AlfalfaGEDB | MS.gene48062

M. sativa cultivar XinJiangDaYe / MS.gene48062

KEGG: K02731
GO: GO:0003674 GO:0003824 GO:0004175 GO:0004298 GO:0005575 GO:0005839 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0019773 GO:0019941 GO:0032991 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0051603 GO:0070003 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901575
PFAM: PF00227.29 PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene48062.t1	GAU34208.1	94	249	15	0	1	249	1	249	2.00E-123	451.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene48062.t1	Q9SXU1	94.0	249	15	0	1	249	1	249	1.1e-125	450.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene48062.t1	A0A2Z6MPD6	94.0	249	15	0	1	249	1	249	1.5e-123	451.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene89677	MS.gene48062	PPI
MS.gene48062	MS.gene045566	PPI
MS.gene48062	MS.gene72831	PPI
MS.gene48062	MS.gene028080	PPI
MS.gene48062	MS.gene74962	PPI
MS.gene48062	MS.gene014485	PPI
MS.gene48062	MS.gene27289	PPI
MS.gene48062	MS.gene008760	PPI
MS.gene48062	MS.gene074061	PPI
MS.gene48062	MS.gene21951	PPI
MS.gene068078	MS.gene48062	PPI
MS.gene48062	MS.gene024828	PPI
MS.gene48062	MS.gene28183	PPI
MS.gene69461	MS.gene48062	PPI
MS.gene48062	MS.gene26985	PPI
MS.gene064694	MS.gene48062	PPI
MS.gene48062	MS.gene92186	PPI
MS.gene48062	MS.gene074000	PPI
MS.gene48062	MS.gene97690	PPI
MS.gene48062	MS.gene24252	PPI
MS.gene24255	MS.gene48062	PPI
MS.gene48062	MS.gene76217	PPI
MS.gene24037	MS.gene48062	PPI
MS.gene48062	MS.gene21169	PPI
MS.gene48062	MS.gene39618	PPI
MS.gene48062	MS.gene065045	PPI
MS.gene061878	MS.gene48062	PPI
MS.gene48062	MS.gene068080	PPI
MS.gene48062	MS.gene058061	PPI
MS.gene27247	MS.gene48062	PPI
MS.gene017616	MS.gene48062	PPI
MS.gene48062	MS.gene21801	PPI
MS.gene48062	MS.gene64609	PPI
MS.gene48062	MS.gene071304	PPI
MS.gene48062	MS.gene070615	PPI
MS.gene48062	MS.gene024701	PPI
MS.gene48062	MS.gene41888	PPI
MS.gene48062	MS.gene58136	PPI
MS.gene48062	MS.gene09974	PPI
MS.gene29473	MS.gene48062	PPI
MS.gene48062	MS.gene77139	PPI
MS.gene09870	MS.gene48062	PPI
MS.gene48062	MS.gene015192	PPI
MS.gene48062	MS.gene43832	PPI
MS.gene48062	MS.gene043801	PPI
MS.gene48062	MS.gene030686	PPI
MS.gene58134	MS.gene48062	PPI
MS.gene48062	MS.gene028078	PPI
MS.gene025808	MS.gene48062	PPI
MS.gene48062	MS.gene071036	PPI
MS.gene29922	MS.gene48062	PPI
MS.gene48062	MS.gene015190	PPI
MS.gene48062	MS.gene47175	PPI
MS.gene48062	MS.gene74417	PPI
MS.gene48062	MS.gene22289	PPI
MS.gene40486	MS.gene48062	PPI
MS.gene48062	MS.gene32570	PPI
MS.gene48062	MS.gene78385	PPI
MS.gene84459	MS.gene48062	PPI
MS.gene48062	MS.gene90698	PPI
MS.gene64609	MS.gene48062	PPI
