AlfalfaGEDB | MS.gene44226

M. sativa cultivar XinJiangDaYe / MS.gene44226

KEGG: K02731
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004298 GO:0005575 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0019773 GO:0019941 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0070003 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901575
PFAM: PF00227.29 PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44226.t1	XP_003629279.1	99.6	249	1	0	1	249	1	249	5.90E-131	476.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44226.t1	Q9SXU1	98.0	249	5	0	1	249	1	249	1.9e-130	466.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44226.t1	G7LB82	99.6	249	1	0	1	249	1	249	4.2e-131	476.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene41888	MS.gene44226	PPI
MS.gene44226	MS.gene74417	PPI
MS.gene44226	MS.gene22289	PPI
MS.gene055714	MS.gene44226	PPI
MS.gene31094	MS.gene44226	PPI
MS.gene44226	MS.gene26537	PPI
MS.gene44226	MS.gene066737	PPI
MS.gene015193	MS.gene44226	PPI
MS.gene012131	MS.gene44226	PPI
MS.gene046093	MS.gene44226	PPI
MS.gene63845	MS.gene44226	PPI
MS.gene28454	MS.gene44226	PPI
MS.gene92186	MS.gene44226	PPI
MS.gene43832	MS.gene44226	PPI
MS.gene071304	MS.gene44226	PPI
MS.gene44226	MS.gene57158	PPI
MS.gene89677	MS.gene44226	PPI
MS.gene09974	MS.gene44226	PPI
MS.gene44226	MS.gene071345	PPI
MS.gene47175	MS.gene44226	PPI
MS.gene77139	MS.gene44226	PPI
MS.gene70282	MS.gene44226	PPI
MS.gene030685	MS.gene44226	PPI
MS.gene44226	MS.gene99509	PPI
MS.gene44226	MS.gene41890	PPI
MS.gene42312	MS.gene44226	PPI
MS.gene028080	MS.gene44226	PPI
MS.gene74962	MS.gene44226	PPI
MS.gene64658	MS.gene44226	PPI
MS.gene068078	MS.gene44226	PPI
MS.gene028078	MS.gene44226	PPI
MS.gene074000	MS.gene44226	PPI
MS.gene44226	MS.gene008760	PPI
MS.gene024828	MS.gene44226	PPI
MS.gene068080	MS.gene44226	PPI
MS.gene69461	MS.gene44226	PPI
MS.gene064694	MS.gene44226	PPI
MS.gene071345	MS.gene44226	PPI
MS.gene44226	MS.gene070084	PPI
MS.gene066737	MS.gene44226	PPI
MS.gene44226	MS.gene70283	PPI
MS.gene24255	MS.gene44226	PPI
MS.gene24037	MS.gene44226	PPI
MS.gene052056	MS.gene44226	PPI
MS.gene44226	MS.gene45550	PPI
MS.gene066738	MS.gene44226	PPI
MS.gene44226	MS.gene24252	PPI
MS.gene061878	MS.gene44226	PPI
MS.gene27247	MS.gene44226	PPI
MS.gene017616	MS.gene44226	PPI
MS.gene014485	MS.gene44226	PPI
MS.gene029314	MS.gene44226	PPI
MS.gene039040	MS.gene44226	PPI
MS.gene24253	MS.gene44226	PPI
MS.gene44226	MS.gene27289	PPI
MS.gene29473	MS.gene44226	PPI
MS.gene72831	MS.gene44226	PPI
MS.gene44226	MS.gene21951	PPI
MS.gene09870	MS.gene44226	PPI
MS.gene58136	MS.gene44226	PPI
MS.gene26985	MS.gene44226	PPI
MS.gene024701	MS.gene44226	PPI
MS.gene58134	MS.gene44226	PPI
MS.gene025808	MS.gene44226	PPI
MS.gene29922	MS.gene44226	PPI
MS.gene40486	MS.gene44226	PPI
MS.gene068998	MS.gene44226	PPI
MS.gene44226	MS.gene76217	PPI
MS.gene48062	MS.gene44226	PPI
MS.gene44226	MS.gene21169	PPI
MS.gene44226	MS.gene39618	PPI
MS.gene84459	MS.gene44226	PPI
MS.gene64609	MS.gene44226	PPI
