Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36081.t1 | XP_013445304.1 | 98.5 | 412 | 6 | 0 | 1 | 412 | 1 | 412 | 4.50E-229 | 803.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36081.t1 | O64517 | 65.1 | 424 | 130 | 6 | 1 | 412 | 1 | 418 | 1.6e-150 | 533.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36081.t1 | A0A072U0M2 | 98.5 | 412 | 6 | 0 | 1 | 412 | 1 | 412 | 3.3e-229 | 803.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04917 | MS.gene36081 | 0.801126 | 1.04E-48 | -1.69E-46 |
| MS.gene049807 | MS.gene36081 | 0.834836 | 2.38E-56 | -1.69E-46 |
| MS.gene049861 | MS.gene36081 | 0.810744 | 9.90E-51 | -1.69E-46 |
| MS.gene049887 | MS.gene36081 | 0.842701 | 2.20E-58 | -1.69E-46 |
| MS.gene04998 | MS.gene36081 | 0.806896 | 6.58E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene36081 | 0.807507 | 4.89E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene36081 | 0.865979 | 3.99E-65 | -1.69E-46 |
| MS.gene050384 | MS.gene36081 | 0.802249 | 6.14E-49 | -1.69E-46 |
| MS.gene050386 | MS.gene36081 | 0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene36081 | 0.841464 | 4.68E-58 | -1.69E-46 |
| MS.gene050646 | MS.gene36081 | 0.842249 | 2.90E-58 | -1.69E-46 |
| MS.gene050654 | MS.gene36081 | 0.801648 | 8.15E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene36081 | 0.826282 | 2.96E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene36081 | 0.841622 | 4.25E-58 | -1.69E-46 |
| MS.gene051003 | MS.gene36081 | 0.845045 | 5.19E-59 | -1.69E-46 |
| MS.gene051043 | MS.gene36081 | 0.817299 | 3.54E-52 | -1.69E-46 |
| MS.gene051184 | MS.gene36081 | 0.827085 | 1.90E-54 | -1.69E-46 |
| MS.gene051234 | MS.gene36081 | 0.837196 | 5.99E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene36081 | 0.811967 | 5.37E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene36081 | 0.817865 | 2.64E-52 | -1.69E-46 |
| MS.gene051642 | MS.gene36081 | 0.815207 | 1.04E-51 | -1.69E-46 |
| MS.gene051724 | MS.gene36081 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene36081 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene36081 | 0.826014 | 3.42E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene36081 | -0.805439 | 1.33E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene36081 | -0.854098 | 1.54E-61 | -1.69E-46 |
| MS.gene052296 | MS.gene36081 | 0.803288 | 3.74E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene36081 | 0.846894 | 1.63E-59 | -1.69E-46 |
| MS.gene052335 | MS.gene36081 | 0.829778 | 4.25E-55 | -1.69E-46 |
| MS.gene052342 | MS.gene36081 | 0.813293 | 2.75E-51 | -1.69E-46 |
| MS.gene052397 | MS.gene36081 | 0.805181 | 1.51E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene36081 | 0.835083 | 2.06E-56 | -1.69E-46 |
