Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27938.t1 | XP_003629967.1 | 96.7 | 422 | 14 | 0 | 1 | 422 | 1 | 422 | 4.10E-233 | 817 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27938.t1 | Q681Y3 | 69.6 | 392 | 117 | 1 | 31 | 422 | 43 | 432 | 4.8e-158 | 558.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27938.t1 | G7L8V3 | 96.7 | 422 | 14 | 0 | 1 | 422 | 1 | 422 | 2.9e-233 | 817.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene27938 | 0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene049195 | MS.gene27938 | 0.841539 | 4.47E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene27938 | 0.834894 | 2.30E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene27938 | 0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene27938 | 0.814186 | 1.75E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene27938 | 0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene27938 | 0.849589 | 2.93E-60 | -1.69E-46 |
| MS.gene050330 | MS.gene27938 | -0.818094 | 2.34E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene27938 | 0.865499 | 5.65E-65 | -1.69E-46 |
| MS.gene050560 | MS.gene27938 | 0.846575 | 1.99E-59 | -1.69E-46 |
| MS.gene050650 | MS.gene27938 | 0.812269 | 4.61E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene27938 | 0.832138 | 1.12E-55 | -1.69E-46 |
| MS.gene050820 | MS.gene27938 | 0.819118 | 1.37E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene27938 | 0.813115 | 3.01E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene27938 | 0.86019 | 2.46E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene27938 | 0.821226 | 4.52E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene27938 | -0.834742 | 2.51E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene27938 | 0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene27938 | 0.820362 | 7.14E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene27938 | 0.852401 | 4.73E-61 | -1.69E-46 |
| MS.gene054011 | MS.gene27938 | 0.80991 | 1.50E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene27938 | 0.800455 | 1.43E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene27938 | 0.854275 | 1.37E-61 | -1.69E-46 |
| MS.gene054241 | MS.gene27938 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene054473 | MS.gene27938 | 0.843716 | 1.18E-58 | -1.69E-46 |
| MS.gene054719 | MS.gene27938 | 0.806099 | 9.70E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene27938 | 0.80044 | 1.44E-48 | -1.69E-46 |
| MS.gene054920 | MS.gene27938 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene27938 | 0.808903 | 2.46E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene27938 | 0.848391 | 6.31E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene27938 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene27938 | 0.811789 | 5.87E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene27938 | 0.841265 | 5.28E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene27938 | 0.818619 | 1.78E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene27938 | 0.817553 | 3.11E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene27938 | 0.841882 | 3.63E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene27938 | 0.833759 | 4.43E-56 | -1.69E-46 |
| MS.gene056902 | MS.gene27938 | 0.800138 | 1.66E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene27938 | 0.819444 | 1.16E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene27938 | 0.852382 | 4.79E-61 | -1.69E-46 |
| MS.gene057245 | MS.gene27938 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene27938 | 0.84655 | 2.02E-59 | -1.69E-46 |
| MS.gene057476 | MS.gene27938 | 0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene27938 | 0.831121 | 2.00E-55 | -1.69E-46 |
| MS.gene05811 | MS.gene27938 | 0.825137 | 5.52E-54 | -1.69E-46 |
| MS.gene058142 | MS.gene27938 | 0.848685 | 5.24E-60 | -1.69E-46 |
| MS.gene058736 | MS.gene27938 | 0.823312 | 1.48E-53 | -1.69E-46 |
| MS.gene058739 | MS.gene27938 | 0.825409 | 4.76E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene27938 | 0.806122 | 9.59E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene27938 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene27938 | 0.831781 | 1.37E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene27938 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene27938 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene27938 | 0.816816 | 4.55E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene27938 | 0.834871 | 2.33E-56 | -1.69E-46 |
| MS.gene061114 | MS.gene27938 | -0.846024 | 2.82E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27938.t1 | MTR_8g088790 | 96.682 | 422 | 14 | 0 | 1 | 422 | 1 | 422 | 0.0 | 845 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27938.t1 | AT1G60990 | 67.892 | 408 | 120 | 2 | 24 | 422 | 27 | 432 | 0.0 | 574 |
| MS.gene27938.t1 | AT1G60990 | 67.892 | 408 | 120 | 2 | 24 | 422 | 27 | 432 | 0.0 | 574 |
| MS.gene27938.t1 | AT1G60990 | 67.892 | 408 | 120 | 2 | 24 | 422 | 27 | 432 | 0.0 | 574 |
| MS.gene27938.t1 | AT1G11860 | 25.444 | 338 | 231 | 11 | 93 | 413 | 70 | 403 | 3.55e-12 | 68.2 |
| MS.gene27938.t1 | AT1G11860 | 25.444 | 338 | 231 | 11 | 93 | 413 | 70 | 403 | 3.55e-12 | 68.2 |
| MS.gene27938.t1 | AT1G11860 | 25.444 | 338 | 231 | 11 | 93 | 413 | 85 | 418 | 3.64e-12 | 68.2 |
Find 109 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATCTTACTTGGCTACTTT+TGG | 0.165355 | 4.4:-12270497 | None:intergenic |
| ACTGCAGGTGCCGAGGTTTC+TGG | 0.175027 | 4.4:+12269028 | MS.gene27938:CDS |
| TTTCCAACTCCTATAGTTAT+AGG | 0.205103 | 4.4:-12271163 | None:intergenic |
| ACCCATCGACCACGACTTCT+TGG | 0.283454 | 4.4:+12267995 | MS.gene27938:CDS |
| TACTTACTTGTTCAGCATTT+CGG | 0.314008 | 4.4:-12270267 | None:intergenic |
| GCAAACGAGCTTATTTGTTT+TGG | 0.315922 | 4.4:+12270468 | MS.gene27938:CDS |
| CCATCGGAACACTTCGGATT+AGG | 0.320328 | 4.4:+12273564 | MS.gene27938:CDS |
| ACGTCCTGGAGGCCTGTCTA+TGG | 0.323499 | 4.4:+12272871 | MS.gene27938:CDS |
| CACTGGATGCCGCAGACAAT+GGG | 0.348039 | 4.4:+12269089 | MS.gene27938:CDS |
| TTGAACGTAGGTGATCTTAT+TGG | 0.350341 | 4.4:+12270597 | MS.gene27938:CDS |
| CTGCAGGTGCCGAGGTTTCT+GGG | 0.353745 | 4.4:+12269029 | MS.gene27938:CDS |
| ATGGAGTCAAACAGAGGTTA+TGG | 0.353861 | 4.4:+12273045 | MS.gene27938:CDS |
| TGCTCAAGGGGCTGTTGCAA+TGG | 0.369762 | 4.4:+12271258 | MS.gene27938:CDS |
| CTTGTTCAGCATTTCGGTAA+TGG | 0.379644 | 4.4:-12270261 | None:intergenic |
