Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34979.t1 | RHN42312.1 | 98.6 | 421 | 6 | 0 | 1 | 421 | 1 | 421 | 1.30E-202 | 715.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34979.t1 | Q9C9X7 | 49.6 | 409 | 152 | 8 | 27 | 419 | 41 | 411 | 7.0e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34979.t1 | A0A396GMJ1 | 98.6 | 421 | 6 | 0 | 1 | 421 | 1 | 421 | 9.2e-203 | 715.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene34979.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene34979 | 0.808987 | 2.36E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene34979 | 0.816392 | 5.66E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene34979 | 0.81863 | 1.77E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene34979 | 0.815706 | 8.06E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene34979 | 0.838727 | 2.42E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene34979 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene34979 | 0.811723 | 6.07E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene34979 | 0.822547 | 2.23E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene34979 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene34979 | 0.806771 | 7.00E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene34979 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene051018 | MS.gene34979 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene34979 | 0.843225 | 1.60E-58 | -1.69E-46 |
| MS.gene051265 | MS.gene34979 | 0.829496 | 4.98E-55 | -1.69E-46 |
| MS.gene051388 | MS.gene34979 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene34979 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene34979 | 0.844671 | 6.54E-59 | -1.69E-46 |
| MS.gene051719 | MS.gene34979 | 0.850248 | 1.92E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene34979 | 0.862882 | 3.70E-64 | -1.69E-46 |
| MS.gene051744 | MS.gene34979 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene34979 | 0.80074 | 1.25E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene34979 | 0.815076 | 1.11E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene34979 | 0.812466 | 4.18E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene34979 | 0.808367 | 3.21E-50 | -1.69E-46 |
| MS.gene052561 | MS.gene34979 | 0.800019 | 1.75E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene34979 | 0.81569 | 8.13E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene34979 | 0.803651 | 3.15E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene34979 | 0.842947 | 1.89E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene34979 | 0.815964 | 7.06E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene34979 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene34979 | 0.833552 | 4.99E-56 | -1.69E-46 |
| MS.gene053054 | MS.gene34979 | -0.81243 | 4.26E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene34979 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene34979 | 0.852867 | 3.48E-61 | -1.69E-46 |
| MS.gene053226 | MS.gene34979 | 0.834507 | 2.88E-56 | -1.69E-46 |
| MS.gene053883 | MS.gene34979 | 0.803542 | 3.32E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene34979 | 0.820243 | 7.60E-53 | -1.69E-46 |
| MS.gene054967 | MS.gene34979 | 0.822513 | 2.28E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene34979 | 0.822978 | 1.77E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene34979 | 0.852903 | 3.40E-61 | -1.69E-46 |
| MS.gene055466 | MS.gene34979 | 0.867256 | 1.56E-65 | -1.69E-46 |
| MS.gene055468 | MS.gene34979 | 0.859456 | 4.09E-63 | -1.69E-46 |
| MS.gene055537 | MS.gene34979 | 0.822162 | 2.75E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene34979 | -0.827981 | 1.16E-54 | -1.69E-46 |
| MS.gene055608 | MS.gene34979 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene34979 | 0.822817 | 1.93E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene34979 | 0.825248 | 5.20E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene34979 | -0.808193 | 3.49E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene34979 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene056542 | MS.gene34979 | 0.805713 | 1.17E-49 | -1.69E-46 |
