AlfalfaGEDB | MS.gene63845

M. sativa cultivar XinJiangDaYe / MS.gene63845

KEGG: K02731
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004298 GO:0005575 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0019773 GO:0019941 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0070003 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901575
PFAM: PF00227.29 PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63845.t1	GAU34208.1	94	249	15	0	1	249	1	249	1.50E-123	452.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63845.t1	Q9SXU1	94.0	249	15	0	1	249	1	249	8.3e-126	451.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63845.t1	A0A2Z6MPD6	94.0	249	15	0	1	249	1	249	1.1e-123	452.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene015193	MS.gene63845	PPI
MS.gene28454	MS.gene63845	PPI
MS.gene63845	MS.gene21801	PPI
MS.gene89677	MS.gene63845	PPI
MS.gene09974	MS.gene63845	PPI
MS.gene63845	MS.gene071304	PPI
MS.gene63845	MS.gene024701	PPI
MS.gene63845	MS.gene41888	PPI
MS.gene63845	MS.gene58136	PPI
MS.gene030685	MS.gene63845	PPI
MS.gene63845	MS.gene44226	PPI
MS.gene63845	MS.gene015192	PPI
MS.gene028080	MS.gene63845	PPI
MS.gene63845	MS.gene57214	PPI
MS.gene74962	MS.gene63845	PPI
MS.gene63845	MS.gene43832	PPI
MS.gene63845	MS.gene043801	PPI
MS.gene63845	MS.gene012131	PPI
MS.gene63845	MS.gene42312	PPI
MS.gene63845	MS.gene071036	PPI
MS.gene63845	MS.gene24253	PPI
MS.gene63845	MS.gene015190	PPI
MS.gene068078	MS.gene63845	PPI
MS.gene63845	MS.gene47175	PPI
MS.gene63845	MS.gene74417	PPI
MS.gene63845	MS.gene22289	PPI
MS.gene63845	MS.gene046093	PPI
MS.gene028078	MS.gene63845	PPI
MS.gene074000	MS.gene63845	PPI
MS.gene068080	MS.gene63845	PPI
MS.gene69461	MS.gene63845	PPI
MS.gene064694	MS.gene63845	PPI
MS.gene63845	MS.gene26537	PPI
MS.gene63845	MS.gene066737	PPI
MS.gene24255	MS.gene63845	PPI
MS.gene24037	MS.gene63845	PPI
MS.gene63845	MS.gene57158	PPI
MS.gene066738	MS.gene63845	PPI
MS.gene63845	MS.gene071345	PPI
MS.gene63845	MS.gene052056	PPI
MS.gene061878	MS.gene63845	PPI
MS.gene63845	MS.gene55530	PPI
MS.gene63845	MS.gene99509	PPI
MS.gene63845	MS.gene41890	PPI
MS.gene27247	MS.gene63845	PPI
MS.gene017616	MS.gene63845	PPI
MS.gene014485	MS.gene63845	PPI
MS.gene029314	MS.gene63845	PPI
MS.gene24253	MS.gene63845	PPI
MS.gene63845	MS.gene72831	PPI
MS.gene29473	MS.gene63845	PPI
MS.gene63845	MS.gene008760	PPI
MS.gene09870	MS.gene63845	PPI
MS.gene63845	MS.gene074061	PPI
MS.gene63845	MS.gene070084	PPI
MS.gene63845	MS.gene70283	PPI
MS.gene63845	MS.gene70282	PPI
MS.gene58134	MS.gene63845	PPI
MS.gene63845	MS.gene64658	PPI
MS.gene025808	MS.gene63845	PPI
MS.gene63845	MS.gene068998	PPI