| GCTCAAGGGGCTGTTGCAAT+GGG | 0.395855 | 4.4:+12271259 | MS.gene27938:CDS |
| TGGTTTCAGCAGAGACTTGT+AGG | 0.401443 | 4.4:+12270237 | MS.gene27938:CDS |
| TCGTTTGTGAGCTCCATTCC+AGG | 0.405499 | 4.4:-12272843 | None:intergenic |
| CGGCAGCTGCTCCATCTGTC+TGG | 0.407182 | 4.4:+12271224 | MS.gene27938:CDS |
| CCAGAGTACTGCAAACTTTG+AGG | 0.413393 | 4.4:+12269869 | MS.gene27938:CDS |
| AACTTTGAGGGTCTACAGGC+AGG | 0.423954 | 4.4:+12269882 | MS.gene27938:CDS |
| ATTGTTGGAGACAACATCAT+TGG | 0.427946 | 4.4:+12273627 | MS.gene27938:CDS |
| TCACACTTCGGCCGGATAAG+AGG | 0.440438 | 4.4:+12269610 | MS.gene27938:CDS |
| GATAAGCAGCCTATAACTAT+AGG | 0.445173 | 4.4:+12271154 | MS.gene27938:CDS |
| GGTGCCGAGGTTTCTGGGGA+AGG | 0.446680 | 4.4:+12269034 | MS.gene27938:CDS |
| CTCAGGTTGTTACAAAGGAC+AGG | 0.451833 | 4.4:+12272995 | MS.gene27938:intron |
| TCTCAACAGCGTCTGCCATC+TGG | 0.453158 | 4.4:+12273675 | MS.gene27938:CDS |
| TGCAAACTTTGAGGGTCTAC+AGG | 0.456706 | 4.4:+12269878 | MS.gene27938:CDS |
| TTCTCAGGAAGGCCTGCTCC+TGG | 0.456760 | 4.4:+12272825 | MS.gene27938:intron |
| TGGAGTCAAACAGAGGTTAT+GGG | 0.459832 | 4.4:+12273046 | MS.gene27938:CDS |
| GTGAGCTCCATTCCAGGAGC+AGG | 0.460015 | 4.4:-12272837 | None:intergenic |
| CTGAGGTTTGGGAGTAAACA+AGG | 0.460947 | 4.4:-12267882 | None:intergenic |
| CAGAGTACTGCAAACTTTGA+GGG | 0.462222 | 4.4:+12269870 | MS.gene27938:CDS |
| GCACTGGATGCCGCAGACAA+TGG | 0.467510 | 4.4:+12269088 | MS.gene27938:CDS |
| GAAGGAGACAGTGTAATTGT+TGG | 0.468448 | 4.4:+12273612 | MS.gene27938:CDS |
| AAGTCGTGGTCGATGGGTGG+AGG | 0.470425 | 4.4:-12267990 | None:intergenic |
| TGTGAGCAGAATCTGAGGTT+TGG | 0.470983 | 4.4:-12267894 | None:intergenic |
| AAATGAAAGTACCTCTTATC+CGG | 0.476064 | 4.4:-12269621 | None:intergenic |
| GGTCGATGGGTGGAGGGGAA+AGG | 0.476226 | 4.4:-12267983 | None:intergenic |
| GTGAGCAGAATCTGAGGTTT+GGG | 0.480461 | 4.4:-12267893 | None:intergenic |
| TTGCAATGGGTTCTAATGCT+TGG | 0.480918 | 4.4:+12271272 | MS.gene27938:CDS |
| CTTTCTGCAGCCGCAGAACC+TGG | 0.482443 | 4.4:+12273077 | MS.gene27938:CDS |
| GATCTTATTGGAAAACCATA+TGG | 0.483670 | 4.4:+12270609 | MS.gene27938:CDS |
| TCTTGTTCTTCTTGTTGCGT+TGG | 0.487003 | 4.4:-12267917 | None:intergenic |
| AGAAATTGAGTTCCATAGAC+AGG | 0.487933 | 4.4:-12272883 | None:intergenic |
| GGTTTGAGGAATAGTGAAGA+TGG | 0.488115 | 4.4:-12267861 | None:intergenic |
| CCTCAAAGTTTGCAGTACTC+TGG | 0.489181 | 4.4:-12269869 | None:intergenic |
| CTTCGAAGGTTGAAGTAAGA+TGG | 0.490320 | 4.4:-12267825 | None:intergenic |
| GCCAGGCTCATAACATATGA+TGG | 0.495682 | 4.4:+12273026 | MS.gene27938:CDS |
| AGGAAGGCCTGCTCCTGGAA+TGG | 0.496441 | 4.4:+12272830 | MS.gene27938:intron |
| CAGCCTATAACTATAGGAGT+TGG | 0.503689 | 4.4:+12271160 | MS.gene27938:CDS |
| GGAAATATCATTTCTGAAGG+TGG | 0.508021 | 4.4:+12271181 | MS.gene27938:CDS |
| GTGCCGAGGTTTCTGGGGAA+GGG | 0.511609 | 4.4:+12269035 | MS.gene27938:CDS |
| TACCAAGAAGTCGTGGTCGA+TGG | 0.513887 | 4.4:-12267997 | None:intergenic |
| AAATGTTGATGAGTGCCATA+TGG | 0.514065 | 4.4:-12270624 | None:intergenic |
| AGTTCCATAGACAGGCCTCC+AGG | 0.514728 | 4.4:-12272875 | None:intergenic |
| TCCATCATATGTTATGAGCC+TGG | 0.520694 | 4.4:-12273027 | None:intergenic |
| TATTGCACATGCGTGGATCA+TGG | 0.521802 | 4.4:+12270086 | MS.gene27938:CDS |
| AGTCGTGGTCGATGGGTGGA+GGG | 0.521890 | 4.4:-12267989 | None:intergenic |
| CACAAACGAATTCAACGTCC+TGG | 0.523539 | 4.4:+12272857 | MS.gene27938:CDS |
| TGGATCTTTCACACTTCGGC+CGG | 0.524782 | 4.4:+12269602 | MS.gene27938:CDS |
| ACCAAGAAGTCGTGGTCGAT+GGG | 0.525840 | 4.4:-12267996 | None:intergenic |
| TTGGGAGTAAACAAGGTTTG+AGG | 0.530532 | 4.4:-12267875 | None:intergenic |
| GAGACCATGGTTGGCTTCGA+AGG | 0.530681 | 4.4:-12267839 | None:intergenic |
| GGTAGTATTATCACTGTGGA+TGG | 0.539084 | 4.4:+12273098 | MS.gene27938:CDS |
| CAGACAGATGGAGCAGCTGC+CGG | 0.543197 | 4.4:-12271223 | None:intergenic |
| AGAATAGCTTTCCAGACAGA+TGG | 0.545861 | 4.4:-12271235 | None:intergenic |
| GTCGTGGTCGATGGGTGGAG+GGG | 0.550885 | 4.4:-12267988 | None:intergenic |
| ATATCTATAGTTCGAGCTGT+TGG | 0.554752 | 4.4:-12270066 | None:intergenic |
| CAGGACACTGTCAAAACTGC+AGG | 0.559001 | 4.4:+12269013 | MS.gene27938:intron |
| TGGAAAGCTATTCTTGCTCA+AGG | 0.559551 | 4.4:+12271244 | MS.gene27938:CDS |
| TCGGATTAGGTTACATCAAG+AGG | 0.561096 | 4.4:+12273577 | MS.gene27938:CDS |
| TCATAACGATGAAGAAGCAC+TGG | 0.561241 | 4.4:+12269072 | MS.gene27938:CDS |
| GTTGGAAATATCATTTCTGA+AGG | 0.563837 | 4.4:+12271178 | MS.gene27938:CDS |
| GAACTCAATTTCTCTAAACA+AGG | 0.564868 | 4.4:+12272893 | MS.gene27938:CDS |
| GAAAGCTATTCTTGCTCAAG+GGG | 0.565925 | 4.4:+12271246 | MS.gene27938:CDS |
| GTTGTGGATCTTTCACACTT+CGG | 0.568328 | 4.4:+12269598 | MS.gene27938:CDS |
| AAATTGACTAGTTACACCTC+TGG | 0.573087 | 4.4:+12273534 | MS.gene27938:CDS |
| TTCCGATGGCTTCCTTCCAG+AGG | 0.575249 | 4.4:-12273550 | None:intergenic |
| AAGAGGCAAGCTGCTTCAGA+AGG | 0.575817 | 4.4:+12273594 | MS.gene27938:CDS |
| GGAAAGCTATTCTTGCTCAA+GGG | 0.577897 | 4.4:+12271245 | MS.gene27938:CDS |
| AGACGCTGTTGAGAAAGAAA+AGG | 0.578518 | 4.4:-12273666 | None:intergenic |
| TTGCAGTACTCTGGTTGTGA+AGG | 0.585064 | 4.4:-12269860 | None:intergenic |
| TGCAGGTGCCGAGGTTTCTG+GGG | 0.597176 | 4.4:+12269030 | MS.gene27938:CDS |
| GTGATGGAAAGCTTGAACGT+AGG | 0.598517 | 4.4:+12270585 | MS.gene27938:CDS |
| GGAGTCAAACAGAGGTTATG+GGG | 0.600336 | 4.4:+12273047 | MS.gene27938:CDS |
| GATAATACTACCAGGTTCTG+CGG | 0.603697 | 4.4:-12273087 | None:intergenic |
| GATCCCTTCCCCAGAAACCT+CGG | 0.605258 | 4.4:-12269038 | None:intergenic |
| CCTAATCCGAAGTGTTCCGA+TGG | 0.607681 | 4.4:-12273564 | None:intergenic |
| AATAAGTTGCGAGTTATCCA+AGG | 0.609619 | 4.4:+12271295 | MS.gene27938:CDS |
| AAGAAGTCGTGGTCGATGGG+TGG | 0.610174 | 4.4:-12267993 | None:intergenic |
| ACTTTGAGGGTCTACAGGCA+GGG | 0.610437 | 4.4:+12269883 | MS.gene27938:CDS |
| TGACTAGTTACACCTCTGGA+AGG | 0.612902 | 4.4:+12273538 | MS.gene27938:CDS |
| AGGAAGCCATCGGAACACTT+CGG | 0.620483 | 4.4:+12273558 | MS.gene27938:CDS |
| CTATAGATATTGCACATGCG+TGG | 0.626627 | 4.4:+12270079 | MS.gene27938:CDS |
| TGTCAAAACTGCAGGTGCCG+AGG | 0.627788 | 4.4:+12269021 | MS.gene27938:CDS |
| TACAACAACCCCATTGTCTG+CGG | 0.628493 | 4.4:-12269098 | None:intergenic |
| AATAGTGAAGATGGAGACCA+TGG | 0.638511 | 4.4:-12267852 | None:intergenic |
| GTGAAGATGGAGACCATGGT+TGG | 0.640860 | 4.4:-12267848 | None:intergenic |
| AAGGACAGGAGACTATAGCC+AGG | 0.644196 | 4.4:+12273009 | MS.gene27938:CDS |
