Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052202.t1 | ACJ86149.1 | 95.7 | 208 | 9 | 0 | 1 | 208 | 1 | 208 | 2.50E-87 | 331.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052202.t1 | P10140 | 49.0 | 51 | 26 | 0 | 39 | 89 | 33 | 83 | 1.4e-06 | 54.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052202.t1 | B7FN16 | 95.7 | 208 | 9 | 0 | 1 | 208 | 1 | 208 | 1.8e-87 | 331.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051063 | MS.gene052202 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene052202 | 0.813047 | 3.12E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene056432 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene05809 | 0.803421 | 3.51E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene058906 | 0.821776 | 3.37E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene06001 | 0.83418 | 3.48E-56 | -1.69E-46 |
| MS.gene052202 | MS.gene061145 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene06172 | 0.805079 | 1.59E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene064071 | 0.810989 | 8.76E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene064072 | 0.810774 | 9.75E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene067746 | 0.811341 | 7.35E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene068553 | 0.800429 | 1.45E-48 | -1.69E-46 |
| MS.gene052202 | MS.gene06989 | 0.822357 | 2.47E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene070222 | 0.820527 | 6.54E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene07217 | 0.830227 | 3.31E-55 | -1.69E-46 |
| MS.gene052202 | MS.gene07222 | 0.814587 | 1.43E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene072386 | 0.81618 | 6.31E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene073827 | 0.82159 | 3.72E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene09032 | 0.834678 | 2.61E-56 | -1.69E-46 |
| MS.gene052202 | MS.gene20280 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene20740 | 0.810523 | 1.10E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene21089 | 0.804666 | 1.94E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene22968 | 0.818088 | 2.35E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene23059 | 0.822604 | 2.17E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene26567 | 0.805882 | 1.08E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene27687 | 0.817197 | 3.74E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene27991 | 0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene28159 | 0.818163 | 2.26E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene28323 | 0.802134 | 6.48E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene30904 | 0.802266 | 6.09E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene33384 | 0.80219 | 6.31E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene39317 | 