MS.gene29922	MS.gene63845	PPI
MS.gene63845	MS.gene26985	PPI
MS.gene63845	MS.gene45550	PPI
MS.gene40486	MS.gene63845	PPI
MS.gene63845	MS.gene24252	PPI
MS.gene63845	MS.gene039040	PPI
MS.gene48062	MS.gene63845	PPI
MS.gene63845	MS.gene21169	PPI
MS.gene84459	MS.gene63845	PPI
MS.gene64609	MS.gene63845	PPI
MS.gene28183	MS.gene63845	PPI
MS.gene84986	MS.gene63845	PPI
MS.gene006641	MS.gene63845	PPI
MS.gene63845	MS.gene76217	PPI
MS.gene030686	MS.gene63845	PPI
MS.gene045566	MS.gene63845	PPI
MS.gene90698	MS.gene63845	PPI
MS.gene29256	MS.gene63845	PPI
MS.gene20239	MS.gene63845	PPI
MS.gene97690	MS.gene63845	PPI
MS.gene21679	MS.gene63845	PPI
MS.gene32570	MS.gene63845	PPI
MS.gene63845	MS.gene27289	PPI
MS.gene63845	MS.gene21951	PPI
MS.gene63845	MS.gene024828	PPI
MS.gene63845	MS.gene77139	PPI
MS.gene63845	MS.gene92186	PPI
MS.gene070615	MS.gene63845	PPI
MS.gene63845	MS.gene39618	PPI
MS.gene055714	MS.gene63845	PPI
MS.gene63845	MS.gene065045	PPI
MS.gene31094	MS.gene63845	PPI
MS.gene63845	MS.gene058061	PPI
MS.gene63845	MS.gene78385	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63845.t1	MTR_8g075320	93.173	249	17	0	1	249	1	249	3.99e-161	446
MS.gene63845.t1	MTR_2g016050	91.968	249	20	0	1	249	1	249	4.76e-158	439
MS.gene63845.t1	MTR_0167s0060	38.889	234	138	3	2	232	4	235	4.36e-54	174
MS.gene63845.t1	MTR_7g070070	42.500	200	112	3	3	200	4	202	3.58e-52	170
MS.gene63845.t1	MTR_5g016590	42.500	200	112	3	3	200	4	202	6.28e-52	169
MS.gene63845.t1	MTR_1g112250	43.564	202	108	3	2	199	6	205	2.80e-50	164
MS.gene63845.t1	MTR_8g464460	38.397	237	133	6	1	225	1	236	1.55e-43	147
MS.gene63845.t1	MTR_2g060830	38.494	239	130	8	1	225	1	236	3.52e-42	144
MS.gene63845.t1	MTR_1g022410	36.019	211	130	3	2	211	4	210	1.78e-36	130
MS.gene63845.t1	MTR_6g024135	34.104	173	112	1	4	176	8	178	4.63e-28	107
MS.gene63845.t1	MTR_4g012740	28.800	250	133	7	2	211	235	479	7.15e-19	85.9
MS.gene63845.t1	MTR_4g057090	28.409	176	117	4	25	196	110	280	1.23e-12	67.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63845.t1	AT5G66140	88.000	250	29	1	1	249	1	250	2.06e-153	427
MS.gene63845.t1	AT3G51260	86.900	229	29	1	1	228	1	229	1.16e-148	415
MS.gene63845.t1	AT3G51260	88.208	212	25	0	1	212	1	212	1.75e-141	396
MS.gene63845.t1	AT3G22110	43.000	200	111	3	3	200	4	202	5.30e-53	172
MS.gene63845.t1	AT1G16470	38.462	234	139	3	2	232	4	235	5.23e-52	169
MS.gene63845.t1	AT1G16470	38.462	234	139	3	2	232	4	235	5.23e-52	169
MS.gene63845.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.16e-51	168
MS.gene63845.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.16e-51	168
MS.gene63845.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.16e-51	168