MS.gene48062	MS.gene26537	PPI
MS.gene48062	MS.gene63845	PPI
MS.gene84986	MS.gene48062	PPI
MS.gene006641	MS.gene48062	PPI
MS.gene48062	MS.gene57158	PPI
MS.gene48062	MS.gene066738	PPI
MS.gene48062	MS.gene052056	PPI
MS.gene29256	MS.gene48062	PPI
MS.gene20239	MS.gene48062	PPI
MS.gene21679	MS.gene48062	PPI
MS.gene48062	MS.gene55530	PPI
MS.gene48062	MS.gene44226	PPI
MS.gene48062	MS.gene99509	PPI
MS.gene48062	MS.gene41890	PPI
MS.gene48062	MS.gene57214	PPI
MS.gene48062	MS.gene012131	PPI
MS.gene48062	MS.gene42312	PPI
MS.gene48062	MS.gene24253	PPI
MS.gene48062	MS.gene046093	PPI
MS.gene070615	MS.gene48062	PPI
MS.gene48062	MS.gene017616	PPI
MS.gene48062	MS.gene066737	PPI
MS.gene48062	MS.gene029314	PPI
MS.gene055714	MS.gene48062	PPI
MS.gene48062	MS.gene070084	PPI
MS.gene31094	MS.gene48062	PPI
MS.gene48062	MS.gene70283	PPI
MS.gene48062	MS.gene70282	PPI
MS.gene48062	MS.gene64658	PPI
MS.gene48062	MS.gene068998	PPI
MS.gene48062	MS.gene030685	PPI
MS.gene48062	MS.gene071345	PPI
MS.gene48062	MS.gene45550	PPI
MS.gene015193	MS.gene48062	PPI
MS.gene48062	MS.gene039040	PPI
MS.gene28454	MS.gene48062	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene48062.t1	MTR_8g075320	93.173	249	17	0	1	249	1	249	3.50e-161	446
MS.gene48062.t1	MTR_2g016050	92.771	249	18	0	1	249	1	249	7.79e-159	441
MS.gene48062.t1	MTR_0167s0060	38.889	234	138	3	2	232	4	235	7.91e-54	174
MS.gene48062.t1	MTR_7g070070	42.500	200	112	3	3	200	4	202	5.63e-52	169
MS.gene48062.t1	MTR_5g016590	42.500	200	112	3	3	200	4	202	1.07e-51	169
MS.gene48062.t1	MTR_1g112250	43.564	202	108	3	2	199	6	205	5.70e-50	164
MS.gene48062.t1	MTR_8g464460	38.397	237	133	6	1	225	1	236	2.88e-43	147
MS.gene48062.t1	MTR_2g060830	38.494	239	130	8	1	225	1	236	5.13e-42	144
MS.gene48062.t1	MTR_1g022410	36.019	211	130	3	2	211	4	210	2.49e-36	130
MS.gene48062.t1	MTR_6g024135	34.104	173	112	1	4	176	8	178	6.97e-28	107
MS.gene48062.t1	MTR_4g012740	28.800	250	133	7	2	211	235	479	1.05e-18	85.1
MS.gene48062.t1	MTR_4g057090	28.409	176	117	4	25	196	110	280	1.63e-12	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene48062.t1	AT5G66140	88.400	250	28	1	1	249	1	250	7.10e-153	426
MS.gene48062.t1	AT3G51260	87.336	229	28	1	1	228	1	229	5.16e-149	416
MS.gene48062.t1	AT3G51260	88.679	212	24	0	1	212	1	212	9.39e-142	397
MS.gene48062.t1	AT3G22110	43.000	200	111	3	3	200	4	202	7.33e-53	172
MS.gene48062.t1	AT1G16470	38.462	234	139	3	2	232	4	235	7.47e-52	169
MS.gene48062.t1	AT1G16470	38.462	234	139	3	2	232	4	235	7.47e-52	169
MS.gene48062.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.70e-51	167
MS.gene48062.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.70e-51	167
