Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27272.t1 | XP_003589343.2 | 97 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 1.30E-198 | 702.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27272.t1 | Q851Q6 | 67.2 | 366 | 114 | 2 | 1 | 360 | 137 | 502 | 1.1e-137 | 491.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27272.t1 | G7I5V4 | 97.0 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 9.1e-199 | 702.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049153 | MS.gene27272 | 0.806154 | 9.44E-50 | -1.69E-46 |
MS.gene049260 | MS.gene27272 | 0.810996 | 8.73E-51 | -1.69E-46 |
MS.gene049297 | MS.gene27272 | 0.85691 | 2.34E-62 | -1.69E-46 |
MS.gene049758 | MS.gene27272 | 0.814196 | 1.74E-51 | -1.69E-46 |
MS.gene050099 | MS.gene27272 | 0.823859 | 1.10E-53 | -1.69E-46 |
MS.gene050301 | MS.gene27272 | 0.845472 | 3.98E-59 | -1.69E-46 |
MS.gene050406 | MS.gene27272 | 0.803293 | 3.74E-49 | -1.69E-46 |
MS.gene050529 | MS.gene27272 | 0.812737 | 3.65E-51 | -1.69E-46 |
MS.gene050642 | MS.gene27272 | 0.873494 | 1.41E-67 | -1.69E-46 |
MS.gene050812 | MS.gene27272 | 0.811852 | 5.69E-51 | -1.69E-46 |
MS.gene051171 | MS.gene27272 | 0.803728 | 3.04E-49 | -1.69E-46 |
MS.gene051240 | MS.gene27272 | 0.832389 | 9.72E-56 | -1.69E-46 |
MS.gene051242 | MS.gene27272 | 0.828059 | 1.11E-54 | -1.69E-46 |
MS.gene051471 | MS.gene27272 | 0.822587 | 2.19E-53 | -1.69E-46 |
MS.gene051582 | MS.gene27272 | 0.803493 | 3.40E-49 | -1.69E-46 |
MS.gene051662 | MS.gene27272 | 0.834729 | 2.53E-56 | -1.69E-46 |
MS.gene051663 | MS.gene27272 | 0.813986 | 1.94E-51 | -1.69E-46 |
MS.gene051860 | MS.gene27272 | 0.806095 | 9.72E-50 | -1.69E-46 |
MS.gene051983 | MS.gene27272 | 0.875256 | 3.56E-68 | -1.69E-46 |
MS.gene052176 | MS.gene27272 | 0.800589 | 1.34E-48 | -1.69E-46 |
MS.gene052178 | MS.gene27272 | 0.807427 | 5.08E-50 | -1.69E-46 |
MS.gene052188 | MS.gene27272 | 0.821619 | 3.67E-53 | -1.69E-46 |
MS.gene052309 | MS.gene27272 | -0.813036 | 3.14E-51 | -1.69E-46 |
MS.gene052340 | MS.gene27272 | 0.829841 | 4.11E-55 | -1.69E-46 |
MS.gene052600 | MS.gene27272 | 0.874082 | 8.92E-68 | -1.69E-46 |
MS.gene053330 | MS.gene27272 | 0.813891 | 2.03E-51 | -1.69E-46 |
MS.gene053557 | MS.gene27272 | 0.830612 | 2.66E-55 | -1.69E-46 |
MS.gene053836 | MS.gene27272 | 0.861512 | 9.74E-64 | -1.69E-46 |
MS.gene053907 | MS.gene27272 | 0.866457 | 2.81E-65 | -1.69E-46 |
MS.gene053928 | MS.gene27272 | 0.810998 | 8.72E-51 | -1.69E-46 |
MS.gene053971 | MS.gene27272 | 0.823772 | 1.16E-53 | -1.69E-46 |
MS.gene054942 | MS.gene27272 | 0.858503 | 7.88E-63 | -1.69E-46 |
MS.gene054983 | MS.gene27272 | 0.813865 | 2.06E-51 | -1.69E-46 |
MS.gene055422 | MS.gene27272 | 0.83578 | 1.38E-56 | -1.69E-46 |
MS.gene055428 | MS.gene27272 | 0.825804 | 3.84E-54 | -1.69E-46 |
MS.gene05553 | MS.gene27272 | 0.849844 | 2.49E-60 | -1.69E-46 |
MS.gene055971 | MS.gene27272 | 0.804872 | 1.75E-49 | -1.69E-46 |
MS.gene056451 | MS.gene27272 | 0.80758 | 4.72E-50 | -1.69E-46 |
MS.gene056612 | MS.gene27272 | 0.837979 | 3.78E-57 | -1.69E-46 |
MS.gene056659 | MS.gene27272 | 0.802905 | 4.49E-49 | -1.69E-46 |
MS.gene056664 | MS.gene27272 | 0.802785 | 4.76E-49 | -1.69E-46 |
MS.gene056979 | MS.gene27272 | 0.869747 | 2.46E-66 | -1.69E-46 |
MS.gene05702 | MS.gene27272 | 0.813288 | 2.76E-51 | -1.69E-46 |
MS.gene057121 | MS.gene27272 | 0.86362 | 2.19E-64 | -1.69E-46 |
MS.gene057439 | MS.gene27272 | 0.824867 | 6.40E-54 | -1.69E-46 |
MS.gene058002 | MS.gene27272 | 0.852133 | 5.64E-61 | -1.69E-46 |
MS.gene05811 | MS.gene27272 | 0.838461 | 2.84E-57 | -1.69E-46 |
MS.gene058142 | MS.gene27272 | 0.900408 | 7.55E-78 | -1.69E-46 |
MS.gene058233 | MS.gene27272 | 0.809977 | 1.45E-50 | -1.69E-46 |
MS.gene058276 | MS.gene27272 | 0.890483 | 9.46E-74 | -1.69E-46 |
MS.gene058743 | MS.gene27272 | 0.845705 | 3.44E-59 | -1.69E-46 |
MS.gene058749 | MS.gene27272 | 0.800989 | 1.11E-48 | -1.69E-46 |
MS.gene058833 | MS.gene27272 | 0.845511 | 3.88E-59 | -1.69E-46 |
MS.gene05907 | MS.gene27272 | 0.822397 | 2.42E-53 | -1.69E-46 |
MS.gene059247 | MS.gene27272 | 0.815248 | 1.02E-51 | -1.69E-46 |
MS.gene059597 | MS.gene27272 | 0.807923 | 3.99E-50 | -1.69E-46 |
MS.gene05984 | MS.gene27272 | 0.848749 | 5.03E-60 | -1.69E-46 |
MS.gene059894 | MS.gene27272 | 0.858083 | 1.05E-62 | -1.69E-46 |
MS.gene059899 | MS.gene27272 | 0.838623 | 2.58E-57 | -1.69E-46 |
MS.gene060083 | MS.gene27272 | 0.842075 | 3.23E-58 | -1.69E-46 |
MS.gene060407 | MS.gene27272 | 0.867028 | 1.85E-65 | -1.69E-46 |
MS.gene06090 | MS.gene27272 | 0.808918 | 2.45E-50 | -1.69E-46 |
MS.gene061049 | MS.gene27272 | 0.837499 | 5.01E-57 | -1.69E-46 |
MS.gene061159 | MS.gene27272 | 0.821885 | 3.18E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27272.t1 | MTR_1g023160 | 97.003 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 0.0 | 719 |
MS.gene27272.t1 | MTR_2g019790 | 36.491 | 285 | 154 | 5 | 7 | 290 | 203 | 461 | 1.43e-52 | 184 |
MS.gene27272.t1 | MTR_1g073010 | 40.845 | 213 | 104 | 5 | 73 | 271 | 250 | 454 | 1.83e-39 | 147 |
MS.gene27272.t1 | MTR_2g030370 | 32.117 | 137 | 74 | 2 | 143 | 260 | 27 | 163 | 4.50e-16 | 79.3 |
MS.gene27272.t1 | MTR_2g030335 | 34.653 | 101 | 57 | 1 | 143 | 234 | 27 | 127 | 1.55e-12 | 66.6 |
MS.gene27272.t1 | MTR_3g094880 | 37.069 | 116 | 59 | 3 | 141 | 254 | 65 | 168 | 8.53e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27272.t1 | AT5G18570 | 50.296 | 169 | 76 | 2 | 120 | 288 | 358 | 518 | 6.92e-48 | 172 |
MS.gene27272.t1 | AT1G07615 | 39.224 | 232 | 115 | 4 | 73 | 286 | 225 | 448 | 1.10e-38 | 144 |
MS.gene27272.t1 | AT1G30580 | 33.088 | 136 | 72 | 3 | 143 | 259 | 27 | 162 | 5.95e-16 | 79.0 |