MS.gene63845.t1	AT1G53850	40.678	236	130	5	2	231	6	237	1.39e-51	168
MS.gene63845.t1	AT1G53850	40.678	236	130	5	2	231	6	237	1.39e-51	168
MS.gene63845.t1	AT3G14290	44.059	202	107	3	2	199	6	205	5.25e-51	166
MS.gene63845.t1	AT5G35590	38.819	237	132	6	1	225	1	236	8.97e-44	148
MS.gene63845.t1	AT2G05840	37.975	237	134	6	1	225	1	236	7.26e-42	143
MS.gene63845.t1	AT2G05840	37.615	218	126	4	1	209	1	217	1.35e-40	139
MS.gene63845.t1	AT5G42790	34.310	239	143	5	2	232	4	236	1.22e-38	136
MS.gene63845.t1	AT1G47250	33.891	239	144	5	2	232	4	236	1.44e-38	135
MS.gene63845.t1	AT2G05840	36.598	194	118	3	4	193	9	201	1.46e-36	128
MS.gene63845.t1	AT4G15165	35.000	200	85	4	3	200	4	160	3.46e-33	120
MS.gene63845.t1	AT2G27020	33.514	185	120	2	4	187	8	190	1.84e-28	108
MS.gene63845.t1	AT2G27020	33.514	185	120	2	4	187	110	292	1.89e-27	108

Find 67 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAACTCGGGCCCGGTTTATA+AGG	0.275165	5.1:+75377806	None:intergenic
AGTAGTGGTGTGCGGCCATT+TGG	0.275198	5.1:-75377691	MS.gene63845:CDS
GGTGAGGAAGATTGTTAGTT+TGG	0.281871	5.1:-75377878	MS.gene63845:CDS
TGGGCAAGAAACTGTCAAAT+TGG	0.335063	5.1:-75377509	MS.gene63845:CDS
GACTGAACTTGAGTTTCTTC+CGG	0.350838	5.1:+75377567	None:intergenic
CATGTTGCTCTTGCTTGTGC+TGG	0.361778	5.1:-75377850	MS.gene63845:CDS
GGAGAATGGTCTGCGTCAAC+TGG	0.398793	5.1:-75376948	MS.gene63845:CDS
TACATAACCCGTTACATTGC+AGG	0.399795	5.1:-75377736	MS.gene63845:CDS
TAACCTCGAGTCTTGCAGTT+TGG	0.402098	5.1:+75378229	None:intergenic
AACCTAGAATCATGTGTCCT+TGG	0.409440	5.1:+75376847	None:intergenic
CTTCAAGAGCATACTCTACT+TGG	0.421409	5.1:+75378330	None:intergenic
CTGAAGACCTGCAATGTAAC+GGG	0.426498	5.1:+75377729	None:intergenic
ATGCTCGTGTCCTTATAAAC+CGG	0.435736	5.1:-75377816	MS.gene63845:CDS
GTAGTGGTGTGCGGCCATTT+GGG	0.436998	5.1:-75377690	MS.gene63845:CDS
ATTAGGTTGTTGAGAGTGGA+GGG	0.456795	5.1:-75377000	MS.gene63845:intron
CGAGTCTTGCAGTTTGGCAG+CGG	0.458214	5.1:+75378235	None:intergenic
TGTAATTAGGTTGTTGAGAG+TGG	0.458926	5.1:-75377004	MS.gene63845:intron
TCTGGCATTCAACTCGGGCC+CGG	0.465148	5.1:+75377797	None:intergenic
GCTTGGAAAGCTAACGCAAC+CGG	0.470438	5.1:-75377586	MS.gene63845:CDS
ACCTAGAATCATGTGTCCTT+GGG	0.476679	5.1:+75376848	None:intergenic
ACTTGGAAGAGATGACCATC+AGG	0.480914	5.1:+75378347	None:intergenic
GGGCTTTCGACGTTGATCGT+TGG	0.483437	5.1:-75377670	MS.gene63845:CDS
TTGTACCAAACCGACCCTTC+CGG	0.487764	5.1:-75377619	MS.gene63845:CDS
CAACGGTAAGTCTATGACTC+TGG	0.487875	5.1:+75377779	None:intergenic
AACGCCGCTGTTGGTGTTCG+AGG	0.495321	5.1:-75378293	MS.gene63845:CDS
CGTTGAGGATCCTTGTACTG+TGG	0.495580	5.1:-75377761	MS.gene63845:CDS
CGCTGAGATTGAAGCAGAGA+AGG	0.501268	5.1:-75376900	MS.gene63845:CDS