0.810462 | 1.14E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene41132 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene45073 | 0.80656 | 7.75E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene47955 | 0.813669 | 2.28E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene51658 | 0.801607 | 8.31E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene55732 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene052202 | MS.gene58854 | 0.808227 | 3.44E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene65412 | 0.814681 | 1.36E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene66089 | 0.810292 | 1.24E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene68810 | 0.803917 | 2.77E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene70305 | 0.817261 | 3.61E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene75477 | 0.858657 | 7.09E-63 | -1.69E-46 |
| MS.gene052202 | MS.gene76478 | 0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene052202 | MS.gene83217 | 0.814228 | 1.71E-51 | -1.69E-46 |
| MS.gene052202 | MS.gene88229 | 0.80038 | 1.48E-48 | -1.69E-46 |
| MS.gene052202 | MS.gene89721 | 0.818626 | 1.78E-52 | -1.69E-46 |
| MS.gene052202 | MS.gene91524 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene052202 | MS.gene92572 | 0.817418 | 3.33E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052202.t1 | MTR_3g087190 | 97.596 | 208 | 5 | 0 | 1 | 208 | 1 | 208 | 1.44e-149 | 414 |
| MS.gene052202.t1 | MTR_3g079680 | 66.026 | 156 | 21 | 3 | 16 | 170 | 27 | 151 | 9.14e-59 | 182 |
| MS.gene052202.t1 | MTR_8g090225 | 56.790 | 81 | 33 | 2 | 20 | 99 | 13 | 92 | 8.58e-23 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052202.t1 | AT4G39880 | 72.727 | 132 | 34 | 1 | 1 | 132 | 1 | 130 | 1.69e-61 | 190 |
Find 68 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATCTGTTTGCGAGTTC+TGG | 0.270288 | 3.2:-74442663 | MS.gene052202:CDS |
| CGTGGGTTTAAGCCGCAAAA+TGG | 0.274219 | 3.2:-74442717 | MS.gene052202:CDS |
| TGCGAGTTCTGGTTCGAATC+AGG | 0.295567 | 3.2:-74442652 | MS.gene052202:CDS |
| TGCAAAACCTGATTACAAAA+AGG | 0.295568 | 3.2:-74442901 | MS.gene052202:CDS |
| AGCCGCAAAATGGGTATTAC+AGG | 0.309367 | 3.2:-74442707 | MS.gene052202:CDS |
| AACACGCTTGATTTCAATCT+TGG | 0.311058 | 3.2:+74443010 | None:intergenic |
| CAGGGACGGTTTGACCGTTC+TGG | 0.311213 | 3.2:-74442633 | MS.gene052202:CDS |
| GATTGAAATCAAGCGTGTTC+TGG | 0.327858 | 3.2:-74443006 | MS.gene052202:CDS |
| TAAGAAGAGTTTGAATAAAC+AGG | 0.389935 | 3.2:-74442808 | MS.gene052202:CDS |
| AGGGGAGGGTTTGATCGTTC+TGG | 0.399564 | 3.2:-74442687 | MS.gene052202:CDS |
| TTGAACGCCCTGGTTCGAAC+CGG | 0.408564 | 3.2:-74442593 | MS.gene052202:CDS |
| TTGACCGTTCTGGTTCGAAC+CGG | 0.419451 | 3.2:-74442623 | MS.gene052202:CDS |
| ATTTCAATCTTGGAAGCTGA+TGG | 0.434077 | 3.2:+74443020 | None:intergenic |