MS.gene48062.t1	AT1G79210	38.462	234	139	3	2	232	4	235	1.70e-51	167
MS.gene48062.t1	AT1G53850	40.678	236	130	5	2	231	6	237	2.24e-51	167
MS.gene48062.t1	AT1G53850	40.678	236	130	5	2	231	6	237	2.24e-51	167
MS.gene48062.t1	AT3G14290	44.059	202	107	3	2	199	6	205	7.42e-51	166
MS.gene48062.t1	AT5G35590	38.819	237	132	6	1	225	1	236	1.35e-43	148
MS.gene48062.t1	AT2G05840	37.975	237	134	6	1	225	1	236	1.18e-41	143
MS.gene48062.t1	AT2G05840	37.615	218	126	4	1	209	1	217	2.01e-40	139
MS.gene48062.t1	AT5G42790	34.310	239	143	5	2	232	4	236	2.22e-38	135
MS.gene48062.t1	AT1G47250	33.891	239	144	5	2	232	4	236	2.31e-38	135
MS.gene48062.t1	AT2G05840	36.598	194	118	3	4	193	9	201	2.44e-36	128
MS.gene48062.t1	AT4G15165	35.000	200	85	4	3	200	4	160	4.67e-33	119
MS.gene48062.t1	AT2G27020	33.514	185	120	2	4	187	8	190	2.99e-28	108
MS.gene48062.t1	AT2G27020	33.514	185	120	2	4	187	110	292	3.33e-27	107

Find 67 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAACTCGGGCCCGGTTTATA+AGG	0.275165	5.3:-76674585	None:intergenic
AGTAGTGGTGTGCGGCCATT+TGG	0.275198	5.3:+76674700	MS.gene48062:CDS
GGTGAGGAAGATTGTTAGTT+TGG	0.281871	5.3:+76674513	MS.gene48062:CDS
TGGGCAAGAAACTGTCAAAT+TGG	0.335063	5.3:+76674882	MS.gene48062:CDS
CATGTTGCTCTTGCTTGTGC+TGG	0.361778	5.3:+76674541	MS.gene48062:CDS
GGAGAATGGTCTGCGTCAAC+TGG	0.398793	5.3:+76675470	MS.gene48062:CDS
TACATAACCCGTTACATTGC+AGG	0.399795	5.3:+76674655	MS.gene48062:CDS
TAACCTCGAGTCTTGCAGTT+TGG	0.402098	5.3:-76674126	None:intergenic
GATTGAACTTGAGTTTCTTC+CGG	0.402357	5.3:-76674824	None:intergenic
AACCTAGAATCATGTGTCCT+TGG	0.409440	5.3:-76675571	None:intergenic
CTTCAAGAGCATACTCTACT+TGG	0.421409	5.3:-76674025	None:intergenic
CTGAAGACCTGCAATGTAAC+GGG	0.426498	5.3:-76674662	None:intergenic
ATGCTCGTGTCCTTATAAAC+CGG	0.435736	5.3:+76674575	MS.gene48062:CDS
GTAGTGGTGTGCGGCCATTT+GGG	0.436998	5.3:+76674701	MS.gene48062:CDS
ATTAGGTTGTTGAGAGTGGA+GGG	0.456795	5.3:+76675418	MS.gene48062:intron
CGAGTCTTGCAGTTTGGCAG+CGG	0.458214	5.3:-76674120	None:intergenic
TGTAATTAGGTTGTTGAGAG+TGG	0.458926	5.3:+76675414	MS.gene48062:intron
TCTGGCATTCAACTCGGGCC+CGG	0.465148	5.3:-76674594	None:intergenic
GCTTGGAAAGCTAACGCAAC+CGG	0.470438	5.3:+76674805	MS.gene48062:CDS
ACCTAGAATCATGTGTCCTT+GGG	0.476679	5.3:-76675570	None:intergenic
ACTTGGAAGAGATGACCATC+AGG	0.480914	5.3:-76674008	None:intergenic
GGGCTTTCGACGTTGATCGT+TGG	0.483437	5.3:+76674721	MS.gene48062:CDS
TTGTACCAAACCGACCCTTC+CGG	0.487764	5.3:+76674772	MS.gene48062:CDS
CAACGGTAAGTCTATGACTC+TGG	0.487875	5.3:-76674612	None:intergenic
AACGCCGCTGTTGGTGTTCG+AGG	0.495321	5.3:+76674062	MS.gene48062:CDS
CGTTGAGGATCCTTGTACTG+TGG	0.495580	5.3:+76674630	MS.gene48062:CDS