| MS.gene053058 | MS.gene36081 | 0.805582 | 1.25E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene36081 | 0.84712 | 1.41E-59 | -1.69E-46 |
| MS.gene053456 | MS.gene36081 | 0.816178 | 6.32E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene36081 | 0.821111 | 4.80E-53 | -1.69E-46 |
| MS.gene054250 | MS.gene36081 | 0.815645 | 8.32E-52 | -1.69E-46 |
| MS.gene054403 | MS.gene36081 | 0.825569 | 4.36E-54 | -1.69E-46 |
| MS.gene056097 | MS.gene36081 | 0.848534 | 5.77E-60 | -1.69E-46 |
| MS.gene056181 | MS.gene36081 | 0.820655 | 6.12E-53 | -1.69E-46 |
| MS.gene056677 | MS.gene36081 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene056752 | MS.gene36081 | 0.826138 | 3.20E-54 | -1.69E-46 |
| MS.gene056849 | MS.gene36081 | 0.816757 | 4.69E-52 | -1.69E-46 |
| MS.gene057999 | MS.gene36081 | 0.800021 | 1.75E-48 | -1.69E-46 |
| MS.gene058054 | MS.gene36081 | 0.847342 | 1.23E-59 | -1.69E-46 |
| MS.gene058055 | MS.gene36081 | 0.822671 | 2.09E-53 | -1.69E-46 |
| MS.gene058074 | MS.gene36081 | 0.801118 | 1.05E-48 | -1.69E-46 |
| MS.gene058159 | MS.gene36081 | 0.801234 | 9.91E-49 | -1.69E-46 |
| MS.gene058261 | MS.gene36081 | 0.801709 | 7.92E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene36081 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene36081 | 0.802064 | 6.70E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene36081 | 0.835653 | 1.48E-56 | -1.69E-46 |
| MS.gene059146 | MS.gene36081 | 0.802688 | 4.98E-49 | -1.69E-46 |
| MS.gene059170 | MS.gene36081 | 0.818125 | 2.31E-52 | -1.69E-46 |
| MS.gene059171 | MS.gene36081 | 0.815587 | 8.57E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene36081 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene060563 | MS.gene36081 | 0.82906 | 6.36E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene36081 | 0.804945 | 1.69E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene36081 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene36081 | 0.860261 | 2.34E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36081.t1 | MTR_8g447080 | 98.544 | 412 | 6 | 0 | 1 | 412 | 1 | 412 | 0.0 | 836 |
| MS.gene36081.t1 | MTR_2g063570 | 65.707 | 417 | 119 | 6 | 1 | 412 | 4 | 401 | 0.0 | 539 |
| MS.gene36081.t1 | MTR_7g088035 | 53.503 | 157 | 69 | 2 | 3 | 156 | 7 | 162 | 1.83e-49 | 170 |
| MS.gene36081.t1 | MTR_7g088035 | 51.807 | 83 | 40 | 0 | 329 | 411 | 231 | 313 | 3.88e-22 | 96.7 |
| MS.gene36081.t1 | MTR_0340s0030 | 31.765 | 170 | 100 | 2 | 3 | 158 | 4 | 171 | 1.50e-23 | 99.8 |
| MS.gene36081.t1 | MTR_7g451400 | 37.333 | 150 | 87 | 4 | 3 | 146 | 74 | 222 | 4.14e-23 | 100 |
| MS.gene36081.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 5.41e-20 | 91.7 |
| MS.gene36081.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 5.71e-20 | 91.7 |