MS.gene27272.t1 | AT1G56050 | 36.111 | 108 | 59 | 3 | 144 | 241 | 57 | 164 | 1.21e-12 | 69.3 |
MS.gene27272.t1 | AT4G39520 | 36.842 | 114 | 58 | 3 | 143 | 254 | 68 | 169 | 1.67e-11 | 65.5 |
Find 98 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGGCATTAATGTTGTAAA+TGG | 0.168245 | 1.1:+1505721 | None:intergenic |
CCACGACCTCACTCTGTTAT+TGG | 0.196696 | 1.1:-1504104 | MS.gene27272:CDS |
CCAAATCTTGGACGCCTTAA+TGG | 0.205270 | 1.1:-1505703 | MS.gene27272:CDS |
GTTCGTATTCCTGTTCCTTT+AGG | 0.240911 | 1.1:-1509204 | MS.gene27272:intron |
ACAGTTCTGTAGTCATTTAC+AGG | 0.252618 | 1.1:+1505420 | None:intergenic |
AGGAGATAAGGGCCGCTTTA+AGG | 0.264646 | 1.1:-1503880 | MS.gene27272:CDS |
TAGAAATGCCACGGCATAAT+AGG | 0.302506 | 1.1:-1506898 | MS.gene27272:CDS |
AAATGGATAATCAGCAATAT+CGG | 0.307095 | 1.1:+1505738 | None:intergenic |
CCATTAAGGCGTCCAAGATT+TGG | 0.315935 | 1.1:+1505703 | None:intergenic |
ACTCAAGAAATTATGAGAAT+TGG | 0.328796 | 1.1:-1504227 | MS.gene27272:CDS |
GAAACTTCAGAGCTTGGTTT+TGG | 0.342930 | 1.1:+1504182 | None:intergenic |
AGCGTTGATTTCCCAGCATT+TGG | 0.349531 | 1.1:+1505787 | None:intergenic |
CCAAGTTGGGATCACCATTA+AGG | 0.355460 | 1.1:+1505689 | None:intergenic |
ACAACATTAATGCCAAATCT+TGG | 0.357348 | 1.1:-1505715 | MS.gene27272:CDS |
TGCTGGGAAATCAACGCTTC+TGG | 0.366085 | 1.1:-1505782 | MS.gene27272:CDS |
TGAAGGAAAAGATACGTTAT+TGG | 0.376575 | 1.1:-1509328 | MS.gene27272:CDS |
AAAACCAAGCTCTGAAGTTT+CGG | 0.377456 | 1.1:-1504180 | MS.gene27272:CDS |
CATGGTTAGCGAGATGTTAA+AGG | 0.379680 | 1.1:-1503900 | MS.gene27272:CDS |
GATTTGCCTGGTCTTATAGA+AGG | 0.401210 | 1.1:-1505631 | MS.gene27272:CDS |
TGGAGTTTCATAGTAAGAAT+AGG | 0.401600 | 1.1:-1509308 | MS.gene27272:CDS |
CACAGTTGTGAAAAGCAAAC+GGG | 0.420716 | 1.1:-1507335 | MS.gene27272:CDS |
TACATCCCTGCTCCCAAGTT+GGG | 0.426129 | 1.1:+1505676 | None:intergenic |
ACTAGAAACCAACGGTTCCT+TGG | 0.430294 | 1.1:+1503844 | None:intergenic |
TATGGTCGTTCAAGGTAATC+AGG | 0.432822 | 1.1:+1504602 | None:intergenic |
TTGTAGGGACTTCCAAATGC+TGG | 0.444567 | 1.1:-1505799 | MS.gene27272:intron |
CCTTAATGGTGATCCCAACT+TGG | 0.455439 | 1.1:-1505689 | MS.gene27272:CDS |
CGAGATGTTAAAGGAGATAA+GGG | 0.460007 | 1.1:-1503891 | MS.gene27272:CDS |
GCAAACAAACCTAAAGGAAC+AGG | 0.461494 | 1.1:+1509195 | None:intergenic |
GGTGATCCCAACTTGGGAGC+AGG | 0.464311 | 1.1:-1505682 | MS.gene27272:CDS |
TCTTATAGAAGGTGCTCACT+TGG | 0.464858 | 1.1:-1505620 | MS.gene27272:CDS |
CAACAATGTATGGTCGTTCA+AGG | 0.466565 | 1.1:+1504594 | None:intergenic |
TGAGCCGAAACTTCAGAGCT+TGG | 0.472376 | 1.1:+1504176 | None:intergenic |
GCTACATTGGCAGATTTGCC+TGG | 0.472873 | 1.1:-1505643 | MS.gene27272:CDS |
TCTAAGAAGGACCCGGCTAC+TGG | 0.473999 | 1.1:-1505472 | MS.gene27272:CDS |
ATCGGGTTTCGCAAGCGTAA+TGG | 0.482247 | 1.1:+1505756 | None:intergenic |
GCACAGTTGTGAAAAGCAAA+CGG | 0.484997 | 1.1:-1507336 | MS.gene27272:CDS |
GATGAGAGATGACTCGGATA+AGG | 0.486698 | 1.1:-1506846 | MS.gene27272:intron |
AACAACATGGACCAGTAGCC+GGG | 0.486773 | 1.1:+1505461 | None:intergenic |
TTATTCAAAACAACAATGTA+TGG | 0.487346 | 1.1:+1504584 | None:intergenic |
GCGAGATGTTAAAGGAGATA+AGG | 0.492991 | 1.1:-1503892 | MS.gene27272:CDS |
ATAATTTCTTGAGTCAATGT+TGG | 0.494238 | 1.1:+1504236 | None:intergenic |
CGCAACAAGAACTTCATCAC+CGG | 0.498936 | 1.1:+1507285 | None:intergenic |
ACCTGGGGAGGAAGTTAAGT+TGG | 0.499431 | 1.1:-1506257 | MS.gene27272:CDS |
TTTACTTCTTACTTGAGGAA+TGG | 0.500469 | 1.1:-1509243 | MS.gene27272:CDS |
AAGGCAGTGCGTTGATTCCA+AGG | 0.513530 | 1.1:-1503861 | MS.gene27272:CDS |
CGTTGATTCCAAGGAACCGT+TGG | 0.514117 | 1.1:-1503852 | MS.gene27272:CDS |
GTGATTATTTATGCTGATGA+AGG | 0.516366 | 1.1:-1509345 | MS.gene27272:CDS |
GTTGCGAGGGGTGGACAAGG+AGG | 0.518059 | 1.1:-1507268 | MS.gene27272:CDS |
TTGCGAGGGGTGGACAAGGA+GGG | 0.520295 | 1.1:-1507267 | MS.gene27272:CDS |
AATGGATAATCAGCAATATC+GGG | 0.521649 | 1.1:+1505739 | None:intergenic |
ATACTTCCAATGGGTGGTCA+TGG | 0.522317 | 1.1:-1509375 | None:intergenic |
GTGATGAAGTTCTTGTTGCG+AGG | 0.528670 | 1.1:-1507282 | MS.gene27272:CDS |
CAGTTCTGTAGTCATTTACA+GGG | 0.534642 | 1.1:+1505421 | None:intergenic |
GTGATCCCAACTTGGGAGCA+GGG | 0.543301 | 1.1:-1505681 | MS.gene27272:CDS |
TTTGGTTCATGGTCAACCTG+GGG | 0.544159 | 1.1:-1506272 | MS.gene27272:CDS |
ATACATCCCTGCTCCCAAGT+TGG | 0.545507 | 1.1:+1505675 | None:intergenic |
TGTAGGGACTTCCAAATGCT+GGG | 0.545787 | 1.1:-1505798 | MS.gene27272:intron |
TTATTGCAGAAAGCGTATCA+TGG | 0.546103 | 1.1:-1503918 | MS.gene27272:intron |
CAACAACATGGACCAGTAGC+CGG | 0.547834 | 1.1:+1505460 | None:intergenic |
TGCGAGGGGTGGACAAGGAG+GGG | 0.550722 | 1.1:-1507266 | MS.gene27272:intron |
CCAATAACAGAGTGAGGTCG+TGG | 0.551059 | 1.1:+1504104 | None:intergenic |
TCCAACTTAACTTCCTCCCC+AGG | 0.554908 | 1.1:+1506256 | None:intergenic |
CTTGTTGCGAGGGGTGGACA+AGG | 0.554974 | 1.1:-1507271 | MS.gene27272:CDS |
TGATGAAGTTCTTGTTGCGA+GGG | 0.555435 | 1.1:-1507281 | MS.gene27272:CDS |
CTTATAGAAGGTGCTCACTT+GGG | 0.556651 | 1.1:-1505619 | MS.gene27272:CDS |
CTTAATGGTGATCCCAACTT+GGG | 0.563698 | 1.1:-1505688 | MS.gene27272:CDS |
CAGTAGATGCGTCAACAACA+TGG | 0.566647 | 1.1:+1505448 | None:intergenic |
TCACCACCATGACCACCCAT+TGG | 0.575301 | 1.1:+1509369 | None:intergenic |
GGAACAGGAATACGAACAGT+AGG | 0.577522 | 1.1:+1509210 | None:intergenic |
CTACGAGTTGTAGCCGACGT+TGG | 0.577677 | 1.1:-1506226 | MS.gene27272:CDS |
GTATTCGTCTGAAGCTACAT+TGG | 0.579587 | 1.1:-1505656 | MS.gene27272:CDS |
ATTATGAGAATTGGCAGCGA+TGG | 0.582383 | 1.1:-1504218 | MS.gene27272:CDS |
GGTTCATGGTCAACCTGGGG+AGG | 0.582643 | 1.1:-1506269 | MS.gene27272:CDS |
GACTGAAGAAAGTGACCCAA+AGG | 0.583497 | 1.1:-1504147 | MS.gene27272:CDS |