CGCTGAGATTGAAGCAGAGA+AGG	0.501268	5.3:+76675518	MS.gene48062:CDS
ATGTACCGGAAGGGTCGGTT+TGG	0.502119	5.3:-76674777	None:intergenic
CGCAAAGGTAACGCCGCTGT+TGG	0.503142	5.3:+76674053	MS.gene48062:CDS
GGCTATCAGTTCGTTGCTTG+AGG	0.510114	5.3:+76674903	MS.gene48062:CDS
AAGAACTATAAAGACACCTC+TGG	0.510915	5.3:+76674862	MS.gene48062:CDS
AAAGACGGTGACCCGGTGTA+AGG	0.518981	5.3:-76674751	None:intergenic
AGCAGAGAAGGCAGCTGCTG+AGG	0.524478	5.3:+76675530	MS.gene48062:CDS
ATCAACGTCGAAAGCCCAAA+TGG	0.525799	5.3:-76674715	None:intergenic
GTTTATAAGGACACGAGCAT+CGG	0.528829	5.3:-76674572	None:intergenic
ATGACTCTGGCATTCAACTC+GGG	0.530398	5.3:-76674599	None:intergenic
TATGACTCTGGCATTCAACT+CGG	0.533537	5.3:-76674600	None:intergenic
GCTGAAGACCTGCAATGTAA+CGG	0.539298	5.3:-76674663	None:intergenic
AATTAGGTTGTTGAGAGTGG+AGG	0.542436	5.3:+76675417	MS.gene48062:intron
AGTTCTTCTCTAGAAACTCA+CGG	0.553509	5.3:-76674846	None:intergenic
TGCTCGTGTCCTTATAAACC+GGG	0.561137	5.3:+76674576	MS.gene48062:CDS
TTGACGCAGACCATTCTCCT+TGG	0.562828	5.3:-76675466	None:intergenic
AGCGGCGTTACCTTTGCGAA+CGG	0.567249	5.3:-76674048	None:intergenic
AGAACTATAAAGACACCTCT+GGG	0.578182	5.3:+76674863	MS.gene48062:CDS
TTTCCAAGCCGAAAATGTAC+CGG	0.590468	5.3:-76674791	None:intergenic
TGCTTCAATCTCAGCGACAA+TGG	0.601944	5.3:-76675511	None:intergenic
AGAAGAATATCAAAATGTCT+CGG	0.605446	5.3:+76673958	None:intergenic
GTTATGTATTCCACAGTACA+AGG	0.608705	5.3:-76674640	None:intergenic
GCTGTGATGACCAAGGAGAA+TGG	0.610505	5.3:+76675456	MS.gene48062:CDS
TAGAATCATGTGTCCTTGGG+AGG	0.611406	5.3:-76675567	None:intergenic
TGCAAAGAAAGTTCCTCCCA+AGG	0.612392	5.3:+76675554	MS.gene48062:CDS
GAATGGTCTGCGTCAACTGG+AGG	0.615416	5.3:+76675473	MS.gene48062:CDS
GCTCTTGAAGCCGTTCGCAA+AGG	0.618632	5.3:+76674038	MS.gene48062:CDS
CAAGCCGAAAATGTACCGGA+AGG	0.619903	5.3:-76674787	None:intergenic
CGAAAATGTACCGGAAGGGT+CGG	0.623923	5.3:-76674782	None:intergenic
TTGGTACAAAGACGGTGACC+CGG	0.625299	5.3:-76674758	None:intergenic
CAAAAGTACACACAGAGTAG+TGG	0.631460	5.3:+76674685	MS.gene48062:CDS
AAGCCGAAAATGTACCGGAA+GGG	0.641577	5.3:-76674786	None:intergenic
CTGCCAAACTGCAAGACTCG+AGG	0.647953	5.3:+76674123	MS.gene48062:CDS
AGACAACGTCGTTCTCTGCG+TGG	0.656938	5.3:+76674088	MS.gene48062:CDS
GGGTCGGTTTGGTACAAAGA+CGG	0.662196	5.3:-76674766	None:intergenic
TTTGACAGTTTCTTGCCCAG+AGG	0.662254	5.3:-76674878	None:intergenic
CACAGTACAAGGATCCTCAA+CGG	0.666452	5.3:-76674629	None:intergenic
ACACACAGAGTAGTGGTGTG+CGG	0.698448	5.3:+76674692	MS.gene48062:CDS
GAGTCATAGACTTACCGTTG+AGG	0.701059	5.3:+76674615	MS.gene48062:CDS
TGTACCTCGAACACCAACAG+CGG	0.713203	5.3:-76674066	None:intergenic