MS.gene78385	MS.gene44226	PPI
MS.gene28183	MS.gene44226	PPI
MS.gene84986	MS.gene44226	PPI
MS.gene006641	MS.gene44226	PPI
MS.gene55530	MS.gene44226	PPI
MS.gene015190	MS.gene44226	PPI
MS.gene030686	MS.gene44226	PPI
MS.gene045566	MS.gene44226	PPI
MS.gene90698	MS.gene44226	PPI
MS.gene015192	MS.gene44226	PPI
MS.gene043801	MS.gene44226	PPI
MS.gene29256	MS.gene44226	PPI
MS.gene20239	MS.gene44226	PPI
MS.gene97690	MS.gene44226	PPI
MS.gene21679	MS.gene44226	PPI
MS.gene32570	MS.gene44226	PPI
MS.gene44226	MS.gene21801	PPI
MS.gene065045	MS.gene44226	PPI
MS.gene071036	MS.gene44226	PPI
MS.gene074061	MS.gene44226	PPI
MS.gene44226	MS.gene77139	PPI
MS.gene24252	MS.gene44226	PPI
MS.gene058061	MS.gene44226	PPI
MS.gene44226	MS.gene57214	PPI
MS.gene44226	MS.gene012131	PPI
MS.gene070615	MS.gene44226	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44226.t1	MTR_8g075320	99.598	249	1	0	1	249	1	249	0.0	509
MS.gene44226.t1	MTR_2g016050	91.667	228	19	0	1	228	1	228	7.80e-157	436
MS.gene44226.t1	MTR_7g070070	42.500	200	112	3	3	200	4	202	3.82e-53	172
MS.gene44226.t1	MTR_0167s0060	38.462	234	139	3	2	232	4	235	4.98e-53	171
MS.gene44226.t1	MTR_5g016590	42.500	200	112	3	3	200	4	202	7.55e-53	172
MS.gene44226.t1	MTR_1g112250	40.171	234	130	5	4	231	8	237	6.64e-51	166
MS.gene44226.t1	MTR_8g464460	38.428	229	133	5	4	225	9	236	3.38e-42	144
MS.gene44226.t1	MTR_2g060830	39.394	231	128	7	4	225	9	236	9.56e-42	143
MS.gene44226.t1	MTR_1g022410	37.736	212	123	4	3	211	5	210	3.08e-37	132
MS.gene44226.t1	MTR_6g024135	35.260	173	110	1	4	176	8	178	2.09e-29	111
MS.gene44226.t1	MTR_4g012740	28.685	251	130	6	3	211	236	479	4.67e-19	86.3
MS.gene44226.t1	MTR_4g057090	29.545	176	115	4	25	196	110	280	1.38e-12	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene44226.t1	AT5G66140	90.400	250	23	1	1	249	1	250	4.34e-156	434
MS.gene44226.t1	AT3G51260	89.956	229	22	1	1	228	1	229	4.58e-153	426
MS.gene44226.t1	AT3G51260	91.509	212	18	0	1	212	1	212	4.47e-146	408
MS.gene44226.t1	AT3G22110	43.000	200	111	3	3	200	4	202	4.86e-54	175
MS.gene44226.t1	AT1G53850	41.453	234	127	5	4	231	8	237	3.06e-52	170
MS.gene44226.t1	AT1G53850	41.453	234	127	5	4	231	8	237	3.06e-52	170
MS.gene44226.t1	AT3G14290	42.035	226	123	4	4	223	8	231	1.17e-51	168
MS.gene44226.t1	AT1G16470	38.462	234	139	3	2	232	4	235	1.96e-51	167
MS.gene44226.t1	AT1G16470	38.462	234	139	3	2	232	4	235	1.96e-51	167
MS.gene44226.t1	AT1G79210	38.462	234	139	3	2	232	4	235	2.98e-51	167
MS.gene44226.t1	AT1G79210	38.462	234	139	3	2	232	4	235	2.98e-51	167
MS.gene44226.t1	AT1G79210	38.462	234	139	3	2	232	4	235	2.98e-51	167
MS.gene44226.t1	AT5G35590	38.627	233	133	4	2	230	7	233	1.11e-43	148
MS.gene44226.t1	AT2G05840	38.961	231	133	5	2	225	7	236	5.86e-42	144
MS.gene44226.t1	AT2G05840	38.679	212	125	3	2	209	7	217	3.07e-41	141
MS.gene44226.t1	AT1G47250	35.714	238	139	5	3	232	5	236	1.60e-39	138
MS.gene44226.t1	AT5G42790	35.294	238	140	5	3	232	5	236	3.40e-38	135
MS.gene44226.t1	AT2G05840	38.144	194	115	3	2	191	7	199	2.13e-37	130