| TCAACCTTCGAAGCCAACCA+TGG | 0.648406 | 4.4:+12267835 | MS.gene27938:CDS |
| AACTCAATTTCTCTAAACAA+GGG | 0.653020 | 4.4:+12272894 | MS.gene27938:CDS |
| CACCTCTGGAAGGAAGCCAT+CGG | 0.660284 | 4.4:+12273548 | MS.gene27938:CDS |
| GTTGGTGTGAGCAGAATCTG+AGG | 0.669720 | 4.4:-12267899 | None:intergenic |
| TCCACAGTGATAATACTACC+AGG | 0.673931 | 4.4:-12273095 | None:intergenic |
| TGGAAATTACCAAGAAGTCG+TGG | 0.686676 | 4.4:-12268004 | None:intergenic |
| ACCTGGTAGTATTATCACTG+TGG | 0.707528 | 4.4:+12273094 | MS.gene27938:CDS |
| CATATGATGGAGTCAAACAG+AGG | 0.709677 | 4.4:+12273039 | MS.gene27938:CDS |
| ACTGGATGCCGCAGACAATG+GGG | 0.712791 | 4.4:+12269090 | MS.gene27938:CDS |
| AAACGAATTCAACGTCCTGG+AGG | 0.732724 | 4.4:+12272860 | MS.gene27938:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTTCATATTATAATAC+AGG | + | chr4.4:12269985-12270004 | MS.gene27938:intron | 10.0% |
| !!! | ATTCTCAAATATATATATTT+TGG | + | chr4.4:12271119-12271138 | MS.gene27938:intron | 10.0% |
| !!! | TTTTTTGTTAAAAATAAGAA+AGG | - | chr4.4:12270793-12270812 | None:intergenic | 10.0% |
| !! | ACCATAAATTAATCAATTTA+AGG | - | chr4.4:12269262-12269281 | None:intergenic | 15.0% |
| !! | CATTAACTAAATGATTTATA+TGG | + | chr4.4:12270388-12270407 | MS.gene27938:intron | 15.0% |
| !! | TAAATAATAACAACGTAAAA+CGG | - | chr4.4:12272380-12272399 | None:intergenic | 15.0% |
| !! | TCCTTAAATTGATTAATTTA+TGG | + | chr4.4:12269258-12269277 | MS.gene27938:intron | 15.0% |
| !! | TTTAATATAATTACATGAAC+AGG | + | chr4.4:12270563-12270582 | MS.gene27938:intron | 15.0% |
| !!! | ATATAGATAGAATTTAGAAT+TGG | - | chr4.4:12273351-12273370 | None:intergenic | 15.0% |
| !!! | ATATATATTTTGGAATTTGT+AGG | + | chr4.4:12271129-12271148 | MS.gene27938:intron | 15.0% |
| !!! | ATATTTAAGTTATGTAAAAG+AGG | - | chr4.4:12270971-12270990 | None:intergenic | 15.0% |
| !!! | CTTATTTTATATGAATTTTC+AGG | - | chr4.4:12268099-12268118 | None:intergenic | 15.0% |
| !!! | GATTCTAAATTTTTCTATTA+AGG | + | chr4.4:12273282-12273301 | MS.gene27938:intron | 15.0% |
| !!! | TAAAAATGATTTTTGAAAGA+GGG | - | chr4.4:12270127-12270146 | None:intergenic | 15.0% |
| !!! | TAATTTTAACACGAATATTT+TGG | + | chr4.4:12269796-12269815 | MS.gene27938:intron | 15.0% |
| !!! | TTGTTCTTTTATCTTATTTT+CGG | - | chr4.4:12270335-12270354 | None:intergenic | 15.0% |
| !! | AAAAAAATACAGGAAAATAG+AGG | + | chr4.4:12271816-12271835 | MS.gene27938:intron | 20.0% |
| !! | AATAGACAATTGTGTAAAAT+TGG | - | chr4.4:12268837-12268856 | None:intergenic | 20.0% |
| !! | ACTCATAAATGTATAGATAT+AGG | - | chr4.4:12272489-12272508 | None:intergenic | 20.0% |
| !! | AGAAGTAATATTGTAATAAG+AGG | - | chr4.4:12268875-12268894 | None:intergenic | 20.0% |
| !! | AGAATATTAACAGATAATGT+AGG | - | chr4.4:12271091-12271110 | None:intergenic | 20.0% |
| !! | ATAATACAGGATTAAGTAAT+AGG | + | chr4.4:12269998-12270017 | MS.gene27938:intron | 20.0% |
| !! | ATATTGTAATAAGAGGAAAT+AGG | - | chr4.4:12268868-12268887 | None:intergenic | 20.0% |
| !! | ATGAAAGAAAATGATATATC+CGG | - | chr4.4:12268374-12268393 | None:intergenic | 20.0% |
| !! | ATTTATATGGAATGATTTCA+AGG | + | chr4.4:12270401-12270420 | MS.gene27938:intron | 20.0% |
| !! | GGTAATAATTAAACAAACAA+AGG | - | chr4.4:12268983-12269002 | None:intergenic | 20.0% |
| !! | GTTAAAAATAAGAAAGGTTA+AGG | - | chr4.4:12270787-12270806 | None:intergenic | 20.0% |
| !! | TAAAATAAGTAGATTGTACT+TGG | + | chr4.4:12268110-12268129 | MS.gene27938:intron | 20.0% |
| !! | TAATGTTGAATTCATTTGTT+TGG | + | chr4.4:12268160-12268179 | MS.gene27938:intron | 20.0% |
| !! | TATTGTAATAAGAGGAAATA+GGG | - | chr4.4:12268867-12268886 | None:intergenic | 20.0% |
| !! | TTGAATACATCTTAAAGTTA+TGG | - | chr4.4:12271520-12271539 | None:intergenic | 20.0% |
| !! | TTTACAAAAAATAACCAGTA+AGG | - | chr4.4:12270664-12270683 | None:intergenic | 20.0% |
| !!! | AACTTGTATATTTTACTGTT+AGG | + | chr4.4:12270289-12270308 | MS.gene27938:intron | 20.0% |
| !!! | ACTTTAAGATGTATTCAAAA+TGG | + | chr4.4:12271522-12271541 | MS.gene27938:intron | 20.0% |
| !!! | ATGATAGTCATTTTCAATTT+AGG | + | chr4.4:12268647-12268666 | MS.gene27938:intron | 20.0% |
| !!! | ATTTCCTTTCATTTTTCTTA+AGG | + | chr4.4:12271368-12271387 | MS.gene27938:intron | 20.0% |
| !!! | GCATATAATATTTGTTTTTG+AGG | + | chr4.4:12272672-12272691 | MS.gene27938:intron | 20.0% |
| !!! | GTAAAAATGATTTTTGAAAG+AGG | - | chr4.4:12270128-12270147 | None:intergenic | 20.0% |
| !!! | TAAATTTAAAAGTTTTGGGA+GGG | - | chr4.4:12269695-12269714 | None:intergenic | 20.0% |
| !!! | TATATCATTTTCTTTCATCA+AGG | + | chr4.4:12268376-12268395 | MS.gene27938:intron | 20.0% |
| !!! | TCATTTGGGTATTTTAAAAA+AGG | - | chr4.4:12268919-12268938 | None:intergenic | 20.0% |
| !!! | TGATAGTCATTTTCAATTTA+GGG | + | chr4.4:12268648-12268667 | MS.gene27938:intron | 20.0% |
| !!! | TGTTTTTGATAATATTCATC+AGG | - | chr4.4:12270370-12270389 | None:intergenic | 20.0% |
| !!! | TTAAATTTAAAAGTTTTGGG+AGG | - | chr4.4:12269696-12269715 | None:intergenic | 20.0% |
| !!! | TTGTAATTACTAGTTTTCTT+GGG | + | chr4.4:12270686-12270705 | MS.gene27938:intron | 20.0% |
| !!! | TTTACGTTGTTATTATTTAC+CGG | + | chr4.4:12272381-12272400 | MS.gene27938:intron | 20.0% |
| !!! | TTTGTAATTACTAGTTTTCT+TGG | + | chr4.4:12270685-12270704 | MS.gene27938:intron | 20.0% |
| ! | AAAGGAAAGATGAAAATACT+TGG | - | chr4.4:12271050-12271069 | None:intergenic | 25.0% |
| ! | AAATAAAGCCTAGAAAAATG+AGG | - | chr4.4:12272437-12272456 | None:intergenic | 25.0% |
| ! | AACTCAATTTCTCTAAACAA+GGG | + | chr4.4:12272894-12272913 | MS.gene27938:CDS | 25.0% |
| ! | ACAGAAAAATGCAATAATGT+TGG | + | chr4.4:12270214-12270233 | MS.gene27938:intron | 25.0% |
| ! | ACATCCTTAAGAAAAATGAA+AGG | - | chr4.4:12271375-12271394 | None:intergenic | 25.0% |
| ! | AGAGTTGAGAAAAAAAATAC+AGG | + | chr4.4:12271806-12271825 | MS.gene27938:intron | 25.0% |
| ! | ATATGCTTAGTAATCTTGTA+GGG | - | chr4.4:12272658-12272677 | None:intergenic | 25.0% |
| ! | ATTACCACTTTCTTAGATAA+TGG | + | chr4.4:12269527-12269546 | MS.gene27938:intron | 25.0% |
| ! | CTATCTAATAACGAGTAATT+AGG | + | chr4.4:12272171-12272190 | MS.gene27938:intron | 25.0% |
| ! | GAACTTTCTATATCCAATTA+GGG | + | chr4.4:12272193-12272212 | MS.gene27938:intron | 25.0% |
| ! | GGATGTATATTTGTTTCAAA+TGG | + | chr4.4:12271389-12271408 | MS.gene27938:intron | 25.0% |
| ! | GTTATCTATTTGATAGAAAC+TGG | + | chr4.4:12271425-12271444 | MS.gene27938:intron | 25.0% |
| ! | TATATGCTTAGTAATCTTGT+AGG | - | chr4.4:12272659-12272678 | None:intergenic | 25.0% |