TGAGGCATCTAAGAAGGACC+CGG | 0.584490 | 1.1:-1505479 | MS.gene27272:CDS |
GGTGGTAATGTTGATGCTGT+TGG | 0.588083 | 1.1:-1509270 | MS.gene27272:CDS |
GAAGTTCTTGTTGCGAGGGG+TGG | 0.596690 | 1.1:-1507277 | MS.gene27272:CDS |
GGAAACTACATACCTCTGGC+AGG | 0.603249 | 1.1:+1504555 | None:intergenic |
AGAAGGTGCTCACTTGGGAA+AGG | 0.609931 | 1.1:-1505614 | MS.gene27272:intron |
TCTTTGATACTTCCAATGGG+TGG | 0.614114 | 1.1:-1509381 | None:intergenic |
TTAGCTGATTTAGCACGACC+CGG | 0.616899 | 1.1:-1507304 | MS.gene27272:CDS |
TTAGCTTGTTAGAAATGCCA+CGG | 0.620564 | 1.1:-1506907 | MS.gene27272:CDS |
CTTCCAATGGGTGGTCATGG+TGG | 0.633367 | 1.1:-1509372 | None:intergenic |
TGAGCACCTTCTATAAGACC+AGG | 0.641306 | 1.1:+1505625 | None:intergenic |
ATCAACGCACTGCCTTAAAG+CGG | 0.642286 | 1.1:+1503868 | None:intergenic |
TAACGTGATGAGAGATGACT+CGG | 0.642615 | 1.1:-1506852 | MS.gene27272:CDS |
GCAACAAGAACTTCATCACC+GGG | 0.643404 | 1.1:+1507286 | None:intergenic |
GAATAAGATTGACCTGCCAG+AGG | 0.647898 | 1.1:-1504567 | MS.gene27272:intron |
AGGTTTAATGCGAAACGTGG+TGG | 0.659737 | 1.1:-1509288 | MS.gene27272:CDS |
CAACGTCGGCTACAACTCGT+AGG | 0.664807 | 1.1:+1506227 | None:intergenic |
CTAACTCCAATAACAGAGTG+AGG | 0.666857 | 1.1:+1504098 | None:intergenic |
AATAGGTTTAATGCGAAACG+TGG | 0.677121 | 1.1:-1509291 | MS.gene27272:CDS |
ACTTACAATTAAACCAACGT+CGG | 0.682305 | 1.1:+1506213 | None:intergenic |
TGTGGCACACTAGAAACCAA+CGG | 0.704503 | 1.1:+1503836 | None:intergenic |
GATGAAGTTCTTGTTGCGAG+GGG | 0.705915 | 1.1:-1507280 | MS.gene27272:CDS |
ACAGTTGTGAAAAGCAAACG+GGG | 0.706082 | 1.1:-1507334 | MS.gene27272:CDS |
CCCAAAGGAAAAGAAACTTG+AGG | 0.715840 | 1.1:-1504132 | MS.gene27272:CDS |
ATAGGATGCAAATCTCACTG+TGG | 0.804712 | 1.1:+1503818 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTATTTTTTATATT+TGG | - | chr1.1:1504580-1504599 | MS.gene27272:CDS | 0.0% |
!!! | AAACAATTTTATTGTTTTAA+AGG | - | chr1.1:1504344-1504363 | MS.gene27272:intron | 10.0% |
!!! | AACAATTTTATTGTTTTAAA+GGG | - | chr1.1:1504345-1504364 | MS.gene27272:intron | 10.0% |
!!! | ATTTTTTTTTTAATCTTTCA+GGG | - | chr1.1:1507679-1507698 | MS.gene27272:intron | 10.0% |
!!! | TTTAAAACAATAAAATTGTT+TGG | + | chr1.1:1504345-1504364 | None:intergenic | 10.0% |
!! | AAACTTGATTAAAAATTCAA+CGG | + | chr1.1:1508272-1508291 | None:intergenic | 15.0% |
!! | AAGAAGAAAACTTAAATAAT+TGG | - | chr1.1:1504273-1504292 | MS.gene27272:intron | 15.0% |
!! | AATAATATCATATAAGATGT+TGG | + | chr1.1:1504995-1505014 | None:intergenic | 15.0% |
!! | AGCCAAATAATATATTAATA+GGG | + | chr1.1:1504319-1504338 | None:intergenic | 15.0% |
!! | ATAAATAAATTCATACTCAT+TGG | - | chr1.1:1506115-1506134 | MS.gene27272:intron | 15.0% |
!! | ATTATGTTTGATTAATTGAT+TGG | - | chr1.1:1504756-1504775 | MS.gene27272:intron | 15.0% |
!! | TACCCTATTAATATATTATT+TGG | - | chr1.1:1504314-1504333 | MS.gene27272:intron | 15.0% |
!! | TAGCCAAATAATATATTAAT+AGG | + | chr1.1:1504320-1504339 | None:intergenic | 15.0% |
!! | TTGCTTCTTAAAAAAAATAA+TGG | + | chr1.1:1507908-1507927 | None:intergenic | 15.0% |
!!! | AAATCAAGTTTAGTTTTTTA+TGG | + | chr1.1:1505811-1505830 | None:intergenic | 15.0% |
!!! | AATCAAGTTTAGTTTTTTAT+GGG | + | chr1.1:1505810-1505829 | None:intergenic | 15.0% |
!!! | AATGTTGTTATGTTTTTATT+AGG | - | chr1.1:1504721-1504740 | MS.gene27272:intron | 15.0% |
!!! | AATTTCATTTTTTGATGTTA+TGG | - | chr1.1:1504027-1504046 | MS.gene27272:intron | 15.0% |
!!! | AATTTCCTATTATTTTGTAA+AGG | - | chr1.1:1508703-1508722 | MS.gene27272:intron | 15.0% |
!!! | ATGTTGTTATGTTTTTATTA+GGG | - | chr1.1:1504722-1504741 | MS.gene27272:intron | 15.0% |
!!! | ATTTCCTATTATTTTGTAAA+GGG | - | chr1.1:1508704-1508723 | MS.gene27272:intron | 15.0% |
!!! | ATTTTTTAACTTCATATCAA+TGG | + | chr1.1:1508199-1508218 | None:intergenic | 15.0% |
!!! | GATTTTTTTTTTAATCTTTC+AGG | - | chr1.1:1507678-1507697 | MS.gene27272:intron | 15.0% |
!!! | GTCTAAATCTTTTTTTAATA+TGG | - | chr1.1:1507250-1507269 | MS.gene27272:intron | 15.0% |
!!! | TGTTCATTAATTTTAATTTC+AGG | - | chr1.1:1508925-1508944 | MS.gene27272:intron | 15.0% |
!!! | TTATATTAGTTGACTTTTTT+TGG | + | chr1.1:1505269-1505288 | None:intergenic | 15.0% |
!! | AAACTCAAAATTATCATCAT+TGG | + | chr1.1:1507122-1507141 | None:intergenic | 20.0% |
!! | AGTTTATTATTGTGAATTAC+AGG | - | chr1.1:1505840-1505859 | MS.gene27272:intron | 20.0% |
!! | ATATTTAATAAGCAGCTATA+TGG | + | chr1.1:1507658-1507677 | None:intergenic | 20.0% |
!! | ATGCAATCTATAAGATTATT+CGG | + | chr1.1:1508098-1508117 | None:intergenic | 20.0% |
!! | CATATTACAAGATAGTAATA+CGG | + | chr1.1:1508880-1508899 | None:intergenic | 20.0% |
!! | TAAATTATCAGAGCTAATAA+AGG | + | chr1.1:1508334-1508353 | None:intergenic | 20.0% |
!! | TTAATATGGTGAACTAAAAT+TGG | - | chr1.1:1507264-1507283 | MS.gene27272:intron | 20.0% |
!! | TTATTCAAAACAACAATGTA+TGG | + | chr1.1:1508617-1508636 | None:intergenic | 20.0% |
!! | TTTATTCGTAAGTACAAAAA+TGG | + | chr1.1:1505101-1505120 | None:intergenic | 20.0% |
!!! | AAAAAATAATGGAGTCTATA+AGG | + | chr1.1:1507897-1507916 | None:intergenic | 20.0% |
!!! | AAAAATAATGGAGTCTATAA+GGG | + | chr1.1:1507896-1507915 | None:intergenic | 20.0% |
!!! | AAGATACATTTTAAAATGAC+AGG | + | chr1.1:1506778-1506797 | None:intergenic | 20.0% |
!!! | ATGATAATTTTGAGTTTTCT+GGG | - | chr1.1:1507125-1507144 | MS.gene27272:intron | 20.0% |
!!! | ATGTCTTTTCATATTTTAAC+TGG | - | chr1.1:1505413-1505432 | MS.gene27272:CDS | 20.0% |
!!! | ATTTCATATTCAGTTTTATC+AGG | - | chr1.1:1506632-1506651 | MS.gene27272:intron | 20.0% |
!!! | CTGTAACAATTTTAAAATAC+AGG | + | chr1.1:1506904-1506923 | None:intergenic | 20.0% |
!!! | CTGTATTTTAAAATTGTTAC+AGG | - | chr1.1:1506902-1506921 | MS.gene27272:CDS | 20.0% |