| MS.gene056543 | MS.gene34979 | 0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene056545 | MS.gene34979 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene34979 | 0.831489 | 1.62E-55 | -1.69E-46 |
| MS.gene056642 | MS.gene34979 | 0.803171 | 3.96E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene34979 | 0.808186 | 3.50E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene34979 | 0.825632 | 4.22E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene34979 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene058168 | MS.gene34979 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene34979 | 0.836353 | 9.84E-57 | -1.69E-46 |
| MS.gene058636 | MS.gene34979 | 0.810402 | 1.17E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene34979 | 0.809218 | 2.11E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene34979 | 0.822597 | 2.18E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene34979 | 0.828225 | 1.01E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene34979 | 0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene34979 | 0.804413 | 2.19E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene34979 | 0.811573 | 6.54E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene34979 | -0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene34979 | 0.840378 | 9.01E-58 | -1.69E-46 |
| MS.gene060572 | MS.gene34979 | 0.800775 | 1.23E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene34979 | 0.827482 | 1.53E-54 | -1.69E-46 |
| MS.gene060634 | MS.gene34979 | -0.806036 | 9.99E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26532 | MS.gene34979 | PPI |
| MS.gene34979 | MS.gene39623 | PPI |
| MS.gene34979 | MS.gene02469 | PPI |
| MS.gene30433 | MS.gene34979 | PPI |
| MS.gene34979 | MS.gene23196 | PPI |
| MS.gene34979 | MS.gene043662 | PPI |
| MS.gene47479 | MS.gene34979 | PPI |
| MS.gene008767 | MS.gene34979 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34979.t1 | MTR_1g112270 | 45.669 | 254 | 133 | 4 | 30 | 280 | 47 | 298 | 8.28e-73 | 238 |
| MS.gene34979.t1 | MTR_8g017210 | 64.103 | 156 | 54 | 2 | 27 | 182 | 62 | 215 | 6.50e-72 | 235 |
| MS.gene34979.t1 | MTR_2g099990 | 63.462 | 156 | 55 | 2 | 27 | 182 | 46 | 199 | 4.21e-71 | 231 |
| MS.gene34979.t1 | MTR_2g093960 | 62.179 | 156 | 58 | 1 | 27 | 182 | 32 | 186 | 5.79e-71 | 229 |
| MS.gene34979.t1 | MTR_1g016010 | 62.025 | 158 | 59 | 1 | 27 | 184 | 41 | 197 | 9.03e-71 | 230 |
| MS.gene34979.t1 | MTR_1g112270 | 45.528 | 246 | 129 | 4 | 38 | 280 | 66 | 309 | 1.48e-69 | 230 |
| MS.gene34979.t1 | MTR_1g094115 | 60.897 | 156 | 59 | 2 | 27 | 182 | 47 | 200 | 5.42e-69 | 228 |
| MS.gene34979.t1 | MTR_4g059870 | 60.256 | 156 | 61 | 1 | 27 | 182 | 38 | 192 | 5.52e-69 | 226 |
| MS.gene34979.t1 | MTR_2g090745 | 57.407 | 162 | 67 | 2 | 35 | 196 | 15 | 174 | 1.51e-63 | 211 |
| MS.gene34979.t1 | MTR_2g099990 | 63.636 | 132 | 46 | 2 | 51 | 182 | 1 | 130 | 8.16e-59 | 197 |
| MS.gene34979.t1 | MTR_1g094115 | 53.205 | 156 | 54 | 3 | 27 | 182 | 47 | 183 | 2.11e-54 | 189 |
| MS.gene34979.t1 | MTR_2g017720 | 54.887 | 133 | 53 | 2 | 20 | 152 | 306 | 431 | 2.35e-39 | 146 |
| MS.gene34979.t1 | MTR_3g102000 | 46.565 | 131 | 58 | 5 | 27 | 150 | 6 | 131 | 1.75e-26 | 106 |
| MS.gene34979.t1 | MTR_5g030560 | 64.444 | 45 | 16 | 0 | 37 | 81 | 16 | 60 | 2.42e-16 | 73.9 |
| MS.gene34979.t1 | MTR_4g103250 | 34.884 | 86 | 56 | 0 | 311 | 396 | 58 | 143 | 1.18e-14 | 71.2 |
| MS.gene34979.t1 | MTR_1g093095 | 27.374 | 179 | 114 | 6 | 15 | 181 | 74 | 248 | 3.25e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34979.t1 | AT2G01940 | 57.482 | 421 | 151 | 9 | 17 | 421 | 34 | 442 | 1.48e-164 | 470 |
| MS.gene34979.t1 | AT2G01940 | 56.738 | 423 | 152 | 11 | 17 | 421 | 34 | 443 | 4.69e-159 | 456 |