| ! | TCTTGAGAGCAAAAAAATTA+AGG | + | chr4.4:12268943-12268962 | MS.gene27938:intron | 25.0% |
| ! | TGTAATGGTATATAAAGAGA+GGG | - | chr4.4:12271639-12271658 | None:intergenic | 25.0% |
| ! | TTCAAATCTAATGTCTTCTT+TGG | + | chr4.4:12273169-12273188 | MS.gene27938:intron | 25.0% |
| ! | TTGTAATGGTATATAAAGAG+AGG | - | chr4.4:12271640-12271659 | None:intergenic | 25.0% |
| !! | AACATTTTCCTATTATCCTA+TGG | + | chr4.4:12270942-12270961 | MS.gene27938:intron | 25.0% |
| !! | AATTGATAATTGAGAAACGT+TGG | - | chr4.4:12268027-12268046 | None:intergenic | 25.0% |
| !! | AGTATTTTCATCTTTCCTTT+TGG | + | chr4.4:12271050-12271069 | MS.gene27938:intron | 25.0% |
| !! | CTTTTCTTGAAGAAATGAAA+AGG | - | chr4.4:12268745-12268764 | None:intergenic | 25.0% |
| !! | GCTTAATATTTTATGCAGAT+TGG | - | chr4.4:12272945-12272964 | None:intergenic | 25.0% |
| !! | GTATATGTATGTGTTTTCAA+AGG | + | chr4.4:12272260-12272279 | MS.gene27938:intron | 25.0% |
| !! | TCAAACTACAAACTTTGAAA+AGG | - | chr4.4:12268304-12268323 | None:intergenic | 25.0% |
| !! | TCTTTAAGCTTTTTACCAAA+AGG | - | chr4.4:12271068-12271087 | None:intergenic | 25.0% |
| !!! | AATTTTGTTATGGCTTGTAA+TGG | - | chr4.4:12271654-12271673 | None:intergenic | 25.0% |
| !!! | ATAGTCATTTTCAATTTAGG+GGG | + | chr4.4:12268650-12268669 | MS.gene27938:intron | 25.0% |
| !!! | ATATTACTGACTTTTGCTTT+TGG | + | chr4.4:12270906-12270925 | MS.gene27938:intron | 25.0% |
| !!! | GATAGTCATTTTCAATTTAG+GGG | + | chr4.4:12268649-12268668 | MS.gene27938:intron | 25.0% |
| !!! | GTACATATTTTTTGCTGATA+AGG | + | chr4.4:12270423-12270442 | MS.gene27938:CDS | 25.0% |
| AAAGCCTTACATAATGAAAC+TGG | + | chr4.4:12272698-12272717 | MS.gene27938:intron | 30.0% | |
| AAATGTATAGATATAGGCAC+TGG | - | chr4.4:12272483-12272502 | None:intergenic | 30.0% | |
| AAGCCTTACATAATGAAACT+GGG | + | chr4.4:12272699-12272718 | MS.gene27938:intron | 30.0% | |
| ACTCAAATTAATCCTTGTAC+TGG | - | chr4.4:12268781-12268800 | None:intergenic | 30.0% | |
| ACTCATACTATAAGCACATA+CGG | - | chr4.4:12268709-12268728 | None:intergenic | 30.0% | |
| ACTTAAATATACACAGCTTC+TGG | + | chr4.4:12271000-12271019 | MS.gene27938:intron | 30.0% | |
| AGGAAACAAACAAAAAACAG+AGG | + | chr4.4:12271877-12271896 | MS.gene27938:intron | 30.0% | |
| AGGAAATGACTACAAGATAT+AGG | - | chr4.4:12271355-12271374 | None:intergenic | 30.0% | |
| AGGCATCATAATCATATACA+AGG | + | chr4.4:12268594-12268613 | MS.gene27938:intron | 30.0% | |
| ATAACTTGAAATACAGTCAG+TGG | + | chr4.4:12269819-12269838 | MS.gene27938:intron | 30.0% | |
| ATAAGTAGATTGTACTTGGA+TGG | + | chr4.4:12268114-12268133 | MS.gene27938:intron | 30.0% | |
| ATAATTACATGAACAGGTGA+TGG | + | chr4.4:12270569-12270588 | MS.gene27938:intron | 30.0% | |
| ATTATTACCTTTACTGTTGC+AGG | + | chr4.4:12268994-12269013 | MS.gene27938:intron | 30.0% | |
| CAAAATAACAGAGAAAGTAG+AGG | + | chr4.4:12271846-12271865 | MS.gene27938:intron | 30.0% | |
| CAATCTAATAACATAGGTTG+TGG | + | chr4.4:12269582-12269601 | MS.gene27938:intron | 30.0% | |
| CTAGCTTACATGACTTTAAT+GGG | + | chr4.4:12269356-12269375 | MS.gene27938:intron | 30.0% | |
| CTATCATGTATAAGAACCAT+AGG | - | chr4.4:12268634-12268653 | None:intergenic | 30.0% | |
| CTCAAATTAATCCTTGTACT+GGG | - | chr4.4:12268780-12268799 | None:intergenic | 30.0% | |
| GAAAAATGCAATAATGTTGG+TGG | + | chr4.4:12270217-12270236 | MS.gene27938:intron | 30.0% | |
| GAACTCAATTTCTCTAAACA+AGG | + | chr4.4:12272893-12272912 | MS.gene27938:CDS | 30.0% | |
| GAATCCATTATCTAAGAAAG+TGG | - | chr4.4:12269534-12269553 | None:intergenic | 30.0% | |
| GATCAACTAGCATAAGAAAA+TGG | - | chr4.4:12268074-12268093 | None:intergenic | 30.0% | |
| GATCTTATTGGAAAACCATA+TGG | + | chr4.4:12270609-12270628 | MS.gene27938:CDS | 30.0% | |
| GCATGTTTAGATACTTATCT+AGG | + | chr4.4:12269501-12269520 | MS.gene27938:intron | 30.0% | |
| GCTCTCAAGAAATATCATTT+GGG | - | chr4.4:12268933-12268952 | None:intergenic | 30.0% | |
| GGAACTTTCTATATCCAATT+AGG | + | chr4.4:12272192-12272211 | MS.gene27938:intron | 30.0% | |
| GGTACTAAATTGTTTAGACT+AGG | + | chr4.4:12271316-12271335 | MS.gene27938:intron | 30.0% | |
| GTCTAAACAATTTAGTACCT+TGG | - | chr4.4:12271315-12271334 | None:intergenic | 30.0% | |
| GTCTTCTTTGGTTGAAAATA+TGG | + | chr4.4:12273181-12273200 | MS.gene27938:intron | 30.0% | |
| GTTGGAAATATCATTTCTGA+AGG | + | chr4.4:12271178-12271197 | MS.gene27938:CDS | 30.0% | |
| TAATAAACTCCCTGATATGA+AGG | - | chr4.4:12272147-12272166 | None:intergenic | 30.0% | |
| TAATCCCTGTCAATGAAAAT+AGG | - | chr4.4:12268411-12268430 | None:intergenic | 30.0% | |
| TACTTACTTGTTCAGCATTT+CGG | - | chr4.4:12270270-12270289 | None:intergenic | 30.0% | |
| TAGAACTTCAACACTGTATT+AGG | - | chr4.4:12269472-12269491 | None:intergenic | 30.0% | |
| TATGCTTAGTAATCTTGTAG+GGG | - | chr4.4:12272657-12272676 | None:intergenic | 30.0% | |
| TCAAATTAATCCTTGTACTG+GGG | - | chr4.4:12268779-12268798 | None:intergenic | 30.0% | |
| TCTGTGCAATCTAATAACAT+AGG | + | chr4.4:12269576-12269595 | MS.gene27938:intron | 30.0% | |
| TGCTCTCAAGAAATATCATT+TGG | - | chr4.4:12268934-12268953 | None:intergenic | 30.0% | |
| TTACCCAGTTTCATTATGTA+AGG | - | chr4.4:12272705-12272724 | None:intergenic | 30.0% | |
| TTCTAAATTACAGCCCTAAT+TGG | - | chr4.4:12272209-12272228 | None:intergenic | 30.0% | |
| TTTCCAACTCCTATAGTTAT+AGG | - | chr4.4:12271166-12271185 | None:intergenic | 30.0% | |
| ! | ACATACACTATTGTCAGTTT+TGG | - | chr4.4:12271497-12271516 | None:intergenic | 30.0% |
| ! | ACTAGCTTACATGACTTTAA+TGG | + | chr4.4:12269355-12269374 | MS.gene27938:intron | 30.0% |
| ! | ACTTCTGAAAAAGTCAATTC+TGG | + | chr4.4:12272585-12272604 | MS.gene27938:intron | 30.0% |
| ! | ATGGTTTTTGCAAATTTTGC+AGG | + | chr4.4:12273506-12273525 | MS.gene27938:intron | 30.0% |
| ! | CTGTGATAATGTATCTTACT+TGG | - | chr4.4:12270510-12270529 | None:intergenic | 30.0% |
| ! | TATTTTATGCAGATTGGTAG+AGG | - | chr4.4:12272939-12272958 | None:intergenic | 30.0% |
| ! | TTTTGCAAATTTTGCAGGTT+GGG | + | chr4.4:12273511-12273530 | MS.gene27938:intron | 30.0% |
| ! | TTTTTGCAAATTTTGCAGGT+TGG | + | chr4.4:12273510-12273529 | MS.gene27938:intron | 30.0% |
| !! | AAATGAAAGTACCTCTTATC+CGG | - | chr4.4:12269624-12269643 | None:intergenic | 30.0% |
| !! | ACAGTTTTCCTCATTTTTCT+AGG | + | chr4.4:12272426-12272445 | MS.gene27938:intron | 30.0% |
| !! | ATTTTCTCAGGTTGTTACAA+AGG | + | chr4.4:12272990-12273009 | MS.gene27938:intron | 30.0% |
| !!! | ACTTTCTCTGTTATTTTGCT+TGG | - | chr4.4:12271844-12271863 | None:intergenic | 30.0% |
