Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28159.t1 | XP_003630121.1 | 97.5 | 244 | 6 | 0 | 1 | 244 | 1 | 244 | 2.40E-121 | 444.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28159.t1 | Q9SJ12 | 68.9 | 244 | 72 | 2 | 1 | 244 | 1 | 240 | 8.2e-86 | 318.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28159.t1 | B7FH20 | 97.5 | 244 | 6 | 0 | 1 | 244 | 1 | 244 | 1.7e-121 | 444.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04984 | MS.gene28159 | 0.803268 | 3.78E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene28159 | 0.824277 | 8.81E-54 | -1.69E-46 |
| MS.gene050114 | MS.gene28159 | 0.835826 | 1.34E-56 | -1.69E-46 |
| MS.gene050277 | MS.gene28159 | 0.838955 | 2.11E-57 | -1.69E-46 |
| MS.gene050317 | MS.gene28159 | 0.81526 | 1.01E-51 | -1.69E-46 |
| MS.gene050439 | MS.gene28159 | 0.803215 | 3.88E-49 | -1.69E-46 |
| MS.gene050838 | MS.gene28159 | 0.865467 | 5.78E-65 | -1.69E-46 |
| MS.gene051063 | MS.gene28159 | 0.829661 | 4.54E-55 | -1.69E-46 |
| MS.gene051245 | MS.gene28159 | 0.837279 | 5.71E-57 | -1.69E-46 |
| MS.gene051746 | MS.gene28159 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene051748 | MS.gene28159 | 0.845164 | 4.82E-59 | -1.69E-46 |
| MS.gene051756 | MS.gene28159 | 0.855781 | 5.01E-62 | -1.69E-46 |
| MS.gene051757 | MS.gene28159 | 0.860201 | 2.44E-63 | -1.69E-46 |
| MS.gene051850 | MS.gene28159 | 0.861423 | 1.04E-63 | -1.69E-46 |
| MS.gene051903 | MS.gene28159 | 0.837796 | 4.21E-57 | -1.69E-46 |
| MS.gene052202 | MS.gene28159 | 0.818163 | 2.26E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene28159 | 0.800174 | 1.63E-48 | -1.69E-46 |
| MS.gene052856 | MS.gene28159 | 0.81589 | 7.33E-52 | -1.69E-46 |
| MS.gene053109 | MS.gene28159 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene28159 | 0.815861 | 7.44E-52 | -1.69E-46 |
| MS.gene053952 | MS.gene28159 | 0.814807 | 1.28E-51 | -1.69E-46 |
| MS.gene055424 | MS.gene28159 | 0.856757 | 2.59E-62 | -1.69E-46 |
| MS.gene055441 | MS.gene28159 | 0.810716 | 1.00E-50 | -1.69E-46 |
| MS.gene055591 | MS.gene28159 | -0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene056432 | MS.gene28159 | 0.856252 | 3.65E-62 | -1.69E-46 |
| MS.gene056580 | MS.gene28159 | 0.821169 | 4.66E-53 | -1.69E-46 |
| MS.gene056631 | MS.gene28159 | 0.815315 | 9.85E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene28159 | 0.815738 | 7.93E-52 | -1.69E-46 |
| MS.gene056992 | MS.gene28159 | 0.804183 | 2.44E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene28159 | 0.826382 | 2.80E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene28159 | 0.891197 | 4.95E-74 | -1.69E-46 |
| MS.gene057140 | MS.gene28159 | 0.833301 | 5.77E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene28159 | 0.858846 | 6.22E-63 | -1.69E-46 |
| MS.gene058054 | MS.gene28159 | 0.817951 | 2.53E-52 | -1.69E-46 |
| MS.gene058055 | MS.gene28159 | 0.853152 | 2.89E-61 | -1.69E-46 |
| MS.gene05809 | MS.gene28159 | 0.837413 | 5.28E-57 | -1.69E-46 |
| MS.gene058182 | MS.gene28159 | 0.807515 | 4.87E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene28159 | 0.829704 | 4.44E-55 | -1.69E-46 |
| MS.gene058654 | MS.gene28159 | 0.802455 | 5.56E-49 | -1.69E-46 |
| MS.gene058758 | MS.gene28159 | 0.809552 | 1.79E-50 | -1.69E-46 |
| MS.gene05880 | MS.gene28159 | 0.828113 | 1.08E-54 | -1.69E-46 |
| MS.gene058906 | MS.gene28159 | 0.903938 | 2.07E-79 | -1.69E-46 |
| MS.gene059171 | MS.gene28159 | 0.828402 | 9.17E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene28159 | 0.876624 | 1.20E-68 | -1.69E-46 |
| MS.gene060463 | MS.gene28159 | 0.825342 | 4.94E-54 | -1.69E-46 |
| MS.gene060465 | MS.gene28159 | 0.831624 | 1.50E-55 | -1.69E-46 |
| MS.gene061055 | MS.gene28159 | 0.818139 | 2.29E-52 | -1.69E-46 |
| MS.gene061145 | MS.gene28159 | 0.837271 | 5.74E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28159.t1 | MTR_8g092040 | 97.541 | 244 | 6 | 0 | 1 | 244 | 1 | 244 | 5.83e-170 | 468 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28159.t1 | AT2G21870 | 68.852 | 244 | 72 | 2 | 1 | 244 | 1 | 240 | 9.88e-117 | 333 |