MS.gene44226.t1	AT4G15165	34.500	200	86	4	3	200	4	160	2.62e-33	120
MS.gene44226.t1	AT2G27020	34.054	185	119	2	4	187	8	190	5.54e-30	112
MS.gene44226.t1	AT2G27020	34.054	185	119	2	4	187	110	292	1.01e-28	111

Find 57 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACATTGCTCTTGCTTGTGC+TGG	0.248856	8.1:+31795948	MS.gene44226:CDS
AGTGGTGGTGTGCGGCCATT+TGG	0.286590	8.1:+31796107	MS.gene44226:CDS
CCGCTAAGCTTCAAGATTCT+AGG	0.333653	8.1:+31795284	MS.gene44226:CDS
CAACAGTGAGCCTGTGACTC+TGG	0.389890	8.1:-31796019	None:intergenic
TAAAATCATGTGTCCTTAAG+AGG	0.395220	8.1:-31797305	None:intergenic
GTGGTGGTGTGCGGCCATTT+GGG	0.402302	8.1:+31796108	MS.gene44226:CDS
ATGCTCGTGTCTTGATAAAC+CGG	0.411856	8.1:+31795982	MS.gene44226:CDS
GGAGCACGGTCTGCGTCAAT+TGG	0.423486	8.1:+31797208	MS.gene44226:CDS
GGGCTTTCCACTTTGATCGT+TGG	0.425251	8.1:+31796128	MS.gene44226:CDS
GGTATCGATAACGTCGTTCT+CGG	0.435971	8.1:+31795244	MS.gene44226:CDS
CTGTACCAGACAGATCCTTC+TGG	0.439894	8.1:+31796179	MS.gene44226:CDS
ACATTGCTCTTGCTTGTGCT+GGG	0.466582	8.1:+31795949	MS.gene44226:CDS
AGTACGCTCTAGAAGCTGTT+AGG	0.467619	8.1:+31795194	MS.gene44226:CDS
TGCAAAGAAAGCTCCTCTTA+AGG	0.470575	8.1:+31797292	MS.gene44226:CDS
TCTGGCATTCAACGCGTGCC+CGG	0.479291	8.1:-31796001	None:intergenic
AACGCCGCCGTCGGTGTTCG+AGG	0.479962	8.1:+31795223	MS.gene44226:CDS
AGAGAGGGAGACCCGGTGTA+AGG	0.485987	8.1:-31796158	None:intergenic
GCATGGAAGGCAAATGCCAC+TGG	0.502242	8.1:+31796212	MS.gene44226:CDS
CGCTCTAGAAGCTGTTAGGA+AGG	0.506646	8.1:+31795198	MS.gene44226:CDS
ATCAAAGTGGAAAGCCCAAA+TGG	0.511316	8.1:-31796122	None:intergenic
TGGACAGGAAACTGTGAAGT+TGG	0.514356	8.1:+31796289	MS.gene44226:CDS
GCGTTGAATGCCAGAGTCAC+AGG	0.514781	8.1:+31796009	MS.gene44226:CDS
CCTAGAATCTTGAAGCTTAG+CGG	0.516530	8.1:-31795284	None:intergenic
GCTGGAGACCAGCTATGTAC+CGG	0.520483	8.1:-31796070	None:intergenic
AACTCACTTCAAGCAAAGCT+CGG	0.527308	8.1:-31796316	None:intergenic
TGTAATTAGGTTGTCGAGAG+TGG	0.529328	8.1:+31797152	MS.gene44226:intron
TATATTACCCGGTACATAGC+TGG	0.536354	8.1:+31796062	MS.gene44226:CDS
AGCAGAGAAAGCAGCTGCTG+AGG	0.545135	8.1:+31797268	MS.gene44226:CDS
ATGTACCAGAAGGATCTGTC+TGG	0.549205	8.1:-31796184	None:intergenic
GCACGGTCTGCGTCAATTGG+AGG	0.557429	8.1:+31797211	MS.gene44226:CDS
GTTGGCTTTGATCCTTACAC+CGG	0.563925	8.1:+31796146	MS.gene44226:CDS
GTAATATACTCCACAGTGCA+TGG	0.569706	8.1:-31796047	None:intergenic
AGGAAGGGTAACGCCGCCGT+CGG	0.581917	8.1:+31795214	MS.gene44226:CDS
CGAATTCGAGTTTCTGCCAG+TGG	0.583434	8.1:-31796228	None:intergenic
CTGGTACAGAGAGGGAGACC+CGG	0.593324	8.1:-31796165	None:intergenic
ATCGATACCTCGAACACCGA+CGG	0.594754	8.1:-31795230	None:intergenic
GGATCTGTCTGGTACAGAGA+GGG	0.600904	8.1:-31796173	None:intergenic
CATGCTGAAAATGTACCAGA+AGG	0.601249	8.1:-31796194	None:intergenic
CTGGAGACCAGCTATGTACC+GGG	0.601992	8.1:-31796069	None:intergenic
CAGCAAAAGTACACGCAAAG+TGG	0.610161	8.1:+31796089	MS.gene44226:CDS
TGAAGTTGCTGTGATGACTA+AGG	0.614312	8.1:+31797187	MS.gene44226:CDS
CTTCACAGTTTCCTGTCCAG+AGG	0.615209	8.1:-31796285	None:intergenic