| !!! | TATCTTACTTGGCTACTTTT+GGG | - | chr4.4:12270499-12270518 | None:intergenic | 30.0% |
| !!! | TTCAGGTTTTTAAGTAGGAT+CGG | + | chr4.4:12271713-12271732 | MS.gene27938:intron | 30.0% |
| !!! | TTTTTCATTGATGATGTCTC+CGG | + | chr4.4:12271204-12271223 | MS.gene27938:CDS | 30.0% |
| AAAGAGAGGGAATGAGAAAT+GGG | - | chr4.4:12271626-12271645 | None:intergenic | 35.0% | |
| AACACTTGAGGTCAATTACT+TGG | - | chr4.4:12268344-12268363 | None:intergenic | 35.0% | |
| AAGAAAAACAGAGCAAACAG+AGG | + | chr4.4:12271917-12271936 | MS.gene27938:intron | 35.0% | |
| AAGAGTGGTTAAAAAGATCG+TGG | - | chr4.4:12271596-12271615 | None:intergenic | 35.0% | |
| AATAAGTTGCGAGTTATCCA+AGG | + | chr4.4:12271295-12271314 | MS.gene27938:CDS | 35.0% | |
| AATGTGTAACAGAATGGACA+TGG | - | chr4.4:12272078-12272097 | None:intergenic | 35.0% | |
| ACAACCTGAGAAAATCAGAA+TGG | - | chr4.4:12272985-12273004 | None:intergenic | 35.0% | |
| ACCTCAAGTGTTAATGAATC+CGG | + | chr4.4:12268352-12268371 | MS.gene27938:intron | 35.0% | |
| AGAAAGTAGAGGAAAAACAG+AGG | + | chr4.4:12271857-12271876 | MS.gene27938:intron | 35.0% | |
| AGAAATTGAGTTCCATAGAC+AGG | - | chr4.4:12272886-12272905 | None:intergenic | 35.0% | |
| AGAGTGGTTAAAAAGATCGT+GGG | - | chr4.4:12271595-12271614 | None:intergenic | 35.0% | |
| ATAAGAGCAATGCATTCACA+AGG | + | chr4.4:12269665-12269684 | MS.gene27938:intron | 35.0% | |
| ATATCTATAGTTCGAGCTGT+TGG | - | chr4.4:12270069-12270088 | None:intergenic | 35.0% | |
| ATCCATGCCTTTCTTACTTA+GGG | - | chr4.4:12270883-12270902 | None:intergenic | 35.0% | |
| ATCGGTTGGCAGAAAATTAA+TGG | + | chr4.4:12273487-12273506 | MS.gene27938:intron | 35.0% | |
| ATCTCTAACTGAAATCCCTA+GGG | + | chr4.4:12270021-12270040 | MS.gene27938:intron | 35.0% | |
| ATGTCCATTCTGTTACACAT+TGG | + | chr4.4:12272077-12272096 | MS.gene27938:intron | 35.0% | |
| ATTGTTGGAGACAACATCAT+TGG | + | chr4.4:12273627-12273646 | MS.gene27938:CDS | 35.0% | |
| CGGTTTATTGAAATCGATAC+AGG | - | chr4.4:12272330-12272349 | None:intergenic | 35.0% | |
| GAAAAAATTACCCCAGTACA+AGG | + | chr4.4:12268766-12268785 | MS.gene27938:intron | 35.0% | |
| GATAAGCAGCCTATAACTAT+AGG | + | chr4.4:12271154-12271173 | MS.gene27938:CDS | 35.0% | |
| GATACTTCCCTAAGTAAGAA+AGG | + | chr4.4:12270873-12270892 | MS.gene27938:intron | 35.0% | |
| GTGAAAGATCGTAAAAACGA+GGG | + | chr4.4:12271743-12271762 | MS.gene27938:intron | 35.0% | |
| TAAAGAGAGGGAATGAGAAA+TGG | - | chr4.4:12271627-12271646 | None:intergenic | 35.0% | |
| TAACAACGTAAAACGGAACA+TGG | - | chr4.4:12272373-12272392 | None:intergenic | 35.0% | |
| TATCACTGTGGATGGAAAAA+AGG | + | chr4.4:12273106-12273125 | MS.gene27938:CDS | 35.0% | |
| TATCCATGCCTTTCTTACTT+AGG | - | chr4.4:12270884-12270903 | None:intergenic | 35.0% | |
| TATGTAAAAGAGGTAGCCAT+AGG | - | chr4.4:12270961-12270980 | None:intergenic | 35.0% | |
| TCCATACAGTGTAAGCAATT+GGG | + | chr4.4:12269740-12269759 | MS.gene27938:intron | 35.0% | |
| TCTCTCGTACAAGATATATC+TGG | + | chr4.4:12270720-12270739 | MS.gene27938:intron | 35.0% | |
| TCTTAAACAGAAGCCAAGTT+CGG | - | chr4.4:12272615-12272634 | None:intergenic | 35.0% | |
| TGATTGTATCTTGACTTCTC+AGG | + | chr4.4:12272810-12272829 | MS.gene27938:intron | 35.0% | |
| TGTATAAGAACCATAGGTGT+AGG | - | chr4.4:12268628-12268647 | None:intergenic | 35.0% | |
| TTATGTAAGCTTCACCTTAC+TGG | + | chr4.4:12270647-12270666 | MS.gene27938:intron | 35.0% | |
| TTGAACGTAGGTGATCTTAT+TGG | + | chr4.4:12270597-12270616 | MS.gene27938:CDS | 35.0% | |
| TTTGCACGAACATCTTCATT+TGG | + | chr4.4:12269177-12269196 | MS.gene27938:intron | 35.0% | |
| ! | AAATGTTGATGAGTGCCATA+TGG | - | chr4.4:12270627-12270646 | None:intergenic | 35.0% |
| ! | AAATTGACTAGTTACACCTC+TGG | + | chr4.4:12273534-12273553 | MS.gene27938:CDS | 35.0% |
| ! | CAAGATTTTGAACTACCAGA+TGG | - | chr4.4:12273693-12273712 | None:intergenic | 35.0% |
| ! | GCAAACGAGCTTATTTGTTT+TGG | + | chr4.4:12270468-12270487 | MS.gene27938:CDS | 35.0% |
| ! | GGAAATATCATTTCTGAAGG+TGG | + | chr4.4:12271181-12271200 | MS.gene27938:CDS | 35.0% |
| ! | TAGTCCATTCTGATTTTCTC+AGG | + | chr4.4:12272978-12272997 | MS.gene27938:intron | 35.0% |
| ! | TATTTTATTCAAGCCACAGC+AGG | + | chr4.4:12272452-12272471 | MS.gene27938:intron | 35.0% |
| ! | TTATAACTGCAGTTTTCGCA+AGG | - | chr4.4:12273241-12273260 | None:intergenic | 35.0% |
| ! | TTGGGAGGGAAATTTTGTTA+TGG | - | chr4.4:12271664-12271683 | None:intergenic | 35.0% |
| !! | AAGTTCTGAATCCTATCTCA+CGG | - | chr4.4:12268520-12268539 | None:intergenic | 35.0% |
| !! | ATCAGAATGGACTAAGTATC+AGG | - | chr4.4:12272972-12272991 | None:intergenic | 35.0% |
| !! | GTATCTTACTTGGCTACTTT+TGG | - | chr4.4:12270500-12270519 | None:intergenic | 35.0% |
| !! | TACATGACTTTAATGGGCTT+GGG | + | chr4.4:12269362-12269381 | MS.gene27938:intron | 35.0% |
| !! | TTACATGACTTTAATGGGCT+TGG | + | chr4.4:12269361-12269380 | MS.gene27938:intron | 35.0% |
| !!! | TCAGGTTCAGGTTTTTAAGT+AGG | + | chr4.4:12271708-12271727 | MS.gene27938:intron | 35.0% |
| AAAAACAGTGTCACATCCCT+AGG | - | chr4.4:12270040-12270059 | None:intergenic | 40.0% | |
| AAAACAGTGTCACATCCCTA+GGG | - | chr4.4:12270039-12270058 | None:intergenic | 40.0% | |
| AAACCTGAACCTGACTACAT+TGG | - | chr4.4:12271702-12271721 | None:intergenic | 40.0% | |
| AAGAGAGGGAATGAGAAATG+GGG | - | chr4.4:12271625-12271644 | None:intergenic | 40.0% | |
| AATAGTGAAGATGGAGACCA+TGG | - | chr4.4:12267855-12267874 | None:intergenic | 40.0% | |
| ACCTGGTAGTATTATCACTG+TGG | + | chr4.4:12273094-12273113 | MS.gene27938:CDS | 40.0% | |
| AGAATAGCTTTCCAGACAGA+TGG | - | chr4.4:12271238-12271257 | None:intergenic | 40.0% | |
| AGACGCTGTTGAGAAAGAAA+AGG | - | chr4.4:12273669-12273688 | None:intergenic | 40.0% | |
| AGAGGTAGCCATAGGATAAT+AGG | - | chr4.4:12270953-12270972 | None:intergenic | 40.0% | |
| AGGGAACTGTAGGATTACAA+AGG | - | chr4.4:12273462-12273481 | None:intergenic | 40.0% | |
| AGTTGTGAGAATGACAGAGT+CGG | + | chr4.4:12270535-12270554 | MS.gene27938:intron | 40.0% | |
| ATCGTGCTTCAACTTTACTC+AGG | - | chr4.4:12271962-12271981 | None:intergenic | 40.0% | |
| ATGACACGATTGAGCATGTA+AGG | - | chr4.4:12270818-12270837 | None:intergenic | 40.0% | |
| ATGGAGTCAAACAGAGGTTA+TGG | + | chr4.4:12273045-12273064 | MS.gene27938:CDS | 40.0% | |
| CAGCCTATAACTATAGGAGT+TGG | + | chr4.4:12271160-12271179 | MS.gene27938:CDS | 40.0% | |
| CATTCAGAACAAGATATCCC+TGG | + | chr4.4:12271547-12271566 | MS.gene27938:intron | 40.0% | |
| CCCTGTCAATGAAAATAGGA+GGG | - | chr4.4:12268407-12268426 | None:intergenic | 40.0% | |
