Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28049.t1 | XP_013446772.1 | 86 | 286 | 30 | 2 | 1 | 276 | 1 | 286 | 8.40E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28049.t1 | A0A072TTF9 | 86.0 | 286 | 30 | 2 | 1 | 276 | 1 | 286 | 6.0e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene28049 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene049151 | MS.gene28049 | 0.824637 | 7.24E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene28049 | 0.811316 | 7.44E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene28049 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene28049 | 0.843297 | 1.53E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene28049 | 0.820343 | 7.21E-53 | -1.69E-46 |
| MS.gene049599 | MS.gene28049 | -0.800226 | 1.59E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene28049 | 0.879513 | 1.17E-69 | -1.69E-46 |
| MS.gene049910 | MS.gene28049 | 0.835437 | 1.68E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene28049 | 0.820965 | 5.19E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene28049 | 0.849357 | 3.41E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene28049 | 0.843235 | 1.59E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene28049 | 0.85191 | 6.52E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene28049 | 0.848706 | 5.16E-60 | -1.69E-46 |
| MS.gene050319 | MS.gene28049 | -0.803039 | 4.22E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene28049 | -0.800211 | 1.60E-48 | -1.69E-46 |
| MS.gene050558 | MS.gene28049 | 0.830558 | 2.75E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene28049 | -0.841022 | 6.11E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene28049 | 0.860589 | 1.86E-63 | -1.69E-46 |
| MS.gene050820 | MS.gene28049 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene05119 | MS.gene28049 | -0.843753 | 1.15E-58 | -1.69E-46 |
| MS.gene051535 | MS.gene28049 | 0.802412 | 5.68E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene28049 | 0.838097 | 3.52E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene28049 | 0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene28049 | 0.846811 | 1.72E-59 | -1.69E-46 |
| MS.gene051983 | MS.gene28049 | 0.861659 | 8.79E-64 | -1.69E-46 |
| MS.gene052077 | MS.gene28049 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene28049 | 0.818148 | 2.28E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene28049 | 0.810785 | 9.70E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene28049 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene28049 | 0.800411 | 1.46E-48 | -1.69E-46 |
| MS.gene052309 | MS.gene28049 | -0.847466 | 1.14E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene28049 | 0.831386 | 1.72E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene28049 | 0.813217 | 2.86E-51 | -1.69E-46 |
| MS.gene052600 | MS.gene28049 | 0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene053559 | MS.gene28049 | 0.836232 | 1.06E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene28049 | 0.900176 | 9.52E-78 | -1.69E-46 |
| MS.gene054379 | MS.gene28049 | 0.808711 | 2.71E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene28049 | 0.853914 | 1.74E-61 | -1.69E-46 |
| MS.gene054542 | MS.gene28049 | 0.810764 | 9.80E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene28049 | 0.883619 | 3.85E-71 | -1.69E-46 |
| MS.gene054942 | MS.gene28049 | 0.853601 | 2.15E-61 | -1.69E-46 |
| MS.gene054983 | MS.gene28049 | 0.829422 | 5.19E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene28049 | 0.86137 | 1.08E-63 | -1.69E-46 |
| MS.gene055428 | MS.gene28049 | 0.847523 | 1.10E-59 | -1.69E-46 |
| MS.gene055712 | MS.gene28049 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene055859 | MS.gene28049 | 0.814861 | 1.24E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene28049 | 0.810341 | 1.21E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene28049 | 0.813234 | 2.84E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene28049 | 0.865484 | 5.71E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene28049 | 0.850952 | 1.22E-60 | -1.69E-46 |
| MS.gene057245 | MS.gene28049 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene28049 | 0.815524 | 8.85E-52 | -1.69E-46 |