| CCATCAGCCCGGTTCGAACC+AGG | 0.437888 | 3.2:+74442585 | None:intergenic |
| AAGCGCCGGGGAAGAGTCAC+TGG | 0.439330 | 3.2:-74442761 | MS.gene052202:CDS |
| GCGAGTTCTGGTTCGAATCA+GGG | 0.449121 | 3.2:-74442651 | MS.gene052202:CDS |
| TGTATGTCGGTGAAGGTTGT+AGG | 0.452936 | 3.2:+74443065 | None:intergenic |
| GTAGGCAGGAGAAGCTTGAT+TGG | 0.456166 | 3.2:+74443083 | None:intergenic |
| ACCAGTCCTCATGTTACTCC+AGG | 0.456222 | 3.2:+74442545 | None:intergenic |
| GTTCTGCTGCAAAGTTTCCC+TGG | 0.467776 | 3.2:-74442563 | MS.gene052202:CDS |
| TGACCGTTCTGGTTCGAACC+GGG | 0.469581 | 3.2:-74442622 | MS.gene052202:CDS |
| TCCTCTTCAATCTCTCGAAT+CGG | 0.471084 | 3.2:+74442831 | None:intergenic |
| AGTATTGTTGAGGAAGCGCC+GGG | 0.487009 | 3.2:-74442774 | MS.gene052202:CDS |
| CCTGGTTCGAACCGGGCTGA+TGG | 0.493822 | 3.2:-74442585 | MS.gene052202:CDS |
| TGAACGCCCTGGTTCGAACC+GGG | 0.496297 | 3.2:-74442592 | MS.gene052202:CDS |
| GCAGGAGAAGCTTGATTGGT+AGG | 0.500966 | 3.2:+74443087 | None:intergenic |
| GATTCGGGTTAATCAAAAGC+GGG | 0.502463 | 3.2:+74442859 | None:intergenic |
| GTGGGTTTAAGCCGCAAAAT+GGG | 0.507177 | 3.2:-74442716 | MS.gene052202:CDS |
| CTACGGATTCGATGTCGAAA+AGG | 0.508089 | 3.2:-74442976 | MS.gene052202:CDS |
| AATCTTGGAAGCTGATGGAA+TGG | 0.521693 | 3.2:+74443025 | None:intergenic |
| CGGGGAAGGTTTGAACGCCC+TGG | 0.529081 | 3.2:-74442603 | MS.gene052202:CDS |
| CTGGTAGGAGTAATGCTACT+AGG | 0.531882 | 3.2:-74442527 | MS.gene052202:CDS |
| GAGTTTGAATAAACAGGCTA+TGG | 0.532603 | 3.2:-74442802 | MS.gene052202:CDS |
| TTCGACATCGAATCCGTAGA+GGG | 0.537808 | 3.2:+74442980 | None:intergenic |
| CAGGGCGTTCAAACCTTCCC+CGG | 0.539251 | 3.2:+74442604 | None:intergenic |
| CCCTGGAGTAACATGAGGAC+TGG | 0.545437 | 3.2:-74442546 | MS.gene052202:CDS |
| TAGTATTGTTGAGGAAGCGC+CGG | 0.547147 | 3.2:-74442775 | MS.gene052202:CDS |
| CGTGTTCTGGAATCCCTCTA+CGG | 0.549464 | 3.2:-74442993 | MS.gene052202:CDS |
| GTTCTGGTTCGAACCGGGGA+AGG | 0.563380 | 3.2:-74442617 | MS.gene052202:CDS |
| GATTTCATGTATGTCGGTGA+AGG | 0.563490 | 3.2:+74443058 | None:intergenic |
| TGTCGGTGAAGGTTGTAGGC+AGG | 0.564653 | 3.2:+74443069 | None:intergenic |
| GGAGTAACATGAGGACTGGT+AGG | 0.575261 | 3.2:-74442542 | MS.gene052202:CDS |
| CATCAGCCCGGTTCGAACCA+GGG | 0.586597 | 3.2:+74442586 | None:intergenic |
| AAAATGGGTATTACAGGGGA+GGG | 0.587136 | 3.2:-74442701 | MS.gene052202:CDS |
| GAGAGCGATTTCATGTATGT+CGG | 0.587586 | 3.2:+74443052 | None:intergenic |
| GCCGCAAAATGGGTATTACA+GGG | 0.593489 | 3.2:-74442706 | MS.gene052202:CDS |
| TCAAGCCAGTGACTCTTCCC+CGG | 0.597800 | 3.2:+74442756 | None:intergenic |
| GACCGTTCTGGTTCGAACCG+GGG | 0.600430 | 3.2:-74442621 | MS.gene052202:CDS |
| TCCGATTCGAGAGATTGAAG+AGG | 0.601664 | 3.2:-74442832 | MS.gene052202:CDS |
| CAAAATGGGTATTACAGGGG+AGG | 0.606255 | 3.2:-74442702 | MS.gene052202:CDS |
| TTTGAATAAACAGGCTATGG+CGG | 0.615531 | 3.2:-74442799 | MS.gene052202:CDS |