| CTAGCACTAAAAGCCTTCAT+GGG | - | chr4.4:12272527-12272546 | None:intergenic | 40.0% | |
| CTATAGATATTGCACATGCG+TGG | + | chr4.4:12270079-12270098 | MS.gene27938:CDS | 40.0% | |
| CTTCGAAGGTTGAAGTAAGA+TGG | - | chr4.4:12267828-12267847 | None:intergenic | 40.0% | |
| CTTGTTCAGCATTTCGGTAA+TGG | - | chr4.4:12270264-12270283 | None:intergenic | 40.0% | |
| GAAAGCTATTCTTGCTCAAG+GGG | + | chr4.4:12271246-12271265 | MS.gene27938:CDS | 40.0% | |
| GAAATCGATACAGGCCTATA+GGG | - | chr4.4:12272321-12272340 | None:intergenic | 40.0% | |
| GAAGGAGACAGTGTAATTGT+TGG | + | chr4.4:12273612-12273631 | MS.gene27938:CDS | 40.0% | |
| GAGAACATGCATTTAGCTAC+AGG | - | chr4.4:12269151-12269170 | None:intergenic | 40.0% | |
| GATAATACTACCAGGTTCTG+CGG | - | chr4.4:12273090-12273109 | None:intergenic | 40.0% | |
| GATCTCTAACTGAAATCCCT+AGG | + | chr4.4:12270020-12270039 | MS.gene27938:intron | 40.0% | |
| GGAAAGCTATTCTTGCTCAA+GGG | + | chr4.4:12271245-12271264 | MS.gene27938:CDS | 40.0% | |
| GGGCTGTAATTTAGAAGTCT+TGG | + | chr4.4:12272213-12272232 | MS.gene27938:intron | 40.0% | |
| GGTAGTATTATCACTGTGGA+TGG | + | chr4.4:12273098-12273117 | MS.gene27938:CDS | 40.0% | |
| GGTGAAAGATCGTAAAAACG+AGG | + | chr4.4:12271742-12271761 | MS.gene27938:intron | 40.0% | |
| GGTTCCAATGTGTAACAGAA+TGG | - | chr4.4:12272084-12272103 | None:intergenic | 40.0% | |
| GGTTTGAGGAATAGTGAAGA+TGG | - | chr4.4:12267864-12267883 | None:intergenic | 40.0% | |
| GTAAAGTTGAAGCACGATTG+AGG | + | chr4.4:12271964-12271983 | MS.gene27938:intron | 40.0% | |
| GTCCATACAGTGTAAGCAAT+TGG | + | chr4.4:12269739-12269758 | MS.gene27938:intron | 40.0% | |
| GTGAATGCATTGCTCTTATG+TGG | - | chr4.4:12269664-12269683 | None:intergenic | 40.0% | |
| GTTGTGGATCTTTCACACTT+CGG | + | chr4.4:12269598-12269617 | MS.gene27938:CDS | 40.0% | |
| TACTAAAATGGCCGTGAGAT+AGG | + | chr4.4:12268506-12268525 | MS.gene27938:intron | 40.0% | |
| TCCACAGTGATAATACTACC+AGG | - | chr4.4:12273098-12273117 | None:intergenic | 40.0% | |
| TCCATCATATGTTATGAGCC+TGG | - | chr4.4:12273030-12273049 | None:intergenic | 40.0% | |
| TCCCAATTGCTTACACTGTA+TGG | - | chr4.4:12269744-12269763 | None:intergenic | 40.0% | |
| TCCCTGTCAATGAAAATAGG+AGG | - | chr4.4:12268408-12268427 | None:intergenic | 40.0% | |
| TCCGGATTCATTAACACTTG+AGG | - | chr4.4:12268356-12268375 | None:intergenic | 40.0% | |
| TCGCAAGGTATGGTTCAATT+GGG | - | chr4.4:12273226-12273245 | None:intergenic | 40.0% | |
| TCTAGCACTAAAAGCCTTCA+TGG | - | chr4.4:12272528-12272547 | None:intergenic | 40.0% | |
| TCTTGTTCTTCTTGTTGCGT+TGG | - | chr4.4:12267920-12267939 | None:intergenic | 40.0% | |
| TGAAATCGATACAGGCCTAT+AGG | - | chr4.4:12272322-12272341 | None:intergenic | 40.0% | |
| TGCATTGCTCTTATGTGGAA+AGG | - | chr4.4:12269659-12269678 | None:intergenic | 40.0% | |
| TGGAAAGCTATTCTTGCTCA+AGG | + | chr4.4:12271244-12271263 | MS.gene27938:CDS | 40.0% | |
| TGGAAATTACCAAGAAGTCG+TGG | - | chr4.4:12268007-12268026 | None:intergenic | 40.0% | |
| TGGAGTCAAACAGAGGTTAT+GGG | + | chr4.4:12273046-12273065 | MS.gene27938:CDS | 40.0% | |
| TGTATCTTGACTTCTCAGGA+AGG | + | chr4.4:12272814-12272833 | MS.gene27938:intron | 40.0% | |
| TTACTGTTAGGATTCTCCGA+CGG | + | chr4.4:12270301-12270320 | MS.gene27938:intron | 40.0% | |
| TTCCCTAAGTAAGAAAGGCA+TGG | + | chr4.4:12270878-12270897 | MS.gene27938:intron | 40.0% | |
| TTCGCAAGGTATGGTTCAAT+TGG | - | chr4.4:12273227-12273246 | None:intergenic | 40.0% | |
| TTGGGAGTAAACAAGGTTTG+AGG | - | chr4.4:12267878-12267897 | None:intergenic | 40.0% | |
| ! | AGATGTGGAGAAACTTTTGC+CGG | - | chr4.4:12272403-12272422 | None:intergenic | 40.0% |
| ! | ATTTTCGGTTTAACCTCCGT+CGG | - | chr4.4:12270320-12270339 | None:intergenic | 40.0% |
| ! | CATATGATGGAGTCAAACAG+AGG | + | chr4.4:12273039-12273058 | MS.gene27938:CDS | 40.0% |
| ! | CCCTCCTATTTTCATTGACA+GGG | + | chr4.4:12268404-12268423 | MS.gene27938:intron | 40.0% |
| ! | GTATGTGTTTTCAAAGGCTC+TGG | + | chr4.4:12272266-12272285 | MS.gene27938:intron | 40.0% |
| ! | TCATAACGATGAAGAAGCAC+TGG | + | chr4.4:12269072-12269091 | MS.gene27938:CDS | 40.0% |
| ! | TCGGATTAGGTTACATCAAG+AGG | + | chr4.4:12273577-12273596 | MS.gene27938:CDS | 40.0% |
| ! | TTGCAATGGGTTCTAATGCT+TGG | + | chr4.4:12271272-12271291 | MS.gene27938:CDS | 40.0% |
| !! | AATGGACTAAGTATCAGGCA+AGG | - | chr4.4:12272967-12272986 | None:intergenic | 40.0% |
| !! | CAGAGTACTGCAAACTTTGA+GGG | + | chr4.4:12269870-12269889 | MS.gene27938:CDS | 40.0% |
| !! | TGCTGACTCATTGTACAAGA+TGG | - | chr4.4:12273416-12273435 | None:intergenic | 40.0% |
| !! | TTTGCTTTTGGCAACGCTTT+TGG | + | chr4.4:12270918-12270937 | MS.gene27938:intron | 40.0% |
| !!! | ACGAGCTTATTTGTTTTGGC+AGG | + | chr4.4:12270472-12270491 | MS.gene27938:CDS | 40.0% |
| !!! | GGTTTTTAAGTAGGATCGGT+AGG | + | chr4.4:12271717-12271736 | MS.gene27938:intron | 40.0% |
| AAACGAATTCAACGTCCTGG+AGG | + | chr4.4:12272860-12272879 | MS.gene27938:CDS | 45.0% | |
| ACAATGCCTCTCAAAAGCCA+GGG | - | chr4.4:12271567-12271586 | None:intergenic | 45.0% | |
| ACAGTGTCCTGCAACAGTAA+AGG | - | chr4.4:12269004-12269023 | None:intergenic | 45.0% | |
| ATACAGGCCTATAGGGAGAT+GGG | - | chr4.4:12272314-12272333 | None:intergenic | 45.0% | |
| ATTATGATGCCTACGAGTCG+AGG | - | chr4.4:12268586-12268605 | None:intergenic | 45.0% | |
| CACAAACGAATTCAACGTCC+TGG | + | chr4.4:12272857-12272876 | MS.gene27938:CDS | 45.0% | |
| CCGAGATAGTTTGGAGGTTA+CGG | - | chr4.4:12272350-12272369 | None:intergenic | 45.0% | |
| CCGTAACCTCCAAACTATCT+CGG | + | chr4.4:12272347-12272366 | MS.gene27938:intron | 45.0% | |
| CCTACAGTTCCCTCTTGAAT+CGG | + | chr4.4:12273469-12273488 | MS.gene27938:intron | 45.0% | |
| CCTCAAAGTTTGCAGTACTC+TGG | - | chr4.4:12269872-12269891 | None:intergenic | 45.0% | |
| CTGAGGTTTGGGAGTAAACA+AGG | - | chr4.4:12267885-12267904 | None:intergenic | 45.0% | |
| GAAATGGGGAAGGAAAAGAG+TGG | - | chr4.4:12271611-12271630 | None:intergenic | 45.0% | |
| GAAATGTGTCTAGCCCATGA+AGG | + | chr4.4:12272511-12272530 | MS.gene27938:intron | 45.0% | |
| GAGGAAAACTGTCACAGATG+TGG | - | chr4.4:12272418-12272437 | None:intergenic | 45.0% | |
| GATTCGTAAGTAGGATCGGT+AGG | + | chr4.4:12271775-12271794 | MS.gene27938:intron | 45.0% | |
| GCACGATTCGTAAGTAGGAT+CGG | + | chr4.4:12271771-12271790 | MS.gene27938:intron | 45.0% | |
| GCCAGGCTCATAACATATGA+TGG | + | chr4.4:12273026-12273045 | MS.gene27938:CDS | 45.0% | |