| MS.gene28159.t1 | AT2G21870 | 69.058 | 223 | 66 | 1 | 1 | 223 | 1 | 220 | 1.84e-107 | 309 |
Find 61 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTTATCATTTCTCAAT+AGG | 0.249875 | 4.4:+9677599 | None:intergenic |
| AAATGAGGAACAAACCAATT+TGG | 0.277914 | 4.4:+9680068 | None:intergenic |
| TTTCTTATCATTTCTCAATA+GGG | 0.290599 | 4.4:+9677600 | None:intergenic |
| GCAACGGGAGTTTGCTGTTC+CGG | 0.291400 | 4.4:-9679558 | MS.gene28159:CDS |
| GGAACAAACCAATTTGGATT+TGG | 0.309292 | 4.4:+9680074 | None:intergenic |
| CCTCGCATCCAAATCCAAAT+TGG | 0.317568 | 4.4:-9680082 | MS.gene28159:intron |
| CGGTTCGCCACTTTGCTAAA+GGG | 0.331571 | 4.4:-9679538 | MS.gene28159:CDS |
| GAAAGGAATGGACCTTCTTT+TGG | 0.332132 | 4.4:-9677581 | MS.gene28159:CDS |
| GGCTTTAATGTTTGATGCAT+TGG | 0.345705 | 4.4:-9677650 | MS.gene28159:CDS |
| GTCCGAACTTCCTGCCCTTA+AGG | 0.348865 | 4.4:-9679507 | MS.gene28159:CDS |
| CCGGTTCGCCACTTTGCTAA+AGG | 0.349850 | 4.4:-9679539 | MS.gene28159:CDS |
| CTTGGTTCTTATTTCCTTCA+AGG | 0.354224 | 4.4:+9678846 | None:intergenic |
| TTACTCTTGGTATAGCTGTA+TGG | 0.355475 | 4.4:-9679596 | MS.gene28159:intron |
| AGACTGCCATCGGAATATTA+AGG | 0.383428 | 4.4:-9679186 | MS.gene28159:CDS |
| GGAACTCACCGTCTCCCTTA+AGG | 0.389313 | 4.4:+9679492 | None:intergenic |
| TCCCTTAAGGGCAGGAAGTT+CGG | 0.389587 | 4.4:+9679505 | None:intergenic |
| GCAGCTGGAGGAGTTGAAAA+AGG | 0.399996 | 4.4:-9676911 | MS.gene28159:CDS |
| GAAACAGCAGCTGGATCCTC+TGG | 0.403842 | 4.4:+9679142 | None:intergenic |
| AAAAGATAAGTTCGAGCATC+AGG | 0.404959 | 4.4:+9678871 | None:intergenic |
| TCCGAACTTCCTGCCCTTAA+GGG | 0.407807 | 4.4:-9679506 | MS.gene28159:CDS |
| TCCAGCTGCTCTTCGTACTT+TGG | 0.409891 | 4.4:+9676952 | None:intergenic |
| CAACTCCTCCAGCTGCGCTT+TGG | 0.413594 | 4.4:+9676918 | None:intergenic |
| TGGTCAAATGCTTCTGCAAC+GGG | 0.416121 | 4.4:-9679573 | MS.gene28159:CDS |
| CCATTTCAGGGAGGAATTCA+AGG | 0.418093 | 4.4:-9676489 | MS.gene28159:intron |
| GAACTCACCGTCTCCCTTAA+GGG | 0.425131 | 4.4:+9679493 | None:intergenic |
| TAAAATAGCCAAAGCGCAGC+TGG | 0.425620 | 4.4:-9676926 | MS.gene28159:CDS |
| TGCATTGGAGAAAATTGAAA+AGG | 0.441090 | 4.4:-9677635 | MS.gene28159:CDS |
| GGCAGGAAGTTCGGACCCTT+CGG | 0.446173 | 4.4:+9679514 | None:intergenic |
| TTCTTATCATTTCTCAATAG+GGG | 0.468292 | 4.4:+9677601 | None:intergenic |
| CCTTTAGCAAAGTGGCGAAC+CGG | 0.468347 | 4.4:+9679539 | None:intergenic |
| ACGTCAAAACTTTGGACATC+CGG | 0.475716 | 4.4:-9676448 | MS.gene28159:CDS |
| AGAGGTCTTACAGATGATCT+TGG | 0.479321 | 4.4:-9677679 | MS.gene28159:CDS |
| AGCTGGATCCTCTGGAGCTA+TGG | 0.481115 | 4.4:+9679150 | None:intergenic |
| GGCGGTTGACGTCAAAACTT+TGG | 0.482257 | 4.4:-9676456 | MS.gene28159:CDS |
| GCCAAAGTACGAAGAGCAGC+TGG | 0.499498 | 4.4:-9676953 | MS.gene28159:CDS |
| CAATGGAAACTCAAAAGAAA+AGG | 0.507343 | 4.4:-9676876 | MS.gene28159:intron |
| CTCCTTCCTTAATATTCCGA+TGG | 0.511981 | 4.4:+9679180 | None:intergenic |
| CACTTTGCTAAAGGGTCCGA+AGG | 0.513405 | 4.4:-9679530 | MS.gene28159:CDS |
| CAGGGCAAACTTGTTGTCAG+TGG | 0.523119 | 4.4:-9678938 | MS.gene28159:CDS |
| TATCAAACTCTGCCAAAAGA+AGG | 0.529881 | 4.4:+9677569 | None:intergenic |
| AAAGGATGCTGTTGAGGCAA+TGG | 0.541346 | 4.4:-9676893 | MS.gene28159:CDS |
| GAGAAATGATAAGAAAGGAA+TGG | 0.544368 | 4.4:-9677593 | MS.gene28159:CDS |
| TCACCGTCTCCCTTAAGGGC+AGG | 0.548905 | 4.4:+9679497 | None:intergenic |
| GCATATTGAGAAACAGCAGC+TGG | 0.566573 | 4.4:+9679133 | None:intergenic |
| GTGGTCAAATGCTTCTGCAA+CGG | 0.569422 | 4.4:-9679574 | MS.gene28159:CDS |
| AACAAATTTGAGACTGCCAT+CGG | 0.570816 | 4.4:-9679196 | MS.gene28159:CDS |
| TACAGATGATCTTGGAGCAG+AGG | 0.572998 | 4.4:-9677671 | MS.gene28159:CDS |
| CTCTTGGTATAGCTGTATGG+TGG | 0.584302 | 4.4:-9679593 | MS.gene28159:intron |
| TGCTGTTTCTCAATATGCGA+AGG | 0.586233 | 4.4:-9679128 | MS.gene28159:CDS |
| CTTCGGACCCTTTAGCAAAG+TGG | 0.597464 | 4.4:+9679531 | None:intergenic |
| GTCAGTGGCTCAAGATGTCA+AGG | 0.601887 | 4.4:-9678923 | MS.gene28159:CDS |
| CCAATTTGGATTTGGATGCG+AGG | 0.606244 | 4.4:+9680082 | None:intergenic |
| GAAGATCACCATAGCTCCAG+AGG | 0.616565 | 4.4:-9679158 | MS.gene28159:CDS |