| MS.gene34979.t1 | AT1G68130 | 57.108 | 408 | 136 | 9 | 21 | 419 | 34 | 411 | 1.53e-149 | 431 |
| MS.gene34979.t1 | AT1G25250 | 53.613 | 429 | 138 | 10 | 3 | 421 | 8 | 385 | 4.01e-145 | 418 |
| MS.gene34979.t1 | AT1G25250 | 54.061 | 394 | 121 | 9 | 37 | 421 | 20 | 362 | 1.78e-134 | 390 |
| MS.gene34979.t1 | AT2G01940 | 54.247 | 365 | 139 | 9 | 73 | 421 | 1 | 353 | 5.38e-127 | 371 |
| MS.gene34979.t1 | AT1G68130 | 52.394 | 355 | 131 | 8 | 73 | 419 | 1 | 325 | 6.79e-113 | 334 |
| MS.gene34979.t1 | AT1G25250 | 49.721 | 358 | 120 | 9 | 73 | 421 | 1 | 307 | 8.54e-106 | 315 |
| MS.gene34979.t1 | AT3G50700 | 56.757 | 185 | 74 | 3 | 2 | 182 | 5 | 187 | 6.26e-72 | 233 |
| MS.gene34979.t1 | AT5G66730 | 57.219 | 187 | 68 | 4 | 2 | 182 | 5 | 185 | 8.19e-71 | 231 |
| MS.gene34979.t1 | AT4G02670 | 49.569 | 232 | 95 | 4 | 27 | 243 | 55 | 279 | 2.35e-70 | 228 |
| MS.gene34979.t1 | AT4G02670 | 49.569 | 232 | 95 | 4 | 27 | 243 | 53 | 277 | 2.37e-70 | 228 |
| MS.gene34979.t1 | AT3G45260 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 6.96e-70 | 228 |
| MS.gene34979.t1 | AT3G45260 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 6.96e-70 | 228 |
| MS.gene34979.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene34979.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene34979.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene34979.t1 | AT5G60470 | 54.645 | 183 | 82 | 1 | 27 | 209 | 44 | 225 | 1.89e-69 | 227 |
| MS.gene34979.t1 | AT5G60470 | 54.645 | 183 | 82 | 1 | 27 | 209 | 40 | 221 | 2.43e-69 | 226 |
| MS.gene34979.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 51 | 205 | 2.69e-69 | 227 |
| MS.gene34979.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 65 | 219 | 3.67e-69 | 228 |
| MS.gene34979.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene34979.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene34979.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene34979.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene34979.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.83e-69 | 228 |
| MS.gene34979.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.83e-69 | 228 |
| MS.gene34979.t1 | AT5G03150 | 61.538 | 156 | 59 | 1 | 27 | 182 | 53 | 207 | 5.60e-69 | 227 |
| MS.gene34979.t1 | AT1G03840 | 63.462 | 156 | 55 | 2 | 27 | 182 | 41 | 194 | 2.40e-68 | 225 |
| MS.gene34979.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 3.22e-68 | 224 |
| MS.gene34979.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 3.22e-68 | 224 |
| MS.gene34979.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 67 | 220 | 4.73e-68 | 224 |
| MS.gene34979.t1 | AT2G02070 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.11e-67 | 226 |
| MS.gene34979.t1 | AT2G02070 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.11e-67 | 226 |
| MS.gene34979.t1 | AT5G44160 | 49.302 | 215 | 97 | 5 | 27 | 236 | 37 | 244 | 1.71e-66 | 219 |
| MS.gene34979.t1 | AT5G60470 | 54.651 | 172 | 77 | 1 | 38 | 209 | 46 | 216 | 5.90e-65 | 215 |
| MS.gene34979.t1 | AT3G13810 | 64.138 | 145 | 51 | 1 | 38 | 182 | 68 | 211 | 6.84e-65 | 216 |
| MS.gene34979.t1 | AT1G03840 | 62.179 | 156 | 55 | 3 | 27 | 182 | 41 | 192 | 9.45e-65 | 216 |
| MS.gene34979.t1 | AT3G13810 | 64.138 | 145 | 51 | 1 | 38 | 182 | 82 | 225 | 9.58e-65 | 216 |
| MS.gene34979.t1 | AT5G44160 | 49.268 | 205 | 92 | 5 | 37 | 236 | 8 | 205 | 3.94e-63 | 209 |
| MS.gene34979.t1 | AT2G02080 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 1.76e-56 | 192 |
| MS.gene34979.t1 | AT2G02080 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 1.76e-56 | 192 |
| MS.gene34979.t1 | AT5G22890 | 31.138 | 167 | 101 | 5 | 25 | 178 | 186 | 351 | 7.15e-17 | 82.0 |
| MS.gene34979.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 14 | 203 | 1.31e-16 | 80.1 |
| MS.gene34979.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.97e-16 | 81.6 |