| MS.gene057439 | MS.gene28049 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene28049 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene28049 | 0.829609 | 4.68E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene28049 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene28049 | 0.868357 | 6.93E-66 | -1.69E-46 |
| MS.gene05811 | MS.gene28049 | 0.845197 | 4.72E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene28049 | 0.842714 | 2.18E-58 | -1.69E-46 |
| MS.gene058435 | MS.gene28049 | 0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene28049 | 0.828291 | 9.76E-55 | -1.69E-46 |
| MS.gene058749 | MS.gene28049 | 0.813389 | 2.62E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene28049 | 0.838132 | 3.45E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene28049 | 0.807533 | 4.83E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene28049 | 0.836684 | 8.10E-57 | -1.69E-46 |
| MS.gene059128 | MS.gene28049 | 0.802266 | 6.09E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene28049 | 0.841728 | 3.98E-58 | -1.69E-46 |
| MS.gene059518 | MS.gene28049 | 0.823062 | 1.70E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene28049 | 0.834701 | 2.57E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene28049 | 0.885014 | 1.17E-71 | -1.69E-46 |
| MS.gene059894 | MS.gene28049 | 0.856103 | 4.03E-62 | -1.69E-46 |
| MS.gene059899 | MS.gene28049 | 0.858676 | 6.99E-63 | -1.69E-46 |
| MS.gene060480 | MS.gene28049 | 0.801583 | 8.41E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene28049 | -0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene28049 | 0.835051 | 2.10E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene28049 | -0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene28049 | -0.811224 | 7.79E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28049.t1 | MTR_8g089995 | 85.467 | 289 | 26 | 2 | 1 | 276 | 1 | 286 | 1.40e-152 | 429 |
| MS.gene28049.t1 | MTR_8g089995 | 84.647 | 241 | 21 | 2 | 1 | 228 | 1 | 238 | 3.62e-118 | 340 |
| MS.gene28049.t1 | MTR_3g086990 | 48.148 | 243 | 107 | 5 | 30 | 261 | 30 | 264 | 5.59e-52 | 172 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28049.t1 | AT5G65250 | 56.522 | 184 | 75 | 2 | 66 | 249 | 93 | 271 | 1.13e-56 | 185 |
Find 81 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTAGGCAGCTTGAGAAAT+TGG | 0.177372 | 4.4:-10979188 | MS.gene28049:CDS |
| AGCCCTGCAATCAGACATTT+TGG | 0.237492 | 4.4:-10977279 | MS.gene28049:CDS |
| CCGTGTTCTTCACTAGTTTC+AGG | 0.238520 | 4.4:+10976735 | None:intergenic |
| TTTGCAGAGAATTGAGAAAT+TGG | 0.262448 | 4.4:-10979251 | MS.gene28049:CDS |
| GTAGTAATTACCTCAGTTAT+AGG | 0.273196 | 4.4:+10979127 | None:intergenic |
| GGAAAGGAAGGAATCAAAAT+TGG | 0.279238 | 4.4:+10979495 | None:intergenic |
| GGCTAATGCTCTTGCGGCCT+CGG | 0.289526 | 4.4:+10977298 | None:intergenic |
| GAACGGTGGGGTTTCTGTTT+CGG | 0.293881 | 4.4:-10979284 | MS.gene28049:CDS |
| CCGTCGCCGTGACTGCAATT+TGG | 0.295008 | 4.4:-10979426 | MS.gene28049:CDS |
| AGAGTAATGCGACGGTTGTT+AGG | 0.336551 | 4.4:-10979216 | MS.gene28049:CDS |
| AGCTTGAGAAATTGGGGATT+AGG | 0.351998 | 4.4:-10979180 | MS.gene28049:CDS |
| TCTAGGCAGCTTGAGAAATT+GGG | 0.354881 | 4.4:-10979187 | MS.gene28049:CDS |
| TCTCCAAAATGTCTGATTGC+AGG | 0.356336 | 4.4:+10977276 | None:intergenic |
| AGGTTCCTTCAAACCCTTCC+TGG | 0.363702 | 4.4:+10979147 | None:intergenic |
| GAATGAGGAGTTGAAGAAAA+AGG | 0.364028 | 4.4:+10979649 | None:intergenic |
| TGGGGTTTCTGTTTCGGAGG+TGG | 0.403058 | 4.4:-10979278 | MS.gene28049:CDS |
| TTGAATGAAGACTGCAGCTC+TGG | 0.409148 | 4.4:-10977333 | MS.gene28049:intron |
| TGGAAAGTGGTTTGAGGCTG+AGG | 0.435164 | 4.4:+10979593 | None:intergenic |
| GAATCTCAATGCGGTAAATC+AGG | 0.435977 | 4.4:-10976685 | MS.gene28049:CDS |
| AGAGAAGAGCGGAGAGTTCG+AGG | 0.448141 | 4.4:+10979470 | None:intergenic |
| GAGTAATGCGACGGTTGTTA+GGG | 0.448272 | 4.4:-10979215 | MS.gene28049:CDS |
| GACGGAAATTTGAGATCGGC+GGG | 0.467109 | 4.4:+10979525 | None:intergenic |
| GCAGAGAATTGAGAAATTGG+AGG | 0.472739 | 4.4:-10979248 | MS.gene28049:CDS |
| GGAAGTGAAACGGTGGGGTG+TGG | 0.478399 | 4.4:+10979573 | None:intergenic |
| TTGCGAAGGCAGGTAAGCTA+TGG | 0.479688 | 4.4:-10976767 | MS.gene28049:CDS |
| AGTGGTTTGAGGCTGAGGAT+TGG | 0.483125 | 4.4:+10979598 | None:intergenic |
| GAAGGAATCAAAATTGGAAT+CGG | 0.487467 | 4.4:+10979501 | None:intergenic |