TGAAGTTGCTGTGATGACCA+AGG	0.749955	5.3:+76675449	MS.gene48062:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAAAAAAAAAAAA+AGG	-	chr5.3:76674269-76674288	None:intergenic	0.0%
!!	ATATATATAATATATGGATT+TGG	+	chr5.3:76674453-76674472	MS.gene48062:intron	10.0%
!!	TATATATAATATATGGATTT+GGG	+	chr5.3:76674454-76674473	MS.gene48062:intron	10.0%
!!	TATATATATTATAAGCAGTT+TGG	-	chr5.3:76674442-76674461	None:intergenic	15.0%
!!	TAATTATTTGACTGCATATT+AGG	+	chr5.3:76675204-76675223	MS.gene48062:intron	20.0%
!	AATAGTAAAAGACAGATACA+TGG	-	chr5.3:76675076-76675095	None:intergenic	25.0%
!	ACTTTGCAAAATAAATGCAT+GGG	+	chr5.3:76675163-76675182	MS.gene48062:intron	25.0%
!	GCAGTCAAATAATTATGTTA+AGG	-	chr5.3:76675199-76675218	None:intergenic	25.0%
!	TACTTTCATAGATTAAAGAC+AGG	-	chr5.3:76675318-76675337	None:intergenic	25.0%
!	TATATTATAAGCAGTTTGGT+TGG	-	chr5.3:76674438-76674457	None:intergenic	25.0%
!	TTTCTTGCTAGATGATATAT+AGG	+	chr5.3:76675029-76675048	MS.gene48062:intron	25.0%
!!	TATAGGGTAGTATTTTCATT+TGG	+	chr5.3:76675380-76675399	MS.gene48062:intron	25.0%
!!!	TTTGCTTTTGTTTTGAAGAT+TGG	+	chr5.3:76674492-76674511	MS.gene48062:intron	25.0%
	CACTTTGCAAAATAAATGCA+TGG	+	chr5.3:76675162-76675181	MS.gene48062:intron	30.0%
	CTTTGCAAAATAAATGCATG+GGG	+	chr5.3:76675164-76675183	MS.gene48062:intron	30.0%
	TCAACAACCTAATTACATGT+AGG	-	chr5.3:76675411-76675430	None:intergenic	30.0%
!	GGTTTTTCCTACATGTAATT+AGG	+	chr5.3:76675401-76675420	MS.gene48062:intron	30.0%
!!	TTATAGTTCTAGTTGAGCAA+CGG	-	chr5.3:76674362-76674381	None:intergenic	30.0%
!!!	TTTTGTTTTGAAGATTGGTG+AGG	+	chr5.3:76674497-76674516	MS.gene48062:intron	30.0%
	AACTCGATGATCAAGAATTG+AGG	+	chr5.3:76674220-76674239	MS.gene48062:intron	35.0%
	AAGAACTATAAAGACACCTC+TGG	+	chr5.3:76674862-76674881	MS.gene48062:CDS	35.0%
	AATTCCATGCTAGGTTAATC+TGG	+	chr5.3:76674183-76674202	MS.gene48062:intron	35.0%
	AGAACTATAAAGACACCTCT+GGG	+	chr5.3:76674863-76674882	MS.gene48062:CDS	35.0%
	CATGCAATAAATTCCATGCT+AGG	+	chr5.3:76674174-76674193	MS.gene48062:intron	35.0%
	CTAGCATGGAATTTATTGCA+TGG	-	chr5.3:76674176-76674195	None:intergenic	35.0%
	CTAGGTTAATCTGGATTCTA+GGG	+	chr5.3:76674192-76674211	MS.gene48062:intron	35.0%
	GATTGAACTTGAGTTTCTTC+CGG	-	chr5.3:76674827-76674846	None:intergenic	35.0%
	GTTATGTATTCCACAGTACA+AGG	-	chr5.3:76674643-76674662	None:intergenic	35.0%
!	AGTTCTTCTCTAGAAACTCA+CGG	-	chr5.3:76674849-76674868	None:intergenic	35.0%
!	TGTAATTAGGTTGTTGAGAG+TGG	+	chr5.3:76675414-76675433	MS.gene48062:intron	35.0%
	AGACAGATACATGGAAAGAG+CGG	-	chr5.3:76675067-76675086	None:intergenic	40.0%
	ATGCTCGTGTCCTTATAAAC+CGG	+	chr5.3:76674575-76674594	MS.gene48062:CDS	40.0%
	GAATCCAGATTAACCTAGCA+TGG	-	chr5.3:76674190-76674209	None:intergenic	40.0%