!!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1.1:1506754-1506773 | None:intergenic | 20.0% |
!!! | TTAAGTTTTCTTCTTCTTTT+GGG | + | chr1.1:1504268-1504287 | None:intergenic | 20.0% |
!!! | TTAATTTTAATTTCAGGTTG+AGG | - | chr1.1:1508931-1508950 | MS.gene27272:intron | 20.0% |
!!! | TTTAAAATTGTTACAGGTTT+TGG | - | chr1.1:1506908-1506927 | MS.gene27272:CDS | 20.0% |
!!! | TTTAAGTTTTCTTCTTCTTT+TGG | + | chr1.1:1504269-1504288 | None:intergenic | 20.0% |
!!! | TTTAGATTCAAGTTTTTTCT+TGG | - | chr1.1:1507830-1507849 | MS.gene27272:intron | 20.0% |
! | AAAGTGAAATATCCCTTTAA+AGG | + | chr1.1:1508152-1508171 | None:intergenic | 25.0% |
! | AAATGGATAATCAGCAATAT+CGG | + | chr1.1:1507463-1507482 | None:intergenic | 25.0% |
! | AAATTTGCAAACAAACCTAA+AGG | + | chr1.1:1504012-1504031 | None:intergenic | 25.0% |
! | AACAAACAGAGAACTAAATA+AGG | + | chr1.1:1507030-1507049 | None:intergenic | 25.0% |
! | AATTTCACTTGGACAAAAAA+AGG | + | chr1.1:1507297-1507316 | None:intergenic | 25.0% |
! | ACAAAATTACTAACCATACA+TGG | + | chr1.1:1505646-1505665 | None:intergenic | 25.0% |
! | ACAACAATAATAACCAAGAT+AGG | + | chr1.1:1506232-1506251 | None:intergenic | 25.0% |
! | ACTCAAGAAATTATGAGAAT+TGG | - | chr1.1:1508971-1508990 | MS.gene27272:intron | 25.0% |
! | ATAATTTCTTGAGTCAATGT+TGG | + | chr1.1:1508965-1508984 | None:intergenic | 25.0% |
! | ATCTTCATAATAAATAACCG+TGG | - | chr1.1:1507060-1507079 | MS.gene27272:intron | 25.0% |
! | ATGTGGATAAGATTAGAATA+AGG | - | chr1.1:1505073-1505092 | MS.gene27272:intron | 25.0% |
! | ATTAAAAACTCCAAAACATG+AGG | + | chr1.1:1508524-1508543 | None:intergenic | 25.0% |
! | ATTGTGCATAAAGTAATTTG+TGG | - | chr1.1:1508478-1508497 | MS.gene27272:intron | 25.0% |
! | ATTTCACTTGGACAAAAAAA+GGG | + | chr1.1:1507296-1507315 | None:intergenic | 25.0% |
! | CACAATAATAAACTCAATGA+GGG | + | chr1.1:1505834-1505853 | None:intergenic | 25.0% |
! | CAGAAAATGAAATGAAAACA+AGG | + | chr1.1:1505736-1505755 | None:intergenic | 25.0% |
! | GAAATTTGGTTGAACAATTA+TGG | + | chr1.1:1506541-1506560 | None:intergenic | 25.0% |
! | GATATATAGACTGTCTAAAT+CGG | + | chr1.1:1504662-1504681 | None:intergenic | 25.0% |
! | GATTTACATTGTAATGTTAG+AGG | - | chr1.1:1504810-1504829 | MS.gene27272:intron | 25.0% |
! | GTAAGATAGAATTTAACTGA+TGG | + | chr1.1:1505615-1505634 | None:intergenic | 25.0% |
! | TAAATTCTATCTTACCACTT+TGG | - | chr1.1:1505620-1505639 | MS.gene27272:CDS | 25.0% |
! | TCACAATAATAAACTCAATG+AGG | + | chr1.1:1505835-1505854 | None:intergenic | 25.0% |
! | TGTTCAAAAACTATTGTTTC+TGG | + | chr1.1:1506679-1506698 | None:intergenic | 25.0% |
! | TTAAAAACTCCAAAACATGA+GGG | + | chr1.1:1508523-1508542 | None:intergenic | 25.0% |
! | TTACATTAAGATAGGAACAA+AGG | + | chr1.1:1506746-1506765 | None:intergenic | 25.0% |
! | TTATAAGTTCTTCCAATTAG+TGG | - | chr1.1:1504175-1504194 | MS.gene27272:CDS | 25.0% |
! | TTTGGCATTAATGTTGTAAA+TGG | + | chr1.1:1507480-1507499 | None:intergenic | 25.0% |
!! | ATGAAGTTAATCTTGTTGTA+GGG | - | chr1.1:1507384-1507403 | MS.gene27272:intron | 25.0% |
!! | GTTTAGTTTAGTGTCAATTA+TGG | - | chr1.1:1504397-1504416 | MS.gene27272:intron | 25.0% |
!! | TAAGTTTTCTTCTTCTTTTG+GGG | + | chr1.1:1504267-1504286 | None:intergenic | 25.0% |
!! | TGACAAATTAGCAAGTATTT+TGG | + | chr1.1:1506567-1506586 | None:intergenic | 25.0% |
!!! | AAGCTATTTTTGATAACTTG+TGG | - | chr1.1:1504104-1504123 | MS.gene27272:CDS | 25.0% |
!!! | AAGTATTTTGGACAGAAATT+TGG | + | chr1.1:1506555-1506574 | None:intergenic | 25.0% |
!!! | AAGTTTTTTCTTGGTTTAAC+AGG | - | chr1.1:1507839-1507858 | MS.gene27272:intron | 25.0% |
!!! | ACATAATAAGTACTGAAAAG+TGG | + | chr1.1:1505218-1505237 | None:intergenic | 25.0% |
!!! | AGTTTTAAAAACATTGGTCA+TGG | - | chr1.1:1505452-1505471 | MS.gene27272:CDS | 25.0% |
!!! | ATAATAAGTACTGAAAAGTG+GGG | + | chr1.1:1505216-1505235 | None:intergenic | 25.0% |
!!! | CAATGTTTTAAAAACTGAAC+TGG | - | chr1.1:1505298-1505317 | MS.gene27272:intron | 25.0% |
!!! | CATAATAAGTACTGAAAAGT+GGG | + | chr1.1:1505217-1505236 | None:intergenic | 25.0% |
!!! | GATGATAATTTTGAGTTTTC+TGG | - | chr1.1:1507124-1507143 | MS.gene27272:intron | 25.0% |
!!! | TTTTTGATAACTTGTGGTTT+TGG | - | chr1.1:1504110-1504129 | MS.gene27272:CDS | 25.0% |
AAAAGACATTGTTCACGATT+CGG | + | chr1.1:1505402-1505421 | None:intergenic | 30.0% | |
AAGAACAAACAGGAAATTTG+TGG | + | chr1.1:1508380-1508399 | None:intergenic | 30.0% | |
AATCCAAAAGCAAAAGAAAG+AGG | + | chr1.1:1508411-1508430 | None:intergenic | 30.0% | |
AATGGATAATCAGCAATATC+GGG | + | chr1.1:1507462-1507481 | None:intergenic | 30.0% | |
AATTTGTGGCTATCAATAGA+TGG | + | chr1.1:1508366-1508385 | None:intergenic | 30.0% | |
ACAACATTAATGCCAAATCT+TGG | - | chr1.1:1507483-1507502 | MS.gene27272:intron | 30.0% | |
ACTTACAATTAAACCAACGT+CGG | + | chr1.1:1506988-1507007 | None:intergenic | 30.0% | |
AGTATAGCTTAGATGGTAAA+AGG | - | chr1.1:1505143-1505162 | MS.gene27272:intron | 30.0% | |
ATATACTCAAACTCAGATTG+AGG | + | chr1.1:1508678-1508697 | None:intergenic | 30.0% | |
ATCAACATTATCTTCTTTCC+TGG | - | chr1.1:1506184-1506203 | MS.gene27272:intron | 30.0% | |
ATTGAAGGATTGAATCAACA+AGG | - | chr1.1:1506465-1506484 | MS.gene27272:intron | 30.0% | |
CACAATCTTCACTAAAATCA+TGG | + | chr1.1:1507171-1507190 | None:intergenic | 30.0% | |
CAGCTATATGGTTTAAAAGA+TGG | + | chr1.1:1507646-1507665 | None:intergenic | 30.0% | |
CATTGTAATGTTAGAGGATT+TGG | - | chr1.1:1504816-1504835 | MS.gene27272:intron | 30.0% | |
GAAGCAATTTATTCACGAAA+TGG | + | chr1.1:1505677-1505696 | None:intergenic | 30.0% | |
GGAAAGAATAAAGAACAAAC+AGG | + | chr1.1:1508390-1508409 | None:intergenic | 30.0% | |
GTGATTATTTATGCTGATGA+AGG | - | chr1.1:1503853-1503872 | MS.gene27272:CDS | 30.0% | |