| AAACGGTGGGGTGTGGAAAG+TGG | 0.487596 | 4.4:+10979580 | None:intergenic |
| AGAGGACGTAAGAGTGAATG+AGG | 0.489716 | 4.4:+10979634 | None:intergenic |
| CGGTGATTAGGAGAAGGAAA+TGG | 0.490410 | 4.4:-10979321 | MS.gene28049:CDS |
| GGATTAGGTTTCGTGTTACC+AGG | 0.498013 | 4.4:-10979165 | MS.gene28049:CDS |
| ATTCTTGCAATTGCGAAGGC+AGG | 0.502036 | 4.4:-10976777 | MS.gene28049:CDS |
| CGGAGAGTTCGAGGAAGGAA+AGG | 0.506937 | 4.4:+10979479 | None:intergenic |
| GAGAATTGAGAAATTGGAGG+AGG | 0.507588 | 4.4:-10979245 | MS.gene28049:CDS |
| TGTTACCAGGAAGGGTTTGA+AGG | 0.509421 | 4.4:-10979152 | MS.gene28049:CDS |
| GGAGTTGGAGTGGACGGTGT+AGG | 0.511955 | 4.4:+10979552 | None:intergenic |
| CGTGACTGCAATTTGGAAGA+AGG | 0.512903 | 4.4:-10979419 | MS.gene28049:CDS |
| ATTGGAGTATTGAGATGAAG+AGG | 0.520273 | 4.4:+10979616 | None:intergenic |
| CTCCAAAATGTCTGATTGCA+GGG | 0.525218 | 4.4:+10977277 | None:intergenic |
| CGGAAATTTGAGATCGGCGG+GGG | 0.525952 | 4.4:+10979527 | None:intergenic |
| ACTTTCATTTCAGGATTACA+AGG | 0.527608 | 4.4:-10976345 | MS.gene28049:intron |
| ATCAAAATTGGAATCGGCGA+CGG | 0.530085 | 4.4:+10979507 | None:intergenic |
| CTTCTTCCAAATTGCAGTCA+CGG | 0.532215 | 4.4:+10979420 | None:intergenic |
| GGGGAAGGAGTTGGAGTGGA+CGG | 0.535310 | 4.4:+10979546 | None:intergenic |
| CTAGGCAGCTTGAGAAATTG+GGG | 0.538326 | 4.4:-10979186 | MS.gene28049:CDS |
| CGGTGGGGTTTCTGTTTCGG+AGG | 0.539820 | 4.4:-10979281 | MS.gene28049:CDS |
| AGGTTTCGTGTTACCAGGAA+GGG | 0.543976 | 4.4:-10979160 | MS.gene28049:CDS |
| GAGAGACGGTGTTGAACGGT+GGG | 0.546933 | 4.4:-10979297 | MS.gene28049:CDS |
| GAGAAGGAAATGGAGAGAGA+CGG | 0.562581 | 4.4:-10979311 | MS.gene28049:CDS |
| TTTGAAGGAACCTATAACTG+AGG | 0.565016 | 4.4:-10979137 | MS.gene28049:intron |
| AAGAGCGGAGAGTTCGAGGA+AGG | 0.566579 | 4.4:+10979474 | None:intergenic |
| TAGGTTTCGTGTTACCAGGA+AGG | 0.568467 | 4.4:-10979161 | MS.gene28049:CDS |
| GAGTTCGAGGAAGGAAAGGA+AGG | 0.569587 | 4.4:+10979483 | None:intergenic |
| AATGCGTGAAATGGTGATGA+TGG | 0.584311 | 4.4:+10979674 | None:intergenic |
| TGGAGAGAGACGGTGTTGAA+CGG | 0.589136 | 4.4:-10979301 | MS.gene28049:CDS |
| GGACGGTGTAGGAAGTGAAA+CGG | 0.592277 | 4.4:+10979563 | None:intergenic |
| TGCGAAGGCAGGTAAGCTAT+GGG | 0.592521 | 4.4:-10976766 | MS.gene28049:CDS |
| AAGGAGTTATATCTTGCTAT+CGG | 0.595941 | 4.4:-10979400 | MS.gene28049:CDS |
| CGACGGAAATTTGAGATCGG+CGG | 0.599042 | 4.4:+10979524 | None:intergenic |
| CTGGTGCGGTGATTAGGAGA+AGG | 0.610719 | 4.4:-10979327 | MS.gene28049:CDS |
| GGTGTAGGAAGTGAAACGGT+GGG | 0.613998 | 4.4:+10979567 | None:intergenic |
| CGGCGACGGAAATTTGAGAT+CGG | 0.614058 | 4.4:+10979521 | None:intergenic |
| CCAAATTGCAGTCACGGCGA+CGG | 0.616365 | 4.4:+10979426 | None:intergenic |
| GGGGTGTGGAAAGTGGTTTG+AGG | 0.618981 | 4.4:+10979587 | None:intergenic |
| TTGCAGGGCTAATGCTCTTG+CGG | 0.622054 | 4.4:+10977292 | None:intergenic |
| GGATTTGAAGAGTAATGCGA+CGG | 0.629644 | 4.4:-10979224 | MS.gene28049:CDS |
| GACGGTGAAAGATACGATGA+GGG | 0.637410 | 4.4:+10979444 | None:intergenic |
| CGACGGTGAAAGATACGATG+AGG | 0.643423 | 4.4:+10979443 | None:intergenic |
| TCTCATTCTTGCAATTGCGA+AGG | 0.648334 | 4.4:-10976781 | MS.gene28049:CDS |
| AGAGAGACGGTGTTGAACGG+TGG | 0.648405 | 4.4:-10979298 | MS.gene28049:CDS |
| CGGTGTAGGAAGTGAAACGG+TGG | 0.657647 | 4.4:+10979566 | None:intergenic |
| CCTGAAACTAGTGAAGAACA+CGG | 0.674207 | 4.4:-10976735 | MS.gene28049:CDS |
| TCTCAATGCGGTAAATCAGG+AGG | 0.687985 | 4.4:-10976682 | MS.gene28049:intron |
| AGAGACGGTGTTGAACGGTG+GGG | 0.693868 | 4.4:-10979296 | MS.gene28049:CDS |
| TCGGTAACAGAGTTGCTCCG+TGG | 0.696566 | 4.4:-10979381 | MS.gene28049:CDS |
| GATGAGGGAAGAGAGAAGAG+CGG | 0.709448 | 4.4:+10979459 | None:intergenic |
| CAGATGAATATGCATTGGTG+TGG | 0.711307 | 4.4:-10976265 | MS.gene28049:CDS |
| TCTGGCACAGAAGAATTCCG+AGG | 0.724089 | 4.4:-10977315 | MS.gene28049:CDS |
| CTCAGCTGCGAATCTCAATG+CGG | 0.734213 | 4.4:-10976694 | MS.gene28049:CDS |
| GTGTAGGAAGTGAAACGGTG+GGG | 0.736083 | 4.4:+10979568 | None:intergenic |
| ACGGAAATTTGAGATCGGCG+GGG | 0.740613 | 4.4:+10979526 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTTTTTTTTTTTGA+GGG | - | chr4.4:10977310-10977329 | MS.gene28049:CDS | 10.0% |
| !!! | TTTTCTTTTTTTTTTTTTTG+AGG | - | chr4.4:10977309-10977328 | MS.gene28049:CDS | 10.0% |