| GTTCTGGTTCGAATCAGGGA+CGG | 0.619690 | 3.2:-74442647 | MS.gene052202:CDS |
| TTGCAGCAGAACCATCAGCC+CGG | 0.622044 | 3.2:+74442574 | None:intergenic |
| GTTCGAACATTGAACATGGA+CGG | 0.633586 | 3.2:-74442954 | MS.gene052202:CDS |
| TTTCGACATCGAATCCGTAG+AGG | 0.637992 | 3.2:+74442979 | None:intergenic |
| CCAGTCCTCATGTTACTCCA+GGG | 0.639983 | 3.2:+74442546 | None:intergenic |
| GATGAGAATAAGAACACCCG+TGG | 0.645135 | 3.2:-74442735 | MS.gene052202:CDS |
| AAAGGTTCGAACATTGAACA+TGG | 0.645998 | 3.2:-74442958 | MS.gene052202:CDS |
| TATGGCGGCTAGTATTGTTG+AGG | 0.660904 | 3.2:-74442784 | MS.gene052202:CDS |
| AGTTTCCCTGGAGTAACATG+AGG | 0.671157 | 3.2:-74442551 | MS.gene052202:CDS |
| ATTCGGGTTAATCAAAAGCG+GGG | 0.673297 | 3.2:+74442860 | None:intergenic |
| TTCCCCGGTTCGAACCAGAA+CGG | 0.681205 | 3.2:+74442619 | None:intergenic |
| AGATTCGGGTTAATCAAAAG+CGG | 0.681647 | 3.2:+74442858 | None:intergenic |
| ATGAGAATAAGAACACCCGT+GGG | 0.707036 | 3.2:-74442734 | MS.gene052202:CDS |
| CCGCAAAATGGGTATTACAG+GGG | 0.729401 | 3.2:-74442705 | MS.gene052202:CDS |
| GACGGAAAGAAGAAGAAACG+TGG | 0.737712 | 3.2:-74442936 | MS.gene052202:CDS |
| GGAAAGAAGAAGAAACGTGG+CGG | 0.756525 | 3.2:-74442933 | MS.gene052202:CDS |
| GTATTGTTGAGGAAGCGCCG+GGG | 0.806884 | 3.2:-74442773 | MS.gene052202:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAGAAGAGTTTGAATAAAC+AGG | - | chr3.2:74442844-74442863 | MS.gene052202:CDS | 25.0% |
| TGCAAAACCTGATTACAAAA+AGG | - | chr3.2:74442751-74442770 | MS.gene052202:CDS | 30.0% | |
| ! | ACAAAAGCCTTTTTGTAATC+AGG | + | chr3.2:74442761-74442780 | None:intergenic | 30.0% |
| AAAGGTTCGAACATTGAACA+TGG | - | chr3.2:74442694-74442713 | MS.gene052202:CDS | 35.0% | |
| AACACGCTTGATTTCAATCT+TGG | + | chr3.2:74442645-74442664 | None:intergenic | 35.0% | |
| ATTTCAATCTTGGAAGCTGA+TGG | + | chr3.2:74442635-74442654 | None:intergenic | 35.0% | |
| GAGTTTGAATAAACAGGCTA+TGG | - | chr3.2:74442850-74442869 | MS.gene052202:CDS | 35.0% | |
| TCTCGAATCGGAAAAAGATT+CGG | + | chr3.2:74442812-74442831 | None:intergenic | 35.0% | |
| TTTGAATAAACAGGCTATGG+CGG | - | chr3.2:74442853-74442872 | MS.gene052202:CDS | 35.0% | |
| ! | AGATTCGGGTTAATCAAAAG+CGG | + | chr3.2:74442797-74442816 | None:intergenic | 35.0% |
| AAAATGGGTATTACAGGGGA+GGG | - | chr3.2:74442951-74442970 | MS.gene052202:CDS | 40.0% | |
| AATCTTGGAAGCTGATGGAA+TGG | + | chr3.2:74442630-74442649 | None:intergenic | 40.0% | |
| ATGAGAATAAGAACACCCGT+GGG | - | chr3.2:74442918-74442937 | MS.gene052202:CDS | 40.0% | |
| CTCGAATCGGAAAAAGATTC+GGG | + | chr3.2:74442811-74442830 | None:intergenic | 40.0% | |
| GAGAGCGATTTCATGTATGT+CGG | + | chr3.2:74442603-74442622 | None:intergenic | 40.0% | |
| GATTGAAATCAAGCGTGTTC+TGG | - | chr3.2:74442646-74442665 | MS.gene052202:CDS | 40.0% | |