| MS.gene34979.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.97e-16 | 81.6 |
| MS.gene34979.t1 | AT3G48550 | 31.034 | 174 | 87 | 6 | 226 | 393 | 11 | 157 | 1.90e-15 | 73.9 |
| MS.gene34979.t1 | AT3G57670 | 30.986 | 142 | 87 | 5 | 48 | 181 | 209 | 347 | 4.22e-12 | 67.8 |
Find 74 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCATTTGAAGATTC+TGG | 0.162069 | 4.4:-18033741 | None:intergenic |
| CAGTTTCAATCTTCAACTTC+TGG | 0.249687 | 4.4:+18035988 | MS.gene34979:CDS |
| AATGGTTTATCAGGTGGTTT+TGG | 0.294809 | 4.4:-18035505 | None:intergenic |
| TTGAGTTTGAAAATGCTAAA+AGG | 0.314430 | 4.4:+18035854 | MS.gene34979:CDS |
| AGAAGAAACATCCATTGTTA+TGG | 0.316252 | 4.4:+18036020 | MS.gene34979:CDS |
| TCTGATTCTAACAAAGTCTT+TGG | 0.339052 | 4.4:-18033676 | None:intergenic |
| CTAAAATTTGCCTCACTAGA+TGG | 0.342793 | 4.4:-18035448 | None:intergenic |
| GCACTGGTAATCCTTGTAAT+GGG | 0.366655 | 4.4:-18035480 | None:intergenic |
| GGTGCTGATAATGGTTTATC+AGG | 0.373734 | 4.4:-18035514 | None:intergenic |
| GAAGATAAGTAACACTGTTA+TGG | 0.384215 | 4.4:+18035939 | MS.gene34979:CDS |
| TGATGCAAACAACTTGGTTC+TGG | 0.390697 | 4.4:-18033838 | None:intergenic |
| GAAGAAACATCCATTGTTAT+GGG | 0.391163 | 4.4:+18036021 | MS.gene34979:CDS |
| ACACACTTGAAACTTTCAAT+AGG | 0.397442 | 4.4:+18035673 | MS.gene34979:CDS |
| ATTGTTGTTGCTTGGAACTC+TGG | 0.397896 | 4.4:-18035385 | None:intergenic |
| AACAAGGTAGGTGCTGATAA+TGG | 0.405416 | 4.4:-18035523 | None:intergenic |
| CAGGTTGCATTGTTGTTGCT+TGG | 0.413228 | 4.4:-18035393 | None:intergenic |
| GAAACTGTTGCTTACAAGCT+TGG | 0.418931 | 4.4:-18035972 | None:intergenic |
| TCTGGTCTCTTTGAAACCCT+TGG | 0.440797 | 4.4:-18033723 | None:intergenic |
| AGAGACACAACTTCAGCATC+TGG | 0.455957 | 4.4:-18033649 | None:intergenic |
| AGAGTTGAAGTTCTAAGTTA+TGG | 0.456212 | 4.4:-18035591 | None:intergenic |
| AAAGTTGGCAATGGCAGAAA+AGG | 0.462255 | 4.4:+18035777 | MS.gene34979:CDS |
| AGCACTGGTAATCCTTGTAA+TGG | 0.468962 | 4.4:-18035481 | None:intergenic |
| ACAATGGATGTTTCTTCTGA+TGG | 0.469771 | 4.4:-18036015 | None:intergenic |
| TTCCCCTTCTGTGGTGGCTG+AGG | 0.471434 | 4.4:-18036052 | None:intergenic |
| ATGTTACCTGGTGTGCCTGC+CGG | 0.489494 | 4.4:-18033544 | None:intergenic |
| AGTATATCAGCCCCATTACA+AGG | 0.490202 | 4.4:+18035469 | MS.gene34979:CDS |
| TTCTGCTTCCCCTTCTGTGG+TGG | 0.491783 | 4.4:-18036058 | None:intergenic |
| TTGTTGCTTGGAACTCTGGT+TGG | 0.493027 | 4.4:-18035381 | None:intergenic |
| AGAAGACCGGCAGGCACACC+AGG | 0.497770 | 4.4:+18033538 | MS.gene34979:CDS |
| ACATAGTAATCATAAACAAT+GGG | 0.505280 | 4.4:+18033918 | MS.gene34979:CDS |
| GTTTGTGAGATCTGTAACCA+AGG | 0.507755 | 4.4:+18033706 | MS.gene34979:CDS |
| TACTAGTGAGGAGCTAAAGT+TGG | 0.509569 | 4.4:+18035762 | MS.gene34979:CDS |
| AAACAAGCACAAGATGAACT+TGG | 0.527243 | 4.4:+18035883 | MS.gene34979:CDS |
| ACTTGAGGGTTTATAGAGGA+AGG | 0.528633 | 4.4:-18035616 | None:intergenic |
| TCATTCTGCTTCCCCTTCTG+TGG | 0.531823 | 4.4:-18036061 | None:intergenic |
| AACATAGTAATCATAAACAA+TGG | 0.531879 | 4.4:+18033917 | MS.gene34979:CDS |
| ATTAACTGTGTTATCTAACA+TGG | 0.533403 | 4.4:-18033449 | None:intergenic |
| TTTGAAAGAGTTTACTAGTG+AGG | 0.537749 | 4.4:+18035750 | MS.gene34979:CDS |
| CATGATCCATGTCATGCACT+AGG | 0.544901 | 4.4:+18033859 | MS.gene34979:CDS |
| TTCTACTTGAGGGTTTATAG+AGG | 0.552798 | 4.4:-18035620 | None:intergenic |
| TTTGTGAGATCTGTAACCAA+GGG | 0.553552 | 4.4:+18033707 | MS.gene34979:CDS |
| GCTGATAATGGTTTATCAGG+TGG | 0.558635 | 4.4:-18035511 | None:intergenic |
| GTTGAAGTTCTAAGTTATGG+TGG | 0.560774 | 4.4:-18035588 | None:intergenic |
| ATGTCCTCAGCCACCACAGA+AGG | 0.565952 | 4.4:+18036048 | MS.gene34979:CDS |
| GGATCATGATGCAAACAACT+TGG | 0.569323 | 4.4:-18033844 | None:intergenic |
| AGAGGACATTCGTGTGATTG+TGG | 0.573870 | 4.4:+18034012 | MS.gene34979:CDS |
| CATGCACTAGGTGACCTTGT+TGG | 0.575089 | 4.4:+18033871 | MS.gene34979:CDS |
| GTTATGGTGGTGATGAGAAG+TGG | 0.575098 | 4.4:-18035575 | None:intergenic |
| ACAATCACACGAATGTCCTC+TGG | 0.575624 | 4.4:-18034010 | None:intergenic |