| MS.gene36081.t1 | MTR_2g008990 | 36.913 | 149 | 89 | 3 | 3 | 146 | 116 | 264 | 6.13e-20 | 91.7 |
| MS.gene36081.t1 | MTR_4g094202 | 35.526 | 152 | 89 | 4 | 2 | 146 | 100 | 249 | 1.19e-18 | 87.4 |
| MS.gene36081.t1 | MTR_2g008970 | 33.775 | 151 | 92 | 3 | 3 | 146 | 88 | 237 | 1.71e-17 | 84.0 |
| MS.gene36081.t1 | MTR_4g094210 | 34.228 | 149 | 92 | 4 | 3 | 146 | 116 | 263 | 3.07e-17 | 83.2 |
| MS.gene36081.t1 | MTR_2g008970 | 33.775 | 151 | 92 | 3 | 3 | 146 | 88 | 237 | 3.78e-17 | 82.4 |
| MS.gene36081.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 1.11e-14 | 74.3 |
| MS.gene36081.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 2.04e-14 | 74.7 |
| MS.gene36081.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 2.50e-14 | 74.3 |
| MS.gene36081.t1 | MTR_2g008980 | 31.788 | 151 | 95 | 5 | 3 | 146 | 110 | 259 | 3.52e-14 | 73.6 |
| MS.gene36081.t1 | MTR_1g054545 | 34.545 | 110 | 66 | 2 | 3 | 106 | 16 | 125 | 1.94e-12 | 69.7 |
| MS.gene36081.t1 | MTR_1g058610 | 29.944 | 177 | 94 | 6 | 1 | 157 | 1 | 167 | 9.22e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36081.t1 | AT1G79340 | 66.274 | 424 | 125 | 6 | 1 | 412 | 1 | 418 | 0.0 | 554 |
| MS.gene36081.t1 | AT1G79330 | 65.394 | 419 | 129 | 5 | 1 | 412 | 1 | 410 | 0.0 | 550 |
| MS.gene36081.t1 | AT1G79310 | 56.161 | 422 | 156 | 9 | 1 | 412 | 1 | 403 | 1.16e-159 | 456 |
| MS.gene36081.t1 | AT1G79320 | 57.488 | 414 | 128 | 6 | 1 | 412 | 1 | 368 | 2.69e-158 | 451 |
| MS.gene36081.t1 | AT1G16420 | 41.628 | 430 | 183 | 9 | 1 | 412 | 1 | 380 | 1.22e-98 | 299 |
| MS.gene36081.t1 | AT5G04200 | 36.145 | 415 | 157 | 10 | 3 | 411 | 10 | 322 | 1.70e-72 | 230 |
| MS.gene36081.t1 | AT1G02170 | 37.584 | 149 | 87 | 4 | 3 | 146 | 80 | 227 | 2.81e-23 | 100 |
| MS.gene36081.t1 | AT4G25110 | 36.486 | 148 | 89 | 3 | 3 | 146 | 116 | 262 | 2.54e-22 | 98.6 |
| MS.gene36081.t1 | AT4G25110 | 36.242 | 149 | 89 | 4 | 3 | 146 | 116 | 263 | 2.04e-21 | 95.9 |
| MS.gene36081.t1 | AT5G64240 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 6.37e-18 | 85.1 |
| MS.gene36081.t1 | AT5G64240 | 33.557 | 149 | 93 | 3 | 3 | 146 | 90 | 237 | 7.19e-18 | 84.0 |
Find 119 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACTTAAGCAGAAAAC+TGG | 0.288159 | 8.3:-52924429 | MS.gene36081:CDS |
| ATAAGCATTAGCTGCATTTC+CGG | 0.302115 | 8.3:+52924056 | None:intergenic |
| TTCATAAACTTCTTCACTTT+AGG | 0.312797 | 8.3:+52924339 | None:intergenic |
| ATGAAGAAACAGATGAAGAT+AGG | 0.314708 | 8.3:-52924509 | MS.gene36081:CDS |
| CTGCTGTTTGTTCATTATAG+TGG | 0.327931 | 8.3:-52925487 | MS.gene36081:CDS |
| AGGGGATTTCATGTCCCTTC+AGG | 0.372762 | 8.3:-52924555 | MS.gene36081:CDS |
| GGAAATGCAGCTAATGCTTA+TGG | 0.373990 | 8.3:-52924054 | MS.gene36081:CDS |
| GAACATTCTGGATCCGGCTT+TGG | 0.378094 | 8.3:-52924624 | MS.gene36081:CDS |