	GCAAAATAAATGCATGGGGA+CGG	+	chr5.3:76675168-76675187	MS.gene48062:intron	40.0%
	GCTAGGTTAATCTGGATTCT+AGG	+	chr5.3:76674191-76674210	MS.gene48062:intron	40.0%
	GGTGAGGAAGATTGTTAGTT+TGG	+	chr5.3:76674513-76674532	MS.gene48062:CDS	40.0%
	GTTTATAAGGACACGAGCAT+CGG	-	chr5.3:76674575-76674594	None:intergenic	40.0%
	TACATAACCCGTTACATTGC+AGG	+	chr5.3:76674655-76674674	MS.gene48062:CDS	40.0%
	TATGACTCTGGCATTCAACT+CGG	-	chr5.3:76674603-76674622	None:intergenic	40.0%
	TGGGCAAGAAACTGTCAAAT+TGG	+	chr5.3:76674882-76674901	MS.gene48062:CDS	40.0%
	TTAAACGCTGAGTGTGACTT+TGG	+	chr5.3:76675096-76675115	MS.gene48062:intron	40.0%
	TTTCCAAGCCGAAAATGTAC+CGG	-	chr5.3:76674794-76674813	None:intergenic	40.0%
!	AATTAGGTTGTTGAGAGTGG+AGG	+	chr5.3:76675417-76675436	MS.gene48062:intron	40.0%
!	ATCACAGTTTTCTCTCCTGA+TGG	+	chr5.3:76673993-76674012	MS.gene48062:CDS	40.0%
!	ATTAGGTTGTTGAGAGTGGA+GGG	+	chr5.3:76675418-76675437	MS.gene48062:intron	40.0%
!	CAAAAGTACACACAGAGTAG+TGG	+	chr5.3:76674685-76674704	MS.gene48062:CDS	40.0%
!	CTTCAAGAGCATACTCTACT+TGG	-	chr5.3:76674028-76674047	None:intergenic	40.0%
!!!	GTTGGTTTTGATCCTTACAC+CGG	+	chr5.3:76674739-76674758	MS.gene48062:CDS	40.0%
!!!	TTGGTTTTGATCCTTACACC+GGG	+	chr5.3:76674740-76674759	MS.gene48062:CDS	40.0%
	AAGCCGAAAATGTACCGGAA+GGG	-	chr5.3:76674789-76674808	None:intergenic	45.0%
	ACTTGGAAGAGATGACCATC+AGG	-	chr5.3:76674011-76674030	None:intergenic	45.0%
	ATCAACGTCGAAAGCCCAAA+TGG	-	chr5.3:76674718-76674737	None:intergenic	45.0%
	ATGACTCTGGCATTCAACTC+GGG	-	chr5.3:76674602-76674621	None:intergenic	45.0%
	CAACGGTAAGTCTATGACTC+TGG	-	chr5.3:76674615-76674634	None:intergenic	45.0%
	CACAGTACAAGGATCCTCAA+CGG	-	chr5.3:76674632-76674651	None:intergenic	45.0%
	CTGAAGACCTGCAATGTAAC+GGG	-	chr5.3:76674665-76674684	None:intergenic	45.0%
	GAGTCATAGACTTACCGTTG+AGG	+	chr5.3:76674615-76674634	MS.gene48062:CDS	45.0%
	GCTGAAGACCTGCAATGTAA+CGG	-	chr5.3:76674666-76674685	None:intergenic	45.0%
	GCTGAGTGTGACTTTGGATT+TGG	+	chr5.3:76675102-76675121	MS.gene48062:intron	45.0%
	TAACCTCGAGTCTTGCAGTT+TGG	-	chr5.3:76674129-76674148	None:intergenic	45.0%
	TGAAGTTGCTGTGATGACCA+AGG	+	chr5.3:76675449-76675468	MS.gene48062:CDS	45.0%
	TGCAAAGAAAGTTCCTCCCA+AGG	+	chr5.3:76675554-76675573	MS.gene48062:CDS	45.0%
	TGCTCGTGTCCTTATAAACC+GGG	+	chr5.3:76674576-76674595	MS.gene48062:CDS	45.0%
	TGCTTCAATCTCAGCGACAA+TGG	-	chr5.3:76675514-76675533	None:intergenic	45.0%
	TTTGACAGTTTCTTGCCCAG+AGG	-	chr5.3:76674881-76674900	None:intergenic	45.0%
!	GCAACGGAGCATTATACAAC+AGG	-	chr5.3:76674346-76674365	None:intergenic	45.0%
!!	ATTTATATAATACTATTATA+GGG	+	chr5.3:76675364-76675383	MS.gene48062:intron	5.0%
!!	CTTATAATATATATAATATA+TGG	+	chr5.3:76674447-76674466	MS.gene48062:intron	5.0%