AATTAGGTTGTCGAGAGTGG+TGG	0.616154	8.1:+31797155	MS.gene44226:intron
TGCTCGTGTCTTGATAAACC+GGG	0.619876	8.1:+31795983	MS.gene44226:CDS
AGCTGAAATTGATGCCATTG+TGG	0.626656	8.1:+31797235	MS.gene44226:CDS
ACACGCAAAGTGGTGGTGTG+CGG	0.627734	8.1:+31796099	MS.gene44226:CDS
TGCTTCAATCTCAGCCACAA+TGG	0.630980	8.1:-31797249	None:intergenic
AGAATCTTGAAGCTTAGCGG+TGG	0.631552	8.1:-31795281	None:intergenic
ATCAAAGCCAACGATCAAAG+TGG	0.632918	8.1:-31796135	None:intergenic
TTGGCTTTGATCCTTACACC+GGG	0.640792	8.1:+31796147	MS.gene44226:CDS
CAAAAGTACACGCAAAGTGG+TGG	0.643467	8.1:+31796092	MS.gene44226:CDS
GCTCTAGAAGCTGTTAGGAA+GGG	0.668408	8.1:+31795199	MS.gene44226:CDS
AGGATCTGTCTGGTACAGAG+AGG	0.675221	8.1:-31796174	None:intergenic
GCACTGTGGAGTATATTACC+CGG	0.676466	8.1:+31796051	MS.gene44226:CDS
GCTGTGATGACTAAGGAGCA+CGG	0.689211	8.1:+31797194	MS.gene44226:CDS
GATACCTCGAACACCGACGG+CGG	0.730013	8.1:-31795227	None:intergenic
TGTTGAAGATCCATGCACTG+TGG	0.770043	8.1:+31796037	MS.gene44226:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATAATATAATATGGATTT+GGG	+	chr8.1:31795862-31795881	MS.gene44226:intron	10.0%
!!	ATACTGCTTATAATATAATA+TGG	+	chr8.1:31795855-31795874	MS.gene44226:intron	15.0%
!!	ATATTATATTATAAGCAGTA+TGG	-	chr8.1:31795856-31795875	None:intergenic	15.0%
!!	ATTCTATCATTCATTTATAT+AGG	+	chr8.1:31796377-31796396	MS.gene44226:intron	15.0%
!!	CTTATAATATAATATGGATT+TGG	+	chr8.1:31795861-31795880	MS.gene44226:intron	15.0%
!!	TGTACATTCAAATATTATAA+TGG	+	chr8.1:31797008-31797027	MS.gene44226:intron	15.0%
!!!	TAAAAAGTAATGAAAAGTTT+TGG	-	chr8.1:31796959-31796978	None:intergenic	15.0%
!!	AAATTCCAAACAAAATTTCT+AGG	-	chr8.1:31795428-31795447	None:intergenic	20.0%
!!	AGAAGCTATTTGTTTATATA+CGG	+	chr8.1:31795761-31795780	MS.gene44226:intron	20.0%
!!	CTCAAATGAATGTTAAAAAA+GGG	-	chr8.1:31796729-31796748	None:intergenic	20.0%
!!	GCTATATAAAAAAAGAACTA+TGG	-	chr8.1:31795815-31795834	None:intergenic	20.0%
!!	TCTCAAATGAATGTTAAAAA+AGG	-	chr8.1:31796730-31796749	None:intergenic	20.0%
!!	TCTGATAAATACTTTACATT+TGG	+	chr8.1:31797111-31797130	MS.gene44226:intron	20.0%
!!!	AAAATACCAATAAACTTGTT+CGG	-	chr8.1:31795672-31795691	None:intergenic	20.0%
!!!	CTAGTAACTTGTTTTATATT+TGG	+	chr8.1:31797081-31797100	MS.gene44226:intron	20.0%
!!!	TGATTTTCATTTCTCAAATT+CGG	+	chr8.1:31795343-31795362	MS.gene44226:intron	20.0%
!!!	TTTATCCTAGAAATTTTGTT+TGG	+	chr8.1:31795420-31795439	MS.gene44226:intron	20.0%
!!!	TTTTTTTTGCTAGAAGATAT+AGG	+	chr8.1:31796414-31796433	MS.gene44226:intron	20.0%
!	GAAGCTATTTGTTTATATAC+GGG	+	chr8.1:31795762-31795781	MS.gene44226:intron	25.0%
!	GCATAACTGTAATACTATTA+TGG	+	chr8.1:31797057-31797076	MS.gene44226:intron	25.0%
!	GTGTTAGAAAGATATTCATA+CGG	+	chr8.1:31796605-31796624	MS.gene44226:intron	25.0%
!	TATGAATATCTTTCTAACAC+AGG	-	chr8.1:31796605-31796624	None:intergenic	25.0%
!	TCATTTATATAGGAATTTGC+AGG	+	chr8.1:31796387-31796406	MS.gene44226:intron	25.0%
!	TTAGAATCTTAGATCTAGTT+TGG	+	chr8.1:31795573-31795592	MS.gene44226:intron	25.0%
