AlfalfaGEDB | MS.gene21143

M. sativa cultivar XinJiangDaYe / MS.gene21143

KEGG: -
GO: GO:0003674 GO:0004857 GO:0030234 GO:0098772
PFAM: PF04043.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21143.t1	AFK45126.1	97.4	196	5	0	1	196	1	196	3.90E-98	367.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21143.t1	P17407	47.2	180	95	0	12	191	13	192	4.3e-45	182.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21143.t1	G7KG88	97.4	196	5	0	1	196	22	217	2.8e-98	367.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049222	MS.gene21143	-0.829308	5.53E-55	-1.69E-46
MS.gene049232	MS.gene21143	-0.837992	3.75E-57	-1.69E-46
MS.gene049320	MS.gene21143	-0.824013	1.02E-53	-1.69E-46
MS.gene04986	MS.gene21143	0.803138	4.02E-49	-1.69E-46
MS.gene05010	MS.gene21143	-0.814573	1.44E-51	-1.69E-46
MS.gene050216	MS.gene21143	-0.822981	1.77E-53	-1.69E-46
MS.gene050323	MS.gene21143	-0.802264	6.09E-49	-1.69E-46
MS.gene050504	MS.gene21143	-0.823198	1.58E-53	-1.69E-46
MS.gene050518	MS.gene21143	-0.812987	3.21E-51	-1.69E-46
MS.gene050577	MS.gene21143	-0.806424	8.28E-50	-1.69E-46
MS.gene050612	MS.gene21143	-0.827363	1.63E-54	-1.69E-46
MS.gene050772	MS.gene21143	-0.819752	9.85E-53	-1.69E-46
MS.gene050883	MS.gene21143	0.801026	1.09E-48	-1.69E-46
MS.gene051364	MS.gene21143	0.824573	7.50E-54	-1.69E-46
MS.gene051366	MS.gene21143	0.82499	5.98E-54	-1.69E-46
MS.gene051367	MS.gene21143	0.8398	1.28E-57	-1.69E-46
MS.gene052482	MS.gene21143	-0.814926	1.20E-51	-1.69E-46
MS.gene052486	MS.gene21143	-0.830169	3.42E-55	-1.69E-46
MS.gene053213	MS.gene21143	-0.804183	2.44E-49	-1.69E-46
MS.gene053286	MS.gene21143	-0.801693	7.98E-49	-1.69E-46
MS.gene053420	MS.gene21143	0.807759	4.32E-50	-1.69E-46
MS.gene053574	MS.gene21143	-0.806139	9.51E-50	-1.69E-46
MS.gene054642	MS.gene21143	-0.802839	4.64E-49	-1.69E-46
MS.gene054954	MS.gene21143	-0.802965	4.37E-49	-1.69E-46
MS.gene055154	MS.gene21143	0.820293	7.41E-53	-1.69E-46
MS.gene055202	MS.gene21143	0.803308	3.71E-49	-1.69E-46
MS.gene055362	MS.gene21143	-0.817908	2.58E-52	-1.69E-46
MS.gene055502	MS.gene21143	-0.817163	3.80E-52	-1.69E-46
MS.gene055577	MS.gene21143	-0.812014	5.25E-51	-1.69E-46
MS.gene055750	MS.gene21143	-0.802299	5.99E-49	-1.69E-46
MS.gene05589	MS.gene21143	-0.800881	1.17E-48	-1.69E-46
MS.gene056504	MS.gene21143	-0.851738	7.30E-61	-1.69E-46
MS.gene056549	MS.gene21143	-0.811926	5.48E-51	-1.69E-46
MS.gene056657	MS.gene21143	-0.819661	1.03E-52	-1.69E-46
MS.gene058109	MS.gene21143	0.822171	2.73E-53	-1.69E-46
MS.gene058111	MS.gene21143	0.860675	1.75E-63	-1.69E-46
MS.gene058171	MS.gene21143	0.837683	4.50E-57	-1.69E-46
MS.gene058173	MS.gene21143	0.830251	3.26E-55	-1.69E-46