ATGTACCGGAAGGGTCGGTT+TGG	0.502119	5.1:+75377614	None:intergenic
CGCAAAGGTAACGCCGCTGT+TGG	0.503142	5.1:-75378302	MS.gene63845:CDS
AAGAACTATAAAGACACCTC+TGG	0.510915	5.1:-75377529	MS.gene63845:CDS
AAAGACGGTGACCCGGTGTA+AGG	0.518981	5.1:+75377640	None:intergenic
AGCAGAGAAGGCAGCTGCTG+AGG	0.524478	5.1:-75376888	MS.gene63845:CDS
ATCAACGTCGAAAGCCCAAA+TGG	0.525799	5.1:+75377676	None:intergenic
GTTTATAAGGACACGAGCAT+CGG	0.528829	5.1:+75377819	None:intergenic
ATGACTCTGGCATTCAACTC+GGG	0.530398	5.1:+75377792	None:intergenic
TATGACTCTGGCATTCAACT+CGG	0.533537	5.1:+75377791	None:intergenic
GGCTATCAGCTCGTTGCTTG+AGG	0.537039	5.1:-75377488	MS.gene63845:intron
GCTGAAGACCTGCAATGTAA+CGG	0.539298	5.1:+75377728	None:intergenic
AATTAGGTTGTTGAGAGTGG+AGG	0.542436	5.1:-75377001	MS.gene63845:intron
TGCTCGTGTCCTTATAAACC+GGG	0.561137	5.1:-75377815	MS.gene63845:CDS
TTGACGCAGACCATTCTCCT+TGG	0.562828	5.1:+75376952	None:intergenic
AGCGGCGTTACCTTTGCGAA+CGG	0.567249	5.1:+75378307	None:intergenic
AGAACTATAAAGACACCTCT+GGG	0.578182	5.1:-75377528	MS.gene63845:CDS
TTTCCAAGCCGAAAATGTAC+CGG	0.590468	5.1:+75377600	None:intergenic
TGCAAAGAAAGCTCCTCCCA+AGG	0.590791	5.1:-75376864	MS.gene63845:CDS
AGTTCTTCTCTAGAAACTCA+CGG	0.594945	5.1:+75377545	None:intergenic
TGCTTCAATCTCAGCGACAA+TGG	0.601944	5.1:+75376907	None:intergenic
TAGAATCATGTGTCCTTGGG+AGG	0.604588	5.1:+75376851	None:intergenic
AGAAGAATATCAAAATGTCT+CGG	0.605446	5.1:-75378397	None:intergenic
GTTATGTATTCCACAGTACA+AGG	0.608705	5.1:+75377751	None:intergenic
GCTGTGATGACCAAGGAGAA+TGG	0.610505	5.1:-75376962	MS.gene63845:CDS
GAATGGTCTGCGTCAACTGG+AGG	0.615416	5.1:-75376945	MS.gene63845:CDS
GCTCTTGAAGCCGTTCGCAA+AGG	0.618632	5.1:-75378317	MS.gene63845:CDS
CAAGCCGAAAATGTACCGGA+AGG	0.619903	5.1:+75377604	None:intergenic
CGAAAATGTACCGGAAGGGT+CGG	0.623923	5.1:+75377609	None:intergenic
TTGGTACAAAGACGGTGACC+CGG	0.625299	5.1:+75377633	None:intergenic
CAAAAGTACACACAGAGTAG+TGG	0.631460	5.1:-75377706	MS.gene63845:CDS
AAGCCGAAAATGTACCGGAA+GGG	0.641577	5.1:+75377605	None:intergenic
CTGCCAAACTGCAAGACTCG+AGG	0.647953	5.1:-75378232	MS.gene63845:intron
AGACAACGTCGTTCTCTGCG+TGG	0.656938	5.1:-75378267	MS.gene63845:CDS
GGGTCGGTTTGGTACAAAGA+CGG	0.662196	5.1:+75377625	None:intergenic
TTTGACAGTTTCTTGCCCAG+AGG	0.662254	5.1:+75377513	None:intergenic
CACAGTACAAGGATCCTCAA+CGG	0.666452	5.1:+75377762	None:intergenic
ACACACAGAGTAGTGGTGTG+CGG	0.698448	5.1:-75377699	MS.gene63845:CDS
GAGTCATAGACTTACCGTTG+AGG	0.701059	5.1:-75377776	MS.gene63845:CDS
TGTACCTCGAACACCAACAG+CGG	0.713203	5.1:+75378289	None:intergenic