!!	TAGATCTAGTTTGGAAATAA+GGG	+	chr8.1:31795582-31795601	MS.gene44226:intron	25.0%
!!	TTAGATCTAGTTTGGAAATA+AGG	+	chr8.1:31795581-31795600	MS.gene44226:intron	25.0%
!!!	AATTCTTTTCTAGAAACTCA+CGG	-	chr8.1:31796256-31796275	None:intergenic	25.0%
!!!	ACTTGTTTTATATTTGGAAC+TGG	+	chr8.1:31797087-31797106	MS.gene44226:intron	25.0%
!!!	GGCAATTTAATTTTGAGATT+GGG	+	chr8.1:31795528-31795547	MS.gene44226:intron	25.0%
!!!	TCATTTTGCTTTTATTTTGC+AGG	+	chr8.1:31795895-31795914	MS.gene44226:intron	25.0%
!!!	TGGCAATTTAATTTTGAGAT+TGG	+	chr8.1:31795527-31795546	MS.gene44226:intron	25.0%
	AGAATCATTTGACTGCAATT+AGG	+	chr8.1:31796559-31796578	MS.gene44226:intron	30.0%
	AGATATTCATACGGTTAATC+TGG	+	chr8.1:31796614-31796633	MS.gene44226:intron	30.0%
	GATATTCATACGGTTAATCT+GGG	+	chr8.1:31796615-31796634	MS.gene44226:intron	30.0%
	TAGTATTACAGTTATGCAAC+AGG	-	chr8.1:31797054-31797073	None:intergenic	30.0%
	TTCTGATTGTTGATCAACAT+AGG	+	chr8.1:31796760-31796779	MS.gene44226:intron	30.0%
	TTTATGATATTCCTAGCTGA+TGG	+	chr8.1:31796975-31796994	MS.gene44226:intron	30.0%
!	AGATGTGAAGTAATTTGCAT+CGG	+	chr8.1:31795497-31795516	MS.gene44226:intron	30.0%
!	CTTTTGCAGTATAATTATCG+TGG	+	chr8.1:31796860-31796879	MS.gene44226:intron	30.0%
!	GCAGTCAAATGATTCTTTTA+AGG	-	chr8.1:31796555-31796574	None:intergenic	30.0%
!!	AAGAATTTTAAAGAGACCTC+TGG	+	chr8.1:31796269-31796288	MS.gene44226:CDS	30.0%
	ACTTGAAAAAGATGACCATC+GGG	-	chr8.1:31795172-31795191	None:intergenic	35.0%
	ATCATTTGACTGCAATTAGG+AGG	+	chr8.1:31796562-31796581	MS.gene44226:intron	35.0%
	CAAAGACCGAACAAGTTTAT+TGG	+	chr8.1:31795663-31795682	MS.gene44226:intron	35.0%
	CTTAAATCCTGCTATGAACT+GGG	+	chr8.1:31796685-31796704	MS.gene44226:intron	35.0%
	GACTTGAAAAAGATGACCAT+CGG	-	chr8.1:31795173-31795192	None:intergenic	35.0%
	GTTGATCAACAATCAGAAAG+AGG	-	chr8.1:31796758-31796777	None:intergenic	35.0%
	TCATAGCAGGATTTAAGGAA+TGG	-	chr8.1:31796682-31796701	None:intergenic	35.0%
!	GTGTTAGGTTTAGGATCTTA+GGG	+	chr8.1:31795365-31795384	MS.gene44226:intron	35.0%
!	TAATTTGCATCGGAGTGTAT+TGG	+	chr8.1:31795507-31795526	MS.gene44226:intron	35.0%
!!	CATTTCTCAAATTCGGTGTT+AGG	+	chr8.1:31795350-31795369	MS.gene44226:intron	35.0%
!!	TCAAATTCGGTGTTAGGTTT+AGG	+	chr8.1:31795356-31795375	MS.gene44226:intron	35.0%
!!!	TACATTTGGCTTTTCCTTGT+CGG	+	chr8.1:31797125-31797144	MS.gene44226:intron	35.0%
	AACTCACTTCAAGCAAAGCT+CGG	-	chr8.1:31796319-31796338	None:intergenic	40.0%
	AAGCTTCAAGATTCTAGGTC+TGG	+	chr8.1:31795289-31795308	MS.gene44226:intron	40.0%
	AGCTGAAATTGATGCCATTG+TGG	+	chr8.1:31797235-31797254	MS.gene44226:CDS	40.0%
	ATCAAAGCCAACGATCAAAG+TGG	-	chr8.1:31796138-31796157	None:intergenic	40.0%
	ATCAAAGTGGAAAGCCCAAA+TGG	-	chr8.1:31796125-31796144	None:intergenic	40.0%
	ATGCTCGTGTCTTGATAAAC+CGG	+	chr8.1:31795982-31796001	MS.gene44226:CDS	40.0%
	ATTCCTAGCTGATGGTTGTA+TGG	+	chr8.1:31796983-31797002	MS.gene44226:intron	40.0%
	CATGCTGAAAATGTACCAGA+AGG	-	chr8.1:31796197-31796216	None:intergenic	40.0%
	CCAGTTCATAGCAGGATTTA+AGG	-	chr8.1:31796687-31796706	None:intergenic	40.0%