MS.gene058175	MS.gene21143	0.837828	4.13E-57	-1.69E-46
MS.gene058419	MS.gene21143	-0.822486	2.31E-53	-1.69E-46
MS.gene059022	MS.gene21143	-0.808952	2.40E-50	-1.69E-46
MS.gene059677	MS.gene21143	-0.802004	6.89E-49	-1.69E-46
MS.gene059865	MS.gene21143	-0.844066	9.52E-59	-1.69E-46
MS.gene060482	MS.gene21143	-0.807918	4.00E-50	-1.69E-46
MS.gene060595	MS.gene21143	0.823407	1.41E-53	-1.69E-46
MS.gene060703	MS.gene21143	-0.814593	1.42E-51	-1.69E-46
MS.gene060762	MS.gene21143	-0.815623	8.41E-52	-1.69E-46
MS.gene060778	MS.gene21143	-0.803811	2.92E-49	-1.69E-46
MS.gene06077	MS.gene21143	-0.824468	7.94E-54	-1.69E-46
MS.gene060823	MS.gene21143	0.817442	3.29E-52	-1.69E-46
MS.gene060982	MS.gene21143	-0.838616	2.59E-57	-1.69E-46
MS.gene061134	MS.gene21143	-0.807323	5.35E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene21143	MS.gene56241	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21143.t1	MTR_5g012000	97.449	196	5	0	1	196	22	217	1.74e-142	395
MS.gene21143.t1	MTR_4g101760	63.402	194	60	2	9	191	10	203	9.12e-85	249
MS.gene21143.t1	MTR_3g008840	53.571	168	77	1	23	190	21	187	8.04e-65	198
MS.gene21143.t1	MTR_3g008820	51.190	168	81	1	23	190	20	186	3.72e-62	191
MS.gene21143.t1	MTR_4g035905	43.030	165	91	1	27	191	36	197	6.51e-45	147
MS.gene21143.t1	MTR_4g035870	38.191	199	111	2	1	190	1	196	6.50e-42	140
MS.gene21143.t1	MTR_4g035880	42.073	164	92	1	27	190	36	196	2.55e-41	138
MS.gene21143.t1	MTR_4g025550	38.308	201	106	6	9	195	10	206	8.50e-39	132
MS.gene21143.t1	MTR_4g025610	37.245	196	115	4	7	195	12	206	7.60e-38	130
MS.gene21143.t1	MTR_4g025590	38.636	176	96	4	27	193	3	175	1.37e-36	126
MS.gene21143.t1	MTR_4g025620	35.567	194	113	4	7	191	12	202	1.23e-35	124
MS.gene21143.t1	MTR_8g104765	38.596	171	96	3	25	187	42	211	1.70e-33	119
MS.gene21143.t1	MTR_4g120825	38.596	171	96	3	25	187	33	202	1.71e-33	119
MS.gene21143.t1	MTR_4g120830	38.596	171	96	3	25	187	33	202	2.69e-33	118
MS.gene21143.t1	MTR_7g108790	35.802	162	99	2	28	189	34	190	3.26e-30	110
MS.gene21143.t1	MTR_3g008760	34.161	161	102	2	27	185	66	224	5.41e-28	105
MS.gene21143.t1	MTR_2g043560	35.912	181	95	6	16	189	23	189	1.26e-25	98.6
MS.gene21143.t1	MTR_4g124855	31.606	193	115	5	8	189	13	199	2.45e-24	95.5
MS.gene21143.t1	MTR_4g035855	31.056	161	110	1	27	187	43	202	1.24e-22	90.9
MS.gene21143.t1	MTR_1g088540	30.405	148	98	2	42	189	1	143	3.99e-19	80.1
MS.gene21143.t1	MTR_3g091380	30.864	162	107	2	24	182	74	233	1.20e-17	80.5
MS.gene21143.t1	MTR_1g008140	29.762	168	106	3	24	182	78	242	9.21e-17	78.2
MS.gene21143.t1	MTR_8g023310	25.478	157	113	2	28	182	68	222	8.30e-15	72.4