| GATTTCATGTATGTCGGTGA+AGG | + | chr3.2:74442597-74442616 | None:intergenic | 40.0% | |
| GTTCGAACATTGAACATGGA+CGG | - | chr3.2:74442698-74442717 | MS.gene052202:CDS | 40.0% | |
| TCCTCTTCAATCTCTCGAAT+CGG | + | chr3.2:74442824-74442843 | None:intergenic | 40.0% | |
| ! | ATTCGGGTTAATCAAAAGCG+GGG | + | chr3.2:74442795-74442814 | None:intergenic | 40.0% |
| ! | GATTCGGGTTAATCAAAAGC+GGG | + | chr3.2:74442796-74442815 | None:intergenic | 40.0% |
| AGCCGCAAAATGGGTATTAC+AGG | - | chr3.2:74442945-74442964 | MS.gene052202:CDS | 45.0% | |
| AGTTTCCCTGGAGTAACATG+AGG | - | chr3.2:74443101-74443120 | MS.gene052202:CDS | 45.0% | |
| CAAAATGGGTATTACAGGGG+AGG | - | chr3.2:74442950-74442969 | MS.gene052202:CDS | 45.0% | |
| CCGCAAAATGGGTATTACAG+GGG | - | chr3.2:74442947-74442966 | MS.gene052202:CDS | 45.0% | |
| CTACGGATTCGATGTCGAAA+AGG | - | chr3.2:74442676-74442695 | MS.gene052202:CDS | 45.0% | |
| CTGGTAGGAGTAATGCTACT+AGG | - | chr3.2:74443125-74443144 | MS.gene052202:CDS | 45.0% | |
| GACGGAAAGAAGAAGAAACG+TGG | - | chr3.2:74442716-74442735 | MS.gene052202:CDS | 45.0% | |
| GATGAGAATAAGAACACCCG+TGG | - | chr3.2:74442917-74442936 | MS.gene052202:CDS | 45.0% | |
| GCCGCAAAATGGGTATTACA+GGG | - | chr3.2:74442946-74442965 | MS.gene052202:CDS | 45.0% | |
| GGAAAGAAGAAGAAACGTGG+CGG | - | chr3.2:74442719-74442738 | MS.gene052202:CDS | 45.0% | |
| GTGGGTTTAAGCCGCAAAAT+GGG | - | chr3.2:74442936-74442955 | MS.gene052202:CDS | 45.0% | |
| TATGGCGGCTAGTATTGTTG+AGG | - | chr3.2:74442868-74442887 | MS.gene052202:CDS | 45.0% | |
| TCGAATCTGTTTGCGAGTTC+TGG | - | chr3.2:74442989-74443008 | MS.gene052202:CDS | 45.0% | |
| TGTATGTCGGTGAAGGTTGT+AGG | + | chr3.2:74442590-74442609 | None:intergenic | 45.0% | |
| TTCGACATCGAATCCGTAGA+GGG | + | chr3.2:74442675-74442694 | None:intergenic | 45.0% | |
| TTTCGACATCGAATCCGTAG+AGG | + | chr3.2:74442676-74442695 | None:intergenic | 45.0% | |
| ! | ATTTTGCGGCTTAAACCCAC+GGG | + | chr3.2:74442936-74442955 | None:intergenic | 45.0% |
| ! | CATTTTGCGGCTTAAACCCA+CGG | + | chr3.2:74442937-74442956 | None:intergenic | 45.0% |
| ! | CCCCTGTAATACCCATTTTG+CGG | + | chr3.2:74442950-74442969 | None:intergenic | 45.0% |
| ! | TAGTATTGTTGAGGAAGCGC+CGG | - | chr3.2:74442877-74442896 | MS.gene052202:CDS | 45.0% |
| ! | TCCGATTCGAGAGATTGAAG+AGG | - | chr3.2:74442820-74442839 | MS.gene052202:CDS | 45.0% |
| ACCAGTCCTCATGTTACTCC+AGG | + | chr3.2:74443110-74443129 | None:intergenic | 50.0% | |
| CCAGTCCTCATGTTACTCCA+GGG | + | chr3.2:74443109-74443128 | None:intergenic | 50.0% | |
| CGTGGGTTTAAGCCGCAAAA+TGG | - | chr3.2:74442935-74442954 | MS.gene052202:CDS | 50.0% | |
| GCAGGAGAAGCTTGATTGGT+AGG | + | chr3.2:74442568-74442587 | None:intergenic | 50.0% | |
| GTAGGCAGGAGAAGCTTGAT+TGG | + | chr3.2:74442572-74442591 | None:intergenic | 50.0% | |
| GTTCTGCTGCAAAGTTTCCC+TGG | - | chr3.2:74443089-74443108 | MS.gene052202:CDS | 50.0% | |