TGAAGTTGCTGTGATGACCA+AGG	0.749955	5.1:-75376969	MS.gene63845:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATATATATAATATATGGATT+TGG	-	chr5.1:75377301-75377320	MS.gene63845:intron	10.0%
!!	TAATAAAAGCAAAAAAAAAA+AGG	+	chr5.1:75377154-75377173	None:intergenic	10.0%
!!	TATATATAATATATGGATTT+GGG	-	chr5.1:75377302-75377321	MS.gene63845:intron	10.0%
!!	TATATATATTATAAGCAGTT+TGG	+	chr5.1:75377290-75377309	None:intergenic	15.0%
!!	AAGCAATATAAATGAATGAT+AGG	+	chr5.1:75377827-75377846	None:intergenic	20.0%
!!	AATAGTAAAAGACATATACA+TGG	+	chr5.1:75377924-75377943	None:intergenic	20.0%
!!	TAATTATTTGACTGCATATT+AGG	-	chr5.1:75378052-75378071	MS.gene63845:intron	20.0%
!	ACTTTGCAAAATAAATGCAT+GGG	-	chr5.1:75378011-75378030	MS.gene63845:intron	25.0%
!	TATATTATAAGCAGTTTGGT+TGG	+	chr5.1:75377286-75377305	None:intergenic	25.0%
!	TTTCTTGCTAGATGATATAT+AGG	-	chr5.1:75377877-75377896	MS.gene63845:CDS	25.0%
!!	TATAGGGTAGTATTTTCATT+TGG	-	chr5.1:75378201-75378220	MS.gene63845:intron	25.0%
!!!	TTTGCTTTTGTTTTGAAGAT+TGG	-	chr5.1:75377340-75377359	MS.gene63845:intron	25.0%
	CACTTTGCAAAATAAATGCA+TGG	-	chr5.1:75378010-75378029	MS.gene63845:intron	30.0%
	CTTTGCAAAATAAATGCATG+GGG	-	chr5.1:75378012-75378031	MS.gene63845:intron	30.0%
	GCAGTCAAATAATTATGTCA+AGG	+	chr5.1:75378047-75378066	None:intergenic	30.0%
	TCAACAACCTAATTACATGT+AGG	+	chr5.1:75378232-75378251	None:intergenic	30.0%
!	GGTTTTTCCTACATGTAATT+AGG	-	chr5.1:75378222-75378241	MS.gene63845:intron	30.0%
!!	TTATAGTTCTAGTTGAGCAA+CGG	+	chr5.1:75377210-75377229	None:intergenic	30.0%
!!!	TTTTGTTTTGAAGATTGGTG+AGG	-	chr5.1:75377345-75377364	MS.gene63845:intron	30.0%
	AACTCGATGATCAAGAATTG+AGG	-	chr5.1:75377104-75377123	MS.gene63845:intron	35.0%
	AAGAACTATAAAGACACCTC+TGG	-	chr5.1:75377710-75377729	MS.gene63845:CDS	35.0%
	AATTCCATGCTAGGTTAATC+TGG	-	chr5.1:75377067-75377086	MS.gene63845:intron	35.0%
	AGAACTATAAAGACACCTCT+GGG	-	chr5.1:75377711-75377730	MS.gene63845:CDS	35.0%
	AGACATATACATGGAAAGAG+CGG	+	chr5.1:75377915-75377934	None:intergenic	35.0%
	CATGCAATAAATTCCATGCT+AGG	-	chr5.1:75377058-75377077	MS.gene63845:intron	35.0%
	CTAGCATGGAATTTATTGCA+TGG	+	chr5.1:75377060-75377079	None:intergenic	35.0%
	CTAGGTTAATCTGGATTCTA+GGG	-	chr5.1:75377076-75377095	MS.gene63845:intron	35.0%
	GTTATGTATTCCACAGTACA+AGG	+	chr5.1:75377491-75377510	None:intergenic	35.0%
!	AGTTCTTCTCTAGAAACTCA+CGG	+	chr5.1:75377697-75377716	None:intergenic	35.0%
!	TGTAATTAGGTTGTTGAGAG+TGG	-	chr5.1:75378235-75378254	MS.gene63845:CDS	35.0%
	ATGCTCGTGTCCTTATAAAC+CGG	-	chr5.1:75377423-75377442	MS.gene63845:intron	40.0%
	GAATCCAGATTAACCTAGCA+TGG	+	chr5.1:75377074-75377093	None:intergenic	40.0%
	GACTGAACTTGAGTTTCTTC+CGG	+	chr5.1:75377675-75377694	None:intergenic	40.0%