MS.gene21143.t1	MTR_8g023150	29.341	167	108	5	20	183	69	228	3.83e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21143.t1	AT1G62770	50.244	205	92	6	1	196	1	204	5.06e-61	189
MS.gene21143.t1	AT4G12390	56.805	169	69	2	27	192	39	206	1.79e-60	187
MS.gene21143.t1	AT4G25260	46.409	181	96	1	11	190	21	201	2.27e-55	174
MS.gene21143.t1	AT5G62350	47.273	165	86	1	27	190	38	202	8.20e-55	173
MS.gene21143.t1	AT3G47380	42.784	194	101	2	7	190	9	202	3.56e-52	166
MS.gene21143.t1	AT5G62360	41.818	165	92	2	26	190	42	202	2.57e-45	149
MS.gene21143.t1	AT1G62760	43.182	176	90	2	20	191	140	309	7.70e-42	143
MS.gene21143.t1	AT1G14890	41.566	166	90	2	26	189	57	217	8.00e-39	133
MS.gene21143.t1	AT2G01610	40.113	177	93	3	26	189	43	219	2.79e-37	129
MS.gene21143.t1	AT5G20740	40.361	166	90	3	26	186	32	193	1.61e-35	124
MS.gene21143.t1	AT5G20740	40.361	166	90	3	26	186	66	227	4.95e-35	124
MS.gene21143.t1	AT4G25250	34.969	163	104	2	27	188	37	198	2.48e-34	120
MS.gene21143.t1	AT4G00080	36.683	199	111	6	1	185	1	198	2.75e-34	121
MS.gene21143.t1	AT1G70720	34.254	181	110	3	12	187	18	194	2.86e-29	107
MS.gene21143.t1	AT1G70720	34.254	181	110	3	12	187	30	206	3.38e-29	108
MS.gene21143.t1	AT5G51520	33.929	168	101	2	27	186	37	202	8.61e-28	104
MS.gene21143.t1	AT1G23205	35.870	184	105	4	11	184	17	197	2.71e-25	97.8
MS.gene21143.t1	AT3G62820	32.796	186	115	5	8	188	11	191	1.76e-22	90.1
MS.gene21143.t1	AT3G14310	27.933	179	124	3	14	189	43	219	8.97e-21	89.7
MS.gene21143.t1	AT2G47670	30.675	163	109	2	25	187	46	204	1.03e-19	83.2
MS.gene21143.t1	AT1G53830	28.235	170	119	2	21	189	55	222	8.07e-18	81.3
MS.gene21143.t1	AT3G49220	32.184	174	92	7	24	190	128	282	2.24e-15	73.9
MS.gene21143.t1	AT3G49220	32.184	174	92	7	24	190	128	282	3.39e-15	73.6
MS.gene21143.t1	AT3G49220	32.184	174	92	7	24	190	83	237	4.03e-15	73.2
MS.gene21143.t1	AT5G53370	27.500	160	108	4	24	182	107	259	4.39e-13	67.4
MS.gene21143.t1	AT5G53370	27.500	160	108	4	24	182	71	223	5.08e-13	67.0
MS.gene21143.t1	AT3G14300	26.136	176	123	2	22	191	265	439	2.25e-12	65.5
MS.gene21143.t1	AT5G62340	25.616	203	120	7	9	190	14	206	2.77e-11	60.5

Find 53 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATGATAACACTTGTCTTGA+TGG	0.271370	5.1:+5417893	MS.gene21143:CDS
ACTTGTCTTGATGGCTTTGC+TGG	0.284433	5.1:+5417902	MS.gene21143:CDS
TAGAGCAGGGGTTTATTTGC+TGG	0.342763	5.1:+5417472	MS.gene21143:CDS
AGAAAACATGGGTGACAGTT+TGG	0.352972	5.1:+5417760	MS.gene21143:CDS
ATTGACAACCCTGTCCTTGA+TGG	0.385514	5.1:-5417954	None:intergenic
ACAGTCTTAGCCAATCGGTT+AGG	0.388918	5.1:+5417783	MS.gene21143:CDS
TACCAGCAACACACTCGCTT+TGG	0.400248	5.1:+5417988	MS.gene21143:CDS
ATGGGGTATGCGAGCGTGAT+TGG	0.403801	5.1:+5417599	MS.gene21143:CDS