| TGATAATGCAAAAGCAGTAG+TGG | 0.577782 | 4.4:-18033485 | None:intergenic |
| TGTCCTCAGCCACCACAGAA+GGG | 0.586753 | 4.4:+18036049 | MS.gene34979:CDS |
| GTTTGTGACAAATGCAACAA+AGG | 0.587309 | 4.4:+18033940 | MS.gene34979:CDS |
| GAAGAAGACACAAAGTGCCA+TGG | 0.587753 | 4.4:+18033761 | MS.gene34979:CDS |
| TCTGAATTAGTTAACAAGGT+AGG | 0.590831 | 4.4:-18035535 | None:intergenic |
| AGCAGTAGTGGCATCAGAAG+AGG | 0.593577 | 4.4:-18033473 | None:intergenic |
| ATAATGAGTCAGAGAAACAA+AGG | 0.608502 | 4.4:+18035698 | MS.gene34979:CDS |
| CAAACTTGCTAGTTCCAATG+TGG | 0.610019 | 4.4:-18035731 | None:intergenic |
| AAGGAATGATGTATCCACAT+TGG | 0.613625 | 4.4:+18035717 | MS.gene34979:CDS |
| GTCCTCAGCCACCACAGAAG+GGG | 0.615788 | 4.4:+18036050 | MS.gene34979:CDS |
| TGAGGAGCTAAAGTTGGCAA+TGG | 0.615902 | 4.4:+18035768 | MS.gene34979:CDS |
| CAAGACGCATGCACAGTCAG+AGG | 0.626387 | 4.4:+18035352 | MS.gene34979:CDS |
| TTAACTGTGTTATCTAACAT+GGG | 0.627719 | 4.4:-18033448 | None:intergenic |
| ATCAAAACATGTGGTACCAG+AGG | 0.630022 | 4.4:+18033994 | MS.gene34979:CDS |
| TGTATCTGAATTAGTTAACA+AGG | 0.634479 | 4.4:-18035539 | None:intergenic |
| GCAGTTCTAGAAGAACATGC+AGG | 0.638781 | 4.4:-18035412 | None:intergenic |
| CACTGGTAATCCTTGTAATG+GGG | 0.639858 | 4.4:-18035479 | None:intergenic |
| TGGTGGTGATGAGAAGTGGA+AGG | 0.646826 | 4.4:-18035571 | None:intergenic |
| AAAGCACATATCAAAACATG+TGG | 0.657146 | 4.4:+18033985 | MS.gene34979:CDS |
| AAGCACAAGTCCATCTAGTG+AGG | 0.660327 | 4.4:+18035438 | MS.gene34979:CDS |
| AATGTTTCTTGATTCCAACA+AGG | 0.660532 | 4.4:-18033885 | None:intergenic |
| AGGTCACCTAGTGCATGACA+TGG | 0.667882 | 4.4:-18033865 | None:intergenic |
| GGACATGTAACCCATAACAA+TGG | 0.669538 | 4.4:-18036031 | None:intergenic |
| TTTGCATTATCAGAAAATGG+GGG | 0.689769 | 4.4:+18033496 | MS.gene34979:CDS |
| TTGAAAAGAGAAACAACACA+AGG | 0.699162 | 4.4:+18033790 | MS.gene34979:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAGTTATTAATATATAT+AGG | + | chr4.4:18034930-18034949 | MS.gene34979:intron | 10.0% |
| !! | GTAAAATACTAATATTAATT+TGG | - | chr4.4:18034266-18034285 | None:intergenic | 10.0% |
| !!! | ATATTTAAATAGTACTATTT+TGG | + | chr4.4:18034457-18034476 | MS.gene34979:intron | 10.0% |
| !! | AAATTAATTAATCAAAGATC+TGG | - | chr4.4:18034815-18034834 | None:intergenic | 15.0% |
| !! | AATTAATTAATCAAAGATCT+GGG | - | chr4.4:18034814-18034833 | None:intergenic | 15.0% |
| !! | TAGCTAATATTATAAGTTTA+TGG | + | chr4.4:18034631-18034650 | MS.gene34979:intron | 15.0% |
| !! | TTTCATCTTAAAAAATAACA+TGG | - | chr4.4:18034862-18034881 | None:intergenic | 15.0% |
| !!! | ACTCTCAAATATAAAATTTT+AGG | - | chr4.4:18034356-18034375 | None:intergenic | 15.0% |
| !!! | CTCTCAAATATAAAATTTTA+GGG | - | chr4.4:18034355-18034374 | None:intergenic | 15.0% |
| !! | AACATAGTAATCATAAACAA+TGG | + | chr4.4:18033917-18033936 | MS.gene34979:CDS | 20.0% |
| !! | AATTAAATTCTCATCTTCTT+AGG | + | chr4.4:18034415-18034434 | MS.gene34979:intron | 20.0% |
| !! | ACATAGTAATCATAAACAAT+GGG | + | chr4.4:18033918-18033937 | MS.gene34979:CDS | 20.0% |
| !! | AGTCAATAACCATATATTAT+AGG | - | chr4.4:18035284-18035303 | None:intergenic | 20.0% |
| !! | ATGAGAATTTAATTGCAAAA+AGG | - | chr4.4:18034409-18034428 | None:intergenic | 20.0% |
| !! | TATTGATAAAAAATGCAGAT+AGG | - | chr4.4:18034669-18034688 | None:intergenic | 20.0% |
| !! | TGAGAATTTAATTGCAAAAA+GGG | - | chr4.4:18034408-18034427 | None:intergenic | 20.0% |
| !!! | ATTTTTTAACCTTGTTTTGT+GGG | + | chr4.4:18033615-18033634 | MS.gene34979:intron | 20.0% |
| !!! | GTCAAATTATATTTTCATAC+AGG | + | chr4.4:18035095-18035114 | MS.gene34979:intron | 20.0% |
| !!! | TATTTTTTAACCTTGTTTTG+TGG | + | chr4.4:18033614-18033633 | MS.gene34979:intron | 20.0% |
| !!! | TTTTATCAATAAACCAAACA+AGG | + | chr4.4:18034678-18034697 | MS.gene34979:intron | 20.0% |
| ! | ATAAGACAGAATGATCAAAT+AGG | - | chr4.4:18034757-18034776 | None:intergenic | 25.0% |