	GCAAAATAAATGCATGGGGA+CGG	-	chr5.1:75378016-75378035	MS.gene63845:intron	40.0%
	GCTAGGTTAATCTGGATTCT+AGG	-	chr5.1:75377075-75377094	MS.gene63845:intron	40.0%
	GGTGAGGAAGATTGTTAGTT+TGG	-	chr5.1:75377361-75377380	MS.gene63845:intron	40.0%
	GTTTATAAGGACACGAGCAT+CGG	+	chr5.1:75377423-75377442	None:intergenic	40.0%
	TACATAACCCGTTACATTGC+AGG	-	chr5.1:75377503-75377522	MS.gene63845:CDS	40.0%
	TATGACTCTGGCATTCAACT+CGG	+	chr5.1:75377451-75377470	None:intergenic	40.0%
	TGGGCAAGAAACTGTCAAAT+TGG	-	chr5.1:75377730-75377749	MS.gene63845:CDS	40.0%
	TTAAACGCTGAGTGTGACTT+TGG	-	chr5.1:75377944-75377963	MS.gene63845:intron	40.0%
	TTTCCAAGCCGAAAATGTAC+CGG	+	chr5.1:75377642-75377661	None:intergenic	40.0%
!	AATTAGGTTGTTGAGAGTGG+AGG	-	chr5.1:75378238-75378257	MS.gene63845:CDS	40.0%
!	ATCACAGTTTTCTCTCCTGA+TGG	-	chr5.1:75376877-75376896	MS.gene63845:CDS	40.0%
!	ATTAGGTTGTTGAGAGTGGA+GGG	-	chr5.1:75378239-75378258	MS.gene63845:CDS	40.0%
!	CAAAAGTACACACAGAGTAG+TGG	-	chr5.1:75377533-75377552	MS.gene63845:CDS	40.0%
!	CTTCAAGAGCATACTCTACT+TGG	+	chr5.1:75376912-75376931	None:intergenic	40.0%
!!!	GTTGGTTTTGATCCTTACAC+CGG	-	chr5.1:75377587-75377606	MS.gene63845:CDS	40.0%
!!!	TTGGTTTTGATCCTTACACC+GGG	-	chr5.1:75377588-75377607	MS.gene63845:CDS	40.0%
	AAGCCGAAAATGTACCGGAA+GGG	+	chr5.1:75377637-75377656	None:intergenic	45.0%
	ACTTGGAAGAGATGACCATC+AGG	+	chr5.1:75376895-75376914	None:intergenic	45.0%
	ATCAACGTCGAAAGCCCAAA+TGG	+	chr5.1:75377566-75377585	None:intergenic	45.0%
	ATGACTCTGGCATTCAACTC+GGG	+	chr5.1:75377450-75377469	None:intergenic	45.0%
	CAACGGTAAGTCTATGACTC+TGG	+	chr5.1:75377463-75377482	None:intergenic	45.0%
	CACAGTACAAGGATCCTCAA+CGG	+	chr5.1:75377480-75377499	None:intergenic	45.0%
	CTGAAGACCTGCAATGTAAC+GGG	+	chr5.1:75377513-75377532	None:intergenic	45.0%
	GAGTCATAGACTTACCGTTG+AGG	-	chr5.1:75377463-75377482	MS.gene63845:intron	45.0%
	GCTGAAGACCTGCAATGTAA+CGG	+	chr5.1:75377514-75377533	None:intergenic	45.0%
	GCTGAGTGTGACTTTGGATT+TGG	-	chr5.1:75377950-75377969	MS.gene63845:intron	45.0%
	TAACCTCGAGTCTTGCAGTT+TGG	+	chr5.1:75377013-75377032	None:intergenic	45.0%
	TGAAGTTGCTGTGATGACCA+AGG	-	chr5.1:75378270-75378289	MS.gene63845:CDS	45.0%
	TGCTCGTGTCCTTATAAACC+GGG	-	chr5.1:75377424-75377443	MS.gene63845:intron	45.0%
	TGCTTCAATCTCAGCGACAA+TGG	+	chr5.1:75378335-75378354	None:intergenic	45.0%
	TTTGACAGTTTCTTGCCCAG+AGG	+	chr5.1:75377729-75377748	None:intergenic	45.0%
!!	ATTTATATAATACTATTATA+GGG	-	chr5.1:75378185-75378204	MS.gene63845:intron	5.0%
!!	CTTATAATATATATAATATA+TGG	-	chr5.1:75377295-75377314	MS.gene63845:intron	5.0%
!!	TATTTATATAATACTATTAT+AGG	-	chr5.1:75378184-75378203	MS.gene63845:intron	5.0%