| !! | ACATTTCATAATAAACTTTA+TGG | + | chr4.4:10976901-10976920 | None:intergenic | 15.0% |
| !! | TATAAGCAATAATATCATAA+TGG | - | chr4.4:10977418-10977437 | MS.gene28049:intron | 15.0% |
| !! | TATTCTATCTAATATTCAAT+AGG | + | chr4.4:10977158-10977177 | None:intergenic | 15.0% |
| !! | TATTGAATATTAGATAGAAT+AGG | - | chr4.4:10977157-10977176 | MS.gene28049:intron | 15.0% |
| !! | AATGATTACACATTTACTAA+GGG | - | chr4.4:10979436-10979455 | MS.gene28049:CDS | 20.0% |
| !! | TAATGATTACACATTTACTA+AGG | - | chr4.4:10979435-10979454 | MS.gene28049:CDS | 20.0% |
| !!! | AGTTTGTTATTGAACTTTAA+AGG | - | chr4.4:10978798-10978817 | MS.gene28049:intron | 20.0% |
| !!! | ATTTTGTTATTTGAACAAGT+CGG | + | chr4.4:10977228-10977247 | None:intergenic | 20.0% |
| !!! | TTAAAGGTAACATTATTTTG+TGG | - | chr4.4:10978814-10978833 | MS.gene28049:intron | 20.0% |
| !!! | TTTAGTATAGTTTTTACCAA+TGG | - | chr4.4:10977126-10977145 | MS.gene28049:intron | 20.0% |
| ! | AAAAACAGATGAATATGCAT+TGG | - | chr4.4:10979671-10979690 | MS.gene28049:CDS | 25.0% |
| ! | AGAGTTTAAGTAACATTGAA+GGG | + | chr4.4:10978740-10978759 | None:intergenic | 25.0% |
| ! | TCAAATATTCTAGCAATGTT+AGG | - | chr4.4:10977442-10977461 | MS.gene28049:intron | 25.0% |
| ! | TGTTCATTTACTTTCATTTC+AGG | - | chr4.4:10979587-10979606 | MS.gene28049:CDS | 25.0% |
| ! | TTCCTAAAAACATAAGCTTA+TGG | - | chr4.4:10977641-10977660 | MS.gene28049:intron | 25.0% |
| ! | TTTATGTGCCAATAAAATTC+TGG | + | chr4.4:10979415-10979434 | None:intergenic | 25.0% |
| !! | ATCCATAAGCTTATGTTTTT+AGG | + | chr4.4:10977646-10977665 | None:intergenic | 25.0% |
| !! | TAAGTTGGAATATATTCAAG+AGG | + | chr4.4:10976952-10976971 | None:intergenic | 25.0% |
| !! | TTTTTGTTACAGCAAAACTA+AGG | + | chr4.4:10979656-10979675 | None:intergenic | 25.0% |
| !!! | CTTCAAATAAAGCTTTAAGT+TGG | + | chr4.4:10976967-10976986 | None:intergenic | 25.0% |
| !!! | TATCTTTGAAACAAAGTATG+AGG | - | chr4.4:10978177-10978196 | MS.gene28049:intron | 25.0% |
| !!! | TTACTAGTGTTTTTAGCTTA+AGG | + | chr4.4:10977912-10977931 | None:intergenic | 25.0% |
| AAACTGGAATACTAGATTCA+TGG | + | chr4.4:10978997-10979016 | None:intergenic | 30.0% | |
| ACTTTCATTTCAGGATTACA+AGG | - | chr4.4:10979596-10979615 | MS.gene28049:CDS | 30.0% | |
| ATATGTGCTGAGAGTTTATT+GGG | - | chr4.4:10977278-10977297 | MS.gene28049:CDS | 30.0% | |
| CAGAGTTTAAGTAACATTGA+AGG | + | chr4.4:10978741-10978760 | None:intergenic | 30.0% | |
| GAAAACCATCAAATTACAGA+GGG | - | chr4.4:10979314-10979333 | MS.gene28049:CDS | 30.0% | |
| GAAGGAATCAAAATTGGAAT+CGG | + | chr4.4:10976443-10976462 | None:intergenic | 30.0% | |
| GTAGTAATTACCTCAGTTAT+AGG | + | chr4.4:10976817-10976836 | None:intergenic | 30.0% | |
| TTAAGGTTCATAACCAATCT+TGG | - | chr4.4:10977477-10977496 | MS.gene28049:intron | 30.0% | |
| TTCCAGTAATATGAATTCCT+CGG | + | chr4.4:10978372-10978391 | None:intergenic | 30.0% | |
| TTTAACCCAAGCTTCAAATT+TGG | + | chr4.4:10979289-10979308 | None:intergenic | 30.0% | |
| TTTGCAGAGAATTGAGAAAT+TGG | - | chr4.4:10976690-10976709 | MS.gene28049:CDS | 30.0% | |
| ! | AAGGAGTTATATCTTGCTAT+CGG | - | chr4.4:10976541-10976560 | MS.gene28049:intron | 30.0% |
| ! | ACCAGATTGAGTCAATTTTT+AGG | + | chr4.4:10978293-10978312 | None:intergenic | 30.0% |
| ! | ATTCAATAGGTCTTTTCCAT+TGG | + | chr4.4:10977145-10977164 | None:intergenic | 30.0% |
| ! | CAAAGTAGCCAGAATTTTAT+TGG | - | chr4.4:10979404-10979423 | MS.gene28049:CDS | 30.0% |
| ! | CCAGATTGAGTCAATTTTTA+GGG | + | chr4.4:10978292-10978311 | None:intergenic | 30.0% |
| ! | TTAGGTTGCTGACAAAATTA+AGG | - | chr4.4:10977460-10977479 | MS.gene28049:intron | 30.0% |
| !! | TCATTAACATTTTGAGTGTC+TGG | - | chr4.4:10978508-10978527 | MS.gene28049:intron | 30.0% |
| AAAAAGGTGAATGCGTGAAA+TGG | + | chr4.4:10976279-10976298 | None:intergenic | 35.0% | |
| AAAATCTCTAGTCTGACGTA+TGG | + | chr4.4:10979024-10979043 | None:intergenic | 35.0% | |
| AAATCTCTAGTCTGACGTAT+GGG | + | chr4.4:10979023-10979042 | None:intergenic | 35.0% | |
| AATAGAGTCTGGCACTTTAT+TGG | - | chr4.4:10977807-10977826 | MS.gene28049:intron | 35.0% | |
| ACCAAAAACAACAAACTCCA+CGG | + | chr4.4:10976580-10976599 | None:intergenic | 35.0% | |
| ACTAACCTCAAACTGCTATA+GGG | - | chr4.4:10977784-10977803 | MS.gene28049:intron | 35.0% | |
| AGGTCAGAAAACAATGAAAC+TGG | - | chr4.4:10978212-10978231 | MS.gene28049:intron | 35.0% | |