AACCAAAGCGAGTGTGTTGC+TGG	0.408904	5.1:-5417990	None:intergenic
TTCCATGAATGGAATTGTTA+AGG	0.412818	5.1:+5417928	MS.gene21143:CDS
TCGTTAGTTGTCGCTCGCTT+TGG	0.415738	5.1:-5417622	None:intergenic
AGCCTTAACAATTCCATTCA+TGG	0.416556	5.1:-5417930	None:intergenic
GTAAACATGGCGGCTAGAGC+AGG	0.417002	5.1:+5417458	None:intergenic
ACATGAACAACGTGCAGACT+TGG	0.438369	5.1:+5417852	MS.gene21143:CDS
AGCCAATCGGTTAGGGAGTT+AGG	0.439103	5.1:+5417791	MS.gene21143:CDS
TTTGCTGGTCCTTCCATGAA+TGG	0.446590	5.1:+5417917	MS.gene21143:CDS
CGATGCACTCGATCGTGTCC+TGG	0.450154	5.1:-5417669	None:intergenic
CAGTCTTAGCCAATCGGTTA+GGG	0.452763	5.1:+5417784	MS.gene21143:CDS
AGACATTGAACGCATAAAAC+AGG	0.460054	5.1:-5417575	None:intergenic
GGCAGTATTGGTCATGCTGT+TGG	0.460878	5.1:+5417812	MS.gene21143:CDS
TTTATGCGTTCAATGTCTCA+TGG	0.462904	5.1:+5417580	MS.gene21143:CDS
GTTAGGGAGTTAGGCAGTAT+TGG	0.470731	5.1:+5417800	MS.gene21143:CDS
GAACTCTGATGGGGTTATAG+AGG	0.476311	5.1:-5417522	None:intergenic
TTAAGGCTGCCATCAAGGAC+AGG	0.476862	5.1:+5417945	MS.gene21143:CDS
TGTACGGCTCTGTACTCCCT+TGG	0.486585	5.1:-5417728	None:intergenic
CTCTATCAGTGAGCATATCC+AGG	0.495431	5.1:+5417651	MS.gene21143:CDS
TTATGCGTTCAATGTCTCAT+GGG	0.496994	5.1:+5417581	MS.gene21143:CDS
TTTGGACAGTCTTAGCCAAT+CGG	0.504656	5.1:+5417778	MS.gene21143:CDS
GGCAAGAGGCATCAAGCCAA+GGG	0.526611	5.1:+5417712	MS.gene21143:CDS
TTCTGCAGTTCGATGGCTTG+AGG	0.534233	5.1:-5418023	None:intergenic
AATTGTTAAGGCTGCCATCA+AGG	0.538854	5.1:+5417940	MS.gene21143:CDS
TGCCTAACTCCCTAACCGAT+TGG	0.544285	5.1:-5417793	None:intergenic
AGGCAAGAGGCATCAAGCCA+AGG	0.545433	5.1:+5417711	MS.gene21143:CDS
TAAACATGGCGGCTAGAGCA+GGG	0.549343	5.1:+5417459	None:intergenic
GAGGACTTGATGAACTCTGA+TGG	0.549989	5.1:-5417533	None:intergenic
AGGACTTGATGAACTCTGAT+GGG	0.550827	5.1:-5417532	None:intergenic
AAGGAGTTTCTGCAGTTCGA+TGG	0.560457	5.1:-5418030	None:intergenic
CTGCAGTCACAAGGCTCATG+AGG	0.571475	5.1:-5417496	None:intergenic
ACAAGACTGCATAGAAAACA+TGG	0.577763	5.1:+5417748	MS.gene21143:CDS
CATGAACAACGTGCAGACTT+GGG	0.585314	5.1:+5417853	MS.gene21143:CDS
TATGCGTTCAATGTCTCATG+GGG	0.593117	5.1:+5417582	MS.gene21143:CDS
TTAACAATTCCATTCATGGA+AGG	0.596367	5.1:-5417926	None:intergenic
TAAGGCTGCCATCAAGGACA+GGG	0.619720	5.1:+5417946	MS.gene21143:CDS
TATTGGTCATGCTGTTGGAG+AGG	0.620267	5.1:+5417817	MS.gene21143:CDS
TAGAGGATTCTGCAGTCACA+AGG	0.636790	5.1:-5417505	None:intergenic
CAGAAGATATCAAAGGCAAG+AGG	0.641738	5.1:+5417698	MS.gene21143:CDS
GTTTGTACAGAAGATATCAA+AGG	0.649432	5.1:+5417691	MS.gene21143:CDS
AAACATGGCGGCTAGAGCAG+GGG	0.656730	5.1:+5417460	None:intergenic
ATAGCGAGTAGCTCTACATG+AGG	0.683240	5.1:-5417552	None:intergenic