| GCTTGGGATGATATTAGCTC+AGG | + | chr4.4:12269378-12269397 | MS.gene27938:intron | 45.0% | |
| GGAGAACAGAAGGGATGTAT+AGG | - | chr4.4:12272113-12272132 | None:intergenic | 45.0% | |
| GGAGTCAAACAGAGGTTATG+GGG | + | chr4.4:12273047-12273066 | MS.gene27938:CDS | 45.0% | |
| TACAACAACCCCATTGTCTG+CGG | - | chr4.4:12269101-12269120 | None:intergenic | 45.0% | |
| TACAATGCCTCTCAAAAGCC+AGG | - | chr4.4:12271568-12271587 | None:intergenic | 45.0% | |
| TATTGCACATGCGTGGATCA+TGG | + | chr4.4:12270086-12270105 | MS.gene27938:CDS | 45.0% | |
| TCGTAGCACGATTCGTAAGT+AGG | + | chr4.4:12271766-12271785 | MS.gene27938:intron | 45.0% | |
| TGGTGGCAAACAGAGGATTT+GGG | - | chr4.4:12271682-12271701 | None:intergenic | 45.0% | |
| TGGTTTCAGCAGAGACTTGT+AGG | + | chr4.4:12270237-12270256 | MS.gene27938:CDS | 45.0% | |
| TGTTTGCCACCAATGTAGTC+AGG | + | chr4.4:12271690-12271709 | MS.gene27938:intron | 45.0% | |
| TTGCAGTACTCTGGTTGTGA+AGG | - | chr4.4:12269863-12269882 | None:intergenic | 45.0% | |
| TTGTAGGGGAATACGAACAC+TGG | - | chr4.4:12272643-12272662 | None:intergenic | 45.0% | |
| TTTAAGTAGGATCGGTAGGC+TGG | + | chr4.4:12271721-12271740 | MS.gene27938:intron | 45.0% | |
| TTTCCAACCCATCTCCCTAT+AGG | + | chr4.4:12272304-12272323 | MS.gene27938:intron | 45.0% | |
| ! | ACTACATTGGTGGCAAACAG+AGG | - | chr4.4:12271689-12271708 | None:intergenic | 45.0% |
| ! | ACTGCAGTTTTCGCAAGGTA+TGG | - | chr4.4:12273236-12273255 | None:intergenic | 45.0% |
| ! | CTCAGGTTGTTACAAAGGAC+AGG | + | chr4.4:12272995-12273014 | MS.gene27938:intron | 45.0% |
| ! | GCCCTCCTATTTTCATTGAC+AGG | + | chr4.4:12268403-12268422 | MS.gene27938:intron | 45.0% |
| ! | GTGAGCAGAATCTGAGGTTT+GGG | - | chr4.4:12267896-12267915 | None:intergenic | 45.0% |
| ! | GTGATGGAAAGCTTGAACGT+AGG | + | chr4.4:12270585-12270604 | MS.gene27938:CDS | 45.0% |
| ! | TGACTAGTTACACCTCTGGA+AGG | + | chr4.4:12273538-12273557 | MS.gene27938:CDS | 45.0% |
| ! | TGCAAACTTTGAGGGTCTAC+AGG | + | chr4.4:12269878-12269897 | MS.gene27938:CDS | 45.0% |
| ! | TGTGAGCAGAATCTGAGGTT+TGG | - | chr4.4:12267897-12267916 | None:intergenic | 45.0% |
| ! | TTCTGCCAACCGATTCAAGA+GGG | - | chr4.4:12273481-12273500 | None:intergenic | 45.0% |
| ! | TTGGTGGCAAACAGAGGATT+TGG | - | chr4.4:12271683-12271702 | None:intergenic | 45.0% |
| ! | TTTCTGCCAACCGATTCAAG+AGG | - | chr4.4:12273482-12273501 | None:intergenic | 45.0% |
| !! | AGATATCCCTGGCTTTTGAG+AGG | + | chr4.4:12271558-12271577 | MS.gene27938:intron | 45.0% |
| !! | ATAGGGAGATGGGTTGGAAA+CGG | - | chr4.4:12272304-12272323 | None:intergenic | 45.0% |
| !! | CCAGAGTACTGCAAACTTTG+AGG | + | chr4.4:12269869-12269888 | MS.gene27938:CDS | 45.0% |
| !! | CCATTTTAGTAGCTGAGGTG+GGG | - | chr4.4:12268497-12268516 | None:intergenic | 45.0% |
| !! | GCCATTTTAGTAGCTGAGGT+GGG | - | chr4.4:12268498-12268517 | None:intergenic | 45.0% |
| !!! | ATATTTAAATTTAAAAGTTT+TGG | - | chr4.4:12269700-12269719 | None:intergenic | 5.0% |
| !!! | TATTTAAATTTAAAAGTTTT+GGG | - | chr4.4:12269699-12269718 | None:intergenic | 5.0% |
| AAGAGGCAAGCTGCTTCAGA+AGG | + | chr4.4:12273594-12273613 | MS.gene27938:CDS | 50.0% | |
| AAGGACAGGAGACTATAGCC+AGG | + | chr4.4:12273009-12273028 | MS.gene27938:CDS | 50.0% | |
| ACAATGAGTCAGCACGCTAG+TGG | + | chr4.4:12273422-12273441 | MS.gene27938:intron | 50.0% | |
| ACATGGCCGAGATAGTTTGG+AGG | - | chr4.4:12272356-12272375 | None:intergenic | 50.0% | |
| ACCAAGAAGTCGTGGTCGAT+GGG | - | chr4.4:12267999-12268018 | None:intergenic | 50.0% | |
| AGGAAGCCATCGGAACACTT+CGG | + | chr4.4:12273558-12273577 | MS.gene27938:CDS | 50.0% | |
| CAGGACACTGTCAAAACTGC+AGG | + | chr4.4:12269013-12269032 | MS.gene27938:intron | 50.0% | |
| CAGTTCCCTCTTGAATCGGT+TGG | + | chr4.4:12273473-12273492 | MS.gene27938:intron | 50.0% | |
| CCACCAATGTAGTCAGGTTC+AGG | + | chr4.4:12271696-12271715 | MS.gene27938:intron | 50.0% | |
| CCATCGGAACACTTCGGATT+AGG | + | chr4.4:12273564-12273583 | MS.gene27938:CDS | 50.0% | |
| CCCCACCTCAGCTACTAAAA+TGG | + | chr4.4:12268494-12268513 | MS.gene27938:intron | 50.0% | |
| CCGATTCAAGAGGGAACTGT+AGG | - | chr4.4:12273472-12273491 | None:intergenic | 50.0% | |
| CCTGAACCTGACTACATTGG+TGG | - | chr4.4:12271699-12271718 | None:intergenic | 50.0% | |
| GAGGGAATGAGAAATGGGGA+AGG | - | chr4.4:12271621-12271640 | None:intergenic | 50.0% | |
| GATACAGGCCTATAGGGAGA+TGG | - | chr4.4:12272315-12272334 | None:intergenic | 50.0% | |
| GCGTCGCAATCATTGTAGTC+AGG | - | chr4.4:12272036-12272055 | None:intergenic | 50.0% | |
| GGAACATGGCCGAGATAGTT+TGG | - | chr4.4:12272359-12272378 | None:intergenic | 50.0% | |
| GGATCGAGAACCTACACCTA+TGG | + | chr4.4:12268615-12268634 | MS.gene27938:intron | 50.0% | |
| GGCAAACAGAGGATTTGGGA+GGG | - | chr4.4:12271678-12271697 | None:intergenic | 50.0% | |
| GTGAAGATGGAGACCATGGT+TGG | - | chr4.4:12267851-12267870 | None:intergenic | 50.0% | |
| GTTGGTGTGAGCAGAATCTG+AGG | - | chr4.4:12267902-12267921 | None:intergenic | 50.0% | |
| TACCAAGAAGTCGTGGTCGA+TGG | - | chr4.4:12268000-12268019 | None:intergenic | 50.0% | |
| TAGCGCGCACCTTCATATCA+GGG | + | chr4.4:12272135-12272154 | MS.gene27938:intron | 50.0% | |
| TCAACCTTCGAAGCCAACCA+TGG | + | chr4.4:12267835-12267854 | MS.gene27938:CDS | 50.0% | |
| TCGTTCGATCCTACATCCCA+AGG | - | chr4.4:12271992-12272011 | None:intergenic | 50.0% | |
| TCGTTTGTGAGCTCCATTCC+AGG | - | chr4.4:12272846-12272865 | None:intergenic | 50.0% | |
| TGGATCTTTCACACTTCGGC+CGG | + | chr4.4:12269602-12269621 | MS.gene27938:CDS | 50.0% | |
| TGGCAAACAGAGGATTTGGG+AGG | - | chr4.4:12271679-12271698 | None:intergenic | 50.0% | |
| TTGTAGTCAGGATCGAGTGC+TGG | - | chr4.4:12272024-12272043 | None:intergenic | 50.0% | |
| ! | AACTTTGAGGGTCTACAGGC+AGG | + | chr4.4:12269882-12269901 | MS.gene27938:CDS | 50.0% |
| ! | AAGCACGATTGAGGTGCCTT+GGG | + | chr4.4:12271973-12271992 | MS.gene27938:intron | 50.0% |
| ! | ACTTTGAGGGTCTACAGGCA+GGG | + | chr4.4:12269883-12269902 | MS.gene27938:CDS | 50.0% |
| ! | ATTGAGGTGCCTTGGGATGT+AGG | + | chr4.4:12271980-12271999 | MS.gene27938:intron | 50.0% |
| ! | CCTAATCCGAAGTGTTCCGA+TGG | - | chr4.4:12273567-12273586 | None:intergenic | 50.0% |
| ! | TCATAAGCTCCTCGACTCGT+AGG | + | chr4.4:12268574-12268593 | MS.gene27938:intron | 50.0% |
| ! | TTTTAGTAGCTGAGGTGGGG+AGG | - | chr4.4:12268494-12268513 | None:intergenic | 50.0% |
| !! | AGGATCGAGTGCTGGTTTGT+AGG | - | chr4.4:12272016-12272035 | None:intergenic | 50.0% |
| !! | CAATTCTGGAGTGCCGAACT+TGG | + | chr4.4:12272599-12272618 | MS.gene27938:intron | 50.0% |