TAAGTTGTACAGATTCACAT+TGG | - | chr1.1:1506059-1506078 | MS.gene27272:intron | 30.0% | |
TACAAGATAGTAATACGGAA+GGG | + | chr1.1:1508875-1508894 | None:intergenic | 30.0% | |
TACCATCTAAGCTATACTTA+CGG | + | chr1.1:1505141-1505160 | None:intergenic | 30.0% | |
TATACTCAAACTCAGATTGA+GGG | + | chr1.1:1508677-1508696 | None:intergenic | 30.0% | |
TCTCTCAGTTCAATTAATGT+TGG | - | chr1.1:1506500-1506519 | MS.gene27272:intron | 30.0% | |
TGAAGGAAAAGATACGTTAT+TGG | - | chr1.1:1503870-1503889 | MS.gene27272:CDS | 30.0% | |
TGGAGTTTCATAGTAAGAAT+AGG | - | chr1.1:1503890-1503909 | MS.gene27272:CDS | 30.0% | |
TGTGAAATGAAATGCTATGA+AGG | + | chr1.1:1509181-1509200 | None:intergenic | 30.0% | |
TTACAAGATAGTAATACGGA+AGG | + | chr1.1:1508876-1508895 | None:intergenic | 30.0% | |
TTTACTTCTTACTTGAGGAA+TGG | - | chr1.1:1503955-1503974 | MS.gene27272:intron | 30.0% | |
TTTGAAAAGCAGTATAAGCA+TGG | + | chr1.1:1505337-1505356 | None:intergenic | 30.0% | |
! | GATGAAGTTAATCTTGTTGT+AGG | - | chr1.1:1507383-1507402 | MS.gene27272:intron | 30.0% |
! | TCATTCTAATTCTGTTTTGC+AGG | - | chr1.1:1508556-1508575 | MS.gene27272:intron | 30.0% |
! | TTATCATTTCCCTCATGTTT+TGG | - | chr1.1:1508511-1508530 | MS.gene27272:intron | 30.0% |
! | TTTCCTCTTTCTTTTGCTTT+TGG | - | chr1.1:1508405-1508424 | MS.gene27272:intron | 30.0% |
! | TTTTTAATCTTTCAGGGTCT+TGG | - | chr1.1:1507685-1507704 | MS.gene27272:intron | 30.0% |
!! | AAAGGGATATTTCACTTTTG+AGG | - | chr1.1:1508154-1508173 | MS.gene27272:intron | 30.0% |
!! | GATTTTAGTGAAGATTGTGA+AGG | - | chr1.1:1507172-1507191 | MS.gene27272:intron | 30.0% |
!! | GTGTTTTTACTTCTTACTTG+AGG | - | chr1.1:1503950-1503969 | MS.gene27272:intron | 30.0% |
!! | TAATAAGTACTGAAAAGTGG+GGG | + | chr1.1:1505215-1505234 | None:intergenic | 30.0% |
!! | TCAAGTGTGTCACTTAATAT+GGG | + | chr1.1:1504862-1504881 | None:intergenic | 30.0% |
!! | TCCTATTATTTTGTAAAGGG+AGG | - | chr1.1:1508707-1508726 | MS.gene27272:intron | 30.0% |
!!! | ATTTTTTGAGGCATCTAAGA+AGG | - | chr1.1:1507713-1507732 | MS.gene27272:intron | 30.0% |
!!! | GACCAATGTTTTTAAAACTG+AGG | + | chr1.1:1505451-1505470 | None:intergenic | 30.0% |
!!! | GTTTTTGAGTTCATCATAGT+TGG | - | chr1.1:1504781-1504800 | MS.gene27272:intron | 30.0% |
!!! | TGCCTCAGTTTTAAAAACAT+TGG | - | chr1.1:1505446-1505465 | MS.gene27272:CDS | 30.0% |
AACAGGTTTACTTGAAGTTG+TGG | - | chr1.1:1507856-1507875 | MS.gene27272:intron | 35.0% | |
AACCACAACTAATACTTTCC+AGG | + | chr1.1:1506205-1506224 | None:intergenic | 35.0% | |
AATAGGTTTAATGCGAAACG+TGG | - | chr1.1:1503907-1503926 | MS.gene27272:CDS | 35.0% | |
ACAGGTTTACTTGAAGTTGT+GGG | - | chr1.1:1507857-1507876 | MS.gene27272:intron | 35.0% | |
ACAGTTCTGTAGTCATTTAC+AGG | + | chr1.1:1507781-1507800 | None:intergenic | 35.0% | |
ACATGAGGGAAATGATAAGT+TGG | + | chr1.1:1508509-1508528 | None:intergenic | 35.0% | |
ACCATCTAAGCTATACTTAC+GGG | + | chr1.1:1505140-1505159 | None:intergenic | 35.0% | |
ACTTCATATCAATGGTTGAG+AGG | + | chr1.1:1508191-1508210 | None:intergenic | 35.0% | |
ATACATTTAGCCCCTGAAAT+GGG | - | chr1.1:1508774-1508793 | MS.gene27272:intron | 35.0% | |
ATCATAGTTCCAGAGAGATT+TGG | + | chr1.1:1506600-1506619 | None:intergenic | 35.0% | |
ATTAATTGAACTGAGAGAGC+AGG | + | chr1.1:1506498-1506517 | None:intergenic | 35.0% | |
CAGTTCTGTAGTCATTTACA+GGG | + | chr1.1:1507780-1507799 | None:intergenic | 35.0% | |
CATTGTACTCCATTCTATGT+TGG | - | chr1.1:1505048-1505067 | MS.gene27272:intron | 35.0% | |
CCATCATTAGAGACTTCATT+AGG | - | chr1.1:1506437-1506456 | MS.gene27272:intron | 35.0% | |
CCTAATGAAGTCTCTAATGA+TGG | + | chr1.1:1506440-1506459 | None:intergenic | 35.0% | |
CGAGATGTTAAAGGAGATAA+GGG | - | chr1.1:1509307-1509326 | MS.gene27272:CDS | 35.0% | |
CGGCAAACATTATGTATACA+TGG | + | chr1.1:1508252-1508271 | None:intergenic | 35.0% | |
CTAGTGTAAAGTAGATGTCA+CGG | - | chr1.1:1506710-1506729 | MS.gene27272:intron | 35.0% | |
CTTCATTAGGCATGTATTGA+AGG | - | chr1.1:1506450-1506469 | MS.gene27272:intron | 35.0% | |
GAATCTGTACAACTTACCTA+CGG | + | chr1.1:1506055-1506074 | None:intergenic | 35.0% | |
GCATTTCTAACAAGCTAATC+TGG | + | chr1.1:1506289-1506308 | None:intergenic | 35.0% | |
GCCTCCCTTTACAAAATAAT+AGG | + | chr1.1:1508711-1508730 | None:intergenic | 35.0% | |
GGTAATGTACTCTGTAACTA+AGG | - | chr1.1:1506136-1506155 | MS.gene27272:intron | 35.0% | |
TCCACATTTCCAACATAGAA+TGG | + | chr1.1:1505060-1505079 | None:intergenic | 35.0% | |
TCCATTCTATGTTGGAAATG+TGG | - | chr1.1:1505056-1505075 | MS.gene27272:intron | 35.0% | |
TTTGTCCAAGTGAAATTCGT+TGG | - | chr1.1:1507300-1507319 | MS.gene27272:CDS | 35.0% | |
! | ATGGCTCTGTTTGGATATAT+AGG | - | chr1.1:1504046-1504065 | MS.gene27272:intron | 35.0% |
! | CCTCAAGTTTCTTTTCCTTT+GGG | + | chr1.1:1509069-1509088 | None:intergenic | 35.0% |
! | GCTTTTCAAATGCTAGAATC+CGG | - | chr1.1:1505347-1505366 | MS.gene27272:intron | 35.0% |
! | GGGAATTTGGTTCCTTTAAA+GGG | - | chr1.1:1508137-1508156 | MS.gene27272:intron | 35.0% |
! | TACTTTTCATAGTACCCAGT+CGG | - | chr1.1:1509233-1509252 | MS.gene27272:CDS | 35.0% |
! | TATTTCTGTCCAAATCTCTC+TGG | - | chr1.1:1506588-1506607 | MS.gene27272:intron | 35.0% |
! | TCCTCAAGTTTCTTTTCCTT+TGG | + | chr1.1:1509070-1509089 | None:intergenic | 35.0% |
! | TGGCTCTGTTTGGATATATA+GGG | - | chr1.1:1504047-1504066 | MS.gene27272:intron | 35.0% |
! | TTATTGCAGAAAGCGTATCA+TGG | - | chr1.1:1509280-1509299 | MS.gene27272:CDS | 35.0% |
! | TTTAAGACTAATCTAGCCGT+AGG | - | chr1.1:1506036-1506055 | MS.gene27272:intron | 35.0% |
! | TTTGATGTTATGGCTCTGTT+TGG | - | chr1.1:1504037-1504056 | MS.gene27272:intron | 35.0% |
! | TTTTAGTCGAATGCTTGGAA+GGG | - | chr1.1:1508290-1508309 | MS.gene27272:intron | 35.0% |