| CTTCCTGCCCTTAAGGGAGA+CGG | 0.620584 | 4.4:-9679500 | MS.gene28159:intron |
| TGCCATCGGAATATTAAGGA+AGG | 0.622802 | 4.4:-9679182 | MS.gene28159:CDS |
| GGAATTCAAGGATGAGCCTG+CGG | 0.631780 | 4.4:-9676477 | MS.gene28159:CDS |
| CTATTGAGAAATGATAAGAA+AGG | 0.632519 | 4.4:-9677598 | MS.gene28159:CDS |
| AATAGCCAAAGCGCAGCTGG+AGG | 0.651823 | 4.4:-9676923 | MS.gene28159:CDS |
| ATTCAAGGATGAGCCTGCGG+CGG | 0.666945 | 4.4:-9676474 | MS.gene28159:CDS |
| GAGGCGTGAAGCGAGTGCCA+TGG | 0.683570 | 4.4:+9680101 | None:intergenic |
| ACTTTGCTAAAGGGTCCGAA+GGG | 0.685539 | 4.4:-9679529 | MS.gene28159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAATAACAATTC+AGG | + | chr4.4:9678635-9678654 | None:intergenic | 10.0% |
| !! | ATAATAATAATAACAATTCA+GGG | + | chr4.4:9678634-9678653 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAAAAAAAAGC+AGG | + | chr4.4:9679782-9679801 | None:intergenic | 10.0% |
| !! | TTTATTAAATTAAATGTGTT+GGG | - | chr4.4:9676861-9676880 | MS.gene28159:intron | 10.0% |
| !!! | AAAAAATAATTTTTATGATG+AGG | + | chr4.4:9676789-9676808 | None:intergenic | 10.0% |
| !!! | GATTTTTAAATATTATTTTC+TGG | - | chr4.4:9679106-9679125 | MS.gene28159:CDS | 10.0% |
| !!! | TATAATTACTTTACTTATTT+TGG | - | chr4.4:9679491-9679510 | MS.gene28159:intron | 10.0% |
| !! | AAAAAGAATAGAAATGAAAT+CGG | + | chr4.4:9676512-9676531 | None:intergenic | 15.0% |
| !! | AGGAAAAATAAATCATATAA+TGG | + | chr4.4:9680020-9680039 | None:intergenic | 15.0% |
| !! | GATAAATAATTAAACACTAT+AGG | + | chr4.4:9679443-9679462 | None:intergenic | 15.0% |
| !! | GTTTATTAAATTAAATGTGT+TGG | - | chr4.4:9676860-9676879 | MS.gene28159:intron | 15.0% |
| !!! | TGTTTCAAATCAAATATTTT+AGG | - | chr4.4:9678137-9678156 | MS.gene28159:intron | 15.0% |
| !! | AATAACCTAATTAGACAAAA+GGG | + | chr4.4:9676700-9676719 | None:intergenic | 20.0% |
| !! | ATATATACAAATGAGAGAAA+AGG | - | chr4.4:9678746-9678765 | MS.gene28159:intron | 20.0% |
| !! | ATTTAAATGTTTACTTTGCT+AGG | - | chr4.4:9679411-9679430 | MS.gene28159:intron | 20.0% |
| !! | ATTTCTATTGAAAATCAAAG+TGG | + | chr4.4:9677225-9677244 | None:intergenic | 20.0% |
| !! | TAATAACCTAATTAGACAAA+AGG | + | chr4.4:9676701-9676720 | None:intergenic | 20.0% |
| !! | TATACCAAGAGTAAAAAATT+GGG | + | chr4.4:9676933-9676952 | None:intergenic | 20.0% |
| !! | TATATACAAATGAGAGAAAA+GGG | - | chr4.4:9678747-9678766 | MS.gene28159:intron | 20.0% |
| !! | TTTAAATGTTTACTTTGCTA+GGG | - | chr4.4:9679412-9679431 | MS.gene28159:intron | 20.0% |
| !! | TTTCTTATCATTTCTCAATA+GGG | + | chr4.4:9678938-9678957 | None:intergenic | 20.0% |
| !!! | AAATTAACTGATTTTTCCAT+TGG | - | chr4.4:9676642-9676661 | MS.gene28159:intron | 20.0% |
| !!! | ATATTTTTTGTTTCGAATAG+TGG | + | chr4.4:9676617-9676636 | None:intergenic | 20.0% |
| !!! | TATATTATATGAGTATCGTA+GGG | - | chr4.4:9677090-9677109 | MS.gene28159:intron | 20.0% |
| !!! | TTATATTATATGAGTATCGT+AGG | - | chr4.4:9677089-9677108 | MS.gene28159:intron | 20.0% |
| ! | AAAATACAAGTCCAAAGTAA+AGG | + | chr4.4:9677069-9677088 | None:intergenic | 25.0% |
| ! | AAAATAGAACATCACATACT+TGG | + | chr4.4:9677710-9677729 | None:intergenic | 25.0% |
| ! | AAAGATTACGAGATATAAGT+TGG | + | chr4.4:9677510-9677529 | None:intergenic | 25.0% |
| ! | AAATACAAGTCCAAAGTAAA+GGG | + | chr4.4:9677068-9677087 | None:intergenic | 25.0% |
| ! | AACTAAATTGAATCCACAAA+AGG | + | chr4.4:9679364-9679383 | None:intergenic | 25.0% |
| ! | AATCGAGATTTAGGAAATAT+GGG | - | chr4.4:9678427-9678446 | MS.gene28159:intron | 25.0% |
| ! | AGACTATGATAAAAACAACA+AGG | + | chr4.4:9677471-9677490 | None:intergenic | 25.0% |
| ! | CAACAACAAAAAAAATCAGT+AGG | + | chr4.4:9676899-9676918 | None:intergenic | 25.0% |
| ! | CTATACCAAGAGTAAAAAAT+TGG | + | chr4.4:9676934-9676953 | None:intergenic | 25.0% |
| ! | CTATTGAGAAATGATAAGAA+AGG | - | chr4.4:9678937-9678956 | MS.gene28159:CDS | 25.0% |
| ! | CTTTCTTATCATTTCTCAAT+AGG | + | chr4.4:9678939-9678958 | None:intergenic | 25.0% |
| ! | GAAAAAAGAAGAGAGAATAT+AGG | - | chr4.4:9678266-9678285 | MS.gene28159:intron | 25.0% |