| ! | GAAACTATCTACAATAAAGA+TGG | - | chr4.4:18034115-18034134 | None:intergenic | 25.0% |
| ! | TAACAAAAGAAAAAGAAGAC+CGG | + | chr4.4:18033525-18033544 | MS.gene34979:CDS | 25.0% |
| ! | TAAGACAGAATGATCAAATA+GGG | - | chr4.4:18034756-18034775 | None:intergenic | 25.0% |
| ! | TAAGATGAAATAGCTATAAC+AGG | + | chr4.4:18034872-18034891 | MS.gene34979:intron | 25.0% |
| ! | TAATATATATAGGCCTTGAT+TGG | + | chr4.4:18034940-18034959 | MS.gene34979:intron | 25.0% |
| ! | TACAATAAAGATGGAAAACT+TGG | - | chr4.4:18034106-18034125 | None:intergenic | 25.0% |
| ! | TAGTAGCTAATTAATGATAC+TGG | - | chr4.4:18034609-18034628 | None:intergenic | 25.0% |
| ! | TGTATCTGAATTAGTTAACA+AGG | - | chr4.4:18035542-18035561 | None:intergenic | 25.0% |
| ! | TTGAGTTTGAAAATGCTAAA+AGG | + | chr4.4:18035854-18035873 | MS.gene34979:CDS | 25.0% |
| !! | CTTTTGCATTATCAGAAAAT+GGG | + | chr4.4:18033494-18033513 | MS.gene34979:CDS | 25.0% |
| !! | TTTTCTCTCTCTTTCTTTTT+CGG | + | chr4.4:18034143-18034162 | MS.gene34979:intron | 25.0% |
| !! | TTTTGCATTATCAGAAAATG+GGG | + | chr4.4:18033495-18033514 | MS.gene34979:CDS | 25.0% |
| !!! | AATTTGGTTTTTCTACTTGA+GGG | - | chr4.4:18035633-18035652 | None:intergenic | 25.0% |
| !!! | ATTCATTTTAGTACCTTGTT+TGG | - | chr4.4:18034694-18034713 | None:intergenic | 25.0% |
| !!! | TAGTTTTGATCGTTTGAATT+TGG | - | chr4.4:18035649-18035668 | None:intergenic | 25.0% |
| AAAGCACATATCAAAACATG+TGG | + | chr4.4:18033985-18034004 | MS.gene34979:CDS | 30.0% | |
| AATGTTTCTTGATTCCAACA+AGG | - | chr4.4:18033888-18033907 | None:intergenic | 30.0% | |
| ACAAACTGTTTATCCAATCA+AGG | - | chr4.4:18034956-18034975 | None:intergenic | 30.0% | |
| ACACACTTGAAACTTTCAAT+AGG | + | chr4.4:18035673-18035692 | MS.gene34979:CDS | 30.0% | |
| AGAAGAAACATCCATTGTTA+TGG | + | chr4.4:18036020-18036039 | MS.gene34979:CDS | 30.0% | |
| ATAATGAGTCAGAGAAACAA+AGG | + | chr4.4:18035698-18035717 | MS.gene34979:CDS | 30.0% | |
| CAATATGAGAAAGTGAAAGA+TGG | - | chr4.4:18034074-18034093 | None:intergenic | 30.0% | |
| CCAAACAGACCTATAATATA+TGG | + | chr4.4:18035272-18035291 | MS.gene34979:intron | 30.0% | |
| CCATATATTATAGGTCTGTT+TGG | - | chr4.4:18035275-18035294 | None:intergenic | 30.0% | |
| GAAGAAACATCCATTGTTAT+GGG | + | chr4.4:18036021-18036040 | MS.gene34979:CDS | 30.0% | |
| GAAGATAAGTAACACTGTTA+TGG | + | chr4.4:18035939-18035958 | MS.gene34979:CDS | 30.0% | |
| GTTCATCATTCATCAAATTC+AGG | + | chr4.4:18034202-18034221 | MS.gene34979:intron | 30.0% | |
| TCTGAATTAGTTAACAAGGT+AGG | - | chr4.4:18035538-18035557 | None:intergenic | 30.0% | |
| TCTGATTCTAACAAAGTCTT+TGG | - | chr4.4:18033679-18033698 | None:intergenic | 30.0% | |
| TTACATTTGCCCTTTGATTA+GGG | + | chr4.4:18035309-18035328 | MS.gene34979:intron | 30.0% | |
| TTCTATGCATTTGAAGATTC+TGG | - | chr4.4:18033744-18033763 | None:intergenic | 30.0% | |
| TTGAAAAGAGAAACAACACA+AGG | + | chr4.4:18033790-18033809 | MS.gene34979:CDS | 30.0% | |
| TTTGAAAGAGTTTACTAGTG+AGG | + | chr4.4:18035750-18035769 | MS.gene34979:CDS | 30.0% | |
| TTTGCATTATCAGAAAATGG+GGG | + | chr4.4:18033496-18033515 | MS.gene34979:CDS | 30.0% | |
| ! | AATTTTGCTGATATGTTACC+TGG | - | chr4.4:18033559-18033578 | None:intergenic | 30.0% |
| ! | CAATTGACTGTGTTTGTTAA+CGG | + | chr4.4:18034237-18034256 | MS.gene34979:intron | 30.0% |
| ! | GCTTTTGCATTATCAGAAAA+TGG | + | chr4.4:18033493-18033512 | MS.gene34979:CDS | 30.0% |
| ! | TCTCTTTTCAACAATTTCCA+TGG | - | chr4.4:18033781-18033800 | None:intergenic | 30.0% |
| ! | TTTTTACATGCTCTCTCAAA+CGG | + | chr4.4:18035205-18035224 | MS.gene34979:intron | 30.0% |
| !! | AGAGTTGAAGTTCTAAGTTA+TGG | - | chr4.4:18035594-18035613 | None:intergenic | 30.0% |
| !! | GAAGACTTAATTTGTACTAG+TGG | + | chr4.4:18034727-18034746 | MS.gene34979:intron | 30.0% |
| !!! | GAATTTGGTTTTTCTACTTG+AGG | - | chr4.4:18035634-18035653 | None:intergenic | 30.0% |
| AAACAAGCACAAGATGAACT+TGG | + | chr4.4:18035883-18035902 | MS.gene34979:CDS | 35.0% | |
| AAGGAATGATGTATCCACAT+TGG | + | chr4.4:18035717-18035736 | MS.gene34979:CDS | 35.0% | |