!! | AAAACCAAGCTCTGAAGTTT+CGG | - | chr1.1:1509018-1509037 | MS.gene27272:intron | 35.0% |
!! | ACGGCTAGATTAGTCTTAAA+TGG | + | chr1.1:1506036-1506055 | None:intergenic | 35.0% |
!! | GAATTGATGACAGTTTTGTC+CGG | + | chr1.1:1505369-1505388 | None:intergenic | 35.0% |
!! | GGTACTCGTTTGATTAGTTT+GGG | + | chr1.1:1508077-1508096 | None:intergenic | 35.0% |
!! | GTCAAGTGTGTCACTTAATA+TGG | + | chr1.1:1504863-1504882 | None:intergenic | 35.0% |
!! | TGTTGATACAGTAGTTCTGA+AGG | + | chr1.1:1506171-1506190 | None:intergenic | 35.0% |
!! | TTAGCTTGTTAGAAATGCCA+CGG | - | chr1.1:1506291-1506310 | MS.gene27272:intron | 35.0% |
!! | TTCCTGGAAAGTATTAGTTG+TGG | - | chr1.1:1506200-1506219 | MS.gene27272:intron | 35.0% |
!! | TTGGATTTTGAGTCAAAAGC+AGG | - | chr1.1:1508424-1508443 | MS.gene27272:intron | 35.0% |
!! | TTTTTAGTCGAATGCTTGGA+AGG | - | chr1.1:1508289-1508308 | MS.gene27272:intron | 35.0% |
!!! | CAAGTTTTTAGTCGAATGCT+TGG | - | chr1.1:1508285-1508304 | MS.gene27272:intron | 35.0% |
!!! | GTGTTGGTTTTTCTAGTCAT+GGG | + | chr1.1:1508035-1508054 | None:intergenic | 35.0% |
!!! | GTTTTTTTCCTATTATGCCG+TGG | + | chr1.1:1506311-1506330 | None:intergenic | 35.0% |
!!! | TACCTTTTGCTGTTCACTAT+TGG | + | chr1.1:1507948-1507967 | None:intergenic | 35.0% |
!!! | TGTGTTGGTTTTTCTAGTCA+TGG | + | chr1.1:1508036-1508055 | None:intergenic | 35.0% |
!!! | TGTTGGTTTTTCTAGTCATG+GGG | + | chr1.1:1508034-1508053 | None:intergenic | 35.0% |
!!! | TTGTTACAGGTTTTGGTTCA+TGG | - | chr1.1:1506915-1506934 | MS.gene27272:intron | 35.0% |
AACCACTCATCAACATTCCA+CGG | + | chr1.1:1507080-1507099 | None:intergenic | 40.0% | |
ACAGTTGTGAAAAGCAAACG+GGG | - | chr1.1:1505864-1505883 | MS.gene27272:intron | 40.0% | |
ACTGAACTGGTGTGAACATT+AGG | - | chr1.1:1505311-1505330 | MS.gene27272:intron | 40.0% | |
AGTAGGAAACTACATACCTC+TGG | + | chr1.1:1508650-1508669 | None:intergenic | 40.0% | |
ATTATGAGAATTGGCAGCGA+TGG | - | chr1.1:1508980-1508999 | MS.gene27272:intron | 40.0% | |
CAACAATGTATGGTCGTTCA+AGG | + | chr1.1:1508607-1508626 | None:intergenic | 40.0% | |
CACAGTTGTGAAAAGCAAAC+GGG | - | chr1.1:1505863-1505882 | MS.gene27272:intron | 40.0% | |
CACCAATAGTGAACAGCAAA+AGG | - | chr1.1:1507943-1507962 | MS.gene27272:intron | 40.0% | |
CATACATTTAGCCCCTGAAA+TGG | - | chr1.1:1508773-1508792 | MS.gene27272:intron | 40.0% | |
CATGGTTAGCGAGATGTTAA+AGG | - | chr1.1:1509298-1509317 | MS.gene27272:CDS | 40.0% | |
CCCAAAGGAAAAGAAACTTG+AGG | - | chr1.1:1509066-1509085 | MS.gene27272:intron | 40.0% | |
CTAACTCCAATAACAGAGTG+AGG | + | chr1.1:1509103-1509122 | None:intergenic | 40.0% | |
CTTAATGGTGATCCCAACTT+GGG | - | chr1.1:1507510-1507529 | MS.gene27272:intron | 40.0% | |
CTTACTTGATTGCATCTCTC+TGG | - | chr1.1:1506411-1506430 | MS.gene27272:intron | 40.0% | |
GAAGATTGTGAAGGATAGTG+TGG | - | chr1.1:1507181-1507200 | MS.gene27272:intron | 40.0% | |
GCAAACAAACCTAAAGGAAC+AGG | + | chr1.1:1504006-1504025 | None:intergenic | 40.0% | |
GCACAGTTGTGAAAAGCAAA+CGG | - | chr1.1:1505862-1505881 | MS.gene27272:intron | 40.0% | |
GCGAGATGTTAAAGGAGATA+AGG | - | chr1.1:1509306-1509325 | MS.gene27272:CDS | 40.0% | |
GTGAAAGACTGCTTTGTAGA+AGG | - | chr1.1:1507334-1507353 | MS.gene27272:CDS | 40.0% | |
GTTCGTATTCCTGTTCCTTT+AGG | - | chr1.1:1503994-1504013 | MS.gene27272:intron | 40.0% | |
GTTGTACAGATTCACATTGG+TGG | - | chr1.1:1506062-1506081 | MS.gene27272:intron | 40.0% | |
GTTGTGGTTTACACCTATCT+TGG | - | chr1.1:1506216-1506235 | MS.gene27272:intron | 40.0% | |
TAACGTGATGAGAGATGACT+CGG | - | chr1.1:1506346-1506365 | MS.gene27272:intron | 40.0% | |
TACAGCCAACGAATTTCACT+TGG | + | chr1.1:1507308-1507327 | None:intergenic | 40.0% | |
TACTTGAAGTTGTGGGTGTT+TGG | - | chr1.1:1507864-1507883 | MS.gene27272:intron | 40.0% | |
TAGAAATGCCACGGCATAAT+AGG | - | chr1.1:1506300-1506319 | MS.gene27272:intron | 40.0% | |
TAGCTTAGATGGTAAAAGGC+TGG | - | chr1.1:1505147-1505166 | MS.gene27272:intron | 40.0% | |
TATGGTCGTTCAAGGTAATC+AGG | + | chr1.1:1508599-1508618 | None:intergenic | 40.0% | |
TCCCGTAAGTATAGCTTAGA+TGG | - | chr1.1:1505136-1505155 | MS.gene27272:intron | 40.0% | |
TGATGAAGTTCTTGTTGCGA+GGG | - | chr1.1:1505917-1505936 | MS.gene27272:intron | 40.0% | |
TGCTTGGAAGGGAGTTTAAT+TGG | - | chr1.1:1508301-1508320 | MS.gene27272:intron | 40.0% | |
TGGAGGGACATTTGATATGT+TGG | - | chr1.1:1505167-1505186 | MS.gene27272:intron | 40.0% | |
TTAGATGGTAAAAGGCTGGA+GGG | - | chr1.1:1505151-1505170 | MS.gene27272:intron | 40.0% | |
TTGAGCTTATCTACTGACAG+CGG | + | chr1.1:1504634-1504653 | None:intergenic | 40.0% | |
! | CGGTACTCGTTTGATTAGTT+TGG | + | chr1.1:1508078-1508097 | None:intergenic | 40.0% |
! | GAAACTTCAGAGCTTGGTTT+TGG | + | chr1.1:1509019-1509038 | None:intergenic | 40.0% |
! | GGGGAATTTGGTTCCTTTAA+AGG | - | chr1.1:1508136-1508155 | MS.gene27272:intron | 40.0% |
! | GTATTCGTCTGAAGCTACAT+TGG | - | chr1.1:1507542-1507561 | MS.gene27272:intron | 40.0% |
! | GTTTCTACATCTAGAACCCA+AGG | - | chr1.1:1508804-1508823 | MS.gene27272:intron | 40.0% |
! | TGAACAGCAAAAGGTATGCT+AGG | - | chr1.1:1507952-1507971 | MS.gene27272:intron | 40.0% |
!! | AAATTTTGACCTAAGCCGAC+TGG | + | chr1.1:1509251-1509270 | None:intergenic | 40.0% |
!! | AATTTTGACCTAAGCCGACT+GGG | + | chr1.1:1509250-1509269 | None:intergenic | 40.0% |
!! | CTAGTGTTGCTTCTATGTGA+AGG | - | chr1.1:1504696-1504715 | MS.gene27272:intron | 40.0% |
!! | CTTATAGAAGGTGCTCACTT+GGG | - | chr1.1:1507579-1507598 | MS.gene27272:intron | 40.0% |
!! | CTTCCAATTAGTGGTGTTAC+AGG | - | chr1.1:1504184-1504203 | MS.gene27272:CDS | 40.0% |
!! | GATGTGTTCTAAAGCATGAG+TGG | - | chr1.1:1507205-1507224 | MS.gene27272:intron | 40.0% |