| ! | GGAGTAACATGAGGACTGGT+AGG | - | chr3.2:74443110-74443129 | MS.gene052202:CDS | 50.0% |
| !! | AGTATTGTTGAGGAAGCGCC+GGG | - | chr3.2:74442878-74442897 | MS.gene052202:CDS | 50.0% |
| !! | CGTGTTCTGGAATCCCTCTA+CGG | - | chr3.2:74442659-74442678 | MS.gene052202:CDS | 50.0% |
| !! | GCGAGTTCTGGTTCGAATCA+GGG | - | chr3.2:74443001-74443020 | MS.gene052202:CDS | 50.0% |
| !! | GTTCTGGTTCGAATCAGGGA+CGG | - | chr3.2:74443005-74443024 | MS.gene052202:CDS | 50.0% |
| !! | TGCGAGTTCTGGTTCGAATC+AGG | - | chr3.2:74443000-74443019 | MS.gene052202:CDS | 50.0% |
| !! | TTGACCGTTCTGGTTCGAAC+CGG | - | chr3.2:74443029-74443048 | MS.gene052202:CDS | 50.0% |
| AGGGGAGGGTTTGATCGTTC+TGG | - | chr3.2:74442965-74442984 | MS.gene052202:CDS | 55.0% | |
| CCCTGGAGTAACATGAGGAC+TGG | - | chr3.2:74443106-74443125 | MS.gene052202:CDS | 55.0% | |
| TCAAGCCAGTGACTCTTCCC+CGG | + | chr3.2:74442899-74442918 | None:intergenic | 55.0% | |
| TGTCGGTGAAGGTTGTAGGC+AGG | + | chr3.2:74442586-74442605 | None:intergenic | 55.0% | |
| TTGCAGCAGAACCATCAGCC+CGG | + | chr3.2:74443081-74443100 | None:intergenic | 55.0% | |
| ! | TTCCCCGGTTCGAACCAGAA+CGG | + | chr3.2:74443036-74443055 | None:intergenic | 55.0% |
| ! | TTGAACGCCCTGGTTCGAAC+CGG | - | chr3.2:74443059-74443078 | MS.gene052202:CDS | 55.0% |
| !! | GTATTGTTGAGGAAGCGCCG+GGG | - | chr3.2:74442879-74442898 | MS.gene052202:CDS | 55.0% |
| !! | TGACCGTTCTGGTTCGAACC+GGG | - | chr3.2:74443030-74443049 | MS.gene052202:CDS | 55.0% |
| CAGGGACGGTTTGACCGTTC+TGG | - | chr3.2:74443019-74443038 | MS.gene052202:CDS | 60.0% | |
| ! | CAGGGCGTTCAAACCTTCCC+CGG | + | chr3.2:74443051-74443070 | None:intergenic | 60.0% |
| ! | CATCAGCCCGGTTCGAACCA+GGG | + | chr3.2:74443069-74443088 | None:intergenic | 60.0% |
| ! | TGAACGCCCTGGTTCGAACC+GGG | - | chr3.2:74443060-74443079 | MS.gene052202:CDS | 60.0% |
| !! | GACCGTTCTGGTTCGAACCG+GGG | - | chr3.2:74443031-74443050 | MS.gene052202:CDS | 60.0% |
| !! | GTTCTGGTTCGAACCGGGGA+AGG | - | chr3.2:74443035-74443054 | MS.gene052202:CDS | 60.0% |
| CGGGGAAGGTTTGAACGCCC+TGG | - | chr3.2:74443049-74443068 | MS.gene052202:CDS | 65.0% | |
| ! | CCATCAGCCCGGTTCGAACC+AGG | + | chr3.2:74443070-74443089 | None:intergenic | 65.0% |
| ! | CCTGGTTCGAACCGGGCTGA+TGG | - | chr3.2:74443067-74443086 | MS.gene052202:CDS | 65.0% |
| !! | AAGCGCCGGGGAAGAGTCAC+TGG | - | chr3.2:74442891-74442910 | MS.gene052202:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74442524 | 74443150 | 74442524 | ID=MS.gene052202 |
| chr3.2 | mRNA | 74442524 | 74443150 | 74442524 | ID=MS.gene052202.t1;Parent=MS.gene052202 |
| chr3.2 | exon | 74442524 | 74443150 | 74442524 | ID=MS.gene052202.t1.exon1;Parent=MS.gene052202.t1 |
| chr3.2 | CDS | 74442524 | 74443150 | 74442524 | ID=cds.MS.gene052202.t1;Parent=MS.gene052202.t1 |
| Gene Sequence |
| Protein sequence |