| ! | GATGCTGAAAAACATTTATT+TGG | - | chr4.4:9677308-9677327 | MS.gene28159:intron | 25.0% |
| ! | TATCATTTCAATCGAGATTT+AGG | - | chr4.4:9678418-9678437 | MS.gene28159:intron | 25.0% |
| ! | TATGTTGTCATGCAATTTAA+CGG | - | chr4.4:9679062-9679081 | MS.gene28159:intron | 25.0% |
| ! | TGATAAAAACAACAAGGTAA+AGG | + | chr4.4:9677465-9677484 | None:intergenic | 25.0% |
| ! | TGATTTATGCAAAGAAGAAA+AGG | - | chr4.4:9677194-9677213 | MS.gene28159:intron | 25.0% |
| ! | TGGAATATATGAATTTCACA+TGG | - | chr4.4:9679908-9679927 | MS.gene28159:intron | 25.0% |
| ! | TTCTTATCATTTCTCAATAG+GGG | + | chr4.4:9678937-9678956 | None:intergenic | 25.0% |
| !! | TATTTTGCCTCCTAAAATAA+GGG | + | chr4.4:9679699-9679718 | None:intergenic | 25.0% |
| !! | TCAAGTCTTGTAATTTATGA+AGG | - | chr4.4:9679233-9679252 | MS.gene28159:intron | 25.0% |
| !! | TGAAATGATCATTTTACATG+AGG | + | chr4.4:9679151-9679170 | None:intergenic | 25.0% |
| !! | TTATTCCCTTTTGTCTAATT+AGG | - | chr4.4:9676692-9676711 | MS.gene28159:intron | 25.0% |
| !! | TTTCCAAATATTGCATTTTG+TGG | - | chr4.4:9679280-9679299 | MS.gene28159:intron | 25.0% |
| !!! | AATTTCAGTATTTTTGACGA+AGG | + | chr4.4:9678108-9678127 | None:intergenic | 25.0% |
| !!! | ATTTTTCTACTTATCGATTG+AGG | - | chr4.4:9677985-9678004 | MS.gene28159:intron | 25.0% |
| !!! | TCTTCTTTTTTCTGTTTCAT+CGG | + | chr4.4:9678258-9678277 | None:intergenic | 25.0% |
| !!! | TTATTTTGCCTCCTAAAATA+AGG | + | chr4.4:9679700-9679719 | None:intergenic | 25.0% |
| !!! | TTTTTCTACTTATCGATTGA+GGG | - | chr4.4:9677986-9678005 | MS.gene28159:intron | 25.0% |
| AAAAAAAAAGCAGGAGAATC+AGG | + | chr4.4:9679773-9679792 | None:intergenic | 30.0% | |
| AAAAAAAAGCAGGAGAATCA+GGG | + | chr4.4:9679772-9679791 | None:intergenic | 30.0% | |
| AAATGAGGAACAAACCAATT+TGG | + | chr4.4:9676470-9676489 | None:intergenic | 30.0% | |
| AATACAAGTCCAAAGTAAAG+GGG | + | chr4.4:9677067-9677086 | None:intergenic | 30.0% | |
| AATCAGTACCATAAGAAAGA+AGG | - | chr4.4:9678229-9678248 | MS.gene28159:intron | 30.0% | |
| AGAACCACATGTTTAAAAGA+AGG | + | chr4.4:9678567-9678586 | None:intergenic | 30.0% | |
| AGCTTGAAAAGATACAACAT+AGG | + | chr4.4:9679018-9679037 | None:intergenic | 30.0% | |
| AGTAGTATAAAATGTCCCTA+TGG | - | chr4.4:9679875-9679894 | MS.gene28159:intron | 30.0% | |
| ATCGAGATTTAGGAAATATG+GGG | - | chr4.4:9678428-9678447 | MS.gene28159:intron | 30.0% | |
| ATGCCAGAAACTCTAATATT+GGG | - | chr4.4:9676554-9676573 | MS.gene28159:intron | 30.0% | |
| ATGTTGTCATGCAATTTAAC+GGG | - | chr4.4:9679063-9679082 | MS.gene28159:intron | 30.0% | |
| ATTCCAAATTCAAAAGCCAT+AGG | + | chr4.4:9679894-9679913 | None:intergenic | 30.0% | |
| ATTTGAGCAGAATGAATTAC+TGG | - | chr4.4:9679466-9679485 | MS.gene28159:intron | 30.0% | |
| CAACAAAAAAAATCAGTAGG+TGG | + | chr4.4:9676896-9676915 | None:intergenic | 30.0% | |
| CAATCGAGATTTAGGAAATA+TGG | - | chr4.4:9678426-9678445 | MS.gene28159:intron | 30.0% | |
| CAATGGAAACTCAAAAGAAA+AGG | - | chr4.4:9679659-9679678 | MS.gene28159:intron | 30.0% | |
| CAGAAGTTAGAACTTAGAAA+TGG | + | chr4.4:9679735-9679754 | None:intergenic | 30.0% | |
| CCTATTTCCAACAAATCAAT+TGG | + | chr4.4:9679935-9679954 | None:intergenic | 30.0% | |
| CTATCTTCAAAGTTAGAATC+AGG | + | chr4.4:9679857-9679876 | None:intergenic | 30.0% | |
| CTTATTTACTAGTTGCATTG+CGG | - | chr4.4:9676816-9676835 | MS.gene28159:intron | 30.0% | |
| GAGAAATGATAAGAAAGGAA+TGG | - | chr4.4:9678942-9678961 | MS.gene28159:intron | 30.0% | |
| GAGAATATAGGATAAGCTTA+AGG | - | chr4.4:9678278-9678297 | MS.gene28159:intron | 30.0% | |
| GAGAATGAATAGAAGAAATG+AGG | + | chr4.4:9676485-9676504 | None:intergenic | 30.0% | |
| GCACATCATCTAGTTAAAAA+TGG | + | chr4.4:9677738-9677757 | None:intergenic | 30.0% | |
| GTTTGAAAAGGACAACTAAT+CGG | + | chr4.4:9678703-9678722 | None:intergenic | 30.0% | |
| TCACATTTGCTCATATATCT+GGG | - | chr4.4:9678817-9678836 | MS.gene28159:intron | 30.0% | |
| TCATCAATTATCATTAGCCA+TGG | - | chr4.4:9676763-9676782 | MS.gene28159:intron | 30.0% | |
| TCTCGATTGAAATGATATCA+TGG | + | chr4.4:9678415-9678434 | None:intergenic | 30.0% | |
| TGCATTGGAGAAAATTGAAA+AGG | - | chr4.4:9678900-9678919 | MS.gene28159:CDS | 30.0% | |