| ATCGAAGATTGATTGAAAGC+CGG | + | chr4.4:10977749-10977768 | None:intergenic | 35.0% | |
| ATTGCAACCAGAAGTAGTTA+GGG | - | chr4.4:10977547-10977566 | MS.gene28049:intron | 35.0% | |
| CAAAGTATGAGGTTTCAAGA+AGG | - | chr4.4:10978188-10978207 | MS.gene28049:intron | 35.0% | |
| GAATGAGGAGTTGAAGAAAA+AGG | + | chr4.4:10976295-10976314 | None:intergenic | 35.0% | |
| GATATGTGCTGAGAGTTTAT+TGG | - | chr4.4:10977277-10977296 | MS.gene28049:CDS | 35.0% | |
| GGAAAACCATCAAATTACAG+AGG | - | chr4.4:10979313-10979332 | MS.gene28049:CDS | 35.0% | |
| GGAAAGGAAGGAATCAAAAT+TGG | + | chr4.4:10976449-10976468 | None:intergenic | 35.0% | |
| GGAAGAAAAAAACAGGAATG+TGG | - | chr4.4:10977981-10978000 | MS.gene28049:intron | 35.0% | |
| GGTCAGAAAACAATGAAACT+GGG | - | chr4.4:10978213-10978232 | MS.gene28049:intron | 35.0% | |
| GGTTGCAATCTAGGTTATTT+AGG | + | chr4.4:10977536-10977555 | None:intergenic | 35.0% | |
| GTCAGAAAACAATGAAACTG+GGG | - | chr4.4:10978214-10978233 | MS.gene28049:intron | 35.0% | |
| TGTATTCATGTGTTCGTCAT+TGG | - | chr4.4:10977599-10977618 | MS.gene28049:intron | 35.0% | |
| TTACTCAACGAGTCAATTCA+AGG | - | chr4.4:10979495-10979514 | MS.gene28049:CDS | 35.0% | |
| TTCATCCCTCTGTAATTTGA+TGG | + | chr4.4:10979322-10979341 | None:intergenic | 35.0% | |
| TTGAAGCTTGGGTTAAACTA+AGG | - | chr4.4:10979292-10979311 | MS.gene28049:CDS | 35.0% | |
| TTTGAAGGAACCTATAACTG+AGG | - | chr4.4:10976804-10976823 | MS.gene28049:CDS | 35.0% | |
| ! | ACTTTGACTTTGTGTGTAGA+TGG | + | chr4.4:10979390-10979409 | None:intergenic | 35.0% |
| ! | CCCTAAAAATTGACTCAATC+TGG | - | chr4.4:10978289-10978308 | MS.gene28049:intron | 35.0% |
| ! | TCGAGTTTGACTTATCTTGA+TGG | - | chr4.4:10979095-10979114 | MS.gene28049:intron | 35.0% |
| ! | TTGCAAGAAAATGCAGGTTT+TGG | - | chr4.4:10978129-10978148 | MS.gene28049:intron | 35.0% |
| !! | ATTGGAGTATTGAGATGAAG+AGG | + | chr4.4:10976328-10976347 | None:intergenic | 35.0% |
| !! | GTTTTGGATGGAAATGACAT+TGG | - | chr4.4:10978145-10978164 | MS.gene28049:intron | 35.0% |
| !! | TCTGGTTCTGTGGTAAATTT+CGG | - | chr4.4:10979539-10979558 | MS.gene28049:CDS | 35.0% |
| !! | TTTTTGAGGGAGAGTTTGTT+GGG | - | chr4.4:10977323-10977342 | MS.gene28049:CDS | 35.0% |
| !!! | AAGAAAATGCAGGTTTTGGA+TGG | - | chr4.4:10978133-10978152 | MS.gene28049:intron | 35.0% |
| !!! | AGTTTGTTGTTTTTGGTGGT+TGG | - | chr4.4:10976583-10976602 | MS.gene28049:intron | 35.0% |
| !!! | TTTTTTGAGGGAGAGTTTGT+TGG | - | chr4.4:10977322-10977341 | MS.gene28049:CDS | 35.0% |
| AACCCAAGCTTCAAATTTGG+TGG | + | chr4.4:10979286-10979305 | None:intergenic | 40.0% | |
| AACCCCTGATATGAGTAGAT+TGG | - | chr4.4:10977705-10977724 | MS.gene28049:intron | 40.0% | |
| ACAGAAGACTTAGAACACAG+CGG | - | chr4.4:10977959-10977978 | MS.gene28049:intron | 40.0% | |
| ACAGTACAGGATCTACATCT+CGG | + | chr4.4:10978341-10978360 | None:intergenic | 40.0% | |
| AGCTCCAATCTACTCATATC+AGG | + | chr4.4:10977712-10977731 | None:intergenic | 40.0% | |
| AGCTTGAGAAATTGGGGATT+AGG | - | chr4.4:10976761-10976780 | MS.gene28049:CDS | 40.0% | |
| ATCAAAATTGGAATCGGCGA+CGG | + | chr4.4:10976437-10976456 | None:intergenic | 40.0% | |
| ATGAGCTTGCAAGAAAATGC+AGG | - | chr4.4:10978123-10978142 | MS.gene28049:intron | 40.0% | |
| CACATCATTGTGTTGTGTGT+GGG | + | chr4.4:10978937-10978956 | None:intergenic | 40.0% | |
| CAGTAATATGAATTCCTCGG+AGG | + | chr4.4:10978369-10978388 | None:intergenic | 40.0% | |
| CCTGAAACTAGTGAAGAACA+CGG | - | chr4.4:10979206-10979225 | MS.gene28049:CDS | 40.0% | |
| CGAACACATGAATACACACT+TGG | + | chr4.4:10977595-10977614 | None:intergenic | 40.0% | |
| CTAATTCCCCTAACTACTTC+TGG | + | chr4.4:10977557-10977576 | None:intergenic | 40.0% | |
| CTATTCCCTATAGCAGTTTG+AGG | + | chr4.4:10977792-10977811 | None:intergenic | 40.0% | |
| CTCCAAAATGTCTGATTGCA+GGG | + | chr4.4:10978667-10978686 | None:intergenic | 40.0% | |
| CTCCAATCTACTCATATCAG+GGG | + | chr4.4:10977710-10977729 | None:intergenic | 40.0% | |
| CTCCGAGGAATTCATATTAC+TGG | - | chr4.4:10978367-10978386 | MS.gene28049:intron | 40.0% | |
| CTTCTTCCAAATTGCAGTCA+CGG | + | chr4.4:10976524-10976543 | None:intergenic | 40.0% | |
| GAATCTCAATGCGGTAAATC+AGG | - | chr4.4:10979256-10979275 | MS.gene28049:CDS | 40.0% | |
| GACTAACCTCAAACTGCTAT+AGG | - | chr4.4:10977783-10977802 | MS.gene28049:intron | 40.0% | |