!!	TATTTATATAATACTATTAT+AGG	+	chr5.3:76675363-76675382	MS.gene48062:intron	5.0%
	ACACACAGAGTAGTGGTGTG+CGG	+	chr5.3:76674692-76674711	MS.gene48062:CDS	50.0%
	CAAGCCGAAAATGTACCGGA+AGG	-	chr5.3:76674790-76674809	None:intergenic	50.0%
	CATGTTGCTCTTGCTTGTGC+TGG	+	chr5.3:76674541-76674560	MS.gene48062:CDS	50.0%
	CGAAAATGTACCGGAAGGGT+CGG	-	chr5.3:76674785-76674804	None:intergenic	50.0%
	CGCTGAGATTGAAGCAGAGA+AGG	+	chr5.3:76675518-76675537	MS.gene48062:CDS	50.0%
	CGTTGAGGATCCTTGTACTG+TGG	+	chr5.3:76674630-76674649	MS.gene48062:CDS	50.0%
	GCTGTGATGACCAAGGAGAA+TGG	+	chr5.3:76675456-76675475	MS.gene48062:CDS	50.0%
	GCTTGGAAAGCTAACGCAAC+CGG	+	chr5.3:76674805-76674824	MS.gene48062:CDS	50.0%
	GGCTATCAGTTCGTTGCTTG+AGG	+	chr5.3:76674903-76674922	MS.gene48062:CDS	50.0%
	TGTACCTCGAACACCAACAG+CGG	-	chr5.3:76674069-76674088	None:intergenic	50.0%
	TTGACGCAGACCATTCTCCT+TGG	-	chr5.3:76675469-76675488	None:intergenic	50.0%
	TTGGTACAAAGACGGTGACC+CGG	-	chr5.3:76674761-76674780	None:intergenic	50.0%
	TTGTACCAAACCGACCCTTC+CGG	+	chr5.3:76674772-76674791	MS.gene48062:CDS	50.0%
!	CGACCCTTCCGGTACATTTT+CGG	+	chr5.3:76674783-76674802	MS.gene48062:CDS	50.0%
!	CTTCCGGTACATTTTCGGCT+TGG	+	chr5.3:76674788-76674807	MS.gene48062:CDS	50.0%
!!	GGGTCGGTTTGGTACAAAGA+CGG	-	chr5.3:76674769-76674788	None:intergenic	50.0%
	AAAGACGGTGACCCGGTGTA+AGG	-	chr5.3:76674754-76674773	None:intergenic	55.0%
	AGACAACGTCGTTCTCTGCG+TGG	+	chr5.3:76674088-76674107	MS.gene48062:CDS	55.0%
	AGCGGCGTTACCTTTGCGAA+CGG	-	chr5.3:76674051-76674070	None:intergenic	55.0%
	AGTAGTGGTGTGCGGCCATT+TGG	+	chr5.3:76674700-76674719	MS.gene48062:CDS	55.0%
	ATGTACCGGAAGGGTCGGTT+TGG	-	chr5.3:76674780-76674799	None:intergenic	55.0%
	CAACTCGGGCCCGGTTTATA+AGG	-	chr5.3:76674588-76674607	None:intergenic	55.0%
	CGAGTCTTGCAGTTTGGCAG+CGG	-	chr5.3:76674123-76674142	None:intergenic	55.0%
	CTGCCAAACTGCAAGACTCG+AGG	+	chr5.3:76674123-76674142	MS.gene48062:CDS	55.0%
	GAATGGTCTGCGTCAACTGG+AGG	+	chr5.3:76675473-76675492	MS.gene48062:CDS	55.0%
	GCTCTTGAAGCCGTTCGCAA+AGG	+	chr5.3:76674038-76674057	MS.gene48062:CDS	55.0%
	GGAGAATGGTCTGCGTCAAC+TGG	+	chr5.3:76675470-76675489	MS.gene48062:CDS	55.0%
	GGGCTTTCGACGTTGATCGT+TGG	+	chr5.3:76674721-76674740	MS.gene48062:CDS	55.0%
	GTAGTGGTGTGCGGCCATTT+GGG	+	chr5.3:76674701-76674720	MS.gene48062:CDS	55.0%
	AGCAGAGAAGGCAGCTGCTG+AGG	+	chr5.3:76675530-76675549	MS.gene48062:CDS	60.0%
	CGCAAAGGTAACGCCGCTGT+TGG	+	chr5.3:76674053-76674072	MS.gene48062:CDS	60.0%
	TCTGGCATTCAACTCGGGCC+CGG	-	chr5.3:76674597-76674616	None:intergenic	60.0%
!	AACGCCGCTGTTGGTGTTCG+AGG	+	chr5.3:76674062-76674081	MS.gene48062:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	76673972	76675584	76673972	ID=MS.gene48062