| TGGAAATAGGACTATTGTTA+TGG | - | chr4.4:9679945-9679964 | MS.gene28159:intron | 30.0% | |
| TTCCAAATTCAAAAGCCATA+GGG | + | chr4.4:9679893-9679912 | None:intergenic | 30.0% | |
| TTTGAAAAGGACAACTAATC+GGG | + | chr4.4:9678702-9678721 | None:intergenic | 30.0% | |
| TTTGAGCAGAATGAATTACT+GGG | - | chr4.4:9679467-9679486 | MS.gene28159:intron | 30.0% | |
| ! | AACTTATCTTTTGACCTTGA+AGG | - | chr4.4:9677675-9677694 | MS.gene28159:CDS | 30.0% |
| ! | TAATTTTTATGATGAGGCCA+TGG | + | chr4.4:9676783-9676802 | None:intergenic | 30.0% |
| !! | ATTTTGTTGTGCATTCTTCA+GGG | - | chr4.4:9677579-9677598 | MS.gene28159:CDS | 30.0% |
| !! | CCAATTGATTTGTTGGAAAT+AGG | - | chr4.4:9679932-9679951 | MS.gene28159:intron | 30.0% |
| !! | TCAGGGTATTCATAATTTTG+AGG | + | chr4.4:9678617-9678636 | None:intergenic | 30.0% |
| !! | TTTGATTTGAAACACACTAC+TGG | + | chr4.4:9678131-9678150 | None:intergenic | 30.0% |
| !!! | TTGAATGCTAGCTTTTGTTT+CGG | - | chr4.4:9679386-9679405 | MS.gene28159:intron | 30.0% |
| AAAAGATAAGTTCGAGCATC+AGG | + | chr4.4:9677667-9677686 | None:intergenic | 35.0% | |
| AAATGTTTACTTTGCTAGGG+AGG | - | chr4.4:9679415-9679434 | MS.gene28159:intron | 35.0% | |
| AAGAATGCACAACAAAATGC+AGG | + | chr4.4:9677577-9677596 | None:intergenic | 35.0% | |
| ACAGACACAACTACATTAAG+TGG | + | chr4.4:9678535-9678554 | None:intergenic | 35.0% | |
| AGATTTAGGAAATATGGGGA+AGG | - | chr4.4:9678432-9678451 | MS.gene28159:intron | 35.0% | |
| ATCGGTTACCTTCTTTCTTA+TGG | + | chr4.4:9678240-9678259 | None:intergenic | 35.0% | |
| CAGCCACAAAATGCAATATT+TGG | + | chr4.4:9679286-9679305 | None:intergenic | 35.0% | |
| CATGCCAGAAACTCTAATAT+TGG | - | chr4.4:9676553-9676572 | MS.gene28159:intron | 35.0% | |
| CGGGATACTTTCTATATGTT+TGG | - | chr4.4:9679082-9679101 | MS.gene28159:intron | 35.0% | |
| CTGGCATGAAAATCAGAAAT+TGG | + | chr4.4:9676541-9676560 | None:intergenic | 35.0% | |
| GATCCCAATATTAGAGTTTC+TGG | + | chr4.4:9676560-9676579 | None:intergenic | 35.0% | |
| GGAACAAACCAATTTGGATT+TGG | + | chr4.4:9676464-9676483 | None:intergenic | 35.0% | |
| GTCACATTTGCTCATATATC+TGG | - | chr4.4:9678816-9678835 | MS.gene28159:intron | 35.0% | |
| TACCTTTCTTCTCATTGTCA+AGG | - | chr4.4:9677904-9677923 | MS.gene28159:intron | 35.0% | |
| TATCAAACTCTGCCAAAAGA+AGG | + | chr4.4:9678969-9678988 | None:intergenic | 35.0% | |
| TATCTCCAGTGTTAAATCTC+CGG | - | chr4.4:9678361-9678380 | MS.gene28159:intron | 35.0% | |
| TCAAAGGGTGAAAAAACAAC+AGG | + | chr4.4:9679524-9679543 | None:intergenic | 35.0% | |
| TCTTAACACTCGAAATCCAA+TGG | + | chr4.4:9676661-9676680 | None:intergenic | 35.0% | |
| TTACTCTTGGTATAGCTGTA+TGG | - | chr4.4:9676939-9676958 | MS.gene28159:CDS | 35.0% | |
| TTCGAATTCCAAGTCTAAGA+TGG | + | chr4.4:9679552-9679571 | None:intergenic | 35.0% | |
| ! | AACAAATTTGAGACTGCCAT+CGG | - | chr4.4:9677339-9677358 | MS.gene28159:intron | 35.0% |
| ! | AACGCCTTCTTTTAAACATG+TGG | - | chr4.4:9678560-9678579 | MS.gene28159:intron | 35.0% |
| ! | ATCTGGGTACATTTCTTTTC+AGG | - | chr4.4:9678833-9678852 | MS.gene28159:intron | 35.0% |
| ! | CGAATAGTGGAATTGAGAAT+CGG | + | chr4.4:9676604-9676623 | None:intergenic | 35.0% |
| ! | CTTGGTTCTTATTTCCTTCA+AGG | + | chr4.4:9677692-9677711 | None:intergenic | 35.0% |
| ! | GGCTTTAATGTTTGATGCAT+TGG | - | chr4.4:9678885-9678904 | MS.gene28159:CDS | 35.0% |
| !! | ACATGGACCAATTGATTTGT+TGG | - | chr4.4:9679925-9679944 | MS.gene28159:intron | 35.0% |
| !! | AGTATTTTTGACGAAGGTGT+GGG | + | chr4.4:9678102-9678121 | None:intergenic | 35.0% |
| !! | CATTTTGTTGTGCATTCTTC+AGG | - | chr4.4:9677578-9677597 | MS.gene28159:CDS | 35.0% |
| !!! | GGTACTGATTGTTTTGACTT+GGG | + | chr4.4:9678219-9678238 | None:intergenic | 35.0% |
| !!! | GTTGTTTTTTCACCCTTTGA+TGG | - | chr4.4:9679524-9679543 | MS.gene28159:CDS | 35.0% |
| !!! | TGGTACTGATTGTTTTGACT+TGG | + | chr4.4:9678220-9678239 | None:intergenic | 35.0% |
| !!! | TGTGCCCAATTTTTTACTCT+TGG | - | chr4.4:9676926-9676945 | MS.gene28159:CDS | 35.0% |
| AAACACCTTTGTTAAGCGCA+TGG | - | chr4.4:9679812-9679831 | MS.gene28159:intron | 40.0% | |
