG+TGG | - | chr1.3:60872149-60872168 | MS.gene20920:CDS | 40.0% | |
| TATCAACACAGGAGAAAGCA+AGG | - | chr1.3:60867664-60867683 | MS.gene20920:intron | 40.0% | |
| TATGAATGACTGTCGGAGTA+TGG | - | chr1.3:60867499-60867518 | MS.gene20920:intron | 40.0% | |
| TCACTTGGGAATAAAATGGG+AGG | - | chr1.3:60868607-60868626 | MS.gene20920:intron | 40.0% | |
| TCATAAAAGTCGCGAAATCG+AGG | + | chr1.3:60867139-60867158 | None:intergenic | 40.0% | |
| TCCAAAACCTTCTGTCTAAG+AGG | - | chr1.3:60870957-60870976 | MS.gene20920:intron | 40.0% | |
| TCCGCTAAAGAGAAGCAAAT+TGG | - | chr1.3:60867707-60867726 | MS.gene20920:intron | 40.0% | |
| TGTCGTGCCAAATACAGAAA+GGG | - | chr1.3:60867622-60867641 | MS.gene20920:intron | 40.0% | |
| TTCTGTTCATGTGTAGGTTC+TGG | - | chr1.3:60870141-60870160 | MS.gene20920:intron | 40.0% | |
| ! | AATATCAGGTCCGAAAGCAT+AGG | - | chr1.3:60871463-60871482 | MS.gene20920:CDS | 40.0% |
| ! | AGAAAGGGTAACCTCTAAGA+TGG | - | chr1.3:60867637-60867656 | MS.gene20920:intron | 40.0% |
| ! | AGACTCAAGATGGATTTGTC+AGG | - | chr1.3:60870412-60870431 | MS.gene20920:intron | 40.0% |
| ! | AGGAGCATATGAATGACTGT+CGG | - | chr1.3:60867492-60867511 | MS.gene20920:intron | 40.0% |
| ! | ATATCAGGTCCGAAAGCATA+GGG | - | chr1.3:60871464-60871483 | MS.gene20920:CDS | 40.0% |
| ! | ATCATTCTGATGATGCGGAT+AGG | - | chr1.3:60869576-60869595 | MS.gene20920:CDS | 40.0% |
| ! | CAACAAAACCGCTAGTTTAC+TGG | - | chr1.3:60867796-60867815 | MS.gene20920:intron | 40.0% |
| ! | CGAGATGCTTTTCCAAATGA+TGG | - | chr1.3:60868436-60868455 | MS.gene20920:intron | 40.0% |
| ! | CTAGTTTACTGGTCTCTTCT+GGG | - | chr1.3:60867807-60867826 | MS.gene20920:intron | 40.0% |
| ! | CTCTAGAAAGAAGGGAAAGA+AGG | - | chr1.3:60867949-60867968 | MS.gene20920:intron | 40.0% |
| ! | GTGCTACTCCTACAATACAT+AGG | + | chr1.3:60872790-60872809 | None:intergenic | 40.0% |
| ! | TAGTTTACTGGTCTCTTCTG+GGG | - | chr1.3:60867808-60867827 | MS.gene20920:intron | 40.0% |
| ! | TCATTCTGATGATGCGGATA+GGG | - | chr1.3:60869577-60869596 | MS.gene20920:CDS | 40.0% |
| ! | TCCTCTTAGACAGAAGGTTT+TGG | + | chr1.3:60870961-60870980 | None:intergenic | 40.0% |
| ! | TGATGATTTGCCTCTGTAGT+AGG | + | chr1.3:60867773-60867792 | None:intergenic | 40.0% |
| ! | TGTTCCCTTGTTGTGAAGTT+TGG | + | chr1.3:60868994-60869013 | None:intergenic | 40.0% |
| ! | TGTTCTTTTGGCACCTGTTT+TGG | - | chr1.3:60871197-60871216 | MS.gene20920:CDS | 40.0% |
| ! | TTCGCGACTTTTATGAACTG+TGG | - | chr1.3:60867143-60867162 | MS.gene20920:CDS | 40.0% |
| !! | AGCAGAAGCTCTAGAAAGAA+GGG | - | chr1.3:60867941-60867960 | MS.gene20920:intron | 40.0% |
| !! | ATTTTCCTTGACTGGCTAGA+CGG | + | chr1.3:60867536-60867555 | None:intergenic | 40.0% |
| !! | CAGTAAACTAGCGGTTTTGT+TGG | + | chr1.3:60867798-60867817 | None:intergenic | 40.0% |
| !! | GAAAGGGTAACCTCTAAGAT+GGG | - | chr1.3:60867638-60867657 | MS.gene20920:intron | 40.0% |