chr5.3	mRNA	76673972	76675584	76673972	ID=MS.gene48062.t1;Parent=MS.gene48062
chr5.3	exon	76673972	76674144	76673972	ID=MS.gene48062.t1.exon1;Parent=MS.gene48062.t1
chr5.3	CDS	76673972	76674144	76673972	ID=cds.MS.gene48062.t1;Parent=MS.gene48062.t1
chr5.3	exon	76674510	76674924	76674510	ID=MS.gene48062.t1.exon2;Parent=MS.gene48062.t1
chr5.3	CDS	76674510	76674924	76674510	ID=cds.MS.gene48062.t1;Parent=MS.gene48062.t1
chr5.3	exon	76675423	76675584	76675423	ID=MS.gene48062.t1.exon3;Parent=MS.gene48062.t1
chr5.3	CDS	76675423	76675584	76675423	ID=cds.MS.gene48062.t1;Parent=MS.gene48062.t1

Gene Sequence

>MS.gene48062

ATGTCTCGGTATGATAGAGCTATCACAGTTTTCTCTCCTGATGGTCATCTCTTCCAAGTAGAGTATGCTCTTGAAGCCGTTCGCAAAGGTAACGCCGCTGTTGGTGTTCGAGGTACAGACAACGTCGTTCTCTGCGTGGAGAAAAAATCCGCTGCCAAACTGCAAGACTCGAGGTTAGATTTCACACTTTTTAGTGTTACACCATGCAATAAATTCCATGCTAGGTTAATCTGGATTCTAGGGTTTAAAACTCGATGATCAAGAATTGAGGACACTTGCATCATAGTATATCTTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTGAGAATGCTACGCTTTTATTATAAATTGTAACTTGAATCCTGTTGTATAATGCTCCGTTGCTCAACTAGAACTATAAGCAATTTTTTTCTTTTTCTTTCTTTCTTATACATCTGCTATATAGAAGTATATCCAACCAAACTGCTTATAATATATATAATATATGGATTTGGGTTTTTTTATAAACATTTTGCTTTTGTTTTGAAGATTGGTGAGGAAGATTGTTAGTTTGGATGATCATGTTGCTCTTGCTTGTGCTGGACTAAAAGCCGATGCTCGTGTCCTTATAAACCGGGCCCGAGTTGAATGCCAGAGTCATAGACTTACCGTTGAGGATCCTTGTACTGTGGAATACATAACCCGTTACATTGCAGGTCTTCAGCAAAAGTACACACAGAGTAGTGGTGTGCGGCCATTTGGGCTTTCGACGTTGATCGTTGGTTTTGATCCTTACACCGGGTCACCGTCTTTGTACCAAACCGACCCTTCCGGTACATTTTCGGCTTGGAAAGCTAACGCAACCGGAAGAAACTCAAGTTCAATCCGTGAGTTTCTAGAGAAGAACTATAAAGACACCTCTGGGCAAGAAACTGTCAAATTGGCTATCAGTTCGTTGCTTGAGGTGAGTTAATTTTTGTCTTCTTTAATGCTTTTGAAATAAATATATATGATACATATCATTCATTTATATAGCTTGTATGCTGCAACTTGTGCAAGATATTATTTTTTCTTGCTAGATGATATATAGGTGATGTCATTCTCCGCTCTTTCCATGTATCTGTCTTTTACTATTTTAAACGCTGAGTGTGACTTTGGATTTGGAACAACTTTTAAGAGTGTCTTCAGTTCTTTATGTTTTCACTTTGCAAAATAAATGCATGGGGACGGAATGACCTTAACATAATTATTTGACTGCATATTAGGATGATGTTGAGTCATGATATTATATTCATGTGCATTGAATAAGATTGAAGCACAAATCTTATCAAATGTATGTTTGTGTTAACATTTACCTGTCTTTAATCTATGAAAGTAATTTTGTTTTTTGCTACTGCATAATTATTTATATAATACTATTATAGGGTAGTATTTTCATTTGGTTTTTCCTACATGTAATTAGGTTGTTGAGAGTGGAGGGAAGAACATTGAAGTTGCTGTGATGACCAAGGAGAATGGTCTGCGTCAACTGGAGGAAGCTGAAATTGACGCCATTGTCGCTGAGATTGAAGCAGAGAAGGCAGCTGCTGAGGCTGCAAAGAAAGTTCCTCCCAAGGACACATGA

Protein sequence

>MS.gene48062.t1

MSRYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLCVEKKSAAKLQDSRLVRKIVSLDDHVALACAGLKADARVLINRARVECQSHRLTVEDPCTVEYITRYIAGLQQKYTQSSGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSSSIREFLEKNYKDTSGQETVKLAISSLLEVVESGGKNIEVAVMTKENGLRQLEEAEIDAIVAEIEAEKAAAEAAKKVPPKDT