!! | GATTTGCCTGGTCTTATAGA+AGG | - | chr1.1:1507567-1507586 | MS.gene27272:intron | 40.0% |
!! | GTGTGTCACTTAATATGGGA+CGG | + | chr1.1:1504858-1504877 | None:intergenic | 40.0% |
!! | TCTTATAGAAGGTGCTCACT+TGG | - | chr1.1:1507578-1507597 | MS.gene27272:intron | 40.0% |
!!! | GTCTTGGTCGCAATTTTTTG+AGG | - | chr1.1:1507701-1507720 | MS.gene27272:intron | 40.0% |
!!! | GTTGGTTTTTCTAGTCATGG+GGG | + | chr1.1:1508033-1508052 | None:intergenic | 40.0% |
!!! | TTGGGATTTTTTGTGCGTTG+AGG | + | chr1.1:1508059-1508078 | None:intergenic | 40.0% |
!!! | TTTTGGTTCATGGTCAACCT+GGG | - | chr1.1:1506925-1506944 | MS.gene27272:intron | 40.0% |
AAACAGAGCCTCCCATTTCA+GGG | + | chr1.1:1508788-1508807 | None:intergenic | 45.0% | |
AAGCTCGCACAATTTCTACG+AGG | + | chr1.1:1504609-1504628 | None:intergenic | 45.0% | |
ACTAGAAACCAACGGTTCCT+TGG | + | chr1.1:1509357-1509376 | None:intergenic | 45.0% | |
AGCTCGCACAATTTCTACGA+GGG | + | chr1.1:1504608-1504627 | None:intergenic | 45.0% | |
AGGTGCTTATGTCAGTAGAC+AGG | - | chr1.1:1504204-1504223 | MS.gene27272:CDS | 45.0% | |
AGGTTTAATGCGAAACGTGG+TGG | - | chr1.1:1503910-1503929 | MS.gene27272:CDS | 45.0% | |
ATCAACGCACTGCCTTAAAG+CGG | + | chr1.1:1509333-1509352 | None:intergenic | 45.0% | |
ATCATTGCGGAGTCTAGTGA+GGG | - | chr1.1:1508749-1508768 | MS.gene27272:intron | 45.0% | |
ATGGTAAAGTAGACGCCATG+TGG | + | chr1.1:1508838-1508857 | None:intergenic | 45.0% | |
CAGTAGATGCGTCAACAACA+TGG | + | chr1.1:1507753-1507772 | None:intergenic | 45.0% | |
CCAAATCTTGGACGCCTTAA+TGG | - | chr1.1:1507495-1507514 | MS.gene27272:intron | 45.0% | |
CCTTAATGGTGATCCCAACT+TGG | - | chr1.1:1507509-1507528 | MS.gene27272:intron | 45.0% | |
CGCAACAAGAACTTCATCAC+CGG | + | chr1.1:1505916-1505935 | None:intergenic | 45.0% | |
CTAACCATACATGGCCAAAG+TGG | + | chr1.1:1505637-1505656 | None:intergenic | 45.0% | |
CTCAGATTGAGGGTAGTAGT+AGG | + | chr1.1:1508667-1508686 | None:intergenic | 45.0% | |
CTTACCACTTTGGCCATGTA+TGG | - | chr1.1:1505630-1505649 | MS.gene27272:CDS | 45.0% | |
CTTAGATGGTAAAAGGCTGG+AGG | - | chr1.1:1505150-1505169 | MS.gene27272:intron | 45.0% | |
GAATAAGATTGACCTGCCAG+AGG | - | chr1.1:1508631-1508650 | MS.gene27272:intron | 45.0% | |
GACTGAAGAAAGTGACCCAA+AGG | - | chr1.1:1509051-1509070 | MS.gene27272:intron | 45.0% | |
GATGAAGTTCTTGTTGCGAG+GGG | - | chr1.1:1505918-1505937 | MS.gene27272:intron | 45.0% | |
GCAACAAGAACTTCATCACC+GGG | + | chr1.1:1505915-1505934 | None:intergenic | 45.0% | |
GCACCTGTAACACCACTAAT+TGG | + | chr1.1:1504190-1504209 | None:intergenic | 45.0% | |
GGAACAGGAATACGAACAGT+AGG | + | chr1.1:1503991-1504010 | None:intergenic | 45.0% | |
GGTGCTTATGTCAGTAGACA+GGG | - | chr1.1:1504205-1504224 | MS.gene27272:CDS | 45.0% | |
GTCACTTAATATGGGACGGA+GGG | + | chr1.1:1504854-1504873 | None:intergenic | 45.0% | |
GTGATGAAGTTCTTGTTGCG+AGG | - | chr1.1:1505916-1505935 | MS.gene27272:intron | 45.0% | |
GTGCTTATGTCAGTAGACAG+GGG | - | chr1.1:1504206-1504225 | MS.gene27272:CDS | 45.0% | |
TAATACGGAAGGGTGAGCTT+TGG | + | chr1.1:1508865-1508884 | None:intergenic | 45.0% | |
TCACTAGACTCCGCAATGAT+GGG | + | chr1.1:1508749-1508768 | None:intergenic | 45.0% | |
TGAGCACCTTCTATAAGACC+AGG | + | chr1.1:1507576-1507595 | None:intergenic | 45.0% | |
TGTAGGGACTTCCAAATGCT+GGG | - | chr1.1:1507400-1507419 | MS.gene27272:intron | 45.0% | |
TGTGGCACACTAGAAACCAA+CGG | + | chr1.1:1509365-1509384 | None:intergenic | 45.0% | |
TTGTAGGGACTTCCAAATGC+TGG | - | chr1.1:1507399-1507418 | MS.gene27272:intron | 45.0% | |
! | AACCGTGGAATGTTGATGAG+TGG | - | chr1.1:1507075-1507094 | MS.gene27272:intron | 45.0% |
! | CCAAGTTGGGATCACCATTA+AGG | + | chr1.1:1507512-1507531 | None:intergenic | 45.0% |
! | CCATTAAGGCGTCCAAGATT+TGG | + | chr1.1:1507498-1507517 | None:intergenic | 45.0% |
! | GATGAGAGATGACTCGGATA+AGG | - | chr1.1:1506352-1506371 | MS.gene27272:intron | 45.0% |
! | GGTGGTAATGTTGATGCTGT+TGG | - | chr1.1:1503928-1503947 | MS.gene27272:intron | 45.0% |
! | TGTCACTTAATATGGGACGG+AGG | + | chr1.1:1504855-1504874 | None:intergenic | 45.0% |
! | TTAGCTGATTTAGCACGACC+CGG | - | chr1.1:1505894-1505913 | MS.gene27272:intron | 45.0% |
! | TTTGGTTCATGGTCAACCTG+GGG | - | chr1.1:1506926-1506945 | MS.gene27272:intron | 45.0% |
! | TTTTGTGCGTTGAGGTGTGT+TGG | + | chr1.1:1508051-1508070 | None:intergenic | 45.0% |
!! | AGCGTTGATTTCCCAGCATT+TGG | + | chr1.1:1507414-1507433 | None:intergenic | 45.0% |
!! | GTCTGCATCGTTTTTGCAGT+GGG | + | chr1.1:1507994-1508013 | None:intergenic | 45.0% |
!! | TCTGCATCGTTTTTGCAGTG+GGG | + | chr1.1:1507993-1508012 | None:intergenic | 45.0% |
!! | TGTCTGCATCGTTTTTGCAG+TGG | + | chr1.1:1507995-1508014 | None:intergenic | 45.0% |
!!! | GTTTTGGTTCATGGTCAACC+TGG | - | chr1.1:1506924-1506943 | MS.gene27272:intron | 45.0% |
AACAACATGGACCAGTAGCC+GGG | + | chr1.1:1507740-1507759 | None:intergenic | 50.0% | |
AACAGAGCCTCCCATTTCAG+GGG | + | chr1.1:1508787-1508806 | None:intergenic | 50.0% | |
ACCTGGGGAGGAAGTTAAGT+TGG | - | chr1.1:1506941-1506960 | MS.gene27272:intron | 50.0% | |
ATACATCCCTGCTCCCAAGT+TGG | + | chr1.1:1507526-1507545 | None:intergenic | 50.0% | |
ATCGGGTTTCGCAAGCGTAA+TGG | + | chr1.1:1507445-1507464 | None:intergenic | 50.0% | |
CAACAACATGGACCAGTAGC+CGG | + | chr1.1:1507741-1507760 | None:intergenic | 50.0% | |
CATCATTGCGGAGTCTAGTG+AGG | - | chr1.1:1508748-1508767 | MS.gene27272:intron | 50.0% | |
CATTTAGCCCCTGAAATGGG+AGG | - | chr1.1:1508777-1508796 | MS.gene27272:intron | 50.0% | |
CCAATAACAGAGTGAGGTCG+TGG | + | chr1.1:1509097-1509116 | None:intergenic | 50.0% | |
CCACGACCTCACTCTGTTAT+TGG | - | chr1.1:1509094-1509113 | MS.gene27272:intron | 50.0% | |
CTCACTAGACTCCGCAATGA+TGG | + | chr1.1:1508750-1508769 | None:intergenic | 50.0% | |