GGATATGCTCACTGATAGAG+CGG	0.692375	5.1:-5417648	None:intergenic
GGACTTGATGAACTCTGATG+GGG	0.708124	5.1:-5417531	None:intergenic
CAAGACTGCATAGAAAACAT+GGG	0.713583	5.1:+5417749	MS.gene21143:CDS
CTGTTGGAGAGGACTTCGTG+TGG	0.729717	5.1:+5417828	MS.gene21143:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	GTTTGTACAGAAGATATCAA+AGG	+	chr5.1:5417691-5417710	MS.gene21143:CDS	30.0%
	TTAACAATTCCATTCATGGA+AGG	-	chr5.1:5417929-5417948	None:intergenic	30.0%
	TTCCATGAATGGAATTGTTA+AGG	+	chr5.1:5417928-5417947	MS.gene21143:CDS	30.0%
	ACAAGACTGCATAGAAAACA+TGG	+	chr5.1:5417748-5417767	MS.gene21143:CDS	35.0%
	AGACATTGAACGCATAAAAC+AGG	-	chr5.1:5417578-5417597	None:intergenic	35.0%
	AGCCTTAACAATTCCATTCA+TGG	-	chr5.1:5417933-5417952	None:intergenic	35.0%
	CAAGACTGCATAGAAAACAT+GGG	+	chr5.1:5417749-5417768	MS.gene21143:CDS	35.0%
	GATGATAACACTTGTCTTGA+TGG	+	chr5.1:5417893-5417912	MS.gene21143:CDS	35.0%
	TTATGCGTTCAATGTCTCAT+GGG	+	chr5.1:5417581-5417600	MS.gene21143:CDS	35.0%
	TTTATGCGTTCAATGTCTCA+TGG	+	chr5.1:5417580-5417599	MS.gene21143:CDS	35.0%
!!	GTTTTCTATGCAGTCTTGTA+CGG	-	chr5.1:5417747-5417766	None:intergenic	35.0%
	AATTGTTAAGGCTGCCATCA+AGG	+	chr5.1:5417940-5417959	MS.gene21143:CDS	40.0%
	AGAAAACATGGGTGACAGTT+TGG	+	chr5.1:5417760-5417779	MS.gene21143:CDS	40.0%
	AGGACTTGATGAACTCTGAT+GGG	-	chr5.1:5417535-5417554	None:intergenic	40.0%
	CAGAAGATATCAAAGGCAAG+AGG	+	chr5.1:5417698-5417717	MS.gene21143:CDS	40.0%
	TATGCGTTCAATGTCTCATG+GGG	+	chr5.1:5417582-5417601	MS.gene21143:CDS	40.0%
	TTTGGACAGTCTTAGCCAAT+CGG	+	chr5.1:5417778-5417797	MS.gene21143:CDS	40.0%
	AAGGAGTTTCTGCAGTTCGA+TGG	-	chr5.1:5418033-5418052	None:intergenic	45.0%
	ACAGTCTTAGCCAATCGGTT+AGG	+	chr5.1:5417783-5417802	MS.gene21143:CDS	45.0%
	ACATGAACAACGTGCAGACT+TGG	+	chr5.1:5417852-5417871	MS.gene21143:CDS	45.0%
	ATTGACAACCCTGTCCTTGA+TGG	-	chr5.1:5417957-5417976	None:intergenic	45.0%
	CAGTCTTAGCCAATCGGTTA+GGG	+	chr5.1:5417784-5417803	MS.gene21143:CDS	45.0%
	CATGAACAACGTGCAGACTT+GGG	+	chr5.1:5417853-5417872	MS.gene21143:CDS	45.0%
	CTCTATCAGTGAGCATATCC+AGG	+	chr5.1:5417651-5417670	MS.gene21143:CDS	45.0%
	GAACTCTGATGGGGTTATAG+AGG	-	chr5.1:5417525-5417544	None:intergenic	45.0%
	GAGGACTTGATGAACTCTGA+TGG	-	chr5.1:5417536-5417555	None:intergenic	45.0%
	GGACTTGATGAACTCTGATG+GGG	-	chr5.1:5417534-5417553	None:intergenic	45.0%
	GGATATGCTCACTGATAGAG+CGG	-	chr5.1:5417651-5417670	None:intergenic	45.0%
	GTTAGGGAGTTAGGCAGTAT+TGG	+	chr5.1:5417800-5417819	MS.gene21143:CDS	45.0%
	TAGAGCAGGGGTTTATTTGC+TGG	+	chr5.1:5417472-5417491	MS.gene21143:CDS	45.0%
	TAGAGGATTCTGCAGTCACA+AGG	-	chr5.1:5417508-5417527	None:intergenic	45.0%
	TATTGGTCATGCTGTTGGAG+AGG	+	chr5.1:5417817-5417836	MS.gene21143:CDS	45.0%