	ACACACAGAGTAGTGGTGTG+CGG	-	chr5.1:75377540-75377559	MS.gene63845:CDS	50.0%
	CAAGCCGAAAATGTACCGGA+AGG	+	chr5.1:75377638-75377657	None:intergenic	50.0%
	CATGTTGCTCTTGCTTGTGC+TGG	-	chr5.1:75377389-75377408	MS.gene63845:intron	50.0%
	CGAAAATGTACCGGAAGGGT+CGG	+	chr5.1:75377633-75377652	None:intergenic	50.0%
	CGCTGAGATTGAAGCAGAGA+AGG	-	chr5.1:75378339-75378358	MS.gene63845:CDS	50.0%
	CGTTGAGGATCCTTGTACTG+TGG	-	chr5.1:75377478-75377497	MS.gene63845:intron	50.0%
	GCTGTGATGACCAAGGAGAA+TGG	-	chr5.1:75378277-75378296	MS.gene63845:CDS	50.0%
	GCTTGGAAAGCTAACGCAAC+CGG	-	chr5.1:75377653-75377672	MS.gene63845:CDS	50.0%
	TGCAAAGAAAGCTCCTCCCA+AGG	-	chr5.1:75378375-75378394	MS.gene63845:CDS	50.0%
	TGTACCTCGAACACCAACAG+CGG	+	chr5.1:75376953-75376972	None:intergenic	50.0%
	TTGACGCAGACCATTCTCCT+TGG	+	chr5.1:75378290-75378309	None:intergenic	50.0%
	TTGGTACAAAGACGGTGACC+CGG	+	chr5.1:75377609-75377628	None:intergenic	50.0%
	TTGTACCAAACCGACCCTTC+CGG	-	chr5.1:75377620-75377639	MS.gene63845:CDS	50.0%
!	CGACCCTTCCGGTACATTTT+CGG	-	chr5.1:75377631-75377650	MS.gene63845:CDS	50.0%
!	CTTCCGGTACATTTTCGGCT+TGG	-	chr5.1:75377636-75377655	MS.gene63845:CDS	50.0%
!	GCAACGGAGCATTATACGAC+AGG	+	chr5.1:75377194-75377213	None:intergenic	50.0%
!!	GGGTCGGTTTGGTACAAAGA+CGG	+	chr5.1:75377617-75377636	None:intergenic	50.0%
	AAAGACGGTGACCCGGTGTA+AGG	+	chr5.1:75377602-75377621	None:intergenic	55.0%
	AGACAACGTCGTTCTCTGCG+TGG	-	chr5.1:75376972-75376991	MS.gene63845:CDS	55.0%
	AGCGGCGTTACCTTTGCGAA+CGG	+	chr5.1:75376935-75376954	None:intergenic	55.0%
	AGTAGTGGTGTGCGGCCATT+TGG	-	chr5.1:75377548-75377567	MS.gene63845:CDS	55.0%
	ATGTACCGGAAGGGTCGGTT+TGG	+	chr5.1:75377628-75377647	None:intergenic	55.0%
	CAACTCGGGCCCGGTTTATA+AGG	+	chr5.1:75377436-75377455	None:intergenic	55.0%
	CGAGTCTTGCAGTTTGGCAG+CGG	+	chr5.1:75377007-75377026	None:intergenic	55.0%
	CTGCCAAACTGCAAGACTCG+AGG	-	chr5.1:75377007-75377026	MS.gene63845:intron	55.0%
	GAATGGTCTGCGTCAACTGG+AGG	-	chr5.1:75378294-75378313	MS.gene63845:CDS	55.0%
	GCTCTTGAAGCCGTTCGCAA+AGG	-	chr5.1:75376922-75376941	MS.gene63845:CDS	55.0%
	GGAGAATGGTCTGCGTCAAC+TGG	-	chr5.1:75378291-75378310	MS.gene63845:CDS	55.0%
	GGCTATCAGCTCGTTGCTTG+AGG	-	chr5.1:75377751-75377770	MS.gene63845:CDS	55.0%
	GGGCTTTCGACGTTGATCGT+TGG	-	chr5.1:75377569-75377588	MS.gene63845:CDS	55.0%
	GTAGTGGTGTGCGGCCATTT+GGG	-	chr5.1:75377549-75377568	MS.gene63845:CDS	55.0%
	AGCAGAGAAGGCAGCTGCTG+AGG	-	chr5.1:75378351-75378370	MS.gene63845:CDS	60.0%
	CGCAAAGGTAACGCCGCTGT+TGG	-	chr5.1:75376937-75376956	MS.gene63845:CDS	60.0%
	TCTGGCATTCAACTCGGGCC+CGG	+	chr5.1:75377445-75377464	None:intergenic	60.0%