| AAGGGTGAAAAAACAACAGG+AGG | + | chr4.4:9679521-9679540 | None:intergenic | 40.0% | |
| ACAGATACAGAGTGATTAGG+AGG | + | chr4.4:9678062-9678081 | None:intergenic | 40.0% | |
| ACGTCAAAACTTTGGACATC+CGG | - | chr4.4:9680087-9680106 | MS.gene28159:CDS | 40.0% | |
| AGACTGCCATCGGAATATTA+AGG | - | chr4.4:9677349-9677368 | MS.gene28159:intron | 40.0% | |
| AGAGGTCTTACAGATGATCT+TGG | - | chr4.4:9678856-9678875 | MS.gene28159:CDS | 40.0% | |
| ATATGGGGAAGGATTTAGCA+TGG | - | chr4.4:9678443-9678462 | MS.gene28159:intron | 40.0% | |
| CACCTTGACAATGAGAAGAA+AGG | + | chr4.4:9677909-9677928 | None:intergenic | 40.0% | |
| CAGATACAGAGTGATTAGGA+GGG | + | chr4.4:9678061-9678080 | None:intergenic | 40.0% | |
| CTCCTTCCTTAATATTCCGA+TGG | + | chr4.4:9677358-9677377 | None:intergenic | 40.0% | |
| GAACACCATAGAATCTAGTG+AGG | - | chr4.4:9678469-9678488 | MS.gene28159:intron | 40.0% | |
| GCACGCACATAAGTTTGAAA+AGG | + | chr4.4:9678715-9678734 | None:intergenic | 40.0% | |
| GTTGAAAAAGGATGCTGTTG+AGG | - | chr4.4:9679636-9679655 | MS.gene28159:intron | 40.0% | |
| TATAGTCTATCCTCTATGCG+TGG | - | chr4.4:9679324-9679343 | MS.gene28159:intron | 40.0% | |
| TCTTAAGGTGGTGTCTAACA+TGG | - | chr4.4:9677934-9677953 | MS.gene28159:intron | 40.0% | |
| TGAAGCCTCACTAGATTCTA+TGG | + | chr4.4:9678477-9678496 | None:intergenic | 40.0% | |
| TGCCATCGGAATATTAAGGA+AGG | - | chr4.4:9677353-9677372 | MS.gene28159:intron | 40.0% | |
| TGGTGTCTAACATGGACAAT+CGG | - | chr4.4:9677942-9677961 | MS.gene28159:intron | 40.0% | |
| TTTAACACTGGAGATACTCC+AGG | + | chr4.4:9678357-9678376 | None:intergenic | 40.0% | |
| TTTGCCTCCTAAAATAAGGG+TGG | + | chr4.4:9679696-9679715 | None:intergenic | 40.0% | |
| ! | GAAAGGAATGGACCTTCTTT+TGG | - | chr4.4:9678954-9678973 | MS.gene28159:intron | 40.0% |
| ! | GTCCCTATGGCTTTTGAATT+TGG | - | chr4.4:9679888-9679907 | MS.gene28159:intron | 40.0% |
| ! | GTGGTCAATTGTTCCTTTTG+TGG | - | chr4.4:9679348-9679367 | MS.gene28159:intron | 40.0% |
| ! | TCTAAGATGGCACCATCAAA+GGG | + | chr4.4:9679539-9679558 | None:intergenic | 40.0% |
| ! | TGTCAAGGTGCTTTCTCTTA+AGG | - | chr4.4:9677919-9677938 | MS.gene28159:intron | 40.0% |
| ! | TTTCCTTGTCTGCCATTTCA+GGG | - | chr4.4:9680034-9680053 | MS.gene28159:intron | 40.0% |
| ! | TTTGTGTCTGAGACAGTGAT+AGG | - | chr4.4:9677115-9677134 | MS.gene28159:intron | 40.0% |
| !! | CAGTATTTTTGACGAAGGTG+TGG | + | chr4.4:9678103-9678122 | None:intergenic | 40.0% |
| !! | GGAGAAAACTATGGTGTTGT+GGG | + | chr4.4:9678034-9678053 | None:intergenic | 40.0% |
| !! | GGTACATTTCTTTTCAGGAG+AGG | - | chr4.4:9678838-9678857 | MS.gene28159:intron | 40.0% |
| !! | GTATTTTTGACGAAGGTGTG+GGG | + | chr4.4:9678101-9678120 | None:intergenic | 40.0% |
| !! | TATTTTTGACGAAGGTGTGG+GGG | + | chr4.4:9678100-9678119 | None:intergenic | 40.0% |
| !! | TGCTGTTTCTCAATATGCGA+AGG | - | chr4.4:9677407-9677426 | MS.gene28159:intron | 40.0% |
| !! | TTTTCCTTGTCTGCCATTTC+AGG | - | chr4.4:9680033-9680052 | MS.gene28159:intron | 40.0% |
| AAAGGATGCTGTTGAGGCAA+TGG | - | chr4.4:9679642-9679661 | MS.gene28159:intron | 45.0% | |
| ACAGAGTGATTAGGAGGGAA+GGG | + | chr4.4:9678056-9678075 | None:intergenic | 45.0% | |
| ACATGGACAATCGGTCTTTG+TGG | - | chr4.4:9677951-9677970 | MS.gene28159:intron | 45.0% | |
| ACTTTGCTAAAGGGTCCGAA+GGG | - | chr4.4:9677006-9677025 | MS.gene28159:intron | 45.0% | |
| ATGCAGACATCTCTTGCAAC+AGG | - | chr4.4:9678776-9678795 | MS.gene28159:intron | 45.0% | |
| CAGTACCATGCGCTTAACAA+AGG | + | chr4.4:9679820-9679839 | None:intergenic | 45.0% | |
| CCAATTTGGATTTGGATGCG+AGG | + | chr4.4:9676456-9676475 | None:intergenic | 45.0% | |
| CCATTTCAGGGAGGAATTCA+AGG | - | chr4.4:9680046-9680065 | MS.gene28159:intron | 45.0% | |
| CCTAAAATAAGGGTGGTGTG+AGG | + | chr4.4:9679689-9679708 | None:intergenic | 45.0% | |
| CCTCGCATCCAAATCCAAAT+TGG | - | chr4.4:9676453-9676472 | MS.gene28159:CDS | 45.0% | |
| CCTTGAATTCCTCCCTGAAA+TGG | + | chr4.4:9680049-9680068 | None:intergenic | 45.0% | |
| CTCTTGGTATAGCTGTATGG+TGG | - | chr4.4:9676942-9676961 | MS.gene28159:CDS | 45.0% | |