	CCTAATTACACATACCGACA+AGG	-	chr8.1:31797142-31797161	None:intergenic	40.0%
	CCTAGAATCTTGAAGCTTAG+CGG	-	chr8.1:31795287-31795306	None:intergenic	40.0%
	CCTTAAATCCTGCTATGAAC+TGG	+	chr8.1:31796684-31796703	MS.gene44226:intron	40.0%
	CCTTGTCGGTATGTGTAATT+AGG	+	chr8.1:31797139-31797158	MS.gene44226:intron	40.0%
	CTGCAATTAGGAGGAAGTTT+AGG	+	chr8.1:31796571-31796590	MS.gene44226:intron	40.0%
	CTTGAAAAAGATGACCATCG+GGG	-	chr8.1:31795171-31795190	None:intergenic	40.0%
	GTAATATACTCCACAGTGCA+TGG	-	chr8.1:31796050-31796069	None:intergenic	40.0%
	TATATTACCCGGTACATAGC+TGG	+	chr8.1:31796062-31796081	MS.gene44226:CDS	40.0%
	TCATACGGTTAATCTGGGTT+TGG	+	chr8.1:31796620-31796639	MS.gene44226:intron	40.0%
	TGAAGTTGCTGTGATGACTA+AGG	+	chr8.1:31797187-31797206	MS.gene44226:CDS	40.0%
	TGCAAAGAAAGCTCCTCTTA+AGG	+	chr8.1:31797292-31797311	MS.gene44226:CDS	40.0%
	TTGAAAAAGATGACCATCGG+GGG	-	chr8.1:31795170-31795189	None:intergenic	40.0%
!	AAGGGACACTTAGTGCTATT+AGG	-	chr8.1:31796711-31796730	None:intergenic	40.0%
!	CTTAGGGTTTAGAGTGTGAT+TGG	+	chr8.1:31795381-31795400	MS.gene44226:intron	40.0%
!	CTTCTGGTACATTTTCAGCA+TGG	+	chr8.1:31796195-31796214	MS.gene44226:CDS	40.0%
!	GGTGTTAGGTTTAGGATCTT+AGG	+	chr8.1:31795364-31795383	MS.gene44226:intron	40.0%
!	TGGTACATTTTCAGCATGGA+AGG	+	chr8.1:31796199-31796218	MS.gene44226:CDS	40.0%
!	TGTAATTAGGTTGTCGAGAG+TGG	+	chr8.1:31797152-31797171	MS.gene44226:intron	40.0%
!!	TTTTAAAGAGACCTCTGGAC+AGG	+	chr8.1:31796274-31796293	MS.gene44226:CDS	40.0%
!!	TTTTATGACGTTGACTACCC+AGG	+	chr8.1:31796450-31796469	MS.gene44226:intron	40.0%
	AAGCCATACAACCATCAGCT+AGG	-	chr8.1:31796989-31797008	None:intergenic	45.0%
	ACATTGCTCTTGCTTGTGCT+GGG	+	chr8.1:31795949-31795968	MS.gene44226:CDS	45.0%
	AGAATCTTGAAGCTTAGCGG+TGG	-	chr8.1:31795284-31795303	None:intergenic	45.0%
	ATGTACCAGAAGGATCTGTC+TGG	-	chr8.1:31796187-31796206	None:intergenic	45.0%
	CCGCTAAGCTTCAAGATTCT+AGG	+	chr8.1:31795284-31795303	MS.gene44226:CDS	45.0%
	GCACAGTGTGGGTAAATTGT+TGG	-	chr8.1:31796652-31796671	None:intergenic	45.0%
	GCACTGTGGAGTATATTACC+CGG	+	chr8.1:31796051-31796070	MS.gene44226:CDS	45.0%
	TATTAGGCCCAGTTCATAGC+AGG	-	chr8.1:31796695-31796714	None:intergenic	45.0%
	TGCTCGTGTCTTGATAAACC+GGG	+	chr8.1:31795983-31796002	MS.gene44226:CDS	45.0%
	TGCTTCAATCTCAGCCACAA+TGG	-	chr8.1:31797252-31797271	None:intergenic	45.0%
	TGGACAGGAAACTGTGAAGT+TGG	+	chr8.1:31796289-31796308	MS.gene44226:CDS	45.0%
	TGTTGAAGATCCATGCACTG+TGG	+	chr8.1:31796037-31796056	MS.gene44226:CDS	45.0%
!	AATGGTCAGAAAGCACAGTG+TGG	-	chr8.1:31796664-31796683	None:intergenic	45.0%
!	AATTAGGTTGTCGAGAGTGG+TGG	+	chr8.1:31797155-31797174	MS.gene44226:intron	45.0%
!	ATGGTCAGAAAGCACAGTGT+GGG	-	chr8.1:31796663-31796682	None:intergenic	45.0%
!	CAAAAGTACACGCAAAGTGG+TGG	+	chr8.1:31796092-31796111	MS.gene44226:CDS	45.0%
!	CACTTTGCGTGTACTTTTGC+TGG	-	chr8.1:31796091-31796110	None:intergenic	45.0%
!	CAGCAAAAGTACACGCAAAG+TGG	+	chr8.1:31796089-31796108	MS.gene44226:CDS	45.0%
!	TCTTCCAAAGTACCACTCCT+GGG	-	chr8.1:31796470-31796489	None:intergenic	45.0%