| !! | TAGCAGAAGCTCTAGAAAGA+AGG | - | chr1.3:60867940-60867959 | MS.gene20920:intron | 40.0% |
| !! | TGAACTGTTCGCTTTGGAAT+TGG | - | chr1.3:60870552-60870571 | MS.gene20920:intron | 40.0% |
| !! | TTAATCTCAGCTGTTTCTGC+TGG | + | chr1.3:60871757-60871776 | None:intergenic | 40.0% |
| !! | TTTCTCTTCTGGTTCAAGTG+TGG | + | chr1.3:60868199-60868218 | None:intergenic | 40.0% |
| !! | TTTGCCTTTTGGTGTGTCTT+TGG | + | chr1.3:60868886-60868905 | None:intergenic | 40.0% |
| !! | TTTGGTGTGTCTTTGGTGTT+GGG | + | chr1.3:60868879-60868898 | None:intergenic | 40.0% |
| !! | TTTTGGTGTGTCTTTGGTGT+TGG | + | chr1.3:60868880-60868899 | None:intergenic | 40.0% |
| !!! | GGTCTTTTTTCTGTGTCTTG+GGG | + | chr1.3:60868669-60868688 | None:intergenic | 40.0% |
| !!! | GTGGTCTTTTTTCTGTGTCT+TGG | + | chr1.3:60868671-60868690 | None:intergenic | 40.0% |
| AAAGAGACAGAAGAGCAGGA+TGG | - | chr1.3:60869181-60869200 | MS.gene20920:CDS | 45.0% | |
| AAGAAGCGGACCTAAGAAAG+GGG | - | chr1.3:60867592-60867611 | MS.gene20920:intron | 45.0% | |
| AAGGATGAGCCTCATGGAAA+AGG | - | chr1.3:60867836-60867855 | MS.gene20920:intron | 45.0% | |
| AATACAGCTTAACGGGGACT+CGG | + | chr1.3:60872369-60872388 | None:intergenic | 45.0% | |
| ACAAATACTTGCCTGCTGTG+TGG | + | chr1.3:60872885-60872904 | None:intergenic | 45.0% | |
| AGACATACATTTCCAGCTGC+AGG | - | chr1.3:60870645-60870664 | MS.gene20920:intron | 45.0% | |
| AGATCAGCGTGTAGAACATG+AGG | - | chr1.3:60868729-60868748 | MS.gene20920:intron | 45.0% | |
| AGCCTGAATCCTGAGTCTTA+GGG | + | chr1.3:60868135-60868154 | None:intergenic | 45.0% | |
| AGGATGAGCCTCATGGAAAA+GGG | - | chr1.3:60867837-60867856 | MS.gene20920:intron | 45.0% | |
| AGGTGTTAAAGTTACCTGCC+AGG | - | chr1.3:60869769-60869788 | MS.gene20920:CDS | 45.0% | |
| AGTCCCCGTTAAGCTGTATT+AGG | - | chr1.3:60872369-60872388 | MS.gene20920:CDS | 45.0% | |
| CAAGAAGCGGACCTAAGAAA+GGG | - | chr1.3:60867591-60867610 | MS.gene20920:intron | 45.0% | |
| CGATTCTGCCATAACTCCTA+TGG | + | chr1.3:60867561-60867580 | None:intergenic | 45.0% | |
| CTGTCGTGCCAAATACAGAA+AGG | - | chr1.3:60867621-60867640 | MS.gene20920:intron | 45.0% | |
| CTTTCTGTATTTGGCACGAC+AGG | + | chr1.3:60867623-60867642 | None:intergenic | 45.0% | |
| GAACCTAGAAACTGTGAACC+TGG | + | chr1.3:60869790-60869809 | None:intergenic | 45.0% | |
| GCAAATTGGAGGTCCAAAAG+CGG | - | chr1.3:60867721-60867740 | MS.gene20920:intron | 45.0% | |
| GCAGCTTCAGTGTCTTCAAA+AGG | - | chr1.3:60870255-60870274 | MS.gene20920:intron | 45.0% | |
| GCTAGAAGAAAGCGATTCGA+TGG | - | chr1.3:60870374-60870393 | MS.gene20920:intron | 45.0% | |
| GCTTCTGAACAGACTCAAGA+TGG | - | chr1.3:60870402-60870421 | MS.gene20920:intron | 45.0% | |
| GGAGCCAAACTTCACAACAA+GGG | - | chr1.3:60868987-60869006 | MS.gene20920:intron | 45.0% | |
| GGATGTAAGCTCACTTTAGG+TGG | - | chr1.3:60872177-60872196 | MS.gene20920:CDS | 45.0% | |