	TTTGCTGGTCCTTCCATGAA+TGG	+	chr5.1:5417917-5417936	MS.gene21143:CDS	45.0%
!	ACTTGTCTTGATGGCTTTGC+TGG	+	chr5.1:5417902-5417921	MS.gene21143:CDS	45.0%
!	ATAGCGAGTAGCTCTACATG+AGG	-	chr5.1:5417555-5417574	None:intergenic	45.0%
	AACCAAAGCGAGTGTGTTGC+TGG	-	chr5.1:5417993-5418012	None:intergenic	50.0%
	AGCCAATCGGTTAGGGAGTT+AGG	+	chr5.1:5417791-5417810	MS.gene21143:CDS	50.0%
	TAAGGCTGCCATCAAGGACA+GGG	+	chr5.1:5417946-5417965	MS.gene21143:CDS	50.0%
	TACCAGCAACACACTCGCTT+TGG	+	chr5.1:5417988-5418007	MS.gene21143:CDS	50.0%
	TCGTTAGTTGTCGCTCGCTT+TGG	-	chr5.1:5417625-5417644	None:intergenic	50.0%
	TGCCTAACTCCCTAACCGAT+TGG	-	chr5.1:5417796-5417815	None:intergenic	50.0%
	TTAAGGCTGCCATCAAGGAC+AGG	+	chr5.1:5417945-5417964	MS.gene21143:CDS	50.0%
	TTCTGCAGTTCGATGGCTTG+AGG	-	chr5.1:5418026-5418045	None:intergenic	50.0%
!!	GGCAGTATTGGTCATGCTGT+TGG	+	chr5.1:5417812-5417831	MS.gene21143:CDS	50.0%
	ATGGGGTATGCGAGCGTGAT+TGG	+	chr5.1:5417599-5417618	MS.gene21143:CDS	55.0%
	CTGCAGTCACAAGGCTCATG+AGG	-	chr5.1:5417499-5417518	None:intergenic	55.0%
	CTGTTGGAGAGGACTTCGTG+TGG	+	chr5.1:5417828-5417847	MS.gene21143:CDS	55.0%
	TGTACGGCTCTGTACTCCCT+TGG	-	chr5.1:5417731-5417750	None:intergenic	55.0%
!!	AGGCAAGAGGCATCAAGCCA+AGG	+	chr5.1:5417711-5417730	MS.gene21143:CDS	55.0%
!!	GGCAAGAGGCATCAAGCCAA+GGG	+	chr5.1:5417712-5417731	MS.gene21143:CDS	55.0%
	CGATGCACTCGATCGTGTCC+TGG	-	chr5.1:5417672-5417691	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	5417464	5418054	5417464	ID=MS.gene21143
chr5.1	mRNA	5417464	5418054	5417464	ID=MS.gene21143.t1;Parent=MS.gene21143
chr5.1	exon	5417464	5418054	5417464	ID=MS.gene21143.t1.exon1;Parent=MS.gene21143.t1
chr5.1	CDS	5417464	5418054	5417464	ID=cds.MS.gene21143.t1;Parent=MS.gene21143.t1

Gene Sequence

>MS.gene21143

ATGGCGGCTAGAGCAGGGGTTTATTTGCTGGTCCTCATGAGCCTTGTGACTGCAGAATCCTCTATAACCCCATCAGAGTTCATCAAGTCCTCATGTAGAGCTACTCGCTATCCTGTTTTATGCGTTCAATGTCTCATGGGGTATGCGAGCGTGATTGGCCAAAGCGAGCGACAACTAACGATAACCGCTCTATCAGTGAGCATATCCAGGACACGATCGAGTGCATCGTTTGTACAGAAGATATCAAAGGCAAGAGGCATCAAGCCAAGGGAGTACAGAGCCGTACAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGACTTCGTGTGGCACATGAACAACGTGCAGACTTGGGTCAGTGCTGCACTTACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTTCCATGAATGGAATTGTTAAGGCTGCCATCAAGGACAGGGTTGTCAATGTTGCTCAAGTTACCAGCAACACACTCGCTTTGGTTAATCACTTCGCCTCAAGCCATCGAACTGCAGAAACTCCTTAA

Protein sequence

>MS.gene21143.t1

MAARAGVYLLVLMSLVTAESSITPSEFIKSSCRATRYPVLCVQCLMGYASVIGQSERQLTITALSVSISRTRSSASFVQKISKARGIKPREYRAVQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMNNVQTWVSAALTDDNTCLDGFAGPSMNGIVKAAIKDRVVNVAQVTSNTLALVNHFASSHRTAETP