CTCGCACAATTTCTACGAGG+GGG | + | chr1.1:1504606-1504625 | None:intergenic | 50.0% | |
GAAACAGAGCCTCCCATTTC+AGG | + | chr1.1:1508789-1508808 | None:intergenic | 50.0% | |
GCTACATTGGCAGATTTGCC+TGG | - | chr1.1:1507555-1507574 | MS.gene27272:intron | 50.0% | |
GCTCGCACAATTTCTACGAG+GGG | + | chr1.1:1504607-1504626 | None:intergenic | 50.0% | |
GGAAACTACATACCTCTGGC+AGG | + | chr1.1:1508646-1508665 | None:intergenic | 50.0% | |
TACATCCCTGCTCCCAAGTT+GGG | + | chr1.1:1507525-1507544 | None:intergenic | 50.0% | |
TCCAACTTAACTTCCTCCCC+AGG | + | chr1.1:1506945-1506964 | None:intergenic | 50.0% | |
TGAGCCGAAACTTCAGAGCT+TGG | + | chr1.1:1509025-1509044 | None:intergenic | 50.0% | |
TGCTGGGAAATCAACGCTTC+TGG | - | chr1.1:1507416-1507435 | MS.gene27272:intron | 50.0% | |
! | AGGAGATAAGGGCCGCTTTA+AGG | - | chr1.1:1509318-1509337 | MS.gene27272:CDS | 50.0% |
! | TCATAGTACCCAGTCGGCTT+AGG | - | chr1.1:1509239-1509258 | MS.gene27272:CDS | 50.0% |
! | TGAGGCATCTAAGAAGGACC+CGG | - | chr1.1:1507719-1507738 | MS.gene27272:intron | 50.0% |
!! | AAGGCAGTGCGTTGATTCCA+AGG | - | chr1.1:1509337-1509356 | MS.gene27272:CDS | 50.0% |
!! | AGAAGGTGCTCACTTGGGAA+AGG | - | chr1.1:1507584-1507603 | MS.gene27272:intron | 50.0% |
!! | CGTTGATTCCAAGGAACCGT+TGG | - | chr1.1:1509346-1509365 | MS.gene27272:CDS | 50.0% |
AAAGGGAGGCTCAGTGCATG+AGG | - | chr1.1:1508721-1508740 | MS.gene27272:intron | 55.0% | |
AAAGTAGACGCCATGTGGCG+AGG | + | chr1.1:1508833-1508852 | None:intergenic | 55.0% | |
ATGTCAGTAGACAGGGGCGA+AGG | - | chr1.1:1504212-1504231 | MS.gene27272:CDS | 55.0% | |
CTACGAGTTGTAGCCGACGT+TGG | - | chr1.1:1506972-1506991 | MS.gene27272:intron | 55.0% | |
GAAGTTCTTGTTGCGAGGGG+TGG | - | chr1.1:1505921-1505940 | MS.gene27272:intron | 55.0% | |
GCATGAGGCTCCCATCATTG+CGG | - | chr1.1:1508736-1508755 | MS.gene27272:intron | 55.0% | |
GTGATCCCAACTTGGGAGCA+GGG | - | chr1.1:1507517-1507536 | MS.gene27272:intron | 55.0% | |
TCATGGCCATGGGGTAGCAA+TGG | - | chr1.1:1504238-1504257 | MS.gene27272:CDS | 55.0% | |
TCTAAGAAGGACCCGGCTAC+TGG | - | chr1.1:1507726-1507745 | MS.gene27272:intron | 55.0% | |
TTGCTACCCCATGGCCATGA+AGG | + | chr1.1:1504238-1504257 | None:intergenic | 55.0% | |
! | AAGGGTGAGCTTTGGCGCAA+TGG | + | chr1.1:1508857-1508876 | None:intergenic | 55.0% |
! | CAACGTCGGCTACAACTCGT+AGG | + | chr1.1:1506974-1506993 | None:intergenic | 55.0% |
CGAAGGCCTTCATGGCCATG+GGG | - | chr1.1:1504229-1504248 | MS.gene27272:CDS | 60.0% | |
CTTGTTGCGAGGGGTGGACA+AGG | - | chr1.1:1505927-1505946 | MS.gene27272:intron | 60.0% | |
GCGAAGGCCTTCATGGCCAT+GGG | - | chr1.1:1504228-1504247 | MS.gene27272:CDS | 60.0% | |
GGGTAGCCATTGCTACCCCA+TGG | + | chr1.1:1504247-1504266 | None:intergenic | 60.0% | |
GGTGATCCCAACTTGGGAGC+AGG | - | chr1.1:1507516-1507535 | MS.gene27272:intron | 60.0% | |
GGTTCATGGTCAACCTGGGG+AGG | - | chr1.1:1506929-1506948 | MS.gene27272:intron | 60.0% | |
TTGCGAGGGGTGGACAAGGA+GGG | - | chr1.1:1505931-1505950 | MS.gene27272:intron | 60.0% | |
CCATGTGGCGAGGTGGCCTT+GGG | + | chr1.1:1508823-1508842 | None:intergenic | 65.0% | |
GACAGGGGCGAAGGCCTTCA+TGG | - | chr1.1:1504221-1504240 | MS.gene27272:CDS | 65.0% | |
GGCGAAGGCCTTCATGGCCA+TGG | - | chr1.1:1504227-1504246 | MS.gene27272:CDS | 65.0% | |
GTAGACGCCATGTGGCGAGG+TGG | + | chr1.1:1508830-1508849 | None:intergenic | 65.0% | |
GTTGCGAGGGGTGGACAAGG+AGG | - | chr1.1:1505930-1505949 | MS.gene27272:intron | 65.0% | |
TGCGAGGGGTGGACAAGGAG+GGG | - | chr1.1:1505932-1505951 | MS.gene27272:intron | 65.0% | |
CCCAAGGCCACCTCGCCACA+TGG | - | chr1.1:1508820-1508839 | MS.gene27272:intron | 70.0% | |
GCCATGTGGCGAGGTGGCCT+TGG | + | chr1.1:1508824-1508843 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 1503832 | 1509388 | 1503832 | ID=MS.gene27272 |
chr1.1 | mRNA | 1503832 | 1509388 | 1503832 | ID=MS.gene27272.t1;Parent=MS.gene27272 |
chr1.1 | exon | 1509205 | 1509388 | 1509205 | ID=MS.gene27272.t1.exon1;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1509205 | 1509388 | 1509205 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1507267 | 1507358 | 1507267 | ID=MS.gene27272.t1.exon2;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1507267 | 1507358 | 1507267 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1506847 | 1506930 | 1506847 | ID=MS.gene27272.t1.exon3;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1506847 | 1506930 | 1506847 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1506219 | 1506296 | 1506219 | ID=MS.gene27272.t1.exon4;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1506219 | 1506296 | 1506219 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1505615 | 1505815 | 1505615 | ID=MS.gene27272.t1.exon5;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1505615 | 1505815 | 1505615 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1505413 | 1505520 | 1505413 | ID=MS.gene27272.t1.exon6;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1505413 | 1505520 | 1505413 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1504568 | 1504642 | 1504568 | ID=MS.gene27272.t1.exon7;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1504568 | 1504642 | 1504568 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1504092 | 1504273 | 1504092 | ID=MS.gene27272.t1.exon8;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1504092 | 1504273 | 1504092 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
chr1.1 | exon | 1503832 | 1503931 | 1503832 | ID=MS.gene27272.t1.exon9;Parent=MS.gene27272.t1 |
chr1.1 | CDS | 1503832 | 1503931 | 1503832 | ID=cds.MS.gene27272.t1;Parent=MS.gene27272.t1 |
Gene Sequence |
Protein sequence |