| AGGTGGACAAGGTGGGATAC+TGG | 0.379608 | 8.3:-52924280 | MS.gene36081:CDS |
| GGATCCGGCTTTGGATTGTC+TGG | 0.394846 | 8.3:-52924615 | MS.gene36081:CDS |
| AAGGGAGAAGAGGAACATTC+TGG | 0.411416 | 8.3:-52924636 | MS.gene36081:CDS |
| TTTCTTCATCCCTGCGTGTA+TGG | 0.415812 | 8.3:+52924523 | None:intergenic |
| GTCGGAGCTGGTCAGATCTT+CGG | 0.416923 | 8.3:-52925521 | MS.gene36081:CDS |
| CCCACTTCCGTCTCCATGGC+AGG | 0.428897 | 8.3:+52924186 | None:intergenic |
| GACAAGCATCTGCTGAAGTC+TGG | 0.432339 | 8.3:+52924082 | None:intergenic |
| CACCTTCACCACCTCCATGC+TGG | 0.437332 | 8.3:+52924298 | None:intergenic |
| AGCTTTCAGCAATGCAATAC+AGG | 0.451961 | 8.3:-52924031 | MS.gene36081:CDS |
| ACTCGTCTTCCTGCTGAAAC+CGG | 0.458013 | 8.3:-52925457 | MS.gene36081:CDS |
| TGATGATTTCAAGGAATTTG+TGG | 0.462771 | 8.3:-52924757 | MS.gene36081:CDS |
| TCAGCAGATGCTTGTCCTGC+CGG | 0.466394 | 8.3:-52924075 | MS.gene36081:CDS |
| GATTGTCTGGCTTTCTGCAT+AGG | 0.472012 | 8.3:-52924602 | MS.gene36081:CDS |
| ATGAAATCCCCTGGACTCAA+TGG | 0.472573 | 8.3:+52924566 | None:intergenic |
| ACCGGAGAGGATGATGATAC+TGG | 0.478656 | 8.3:-52925439 | MS.gene36081:CDS |
| CAGATAGGAGAGAGCACAAA+GGG | 0.484810 | 8.3:-52924654 | MS.gene36081:CDS |
| GTGAACAGATGATGATTTCA+AGG | 0.489198 | 8.3:-52924766 | MS.gene36081:intron |
| GAAGAGGAACATTCTGGATC+CGG | 0.491474 | 8.3:-52924630 | MS.gene36081:CDS |
| TTGAGGATGCCATTGAGTCC+AGG | 0.491586 | 8.3:-52924575 | MS.gene36081:CDS |
| CGTCTTATGTTCTTTCCTGT+CGG | 0.492887 | 8.3:+52925550 | None:intergenic |
| GGTGGACAAGGTGGGATACT+GGG | 0.494635 | 8.3:-52924279 | MS.gene36081:CDS |
| AAAACATATCAGCACAAGAA+AGG | 0.502276 | 8.3:+52923880 | None:intergenic |
| GCCTGCCATGGAGACGGAAG+TGG | 0.502627 | 8.3:-52924187 | MS.gene36081:CDS |
| CTCATCAGAATCCCACCGCT+TGG | 0.506927 | 8.3:+52924120 | None:intergenic |
| CTGCTTAAGTATATCAATGA+GGG | 0.508162 | 8.3:+52924437 | None:intergenic |
| TGAAGAAACAGATGAAGATA+GGG | 0.509025 | 8.3:-52924508 | MS.gene36081:CDS |
| TCATCCTCTCCGGTTTCAGC+AGG | 0.511272 | 8.3:+52925448 | None:intergenic |
| TTTCAAGGAATTTGTGGATG+GGG | 0.511520 | 8.3:-52924751 | MS.gene36081:CDS |
| GAAGAAGCTAAGGAGCAGAT+AGG | 0.515777 | 8.3:-52924669 | MS.gene36081:CDS |
| GGTGGTGAAGGTGGACAAGG+TGG | 0.521742 | 8.3:-52924288 | MS.gene36081:CDS |
| GCGAGAAAAGCCGTATTGAT+CGG | 0.523585 | 8.3:-52925715 | MS.gene36081:CDS |
| TCCCACATGGAGTGAAGAAT+AGG | 0.524773 | 8.3:-52924476 | MS.gene36081:CDS |
| ACCAGTATCATCATCCTCTC+CGG | 0.525146 | 8.3:+52925438 | None:intergenic |
| AGAGAGAAGCTACAGAAAGA+TGG | 0.525591 | 8.3:-52923952 | MS.gene36081:CDS |
| CTCCAGCATGGAGGTGGTGA+AGG | 0.526322 | 8.3:-52924300 | MS.gene36081:CDS |
| ACTTCCCACTTCCGTCTCCA+TGG | 0.527397 | 8.3:+52924182 | None:intergenic |