| GAGAATTGAGAAATTGGAGG+AGG | - | chr4.4:10976696-10976715 | MS.gene28049:CDS | 40.0% | |
| GATTGCAACCAGAAGTAGTT+AGG | - | chr4.4:10977546-10977565 | MS.gene28049:intron | 40.0% | |
| GCAGAGAATTGAGAAATTGG+AGG | - | chr4.4:10976693-10976712 | MS.gene28049:CDS | 40.0% | |
| GCTCCAATCTACTCATATCA+GGG | + | chr4.4:10977711-10977730 | None:intergenic | 40.0% | |
| GGAATACTAGATTCATGGTC+TGG | + | chr4.4:10978992-10979011 | None:intergenic | 40.0% | |
| GGATTTGAAGAGTAATGCGA+CGG | - | chr4.4:10976717-10976736 | MS.gene28049:CDS | 40.0% | |
| GTATGAGGTTTCAAGAAGGA+AGG | - | chr4.4:10978192-10978211 | MS.gene28049:intron | 40.0% | |
| GTGGAATCTGAGCAAAAGAT+AGG | - | chr4.4:10978000-10978019 | MS.gene28049:intron | 40.0% | |
| TCAACGAGTCAATTCAAGGA+GGG | - | chr4.4:10979499-10979518 | MS.gene28049:CDS | 40.0% | |
| TCACATCATTGTGTTGTGTG+TGG | + | chr4.4:10978938-10978957 | None:intergenic | 40.0% | |
| TCGAAGATTGATTGAAAGCC+GGG | + | chr4.4:10977748-10977767 | None:intergenic | 40.0% | |
| TCTAGGCAGCTTGAGAAATT+GGG | - | chr4.4:10976754-10976773 | MS.gene28049:CDS | 40.0% | |
| TCTCATTCTTGCAATTGCGA+AGG | - | chr4.4:10979160-10979179 | MS.gene28049:CDS | 40.0% | |
| TCTCCAAAATGTCTGATTGC+AGG | + | chr4.4:10978668-10978687 | None:intergenic | 40.0% | |
| TCTGACGTATGGGTTTAAAC+TGG | + | chr4.4:10979013-10979032 | None:intergenic | 40.0% | |
| TGGTGTTTGATCGTTCATGT+AGG | - | chr4.4:10979115-10979134 | MS.gene28049:intron | 40.0% | |
| TTGCAACCAGAAGTAGTTAG+GGG | - | chr4.4:10977548-10977567 | MS.gene28049:intron | 40.0% | |
| ! | AAAGGTTTTGCTAGCAATGC+AGG | - | chr4.4:10978707-10978726 | MS.gene28049:intron | 40.0% |
| ! | AATGCGTGAAATGGTGATGA+TGG | + | chr4.4:10976270-10976289 | None:intergenic | 40.0% |
| ! | AATTGACTCAATCTGGTTGC+AGG | - | chr4.4:10978296-10978315 | MS.gene28049:intron | 40.0% |
| ! | ACTACTTCTGGTTGCAATCT+AGG | + | chr4.4:10977545-10977564 | None:intergenic | 40.0% |
| ! | AGTGGCTGCTTTCATGAAAT+GGG | + | chr4.4:10978255-10978274 | None:intergenic | 40.0% |
| ! | CAGATGAATATGCATTGGTG+TGG | - | chr4.4:10979676-10979695 | MS.gene28049:CDS | 40.0% |
| ! | GTCCACCAAATTTGAAGCTT+GGG | - | chr4.4:10979281-10979300 | MS.gene28049:CDS | 40.0% |
| ! | TAGTGGCTGCTTTCATGAAA+TGG | + | chr4.4:10978256-10978275 | None:intergenic | 40.0% |
| ! | TTTTTCCCCATCTGTATCCA+CGG | + | chr4.4:10979475-10979494 | None:intergenic | 40.0% |
| !! | AACACTTTAGCTCTCATCTG+CGG | - | chr4.4:10978854-10978873 | MS.gene28049:intron | 40.0% |
| !! | CATATCAGGGGTTAGTTTAG+AGG | + | chr4.4:10977698-10977717 | None:intergenic | 40.0% |
| !! | CATTTTGAGTGTCTGGTTGA+AGG | - | chr4.4:10978515-10978534 | MS.gene28049:intron | 40.0% |
| !! | CTGGTTCTGTGGTAAATTTC+GGG | - | chr4.4:10979540-10979559 | MS.gene28049:CDS | 40.0% |
| !! | GCAATCAGACATTTTGGAGA+AGG | - | chr4.4:10978668-10978687 | MS.gene28049:intron | 40.0% |
| !!! | GTGGAGTTTGTTGTTTTTGG+TGG | - | chr4.4:10976579-10976598 | MS.gene28049:intron | 40.0% |
| !!! | TCCGTGGAGTTTGTTGTTTT+TGG | - | chr4.4:10976576-10976595 | MS.gene28049:intron | 40.0% |
| AAGTTTCCCGTGGATACAGA+TGG | - | chr4.4:10979465-10979484 | MS.gene28049:CDS | 45.0% | |
| AGAGGACGTAAGAGTGAATG+AGG | + | chr4.4:10976310-10976329 | None:intergenic | 45.0% | |
| AGAGTAATGCGACGGTTGTT+AGG | - | chr4.4:10976725-10976744 | MS.gene28049:CDS | 45.0% | |
| AGGGAGATTCACAGTTGTAG+TGG | + | chr4.4:10978273-10978292 | None:intergenic | 45.0% | |
| AGGTTTCGTGTTACCAGGAA+GGG | - | chr4.4:10976781-10976800 | MS.gene28049:CDS | 45.0% | |
| AGTTTCCCGTGGATACAGAT+GGG | - | chr4.4:10979466-10979485 | MS.gene28049:CDS | 45.0% | |
| ATTCTTGCAATTGCGAAGGC+AGG | - | chr4.4:10979164-10979183 | MS.gene28049:CDS | 45.0% | |
| ATTGTGTTGTGTGTGGGTGT+GGG | + | chr4.4:10978931-10978950 | None:intergenic | 45.0% | |
| CAACGAGTCAATTCAAGGAG+GGG | - | chr4.4:10979500-10979519 | MS.gene28049:CDS | 45.0% | |
| CACAGCGGGAAGAAAAAAAC+AGG | - | chr4.4:10977974-10977993 | MS.gene28049:intron | 45.0% | |
| CAGAAGACTTAGAACACAGC+GGG | - | chr4.4:10977960-10977979 | MS.gene28049:intron | 45.0% | |
| CGGTGATTAGGAGAAGGAAA+TGG | - | chr4.4:10976620-10976639 | MS.gene28049:intron | 45.0% | |
| CGTGACTGCAATTTGGAAGA+AGG | - | chr4.4:10976522-10976541 | MS.gene28049:intron | 45.0% | |
| CTAGGCAGCTTGAGAAATTG+GGG | - | chr4.4:10976755-10976774 | MS.gene28049:CDS | 45.0% | |