| CTTTGTTAAGCGCATGGTAC+TGG | - | chr4.4:9679818-9679837 | MS.gene28159:intron | 45.0% | |
| GCATATTGAGAAACAGCAGC+TGG | + | chr4.4:9677405-9677424 | None:intergenic | 45.0% | |
| GGGACAGATACAGAGTGATT+AGG | + | chr4.4:9678065-9678084 | None:intergenic | 45.0% | |
| GTGGTCAAATGCTTCTGCAA+CGG | - | chr4.4:9676961-9676980 | MS.gene28159:CDS | 45.0% | |
| TAAAATAGCCAAAGCGCAGC+TGG | - | chr4.4:9679609-9679628 | MS.gene28159:intron | 45.0% | |
| TACAGAGTGATTAGGAGGGA+AGG | + | chr4.4:9678057-9678076 | None:intergenic | 45.0% | |
| TACAGATGATCTTGGAGCAG+AGG | - | chr4.4:9678864-9678883 | MS.gene28159:CDS | 45.0% | |
| TACATTCATAACCCCAACGC+CGG | - | chr4.4:9678326-9678345 | MS.gene28159:intron | 45.0% | |
| TGAGACAGTGATAGGCATGT+TGG | - | chr4.4:9677123-9677142 | MS.gene28159:intron | 45.0% | |
| TGGTCAAATGCTTCTGCAAC+GGG | - | chr4.4:9676962-9676981 | MS.gene28159:CDS | 45.0% | |
| TGGTCCTCAAGTTCTGTTGT+TGG | + | chr4.4:9678395-9678414 | None:intergenic | 45.0% | |
| ! | CAAGGTGCTTTCTCTTAAGG+TGG | - | chr4.4:9677922-9677941 | MS.gene28159:intron | 45.0% |
| ! | CTTGCAACAGGTGTTACATC+AGG | - | chr4.4:9678788-9678807 | MS.gene28159:intron | 45.0% |
| ! | GGGAGAAAACTATGGTGTTG+TGG | + | chr4.4:9678035-9678054 | None:intergenic | 45.0% |
| ! | GTCTAAGATGGCACCATCAA+AGG | + | chr4.4:9679540-9679559 | None:intergenic | 45.0% |
| ! | TTTGTGGCTGCTGCTTGTTT+GGG | - | chr4.4:9679296-9679315 | MS.gene28159:intron | 45.0% |
| !! | TGATGGTGCCATCTTAGACT+TGG | - | chr4.4:9679541-9679560 | MS.gene28159:CDS | 45.0% |
| !! | TTTTGTGGCTGCTGCTTGTT+TGG | - | chr4.4:9679295-9679314 | MS.gene28159:intron | 45.0% |
| !!! | CACACCACCCTTATTTTAGG+AGG | - | chr4.4:9679689-9679708 | MS.gene28159:intron | 45.0% |
| !!! | CCTCACACCACCCTTATTTT+AGG | - | chr4.4:9679686-9679705 | MS.gene28159:intron | 45.0% |
| !!! | CTGATTGTTTTGACTTGGGC+AGG | + | chr4.4:9678215-9678234 | None:intergenic | 45.0% |
| AACACTGGAGATACTCCAGG+TGG | + | chr4.4:9678354-9678373 | None:intergenic | 50.0% | |
| AGCAGGAGAATCAGGGAGAA+CGG | + | chr4.4:9679765-9679784 | None:intergenic | 50.0% | |
| ATTGACCACTCCACGCATAG+AGG | + | chr4.4:9679337-9679356 | None:intergenic | 50.0% | |
| CACTTTGCTAAAGGGTCCGA+AGG | - | chr4.4:9677005-9677024 | MS.gene28159:intron | 50.0% | |
| CAGAGTGATTAGGAGGGAAG+GGG | + | chr4.4:9678055-9678074 | None:intergenic | 50.0% | |
| CCTTTAGCAAAGTGGCGAAC+CGG | + | chr4.4:9676999-9677018 | None:intergenic | 50.0% | |
| CGGTGAGTTCCCCTTTACTT+TGG | - | chr4.4:9677055-9677074 | MS.gene28159:intron | 50.0% | |
| CTTCGGACCCTTTAGCAAAG+TGG | + | chr4.4:9677007-9677026 | None:intergenic | 50.0% | |
| GAACTCACCGTCTCCCTTAA+GGG | + | chr4.4:9677045-9677064 | None:intergenic | 50.0% | |
| GAAGATCACCATAGCTCCAG+AGG | - | chr4.4:9677377-9677396 | MS.gene28159:intron | 50.0% | |
| GACGCCAACAACAGAACTTG+AGG | - | chr4.4:9678388-9678407 | MS.gene28159:intron | 50.0% | |
| GAGGGAAGGGGAGAAAACTA+TGG | + | chr4.4:9678043-9678062 | None:intergenic | 50.0% | |
| GCAGCTGGAGGAGTTGAAAA+AGG | - | chr4.4:9679624-9679643 | MS.gene28159:intron | 50.0% | |
| GGAATTCAAGGATGAGCCTG+CGG | - | chr4.4:9680058-9680077 | MS.gene28159:intron | 50.0% | |
| GGCGGTTGACGTCAAAACTT+TGG | - | chr4.4:9680079-9680098 | MS.gene28159:intron | 50.0% | |
| GGGGAAGGATTTAGCATGGA+AGG | - | chr4.4:9678447-9678466 | MS.gene28159:intron | 50.0% | |
| GTCAGTGGCTCAAGATGTCA+AGG | - | chr4.4:9677612-9677631 | MS.gene28159:CDS | 50.0% | |
| TCCAGCTGCTCTTCGTACTT+TGG | + | chr4.4:9679586-9679605 | None:intergenic | 50.0% | |
| TCCCTTAAGGGCAGGAAGTT+CGG | + | chr4.4:9677033-9677052 | None:intergenic | 50.0% | |
| TCCGAACTTCCTGCCCTTAA+GGG | - | chr4.4:9677029-9677048 | MS.gene28159:intron | 50.0% | |
| TCTATCCTCTATGCGTGGAG+TGG | - | chr4.4:9679329-9679348 | MS.gene28159:intron | 50.0% | |
| ! | CAGTGCCGGAGATTTAACAC+TGG | + | chr4.4:9678369-9678388 | None:intergenic | 50.0% |
| ! | CGGTTCGCCACTTTGCTAAA+GGG | - | chr4.4:9676997-9677016 | MS.gene28159:intron | 50.0% |
| ! | TGACTTGGGCAGGAGAAAGT+GGG | + | chr4.4:9678205-9678224 | None:intergenic | 50.0% |
| !! | CAGGGCAAACTTGTTGTCAG+TGG | - | chr4.4:9677597-9677616 | MS.gene28159:CDS | 50.0% |