| GTCCTGACCATACTCGTAAA+AGG | - | chr1.3:60868272-60868291 | MS.gene20920:intron | 45.0% | |
| TATGAGGAGAGGAACATCCA+AGG | - | chr1.3:60869220-60869239 | MS.gene20920:intron | 45.0% | |
| TCAAGAAGCGGACCTAAGAA+AGG | - | chr1.3:60867590-60867609 | MS.gene20920:intron | 45.0% | |
| TTACAACCGCATCTACTGGA+GGG | + | chr1.3:60869907-60869926 | None:intergenic | 45.0% | |
| ! | AAGCACTGTAGAAGATCTCG+AGG | - | chr1.3:60871826-60871845 | MS.gene20920:CDS | 45.0% |
| ! | AGTTTACTGGTCTCTTCTGG+GGG | - | chr1.3:60867809-60867828 | MS.gene20920:intron | 45.0% |
| ! | AGTTTCTAGGTTCTTGCACC+TGG | - | chr1.3:60869797-60869816 | MS.gene20920:CDS | 45.0% |
| ! | CTCTGCCTCTCTGGAAATTA+TGG | + | chr1.3:60868365-60868384 | None:intergenic | 45.0% |
| ! | GAGCTTATGTCCCCCTATTT+TGG | + | chr1.3:60868503-60868522 | None:intergenic | 45.0% |
| ! | GCTAGTTTACTGGTCTCTTC+TGG | - | chr1.3:60867806-60867825 | MS.gene20920:intron | 45.0% |
| ! | TGTTTGCACAGCCTTTTGAC+AGG | + | chr1.3:60870207-60870226 | None:intergenic | 45.0% |
| !! | AGAAGCTACCAATGGACTGT+GGG | + | chr1.3:60872206-60872225 | None:intergenic | 45.0% |
| !! | CATACAAGATTGGCTTGGCA+TGG | + | chr1.3:60869459-60869478 | None:intergenic | 45.0% |
| !! | GTGGTTTAGTTTGGTCGATG+TGG | - | chr1.3:60867162-60867181 | MS.gene20920:CDS | 45.0% |
| !!! | TGACTGGCCTTTTACGAGTA+TGG | + | chr1.3:60868282-60868301 | None:intergenic | 45.0% |
| AAAGGCCAGTCACTCGTTCT+AGG | - | chr1.3:60868290-60868309 | MS.gene20920:intron | 50.0% | |
| AACATCCAAGGACGTCGTCA+AGG | - | chr1.3:60869232-60869251 | MS.gene20920:intron | 50.0% | |
| AATTGGAGGTCCAAAAGCGG+TGG | - | chr1.3:60867724-60867743 | MS.gene20920:intron | 50.0% | |
| ACAGGAGAAAGCAAGGCTGT+AGG | - | chr1.3:60867671-60867690 | MS.gene20920:intron | 50.0% | |
| ACAGGTCCATCCCCTTTCTT+AGG | + | chr1.3:60867605-60867624 | None:intergenic | 50.0% | |
| ACCTGTAGCACGAGATGAGA+CGG | + | chr1.3:60872243-60872262 | None:intergenic | 50.0% | |
| ACTGATCCACCACTGTATGC+AGG | - | chr1.3:60868574-60868593 | MS.gene20920:intron | 50.0% | |
| ATACAGCTTAACGGGGACTC+GGG | + | chr1.3:60872368-60872387 | None:intergenic | 50.0% | |
| ATGATGCGGATAGGGATGGT+TGG | - | chr1.3:60869585-60869604 | MS.gene20920:CDS | 50.0% | |
| CACTTCTTCCCCTAAGACTC+AGG | - | chr1.3:60868123-60868142 | MS.gene20920:CDS | 50.0% | |
| CATCTCGTGCTACAGGTTGT+GGG | - | chr1.3:60872246-60872265 | MS.gene20920:CDS | 50.0% | |
| CGGAGCCAAACTTCACAACA+AGG | - | chr1.3:60868986-60869005 | MS.gene20920:intron | 50.0% | |
| CTAGAAACTGTGAACCTGGC+AGG | + | chr1.3:60869786-60869805 | None:intergenic | 50.0% | |
| CTGAGTCTTAGGGGAAGAAG+TGG | + | chr1.3:60868125-60868144 | None:intergenic | 50.0% | |
| CTGATCCACCACTGTATGCA+GGG | - | chr1.3:60868575-60868594 | MS.gene20920:intron | 50.0% | |
| CTGCCAGGTTCACAGTTTCT+AGG | - | chr1.3:60869784-60869803 | MS.gene20920:CDS | 50.0% | |