| ACAATGGATGTTTCTTCTGA+TGG | - | chr4.4:18036018-18036037 | None:intergenic | 35.0% | |
| CAGTTTCAATCTTCAACTTC+TGG | + | chr4.4:18035988-18036007 | MS.gene34979:CDS | 35.0% | |
| CTAAAATTTGCCTCACTAGA+TGG | - | chr4.4:18035451-18035470 | None:intergenic | 35.0% | |
| GTTACATTTGCCCTTTGATT+AGG | + | chr4.4:18035308-18035327 | MS.gene34979:intron | 35.0% | |
| GTTTGTGACAAATGCAACAA+AGG | + | chr4.4:18033940-18033959 | MS.gene34979:CDS | 35.0% | |
| TTCTACTTGAGGGTTTATAG+AGG | - | chr4.4:18035623-18035642 | None:intergenic | 35.0% | |
| TTTGTGAGATCTGTAACCAA+GGG | + | chr4.4:18033707-18033726 | MS.gene34979:CDS | 35.0% | |
| ! | AATGGTTTATCAGGTGGTTT+TGG | - | chr4.4:18035508-18035527 | None:intergenic | 35.0% |
| ! | TGATAATGCAAAAGCAGTAG+TGG | - | chr4.4:18033488-18033507 | None:intergenic | 35.0% |
| !! | GTTGAAGTTCTAAGTTATGG+TGG | - | chr4.4:18035591-18035610 | None:intergenic | 35.0% |
| !! | TTAATGATACTGGCTCTTAC+AGG | - | chr4.4:18034599-18034618 | None:intergenic | 35.0% |
| !!! | ATTTTAGGGTTTGACTTCCT+AGG | - | chr4.4:18034341-18034360 | None:intergenic | 35.0% |
| AAAAGAAAAAGAAGACCGGC+AGG | + | chr4.4:18033529-18033548 | MS.gene34979:CDS | 40.0% | |
| AAACTCTCCACCCTAATCAA+AGG | - | chr4.4:18035322-18035341 | None:intergenic | 40.0% | |
| AAAGCCTGCATAATGATGAG+GGG | - | chr4.4:18034568-18034587 | None:intergenic | 40.0% | |
| AAAGTTGGCAATGGCAGAAA+AGG | + | chr4.4:18035777-18035796 | MS.gene34979:CDS | 40.0% | |
| AACTCTCCACCCTAATCAAA+GGG | - | chr4.4:18035321-18035340 | None:intergenic | 40.0% | |
| AAGAAAGCAGAACACAAACC+TGG | - | chr4.4:18034049-18034068 | None:intergenic | 40.0% | |
| ACAGTTCTTAGGACTGTAGT+AGG | + | chr4.4:18035232-18035251 | MS.gene34979:intron | 40.0% | |
| ACTTGAGGGTTTATAGAGGA+AGG | - | chr4.4:18035619-18035638 | None:intergenic | 40.0% | |
| AGTATATCAGCCCCATTACA+AGG | + | chr4.4:18035469-18035488 | MS.gene34979:CDS | 40.0% | |
| ATCAAAACATGTGGTACCAG+AGG | + | chr4.4:18033994-18034013 | MS.gene34979:CDS | 40.0% | |
| CAAACGGTTCAACAGTTCTT+AGG | + | chr4.4:18035221-18035240 | MS.gene34979:intron | 40.0% | |
| CAAAGCCTGCATAATGATGA+GGG | - | chr4.4:18034569-18034588 | None:intergenic | 40.0% | |
| CACTGGTAATCCTTGTAATG+GGG | - | chr4.4:18035482-18035501 | None:intergenic | 40.0% | |
| CTAAACACACCCACAAAACA+AGG | - | chr4.4:18033627-18033646 | None:intergenic | 40.0% | |
| GGACATGTAACCCATAACAA+TGG | - | chr4.4:18036034-18036053 | None:intergenic | 40.0% | |
| GGATCATGATGCAAACAACT+TGG | - | chr4.4:18033847-18033866 | None:intergenic | 40.0% | |
| GTTTGTGAGATCTGTAACCA+AGG | + | chr4.4:18033706-18033725 | MS.gene34979:CDS | 40.0% | |
| TACTAGTGAGGAGCTAAAGT+TGG | + | chr4.4:18035762-18035781 | MS.gene34979:CDS | 40.0% | |
| TGATGCAAACAACTTGGTTC+TGG | - | chr4.4:18033841-18033860 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTGCTTGGAACTC+TGG | - | chr4.4:18035388-18035407 | None:intergenic | 40.0% |
| ! | GAAACTGTTGCTTACAAGCT+TGG | - | chr4.4:18035975-18035994 | None:intergenic | 40.0% |
| ! | GCACTGGTAATCCTTGTAAT+GGG | - | chr4.4:18035483-18035502 | None:intergenic | 40.0% |
| !! | AACAAGGTAGGTGCTGATAA+TGG | - | chr4.4:18035526-18035545 | None:intergenic | 40.0% |
| !! | AGCACTGGTAATCCTTGTAA+TGG | - | chr4.4:18035484-18035503 | None:intergenic | 40.0% |
| !! | CAAACTTGCTAGTTCCAATG+TGG | - | chr4.4:18035734-18035753 | None:intergenic | 40.0% |
| !! | GCTGATAATGGTTTATCAGG+TGG | - | chr4.4:18035514-18035533 | None:intergenic | 40.0% |
| !! | GGTGCTGATAATGGTTTATC+AGG | - | chr4.4:18035517-18035536 | None:intergenic | 40.0% |
| AAGCACAAGTCCATCTAGTG+AGG | + | chr4.4:18035438-18035457 | MS.gene34979:CDS | 45.0% | |
| AAGCCTGCATAATGATGAGG+GGG | - | chr4.4:18034567-18034586 | None:intergenic | 45.0% | |
| ACAATCACACGAATGTCCTC+TGG | - | chr4.4:18034013-18034032 | None:intergenic | 45.0% | |
| AGAGACACAACTTCAGCATC+TGG | - | chr4.4:18033652-18033671 | None:intergenic | 45.0% | |