| !! | TTGACTTGGGCAGGAGAAAG+TGG | + | chr4.4:9678206-9678225 | None:intergenic | 50.0% |
| AATAGCCAAAGCGCAGCTGG+AGG | - | chr4.4:9679612-9679631 | MS.gene28159:intron | 55.0% | |
| ATTCAAGGATGAGCCTGCGG+CGG | - | chr4.4:9680061-9680080 | MS.gene28159:intron | 55.0% | |
| CCTCCCTGAAATGGCAGACA+AGG | + | chr4.4:9680040-9680059 | None:intergenic | 55.0% | |
| CTTCCTGCCCTTAAGGGAGA+CGG | - | chr4.4:9677035-9677054 | MS.gene28159:intron | 55.0% | |
| GAAACAGCAGCTGGATCCTC+TGG | + | chr4.4:9677396-9677415 | None:intergenic | 55.0% | |
| GCCAAAGTACGAAGAGCAGC+TGG | - | chr4.4:9679582-9679601 | MS.gene28159:CDS | 55.0% | |
| GGAACTCACCGTCTCCCTTA+AGG | + | chr4.4:9677046-9677065 | None:intergenic | 55.0% | |
| GGAGATACTCCAGGTGGAAC+CGG | + | chr4.4:9678348-9678367 | None:intergenic | 55.0% | |
| GTCCGAACTTCCTGCCCTTA+AGG | - | chr4.4:9677028-9677047 | MS.gene28159:intron | 55.0% | |
| TCTGTTGTTGGCGTCAGTGC+CGG | + | chr4.4:9678383-9678402 | None:intergenic | 55.0% | |
| ! | CCGGTTCGCCACTTTGCTAA+AGG | - | chr4.4:9676996-9677015 | MS.gene28159:intron | 55.0% |
| ! | CCTTGTCTGCCATTTCAGGG+AGG | - | chr4.4:9680037-9680056 | MS.gene28159:intron | 55.0% |
| ! | TGTGGGGGTGGTTCTATCGT+GGG | + | chr4.4:9678085-9678104 | None:intergenic | 55.0% |
| !! | AGCTGGATCCTCTGGAGCTA+TGG | + | chr4.4:9677388-9677407 | None:intergenic | 55.0% |
| !! | GCAACGGGAGTTTGCTGTTC+CGG | - | chr4.4:9676977-9676996 | MS.gene28159:CDS | 55.0% |
| !! | TTTTGACGAAGGTGTGGGGG+TGG | + | chr4.4:9678097-9678116 | None:intergenic | 55.0% |
| CAACTCCTCCAGCTGCGCTT+TGG | + | chr4.4:9679620-9679639 | None:intergenic | 60.0% | |
| GGCAGGAAGTTCGGACCCTT+CGG | + | chr4.4:9677024-9677043 | None:intergenic | 60.0% | |
| GGGCAGGAGAAAGTGGGTGT+GGG | + | chr4.4:9678199-9678218 | None:intergenic | 60.0% | |
| TCACCGTCTCCCTTAAGGGC+AGG | + | chr4.4:9677041-9677060 | None:intergenic | 60.0% | |
| TGGGCAGGAGAAAGTGGGTG+TGG | + | chr4.4:9678200-9678219 | None:intergenic | 60.0% | |
| ! | GTGTGGGGGTGGTTCTATCG+TGG | + | chr4.4:9678086-9678105 | None:intergenic | 60.0% |
| !! | GTTTTGACGTCAACCGCCGC+AGG | + | chr4.4:9680077-9680096 | None:intergenic | 60.0% |
| ACTCCAGGTGGAACCGGCGT+TGG | + | chr4.4:9678342-9678361 | None:intergenic | 65.0% | |
| CTCCAGGTGGAACCGGCGTT+GGG | + | chr4.4:9678341-9678360 | None:intergenic | 65.0% | |
| TCCAGGTGGAACCGGCGTTG+GGG | + | chr4.4:9678340-9678359 | None:intergenic | 65.0% | |
| !! | ACCCCAACGCCGGTTCCACC+TGG | - | chr4.4:9678336-9678355 | MS.gene28159:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 9676436 | 9680121 | 9676436 | ID=MS.gene28159 |
| chr4.4 | mRNA | 9676436 | 9680121 | 9676436 | ID=MS.gene28159.t1;Parent=MS.gene28159 |
| chr4.4 | exon | 9680083 | 9680121 | 9680083 | ID=MS.gene28159.t1.exon1;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9680083 | 9680121 | 9680083 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9679501 | 9679603 | 9679501 | ID=MS.gene28159.t1.exon2;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9679501 | 9679603 | 9679501 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9679106 | 9679250 | 9679106 | ID=MS.gene28159.t1.exon3;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9679106 | 9679250 | 9679106 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9678847 | 9678957 | 9678847 | ID=MS.gene28159.t1.exon4;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9678847 | 9678957 | 9678847 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9677556 | 9677702 | 9677556 | ID=MS.gene28159.t1.exon5;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9677556 | 9677702 | 9677556 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9676877 | 9676999 | 9676877 | ID=MS.gene28159.t1.exon6;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9676877 | 9676999 | 9676877 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| chr4.4 | exon | 9676436 | 9676502 | 9676436 | ID=MS.gene28159.t1.exon7;Parent=MS.gene28159.t1 |
| chr4.4 | CDS | 9676436 | 9676502 | 9676436 | ID=cds.MS.gene28159.t1;Parent=MS.gene28159.t1 |
| Gene Sequence |
| Protein sequence |