!	TTCTTCCAAAGTACCACTCC+TGG	-	chr8.1:31796471-31796490	None:intergenic	45.0%
!!	AGTACGCTCTAGAAGCTGTT+AGG	+	chr8.1:31795194-31795213	MS.gene44226:CDS	45.0%
!!	GCTCTAGAAGCTGTTAGGAA+GGG	+	chr8.1:31795199-31795218	MS.gene44226:CDS	45.0%
!!	GGTATCGATAACGTCGTTCT+CGG	+	chr8.1:31795244-31795263	MS.gene44226:CDS	45.0%
!!	GTTGGCTTTGATCCTTACAC+CGG	+	chr8.1:31796146-31796165	MS.gene44226:CDS	45.0%
!!	TTGGCTTTGATCCTTACACC+GGG	+	chr8.1:31796147-31796166	MS.gene44226:CDS	45.0%
	ACTACCCAGGAGTGGTACTT+TGG	+	chr8.1:31796463-31796482	MS.gene44226:intron	50.0%
	AGGATCTGTCTGGTACAGAG+AGG	-	chr8.1:31796177-31796196	None:intergenic	50.0%
	ATCGATACCTCGAACACCGA+CGG	-	chr8.1:31795233-31795252	None:intergenic	50.0%
	CACATTGCTCTTGCTTGTGC+TGG	+	chr8.1:31795948-31795967	MS.gene44226:CDS	50.0%
	CTGTACCAGACAGATCCTTC+TGG	+	chr8.1:31796179-31796198	MS.gene44226:CDS	50.0%
	CTTCACAGTTTCCTGTCCAG+AGG	-	chr8.1:31796288-31796307	None:intergenic	50.0%
	GCTGTGATGACTAAGGAGCA+CGG	+	chr8.1:31797194-31797213	MS.gene44226:CDS	50.0%
	GGATCTGTCTGGTACAGAGA+GGG	-	chr8.1:31796176-31796195	None:intergenic	50.0%
	GGGCTTTCCACTTTGATCGT+TGG	+	chr8.1:31796128-31796147	MS.gene44226:CDS	50.0%
!	ATCACAGTTTTCTCCCCCGA+TGG	+	chr8.1:31795154-31795173	MS.gene44226:CDS	50.0%
!	CGAATTCGAGTTTCTGCCAG+TGG	-	chr8.1:31796231-31796250	None:intergenic	50.0%
!!	CGCTCTAGAAGCTGTTAGGA+AGG	+	chr8.1:31795198-31795217	MS.gene44226:CDS	50.0%
	AGCAGAGAAAGCAGCTGCTG+AGG	+	chr8.1:31797268-31797287	MS.gene44226:CDS	55.0%
	CAACAGTGAGCCTGTGACTC+TGG	-	chr8.1:31796022-31796041	None:intergenic	55.0%
	CTGGAGACCAGCTATGTACC+GGG	-	chr8.1:31796072-31796091	None:intergenic	55.0%
	GCATGGAAGGCAAATGCCAC+TGG	+	chr8.1:31796212-31796231	MS.gene44226:CDS	55.0%
	GCGTTGAATGCCAGAGTCAC+AGG	+	chr8.1:31796009-31796028	MS.gene44226:CDS	55.0%
	GCTGGAGACCAGCTATGTAC+CGG	-	chr8.1:31796073-31796092	None:intergenic	55.0%
!	ACACGCAAAGTGGTGGTGTG+CGG	+	chr8.1:31796099-31796118	MS.gene44226:CDS	55.0%
!	TGACGTTGACTACCCAGGAG+TGG	+	chr8.1:31796455-31796474	MS.gene44226:intron	55.0%
	AGAGAGGGAGACCCGGTGTA+AGG	-	chr8.1:31796161-31796180	None:intergenic	60.0%
	CTGGTACAGAGAGGGAGACC+CGG	-	chr8.1:31796168-31796187	None:intergenic	60.0%
	GATACCTCGAACACCGACGG+CGG	-	chr8.1:31795230-31795249	None:intergenic	60.0%
	GCACGGTCTGCGTCAATTGG+AGG	+	chr8.1:31797211-31797230	MS.gene44226:CDS	60.0%
	GGAGCACGGTCTGCGTCAAT+TGG	+	chr8.1:31797208-31797227	MS.gene44226:CDS	60.0%
	TCTGGCATTCAACGCGTGCC+CGG	-	chr8.1:31796004-31796023	None:intergenic	60.0%
!	AGTGGTGGTGTGCGGCCATT+TGG	+	chr8.1:31796107-31796126	MS.gene44226:CDS	60.0%
!	GTGGTGGTGTGCGGCCATTT+GGG	+	chr8.1:31796108-31796127	MS.gene44226:CDS	60.0%
	AGGAAGGGTAACGCCGCCGT+CGG	+	chr8.1:31795214-31795233	MS.gene44226:CDS	65.0%
!	AACGCCGCCGTCGGTGTTCG+AGG	+	chr8.1:31795223-31795242	MS.gene44226:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	31795133	31797322	31795133	ID=MS.gene44226
chr8.1	mRNA	31795133	31797322	31795133	ID=MS.gene44226.t1;Parent=MS.gene44226