| CTGGGAAGACGCTTTCTTTC+TGG | + | chr1.3:60868317-60868336 | None:intergenic | 50.0% | |
| CTTACAACCGCATCTACTGG+AGG | + | chr1.3:60869908-60869927 | None:intergenic | 50.0% | |
| GAGAAAGCAAGGCTGTAGGA+GGG | - | chr1.3:60867675-60867694 | MS.gene20920:intron | 50.0% | |
| GAGCAAAGCATACTGCTGAG+AGG | - | chr1.3:60870163-60870182 | MS.gene20920:intron | 50.0% | |
| GAGCCTGAATCCTGAGTCTT+AGG | + | chr1.3:60868136-60868155 | None:intergenic | 50.0% | |
| GCCTGAATCCTGAGTCTTAG+GGG | + | chr1.3:60868134-60868153 | None:intergenic | 50.0% | |
| GGAGAAAGAGACAGAAGAGC+AGG | - | chr1.3:60869177-60869196 | MS.gene20920:CDS | 50.0% | |
| GGCTAAATCGCCTACTACAG+AGG | - | chr1.3:60867760-60867779 | MS.gene20920:intron | 50.0% | |
| GGCTGTTGAACTGTTCGCTT+TGG | - | chr1.3:60870546-60870565 | MS.gene20920:intron | 50.0% | |
| TCATCTCGTGCTACAGGTTG+TGG | - | chr1.3:60872245-60872264 | MS.gene20920:CDS | 50.0% | |
| TCCCAGAAGCAACAGGGAAA+GGG | - | chr1.3:60868331-60868350 | MS.gene20920:intron | 50.0% | |
| TCCCCTAAGACTCAGGATTC+AGG | - | chr1.3:60868130-60868149 | MS.gene20920:CDS | 50.0% | |
| TCGAAAGCCAGCTCAAGAAG+CGG | - | chr1.3:60867578-60867597 | MS.gene20920:intron | 50.0% | |
| TGATCCACCACTGTATGCAG+GGG | - | chr1.3:60868576-60868595 | MS.gene20920:intron | 50.0% | |
| TGGTTCAAGTGTGGCTTGAG+CGG | + | chr1.3:60868190-60868209 | None:intergenic | 50.0% | |
| TTCATCCGTCTAGCCAGTCA+AGG | - | chr1.3:60867528-60867547 | MS.gene20920:intron | 50.0% | |
| TTCCCAGAAGCAACAGGGAA+AGG | - | chr1.3:60868330-60868349 | MS.gene20920:intron | 50.0% | |
| TTGATGCTTCTCTGCCTCTC+TGG | + | chr1.3:60868374-60868393 | None:intergenic | 50.0% | |
| ! | ACCCTTTCCCTGTTGCTTCT+GGG | + | chr1.3:60868335-60868354 | None:intergenic | 50.0% |
| ! | ATGGAAAAGGGTGTGGAGCT+GGG | - | chr1.3:60867849-60867868 | MS.gene20920:intron | 50.0% |
| ! | CAGGGGCCTCATTTTCACTT+GGG | - | chr1.3:60868593-60868612 | MS.gene20920:intron | 50.0% |
| ! | CTTGGTCTTTCGGTTGATGC+TGG | + | chr1.3:60868922-60868941 | None:intergenic | 50.0% |
| ! | GGCCTTTTACGAGTATGGTC+AGG | + | chr1.3:60868277-60868296 | None:intergenic | 50.0% |
| ! | GTTTACTGGTCTCTTCTGGG+GGG | - | chr1.3:60867810-60867829 | MS.gene20920:intron | 50.0% |
| ! | TACCCTTTCCCTGTTGCTTC+TGG | + | chr1.3:60868336-60868355 | None:intergenic | 50.0% |
| ! | TCTGATGATGCGGATAGGGA+TGG | - | chr1.3:60869581-60869600 | MS.gene20920:CDS | 50.0% |
| !! | AGGATGGGAGTGCTGAAGAA+AGG | - | chr1.3:60867969-60867988 | MS.gene20920:intron | 50.0% |
| !! | CAGAAGCTACCAATGGACTG+TGG | + | chr1.3:60872207-60872226 | None:intergenic | 50.0% |
| !! | CAGTGGTGGATCAGTCTTTG+AGG | + | chr1.3:60868569-60868588 | None:intergenic | 50.0% |
| !! | GAGTGCTGAAGAAAGGGTAG+AGG | - | chr1.3:60867976-60867995 | MS.gene20920:intron | 50.0% |
| !! | GGATGGGAGTGCTGAAGAAA+GGG | - | chr1.3:60867970-60867989 | MS.gene20920:intron | 50.0% |
| !! | TGTGTCTTTGGTGTTGGGCT+AGG | + | chr1.3:60868874-60868893 | None:intergenic | 50.0% |