| AGAGGACATTCGTGTGATTG+TGG | + | chr4.4:18034012-18034031 | MS.gene34979:CDS | 45.0% | |
| AGATCTGGGTCATGACTCAT+AGG | - | chr4.4:18034800-18034819 | None:intergenic | 45.0% | |
| CATGATCCATGTCATGCACT+AGG | + | chr4.4:18033859-18033878 | MS.gene34979:CDS | 45.0% | |
| CATTTGCCCTTTGATTAGGG+TGG | + | chr4.4:18035312-18035331 | MS.gene34979:intron | 45.0% | |
| GCAAAGCCTGCATAATGATG+AGG | - | chr4.4:18034570-18034589 | None:intergenic | 45.0% | |
| TGAGGAGCTAAAGTTGGCAA+TGG | + | chr4.4:18035768-18035787 | MS.gene34979:CDS | 45.0% | |
| ! | ATTGTGGTCGTGTGTTTTCC+AGG | + | chr4.4:18034028-18034047 | MS.gene34979:CDS | 45.0% |
| ! | CAGGTTGCATTGTTGTTGCT+TGG | - | chr4.4:18035396-18035415 | None:intergenic | 45.0% |
| ! | GAAGAAGACACAAAGTGCCA+TGG | + | chr4.4:18033761-18033780 | MS.gene34979:CDS | 45.0% |
| ! | GTTATGGTGGTGATGAGAAG+TGG | - | chr4.4:18035578-18035597 | None:intergenic | 45.0% |
| ! | TAGGGTTTGACTTCCTAGGA+AGG | - | chr4.4:18034337-18034356 | None:intergenic | 45.0% |
| ! | TTGTTGCTTGGAACTCTGGT+TGG | - | chr4.4:18035384-18035403 | None:intergenic | 45.0% |
| !! | GCAGTTCTAGAAGAACATGC+AGG | - | chr4.4:18035415-18035434 | None:intergenic | 45.0% |
| !! | TCTGGTCTCTTTGAAACCCT+TGG | - | chr4.4:18033726-18033745 | None:intergenic | 45.0% |
| AGCAGTAGTGGCATCAGAAG+AGG | - | chr4.4:18033476-18033495 | None:intergenic | 50.0% | |
| AGGTCACCTAGTGCATGACA+TGG | - | chr4.4:18033868-18033887 | None:intergenic | 50.0% | |
| ATAATGATGAGGGGGTGGGT+GGG | - | chr4.4:18034559-18034578 | None:intergenic | 50.0% | |
| CATGCACTAGGTGACCTTGT+TGG | + | chr4.4:18033871-18033890 | MS.gene34979:CDS | 50.0% | |
| CTGCATAATGATGAGGGGGT+GGG | - | chr4.4:18034563-18034582 | None:intergenic | 50.0% | |
| TCATTCTGCTTCCCCTTCTG+TGG | - | chr4.4:18036064-18036083 | None:intergenic | 50.0% | |
| TCTTCTGCAGCTACCTTCCT+AGG | + | chr4.4:18034321-18034340 | MS.gene34979:intron | 50.0% | |
| TGTGTGTGAGTGAGTGTGTG+TGG | + | chr4.4:18034180-18034199 | MS.gene34979:intron | 50.0% | |
| ! | TGGTGGTGATGAGAAGTGGA+AGG | - | chr4.4:18035574-18035593 | None:intergenic | 50.0% |
| !!! | TCAGGTGGTTTTGGAAGCAC+TGG | - | chr4.4:18035499-18035518 | None:intergenic | 50.0% |
| ATGTCCTCAGCCACCACAGA+AGG | + | chr4.4:18036048-18036067 | MS.gene34979:CDS | 55.0% | |
| ATGTTACCTGGTGTGCCTGC+CGG | - | chr4.4:18033547-18033566 | None:intergenic | 55.0% | |
| CAAGACGCATGCACAGTCAG+AGG | + | chr4.4:18035352-18035371 | MS.gene34979:CDS | 55.0% | |
| CATAATGATGAGGGGGTGGG+TGG | - | chr4.4:18034560-18034579 | None:intergenic | 55.0% | |
| CCACCCCCTCATCATTATGC+AGG | + | chr4.4:18034561-18034580 | MS.gene34979:intron | 55.0% | |
| CCTGCATAATGATGAGGGGG+TGG | - | chr4.4:18034564-18034583 | None:intergenic | 55.0% | |
| TGTCCTCAGCCACCACAGAA+GGG | + | chr4.4:18036049-18036068 | MS.gene34979:CDS | 55.0% | |
| TTCTGCTTCCCCTTCTGTGG+TGG | - | chr4.4:18036061-18036080 | None:intergenic | 55.0% | |
| GTCCTCAGCCACCACAGAAG+GGG | + | chr4.4:18036050-18036069 | MS.gene34979:CDS | 60.0% | |
| TTCCCCTTCTGTGGTGGCTG+AGG | - | chr4.4:18036055-18036074 | None:intergenic | 60.0% | |
| AGAAGACCGGCAGGCACACC+AGG | + | chr4.4:18033538-18033557 | MS.gene34979:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 18033451 | 18036083 | 18033451 | ID=MS.gene34979 |
| chr4.4 | mRNA | 18033451 | 18036083 | 18033451 | ID=MS.gene34979.t1;Parent=MS.gene34979 |
| chr4.4 | exon | 18033451 | 18033559 | 18033451 | ID=MS.gene34979.t1.exon1;Parent=MS.gene34979.t1 |
| chr4.4 | CDS | 18033451 | 18033559 | 18033451 | ID=cds.MS.gene34979.t1;Parent=MS.gene34979.t1 |
| chr4.4 | exon | 18033647 | 18034049 | 18033647 | ID=MS.gene34979.t1.exon2;Parent=MS.gene34979.t1 |
| chr4.4 | CDS | 18033647 | 18034049 | 18033647 | ID=cds.MS.gene34979.t1;Parent=MS.gene34979.t1 |
| chr4.4 | exon | 18035330 | 18036083 | 18035330 | ID=MS.gene34979.t1.exon3;Parent=MS.gene34979.t1 |
| chr4.4 | CDS | 18035330 | 18036083 | 18035330 | ID=cds.MS.gene34979.t1;Parent=MS.gene34979.t1 |
| Gene Sequence |
| Protein sequence |