| CTCAACGAGTCAATTCAAGG+AGG | - | chr4.4:10979498-10979517 | MS.gene28049:CDS | 45.0% | |
| CTGCTATAGGGAATAGAGTC+TGG | - | chr4.4:10977796-10977815 | MS.gene28049:intron | 45.0% | |
| GACGGTGAAAGATACGATGA+GGG | + | chr4.4:10976500-10976519 | None:intergenic | 45.0% | |
| GAGAAGGAAATGGAGAGAGA+CGG | - | chr4.4:10976630-10976649 | MS.gene28049:intron | 45.0% | |
| GAGCTTGAAATGCTAATGCC+CGG | - | chr4.4:10977727-10977746 | MS.gene28049:intron | 45.0% | |
| GAGTAATGCGACGGTTGTTA+GGG | - | chr4.4:10976726-10976745 | MS.gene28049:CDS | 45.0% | |
| GGAGAATTGTCTGAACTCTC+TGG | - | chr4.4:10979521-10979540 | MS.gene28049:CDS | 45.0% | |
| GGATTAGGTTTCGTGTTACC+AGG | - | chr4.4:10976776-10976795 | MS.gene28049:CDS | 45.0% | |
| GTCTAGGCAGCTTGAGAAAT+TGG | - | chr4.4:10976753-10976772 | MS.gene28049:CDS | 45.0% | |
| TAGGTTTCGTGTTACCAGGA+AGG | - | chr4.4:10976780-10976799 | MS.gene28049:CDS | 45.0% | |
| TCTCAATGCGGTAAATCAGG+AGG | - | chr4.4:10979259-10979278 | MS.gene28049:CDS | 45.0% | |
| TGTTACCAGGAAGGGTTTGA+AGG | - | chr4.4:10976789-10976808 | MS.gene28049:CDS | 45.0% | |
| TTGAATGAAGACTGCAGCTC+TGG | - | chr4.4:10978608-10978627 | MS.gene28049:intron | 45.0% | |
| ! | AGCCCTGCAATCAGACATTT+TGG | - | chr4.4:10978662-10978681 | MS.gene28049:intron | 45.0% |
| ! | CCGTGTTCTTCACTAGTTTC+AGG | + | chr4.4:10979209-10979228 | None:intergenic | 45.0% |
| ! | GGTCCACCAAATTTGAAGCT+TGG | - | chr4.4:10979280-10979299 | MS.gene28049:CDS | 45.0% |
| ! | GTGGCTGCTTTCATGAAATG+GGG | + | chr4.4:10978254-10978273 | None:intergenic | 45.0% |
| ! | TGGCTGCTTTCATGAAATGG+GGG | + | chr4.4:10978253-10978272 | None:intergenic | 45.0% |
| ! | TTTTCCCCATCTGTATCCAC+GGG | + | chr4.4:10979474-10979493 | None:intergenic | 45.0% |
| !! | ACATTTTGGAGAAGGAGCTG+GGG | - | chr4.4:10978676-10978695 | MS.gene28049:intron | 45.0% |
| !! | AGACATTTTGGAGAAGGAGC+TGG | - | chr4.4:10978674-10978693 | MS.gene28049:intron | 45.0% |
| !! | CGGTTGTTAGGGTTTTGTCT+AGG | - | chr4.4:10976737-10976756 | MS.gene28049:CDS | 45.0% |
| !! | GACATTTTGGAGAAGGAGCT+GGG | - | chr4.4:10978675-10978694 | MS.gene28049:intron | 45.0% |
| !! | TTTTGACTGGTGCGGTGATT+AGG | - | chr4.4:10976608-10976627 | MS.gene28049:intron | 45.0% |
| !!! | TTGGTGGTTGGTGTTTTGAC+TGG | - | chr4.4:10976595-10976614 | MS.gene28049:intron | 45.0% |
| ACCAATCTTGGCAGCTCTAC+AGG | - | chr4.4:10977489-10977508 | MS.gene28049:intron | 50.0% | |
| AGGTTCCTTCAAACCCTTCC+TGG | + | chr4.4:10976797-10976816 | None:intergenic | 50.0% | |
| CATTGTGTTGTGTGTGGGTG+TGG | + | chr4.4:10978932-10978951 | None:intergenic | 50.0% | |
| CGACGGTGAAAGATACGATG+AGG | + | chr4.4:10976501-10976520 | None:intergenic | 50.0% | |
| CTCAGCTGCGAATCTCAATG+CGG | - | chr4.4:10979247-10979266 | MS.gene28049:CDS | 50.0% | |
| CTGTATCCACGGGAAACTTG+AGG | + | chr4.4:10979464-10979483 | None:intergenic | 50.0% | |
| GAACGGTGGGGTTTCTGTTT+CGG | - | chr4.4:10976657-10976676 | MS.gene28049:intron | 50.0% | |
| GAGTTCGAGGAAGGAAAGGA+AGG | + | chr4.4:10976461-10976480 | None:intergenic | 50.0% | |
| GATGAGGGAAGAGAGAAGAG+CGG | + | chr4.4:10976485-10976504 | None:intergenic | 50.0% | |
| GGACGGTGTAGGAAGTGAAA+CGG | + | chr4.4:10976381-10976400 | None:intergenic | 50.0% | |
| GGTGTAGGAAGTGAAACGGT+GGG | + | chr4.4:10976377-10976396 | None:intergenic | 50.0% | |
| GTGTAGGAAGTGAAACGGTG+GGG | + | chr4.4:10976376-10976395 | None:intergenic | 50.0% | |
| GTTTCCCGTGGATACAGATG+GGG | - | chr4.4:10979467-10979486 | MS.gene28049:CDS | 50.0% | |
| TCCTGTAGAGCTGCCAAGAT+TGG | + | chr4.4:10977493-10977512 | None:intergenic | 50.0% | |
| TCTGGCACAGAAGAATTCCG+AGG | - | chr4.4:10978626-10978645 | MS.gene28049:intron | 50.0% | |
| TGCGAAGGCAGGTAAGCTAT+GGG | - | chr4.4:10979175-10979194 | MS.gene28049:CDS | 50.0% | |
| TTGCAGGGCTAATGCTCTTG+CGG | + | chr4.4:10978652-10978671 | None:intergenic | 50.0% | |
| TTGCGAAGGCAGGTAAGCTA+TGG | - | chr4.4:10979174-10979193 | MS.gene28049:CDS | 50.0% | |
| ! | ACGGAAATTTGAGATCGGCG+GGG | + | chr4.4:10976418-10976437 | None:intergenic | 50.0% |
| ! | AGTGGTTTGAGGCTGAGGAT+TGG | + | chr4.4:10976346-10976365 | None:intergenic | 50.0% |
| ! | CGACGGAAATTTGAGATCGG+CGG | + | chr4.4:10976420-10976439 | None:intergenic | 50.0% |
| ! | CGGCGACGGAAATTTGAGAT+CGG | + | chr4.4:10976423-10976442 | None:intergenic | 50.0% |