| AATGAGGCCCCTGCATACAG+TGG | + | chr1.3:60868586-60868605 | None:intergenic | 55.0% | |
| AGCGGACCTAAGAAAGGGGA+TGG | - | chr1.3:60867596-60867615 | MS.gene20920:intron | 55.0% | |
| AGCGTCTTCCCAGAAGCAAC+AGG | - | chr1.3:60868324-60868343 | MS.gene20920:intron | 55.0% | |
| CAAAAGCGGTGGAGGGTTCT+TGG | - | chr1.3:60867735-60867754 | MS.gene20920:intron | 55.0% | |
| CAGTGCTTCTGCAGTCCTGT+AGG | + | chr1.3:60871814-60871833 | None:intergenic | 55.0% | |
| CCAAACCTTGACGACGTCCT+TGG | + | chr1.3:60869240-60869259 | None:intergenic | 55.0% | |
| CCAAGGACGTCGTCAAGGTT+TGG | - | chr1.3:60869237-60869256 | MS.gene20920:intron | 55.0% | |
| CGGCTTACAACCGCATCTAC+TGG | + | chr1.3:60869911-60869930 | None:intergenic | 55.0% | |
| CTGGTCCTAGAACGAGTGAC+TGG | + | chr1.3:60868298-60868317 | None:intergenic | 55.0% | |
| CTTAGGTCCGCTTCTTGAGC+TGG | + | chr1.3:60867588-60867607 | None:intergenic | 55.0% | |
| GAGCCTCATGGAAAAGGGTG+TGG | - | chr1.3:60867842-60867861 | MS.gene20920:intron | 55.0% | |
| GCGTCTTCCCAGAAGCAACA+GGG | - | chr1.3:60868325-60868344 | MS.gene20920:intron | 55.0% | |
| GGAGAAAGCAAGGCTGTAGG+AGG | - | chr1.3:60867674-60867693 | MS.gene20920:intron | 55.0% | |
| GGGAAGAAGGATGAGCCTCA+TGG | - | chr1.3:60867830-60867849 | MS.gene20920:intron | 55.0% | |
| GGGAATGAACATCCTGCAGC+TGG | + | chr1.3:60870660-60870679 | None:intergenic | 55.0% | |
| GGGCTAGGAGAGCTCAAAGT+AGG | + | chr1.3:60868859-60868878 | None:intergenic | 55.0% | |
| GGTGGATACCCACAGTCCAT+TGG | - | chr1.3:60872195-60872214 | MS.gene20920:CDS | 55.0% | |
| GTAGCTCCCTCCAGTAGATG+CGG | - | chr1.3:60869898-60869917 | MS.gene20920:intron | 55.0% | |
| TACAGCTTAACGGGGACTCG+GGG | + | chr1.3:60872367-60872386 | None:intergenic | 55.0% | |
| ! | CAAGAACCCTCCACCGCTTT+TGG | + | chr1.3:60867737-60867756 | None:intergenic | 55.0% |
| ! | CATGGAAAAGGGTGTGGAGC+TGG | - | chr1.3:60867848-60867867 | MS.gene20920:intron | 55.0% |
| ! | GCAGGGGCCTCATTTTCACT+TGG | - | chr1.3:60868592-60868611 | MS.gene20920:intron | 55.0% |
| ! | GCTCCACACCCTTTTCCATG+AGG | + | chr1.3:60867848-60867867 | None:intergenic | 55.0% |
| ! | TGGAAAAGGGTGTGGAGCTG+GGG | - | chr1.3:60867850-60867869 | MS.gene20920:intron | 55.0% |
| AGCGGTGGAGGGTTCTTGGA+TGG | - | chr1.3:60867739-60867758 | MS.gene20920:intron | 60.0% | |
| GCCGTCTCATCTCGTGCTAC+AGG | - | chr1.3:60872239-60872258 | MS.gene20920:CDS | 60.0% | |
| GGAGGTCCAAAAGCGGTGGA+GGG | - | chr1.3:60867728-60867747 | MS.gene20920:intron | 60.0% | |
| TGGAGGTCCAAAAGCGGTGG+AGG | - | chr1.3:60867727-60867746 | MS.gene20920:intron | 60.0% | |
| ! | GGTCTCTTCTGGGGGGAAGA+AGG | - | chr1.3:60867817-60867836 | MS.gene20920:intron | 60.0% |
| ! | GTGAGACTTTGAGGGCCAGC+CGG | - | chr1.3:60872449-60872468 | MS.gene20920:CDS | 60.0% |
| GAGGCCCCTGCATACAGTGG+TGG | + | chr1.3:60868583-60868602 | None:intergenic | 65.0% | |