chr8.1	exon	31795133	31795305	31795133	ID=MS.gene44226.t1.exon1;Parent=MS.gene44226.t1
chr8.1	CDS	31795133	31795305	31795133	ID=cds.MS.gene44226.t1;Parent=MS.gene44226.t1
chr8.1	exon	31795917	31796331	31795917	ID=MS.gene44226.t1.exon2;Parent=MS.gene44226.t1
chr8.1	CDS	31795917	31796331	31795917	ID=cds.MS.gene44226.t1;Parent=MS.gene44226.t1
chr8.1	exon	31797161	31797322	31797161	ID=MS.gene44226.t1.exon3;Parent=MS.gene44226.t1
chr8.1	CDS	31797161	31797322	31797161	ID=cds.MS.gene44226.t1;Parent=MS.gene44226.t1

Gene Sequence

>MS.gene44226

ATGGCAAGATACGACAGAGCGATCACAGTTTTCTCCCCCGATGGTCATCTTTTTCAAGTCGAGTACGCTCTAGAAGCTGTTAGGAAGGGTAACGCCGCCGTCGGTGTTCGAGGTATCGATAACGTCGTTCTCGGTGTTGAGAAGAAATCCACCGCTAAGCTTCAAGATTCTAGGTCTGGTTTCACACTTTTCTTCAATTTTTTATGCAATTGATTTTCATTTCTCAAATTCGGTGTTAGGTTTAGGATCTTAGGGTTTAGAGTGTGATTGGTGCTTTATGTTGTCTCTTTATCCTAGAAATTTTGTTTGGAATTTGTAGTGTCGAATGTTTTGTTGCTTTCGTTGTTGTTTTTCTCAGTGATGAAGATGTGAAGTAATTTGCATCGGAGTGTATTGGCAATTTAATTTTGAGATTGGGTTTTGCAATTTGTGTTGTGTAATTAGAATCTTAGATCTAGTTTGGAAATAAGGGTTTATAGCTTACAATAGCTTATTGATTGAAATAAGATTATATAGTTTTTCATTTGCAACAAAGACCGAACAAGTTTATTGGTATTTTATATTCTGTTATTTATATGAGAGAACTTTTGAAAAATTTGAGATGCTGAAACTAATTTTAGCTTGTATGAGAAGCTATTTGTTTATATACGGGTATAGTTATTGCAAATTCTTGCTTAATCCATAGTTCTTTTTTTATATAGCTTCTATATAAGAGTTTATCCATACTGCTTATAATATAATATGGATTTGGGTTGTTTACAATCATTTTGCTTTTATTTTGCAGGTCAGTGAGAAAGATTGTAAATCTAGACGATCACATTGCTCTTGCTTGTGCTGGGCTAAAAGCTGATGCTCGTGTCTTGATAAACCGGGCACGCGTTGAATGCCAGAGTCACAGGCTCACTGTTGAAGATCCATGCACTGTGGAGTATATTACCCGGTACATAGCTGGTCTCCAGCAAAAGTACACGCAAAGTGGTGGTGTGCGGCCATTTGGGCTTTCCACTTTGATCGTTGGCTTTGATCCTTACACCGGGTCTCCCTCTCTGTACCAGACAGATCCTTCTGGTACATTTTCAGCATGGAAGGCAAATGCCACTGGCAGAAACTCGAATTCGATCCGTGAGTTTCTAGAAAAGAATTTTAAAGAGACCTCTGGACAGGAAACTGTGAAGTTGGCTATCCGAGCTTTGCTTGAAGTGAGTTAATTTTCTCTTTAGTGCTTTTAAAAGAAATATTATCTGATTCTATCATTCATTTATATAGGAATTTGCAGGTTTTTTTTTTTTGCTAGAAGATATAGGTGTCTTTTACTCTTTTTATGACGTTGACTACCCAGGAGTGGTACTTTGGAAGAACTTTTAAAGTTTCTTCAGTTCTTTATGTTTTCACTTTGCAAAATAAATGTTTTGTGAGAGACCTTAAAAGAATCATTTGACTGCAATTAGGAGGAAGTTTAGGATGAATTACCTGTGTTAGAAAGATATTCATACGGTTAATCTGGGTTTGGCTTTTGCCAACAATTTACCCACACTGTGCTTTCTGACCATTCCTTAAATCCTGCTATGAACTGGGCCTAATAGCACTAAGTGTCCCTTTTTTAACATTCATTTGAGATCTTGCCTCTTTCTGATTGTTGATCAACATAGGTTTTTTATTGTACATATGAACAAACACAGTCAGTATAGTAAACTTGCTAGCTATACAATGTAGACATATAGCTTTTTCTTTTGCAGTATAATTATCGTGGAATAAGATTGAAACACAAATCTTATGTACTATGCGTTCACATTTACATGTGTTTAATCTATGATTCATTTATGCCAAAACTTTTCATTACTTTTTATGATATTCCTAGCTGATGGTTGTATGGCTTGTACATTCAAATATTATAATGGATCAAGCATTTTTGTCTGTTCCTGTTGCATAACTGTAATACTATTATGGACTAGTAACTTGTTTTATATTTGGAACTGGATCTGATAAATACTTTACATTTGGCTTTTCCTTGTCGGTATGTGTAATTAGGTTGTCGAGAGTGGTGGTAAGAACATTGAAGTTGCTGTGATGACTAAGGAGCACGGTCTGCGTCAATTGGAGGAAGCTGAAATTGATGCCATTGTGGCTGAGATTGAAGCAGAGAAAGCAGCTGCTGAGGCTGCAAAGAAAGCTCCTCTTAAGGACACATGA

Protein sequence

>MS.gene44226.t1

MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGIDNVVLGVEKKSTAKLQDSRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPCTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDAIVAEIEAEKAAAEAAKKAPLKDT