!	AACGCCGCTGTTGGTGTTCG+AGG	-	chr5.1:75376946-75376965	MS.gene63845:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	75376856	75378405	75376856	ID=MS.gene63845
chr5.1	mRNA	75376856	75378405	75376856	ID=MS.gene63845.t1;Parent=MS.gene63845
chr5.1	exon	75378233	75378405	75378233	ID=MS.gene63845.t1.exon1;Parent=MS.gene63845.t1
chr5.1	CDS	75378233	75378405	75378233	ID=cds.MS.gene63845.t1;Parent=MS.gene63845.t1
chr5.1	exon	75377489	75377903	75377489	ID=MS.gene63845.t1.exon2;Parent=MS.gene63845.t1
chr5.1	CDS	75377489	75377903	75377489	ID=cds.MS.gene63845.t1;Parent=MS.gene63845.t1
chr5.1	exon	75376856	75377017	75376856	ID=MS.gene63845.t1.exon3;Parent=MS.gene63845.t1
chr5.1	CDS	75376856	75377017	75376856	ID=cds.MS.gene63845.t1;Parent=MS.gene63845.t1

Gene Sequence

>MS.gene63845

ATGTCTCGGTATGATAGAGCTATCACAGTTTTCTCTCCTGATGGTCATCTCTTCCAAGTAGAGTATGCTCTTGAAGCCGTTCGCAAAGGTAACGCCGCTGTTGGTGTTCGAGGTACAGACAACGTCGTTCTCTGCGTGGAGAAAAAATCCGCTGCCAAACTGCAAGACTCGAGGTTAGATTTCACACTTTTTAGTGTTACACCATGCAATAAATTCCATGCTAGGTTAATCTGGATTCTAGGGTTTAAAACTCGATGATCAAGAATTGAGGACACTTGCATCATAGTATATCTTACCTTTTTTTTTTTGCTTTTATTATAAATTGTAACTTGAATCCTGTCGTATAATGCTCCGTTGCTCAACTAGAACTATAAGCAATTTTTTTCTTTTTCTTTCTTTCTTATACATCTGCTATATAGAAGTATATCCAACCAAACTGCTTATAATATATATAATATATGGATTTGGGTTTTTTTATAAACATTTTGCTTTTGTTTTGAAGATTGGTGAGGAAGATTGTTAGTTTGGATGATCATGTTGCTCTTGCTTGTGCTGGACTAAAAGCCGATGCTCGTGTCCTTATAAACCGGGCCCGAGTTGAATGCCAGAGTCATAGACTTACCGTTGAGGATCCTTGTACTGTGGAATACATAACCCGTTACATTGCAGGTCTTCAGCAAAAGTACACACAGAGTAGTGGTGTGCGGCCATTTGGGCTTTCGACGTTGATCGTTGGTTTTGATCCTTACACCGGGTCACCGTCTTTGTACCAAACCGACCCTTCCGGTACATTTTCGGCTTGGAAAGCTAACGCAACCGGAAGAAACTCAAGTTCAGTCCGTGAGTTTCTAGAGAAGAACTATAAAGACACCTCTGGGCAAGAAACTGTCAAATTGGCTATCAGCTCGTTGCTTGAGGTGAGTTAATTTTTGTCTTCTTTAATGCTTTTGAAATAAATATATATGATACCTATCATTCATTTATATTGCTTGTATGCTGCAACTTGTGCAAGATATTATTTTTTCTTGCTAGATGATATATAGGTGATGTCATTCTCCGCTCTTTCCATGTATATGTCTTTTACTATTTTAAACGCTGAGTGTGACTTTGGATTTGGAACAACTTTTAAGAGTGTCTTCAGTTCTTTATGTTTTCACTTTGCAAAATAAATGCATGGGGACGGAATGACCTTGACATAATTATTTGACTGCATATTAGGATGATGTTGAGTCATGATATTATATTCATGTGCATTGAATAAGATTGAAGCACAAATCTTATCAAATGTATGTTTGTGAAAGTAATTTTGTTTTTTGCTACTGCATAATTATTTATATAATACTATTATAGGGTAGTATTTTCATTTGGTTTTTCCTACATGTAATTAGGTTGTTGAGAGTGGAGGGAAGAACATTGAAGTTGCTGTGATGACCAAGGAGAATGGTCTGCGTCAACTGGAGGAAGCTGAAATTGACGCCATTGTCGCTGAGATTGAAGCAGAGAAGGCAGCTGCTGAGGCTGCAAAGAAAGCTCCTCCCAAGGACACATGA

Protein sequence

>MS.gene63845.t1

MSRYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLCVEKKSAAKLQDSRLVRKIVSLDDHVALACAGLKADARVLINRARVECQSHRLTVEDPCTVEYITRYIAGLQQKYTQSSGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSSSVREFLEKNYKDTSGQETVKLAISSLLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIVAEIEAEKAAAEAAKKAPPKDT