| ! | GACGGAAATTTGAGATCGGC+GGG | + | chr4.4:10976419-10976438 | None:intergenic | 50.0% |
| ! | TGGAAAGTGGTTTGAGGCTG+AGG | + | chr4.4:10976351-10976370 | None:intergenic | 50.0% |
| ! | TGGAGAGAGACGGTGTTGAA+CGG | - | chr4.4:10976640-10976659 | MS.gene28049:intron | 50.0% |
| !! | CATTTTGGAGAAGGAGCTGG+GGG | - | chr4.4:10978677-10978696 | MS.gene28049:intron | 50.0% |
| !! | GTCTGAACTCTCTGGTTCTG+TGG | - | chr4.4:10979529-10979548 | MS.gene28049:CDS | 50.0% |
| !!! | GGTTGGTGTTTTGACTGGTG+CGG | - | chr4.4:10976600-10976619 | MS.gene28049:intron | 50.0% |
| AAACGGTGGGGTGTGGAAAG+TGG | + | chr4.4:10976364-10976383 | None:intergenic | 55.0% | |
| AAGAGCGGAGAGTTCGAGGA+AGG | + | chr4.4:10976470-10976489 | None:intergenic | 55.0% | |
| AGAGAAGAGCGGAGAGTTCG+AGG | + | chr4.4:10976474-10976493 | None:intergenic | 55.0% | |
| CCAAATTGCAGTCACGGCGA+CGG | + | chr4.4:10976518-10976537 | None:intergenic | 55.0% | |
| CGGAGAGTTCGAGGAAGGAA+AGG | + | chr4.4:10976465-10976484 | None:intergenic | 55.0% | |
| CGGTGTAGGAAGTGAAACGG+TGG | + | chr4.4:10976378-10976397 | None:intergenic | 55.0% | |
| CTCGGAGGACACTACAGTAC+AGG | + | chr4.4:10978354-10978373 | None:intergenic | 55.0% | |
| CTGGTGCGGTGATTAGGAGA+AGG | - | chr4.4:10976614-10976633 | MS.gene28049:intron | 55.0% | |
| CTGTACTGTAGTGTCCTCCG+AGG | - | chr4.4:10978352-10978371 | MS.gene28049:intron | 55.0% | |
| GGAGCTGGGGGAAGTTCAAA+AGG | - | chr4.4:10978689-10978708 | MS.gene28049:intron | 55.0% | |
| GGGGTGTGGAAAGTGGTTTG+AGG | + | chr4.4:10976357-10976376 | None:intergenic | 55.0% | |
| TCGGTAACAGAGTTGCTCCG+TGG | - | chr4.4:10976560-10976579 | MS.gene28049:intron | 55.0% | |
| TGGGGTTTCTGTTTCGGAGG+TGG | - | chr4.4:10976663-10976682 | MS.gene28049:intron | 55.0% | |
| ! | AATTTGAGATCGGCGGGGGA+AGG | + | chr4.4:10976413-10976432 | None:intergenic | 55.0% |
| ! | AGAGACGGTGTTGAACGGTG+GGG | - | chr4.4:10976645-10976664 | MS.gene28049:intron | 55.0% |
| ! | AGAGAGACGGTGTTGAACGG+TGG | - | chr4.4:10976643-10976662 | MS.gene28049:intron | 55.0% |
| ! | CGGAAATTTGAGATCGGCGG+GGG | + | chr4.4:10976417-10976436 | None:intergenic | 55.0% |
| ! | GAGAGACGGTGTTGAACGGT+GGG | - | chr4.4:10976644-10976663 | MS.gene28049:intron | 55.0% |
| AGGGAGCCTCAAGTTTCCCG+TGG | - | chr4.4:10979455-10979474 | MS.gene28049:CDS | 60.0% | |
| CCGTCGCCGTGACTGCAATT+TGG | - | chr4.4:10976515-10976534 | MS.gene28049:intron | 60.0% | |
| CGGTGGGGTTTCTGTTTCGG+AGG | - | chr4.4:10976660-10976679 | MS.gene28049:intron | 60.0% | |
| GGAAGTGAAACGGTGGGGTG+TGG | + | chr4.4:10976371-10976390 | None:intergenic | 60.0% | |
| GGAGTTGGAGTGGACGGTGT+AGG | + | chr4.4:10976392-10976411 | None:intergenic | 60.0% | |
| GGCTAATGCTCTTGCGGCCT+CGG | + | chr4.4:10978646-10978665 | None:intergenic | 60.0% | |
| GGGGAAGGAGTTGGAGTGGA+CGG | + | chr4.4:10976398-10976417 | None:intergenic | 60.0% | |
| AGATCGGCGGGGGAAGGAGT+TGG | + | chr4.4:10976407-10976426 | None:intergenic | 65.0% | |
| GGGTGTGGGTGTGCGTAGGT+GGG | + | chr4.4:10978917-10978936 | None:intergenic | 65.0% | |
| GTGTGGGTGTGGGTGTGCGT+AGG | + | chr4.4:10978921-10978940 | None:intergenic | 65.0% | |
| TGGGTGTGGGTGTGCGTAGG+TGG | + | chr4.4:10978918-10978937 | None:intergenic | 65.0% | |
| GGCGGGGGAAGGAGTTGGAG+TGG | + | chr4.4:10976402-10976421 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10976253 | 10979710 | 10976253 | ID=MS.gene28049 |
| chr4.4 | mRNA | 10976253 | 10979710 | 10976253 | ID=MS.gene28049.t1;Parent=MS.gene28049 |
| chr4.4 | exon | 10979138 | 10979710 | 10979138 | ID=MS.gene28049.t1.exon1;Parent=MS.gene28049.t1 |
| chr4.4 | CDS | 10979138 | 10979710 | 10979138 | ID=cds.MS.gene28049.t1;Parent=MS.gene28049.t1 |
| chr4.4 | exon | 10977235 | 10977345 | 10977235 | ID=MS.gene28049.t1.exon2;Parent=MS.gene28049.t1 |
| chr4.4 | CDS | 10977235 | 10977345 | 10977235 | ID=cds.MS.gene28049.t1;Parent=MS.gene28049.t1 |
| chr4.4 | exon | 10976683 | 10976826 | 10976683 | ID=MS.gene28049.t1.exon3;Parent=MS.gene28049.t1 |
| chr4.4 | CDS | 10976683 | 10976826 | 10976683 | ID=cds.MS.gene28049.t1;Parent=MS.gene28049.t1 |
| chr4.4 | exon | 10976253 | 10976354 | 10976253 | ID=MS.gene28049.t1.exon4;Parent=MS.gene28049.t1 |
| chr4.4 | CDS | 10976253 | 10976354 | 10976253 | ID=cds.MS.gene28049.t1;Parent=MS.gene28049.t1 |
| Gene Sequence |
| Protein sequence |