| GGGCTGGAGGGAGCAAGAGT+GGG | - | chr1.3:60872475-60872494 | MS.gene20920:CDS | 65.0% | |
| TTGCTCCCTCCAGCCCACTC+CGG | + | chr1.3:60872471-60872490 | None:intergenic | 65.0% | |
| ! | ACTTTGAGGGCCAGCCGGAG+TGG | - | chr1.3:60872454-60872473 | MS.gene20920:CDS | 65.0% |
| ! | CTTTGAGGGCCAGCCGGAGT+GGG | - | chr1.3:60872455-60872474 | MS.gene20920:CDS | 65.0% |
| ! | TGGGCTGGAGGGAGCAAGAG+TGG | - | chr1.3:60872474-60872493 | MS.gene20920:CDS | 65.0% |
| TCCCTCCAGCCCACTCCGGC+TGG | + | chr1.3:60872467-60872486 | None:intergenic | 75.0% | |
| !! | GCCAGCCGGAGTGGGCTGGA+GGG | - | chr1.3:60872463-60872482 | MS.gene20920:CDS | 75.0% |
| ! | GAGGGCCAGCCGGAGTGGGC+TGG | - | chr1.3:60872459-60872478 | MS.gene20920:CDS | 80.0% |
| !!! | GGCCAGCCGGAGTGGGCTGG+AGG | - | chr1.3:60872462-60872481 | MS.gene20920:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60867092 | 60872907 | 60867092 | ID=MS.gene20920 |
| chr1.3 | mRNA | 60867092 | 60872907 | 60867092 | ID=MS.gene20920.t1;Parent=MS.gene20920 |
| chr1.3 | exon | 60872875 | 60872907 | 60872875 | ID=MS.gene20920.t1.exon1;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60872875 | 60872907 | 60872875 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60870973 | 60872505 | 60870973 | ID=MS.gene20920.t1.exon2;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60870973 | 60872505 | 60870973 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60870746 | 60870869 | 60870746 | ID=MS.gene20920.t1.exon3;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60870746 | 60870869 | 60870746 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60869723 | 60869842 | 60869723 | ID=MS.gene20920.t1.exon4;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60869723 | 60869842 | 60869723 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60869566 | 60869626 | 60869566 | ID=MS.gene20920.t1.exon5;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60869566 | 60869626 | 60869566 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60869304 | 60869453 | 60869304 | ID=MS.gene20920.t1.exon6;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60869304 | 60869453 | 60869304 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60869155 | 60869213 | 60869155 | ID=MS.gene20920.t1.exon7;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60869155 | 60869213 | 60869155 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60868112 | 60868246 | 60868112 | ID=MS.gene20920.t1.exon8;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60868112 | 60868246 | 60868112 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| chr1.3 | exon | 60867092 | 60867198 | 60867092 | ID=MS.gene20920.t1.exon9;Parent=MS.gene20920.t1 |
| chr1.3 | CDS | 60867092 | 60867198 | 60867092 | ID=cds.MS.gene20920.t1;Parent=MS.gene20920.t1 |
| Gene Sequence |
| Protein sequence |