| !! | CACGGCCATTTTAGTAGCTG+AGG | - | chr4.4:12268502-12268521 | None:intergenic | 50.0% |
| !! | GGCCATTTTAGTAGCTGAGG+TGG | - | chr4.4:12268499-12268518 | None:intergenic | 50.0% |
| AAGAAGTCGTGGTCGATGGG+TGG | - | chr4.4:12267996-12268015 | None:intergenic | 55.0% | |
| ACCCATCGACCACGACTTCT+TGG | + | chr4.4:12267995-12268014 | MS.gene27938:CDS | 55.0% | |
| ACTGGATGCCGCAGACAATG+GGG | + | chr4.4:12269090-12269109 | MS.gene27938:CDS | 55.0% | |
| AGGCCTATAGGGAGATGGGT+TGG | - | chr4.4:12272310-12272329 | None:intergenic | 55.0% | |
| AGTTCCATAGACAGGCCTCC+AGG | - | chr4.4:12272878-12272897 | None:intergenic | 55.0% | |
| CACTGGATGCCGCAGACAAT+GGG | + | chr4.4:12269089-12269108 | MS.gene27938:CDS | 55.0% | |
| CGCGCTACTGGAGAACAGAA+GGG | - | chr4.4:12272122-12272141 | None:intergenic | 55.0% | |
| CTACAGGCAGGGCAAGTATG+TGG | + | chr4.4:12269894-12269913 | MS.gene27938:intron | 55.0% | |
| CTGTTAGGATTCTCCGACGG+AGG | + | chr4.4:12270304-12270323 | MS.gene27938:intron | 55.0% | |
| GATCCCTTCCCCAGAAACCT+CGG | - | chr4.4:12269041-12269060 | None:intergenic | 55.0% | |
| GCTCAAGGGGCTGTTGCAAT+GGG | + | chr4.4:12271259-12271278 | MS.gene27938:CDS | 55.0% | |
| GTAGCGCGCACCTTCATATC+AGG | + | chr4.4:12272134-12272153 | MS.gene27938:intron | 55.0% | |
| TCACACTTCGGCCGGATAAG+AGG | + | chr4.4:12269610-12269629 | MS.gene27938:CDS | 55.0% | |
| TCTCAACAGCGTCTGCCATC+TGG | + | chr4.4:12273675-12273694 | MS.gene27938:CDS | 55.0% | |
| TGCTCAAGGGGCTGTTGCAA+TGG | + | chr4.4:12271258-12271277 | MS.gene27938:CDS | 55.0% | |
| TTCCGATGGCTTCCTTCCAG+AGG | - | chr4.4:12273553-12273572 | None:intergenic | 55.0% | |
| ! | CACCTCTGGAAGGAAGCCAT+CGG | + | chr4.4:12273548-12273567 | MS.gene27938:CDS | 55.0% |
| ! | GAAGCACGATTGAGGTGCCT+TGG | + | chr4.4:12271972-12271991 | MS.gene27938:intron | 55.0% |
| ! | GATATGAAGGTGCGCGCTAC+TGG | - | chr4.4:12272134-12272153 | None:intergenic | 55.0% |
| ! | TGTCAAAACTGCAGGTGCCG+AGG | + | chr4.4:12269021-12269040 | MS.gene27938:CDS | 55.0% |
| !! | GAGACCATGGTTGGCTTCGA+AGG | - | chr4.4:12267842-12267861 | None:intergenic | 55.0% |
| AAGTCGTGGTCGATGGGTGG+AGG | - | chr4.4:12267993-12268012 | None:intergenic | 60.0% | |
| ACGTCCTGGAGGCCTGTCTA+TGG | + | chr4.4:12272871-12272890 | MS.gene27938:CDS | 60.0% | |
| AGGAAGGCCTGCTCCTGGAA+TGG | + | chr4.4:12272830-12272849 | MS.gene27938:intron | 60.0% | |
| AGTCGTGGTCGATGGGTGGA+GGG | - | chr4.4:12267992-12268011 | None:intergenic | 60.0% | |
| CAGACAGATGGAGCAGCTGC+CGG | - | chr4.4:12271226-12271245 | None:intergenic | 60.0% | |
| CTTTCTGCAGCCGCAGAACC+TGG | + | chr4.4:12273077-12273096 | MS.gene27938:CDS | 60.0% | |
| GCACTGGATGCCGCAGACAA+TGG | + | chr4.4:12269088-12269107 | MS.gene27938:CDS | 60.0% | |
| GCGCGCTACTGGAGAACAGA+AGG | - | chr4.4:12272123-12272142 | None:intergenic | 60.0% | |
| GTGAGCTCCATTCCAGGAGC+AGG | - | chr4.4:12272840-12272859 | None:intergenic | 60.0% | |
| TTCTCAGGAAGGCCTGCTCC+TGG | + | chr4.4:12272825-12272844 | MS.gene27938:intron | 60.0% | |
| ! | GTGCCGAGGTTTCTGGGGAA+GGG | + | chr4.4:12269035-12269054 | MS.gene27938:CDS | 60.0% |
| !! | ACTGCAGGTGCCGAGGTTTC+TGG | + | chr4.4:12269028-12269047 | MS.gene27938:CDS | 60.0% |
| !! | CTGCAGGTGCCGAGGTTTCT+GGG | + | chr4.4:12269029-12269048 | MS.gene27938:CDS | 60.0% |
| !! | GGCACTGGTAGTACCTGCTG+TGG | - | chr4.4:12272468-12272487 | None:intergenic | 60.0% |
| !! | TGCAGGTGCCGAGGTTTCTG+GGG | + | chr4.4:12269030-12269049 | MS.gene27938:CDS | 60.0% |
| CGGCAGCTGCTCCATCTGTC+TGG | + | chr4.4:12271224-12271243 | MS.gene27938:CDS | 65.0% | |
| GGTCGATGGGTGGAGGGGAA+AGG | - | chr4.4:12267986-12268005 | None:intergenic | 65.0% | |
| GTCGTGGTCGATGGGTGGAG+GGG | - | chr4.4:12267991-12268010 | None:intergenic | 65.0% | |
| ! | GGTGCCGAGGTTTCTGGGGA+AGG | + | chr4.4:12269034-12269053 | MS.gene27938:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 12267807 | 12273713 | 12267807 | ID=MS.gene27938 |
| chr4.4 | mRNA | 12267807 | 12273713 | 12267807 | ID=MS.gene27938.t1;Parent=MS.gene27938 |
| chr4.4 | exon | 12267807 | 12268016 | 12267807 | ID=MS.gene27938.t1.exon1;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12267807 | 12268016 | 12267807 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12269016 | 12269117 | 12269016 | ID=MS.gene27938.t1.exon2;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12269016 | 12269117 | 12269016 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12269598 | 12269631 | 12269598 | ID=MS.gene27938.t1.exon3;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12269598 | 12269631 | 12269598 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12269835 | 12269908 | 12269835 | ID=MS.gene27938.t1.exon4;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12269835 | 12269908 | 12269835 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12270042 | 12270107 | 12270042 | ID=MS.gene27938.t1.exon5;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12270042 | 12270107 | 12270042 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12270218 | 12270282 | 12270218 | ID=MS.gene27938.t1.exon6;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12270218 | 12270282 | 12270218 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12270423 | 12270510 | 12270423 | ID=MS.gene27938.t1.exon7;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12270423 | 12270510 | 12270423 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12270585 | 12270650 | 12270585 | ID=MS.gene27938.t1.exon8;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12270585 | 12270650 | 12270585 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12271151 | 12271316 | 12271151 | ID=MS.gene27938.t1.exon9;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12271151 | 12271316 | 12271151 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12272832 | 12272915 | 12272832 | ID=MS.gene27938.t1.exon10;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12272832 | 12272915 | 12272832 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12273000 | 12273127 | 12273000 | ID=MS.gene27938.t1.exon11;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12273000 | 12273127 | 12273000 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| chr4.4 | exon | 12273528 | 12273713 | 12273528 | ID=MS.gene27938.t1.exon12;Parent=MS.gene27938.t1 |
| chr4.4 | CDS | 12273528 | 12273713 | 12273528 | ID=cds.MS.gene27938.t1;Parent=MS.gene27938.t1 |
| Gene Sequence |
| Protein sequence |