| GGGAAAGAAAATATAGATGT+TGG | 0.529307 | 8.3:-52924408 | MS.gene36081:CDS |
| ATTTCAAGGAATTTGTGGAT+GGG | 0.534026 | 8.3:-52924752 | MS.gene36081:CDS |
| CTGGTCAGATCTTCGGAGGA+TGG | 0.535257 | 8.3:-52925514 | MS.gene36081:CDS |
| TGAAGGGACATGAAATCCCC+TGG | 0.538955 | 8.3:+52924557 | None:intergenic |
| GCATTAGCTGCATTTCCGGC+AGG | 0.539676 | 8.3:+52924060 | None:intergenic |
| GGAGGTGGTGAAGGTGGACA+AGG | 0.539731 | 8.3:-52924291 | MS.gene36081:CDS |
| AAATGCTTGATCGAACGTTA+CGG | 0.540516 | 8.3:-52925628 | MS.gene36081:CDS |
| AACAAGCTCCAGCATGGAGG+TGG | 0.540605 | 8.3:-52924306 | MS.gene36081:CDS |
| AGTAAGCATGAAGTATATGC+TGG | 0.543669 | 8.3:-52924162 | MS.gene36081:CDS |
| TGCAATACAGGCTATAATTG+AGG | 0.544373 | 8.3:-52924019 | MS.gene36081:CDS |
| GATTTCAAGGAATTTGTGGA+TGG | 0.550385 | 8.3:-52924753 | MS.gene36081:CDS |
| TCTGATATGAATCTCATCAC+TGG | 0.553185 | 8.3:-52925394 | MS.gene36081:intron |
| AAGACGTGTTCTGTCGGAGC+TGG | 0.553482 | 8.3:-52925533 | MS.gene36081:CDS |
| TTTGTTCATTATAGTGGACA+TGG | 0.555229 | 8.3:-52925481 | MS.gene36081:CDS |
| TGCAAAGCCTGCCATGGAGA+CGG | 0.557128 | 8.3:-52924193 | MS.gene36081:CDS |
| TGAGGATGCCATTGAGTCCA+GGG | 0.557608 | 8.3:-52924574 | MS.gene36081:CDS |
| AGGTGGGATACTGGGAATGG+TGG | 0.558174 | 8.3:-52924271 | MS.gene36081:CDS |
| TCGTCGTACACGGAGCCGAC+AGG | 0.559875 | 8.3:-52925565 | MS.gene36081:CDS |
| AAGCGCGGTCTTCCAAGCGG+TGG | 0.560038 | 8.3:-52924132 | MS.gene36081:CDS |
| AGAGAGCACAAAGGGAGAAG+AGG | 0.560245 | 8.3:-52924646 | MS.gene36081:CDS |
| TGATCACTGCAATAGAGTCC+TGG | 0.562515 | 8.3:+52923916 | None:intergenic |
| GTAGTTGATTCCGATCAATA+CGG | 0.563226 | 8.3:+52925705 | None:intergenic |
| CAGCATGGAGGTGGTGAAGG+TGG | 0.564016 | 8.3:-52924297 | MS.gene36081:CDS |
| GGTGGGATACTGGGAATGGT+GGG | 0.573761 | 8.3:-52924270 | MS.gene36081:CDS |
| AGCGCGGTCTTCCAAGCGGT+GGG | 0.574258 | 8.3:-52924131 | MS.gene36081:CDS |
| GATGGATTCACTCAAAAGCC+AGG | 0.574901 | 8.3:-52923934 | MS.gene36081:CDS |
| CTTTCTGCATAGGAAAGTTG+AGG | 0.574996 | 8.3:-52924592 | MS.gene36081:CDS |
| ATGGGGTTCCTAGAGGATGT+AGG | 0.576033 | 8.3:-52924734 | MS.gene36081:CDS |
| TGGCTTGATTGAAGAAGCTA+AGG | 0.577289 | 8.3:-52924679 | MS.gene36081:CDS |
| ATACTCGGAGCTTATTCTCA+AGG | 0.577748 | 8.3:-52923977 | MS.gene36081:CDS |
| GTGGTGAAGGTGGACAAGGT+GGG | 0.577935 | 8.3:-52924287 | MS.gene36081:CDS |
| AAGCTGAATGATAATGATGA+GGG | 0.577946 | 8.3:-52924219 | MS.gene36081:CDS |
| GTGATGAGATTCATATCAGA+AGG | 0.580568 | 8.3:+52925397 | None:intergenic |
| GTATGGCGACGCAATCCTGA+AGG | 0.580869 | 8.3:+52924540 | None:intergenic |
| TCTGCTTAAGTATATCAATG+AGG | 0.583793 | 8.3:+52924436 | None:intergenic |
| TGATGGTGCAATTACATACT+CGG | 0.584306 | 8.3:-52923992 | MS.gene36081:CDS |
| AAAGCCAGACAATCCAAAGC+CGG | 0.589166 | 8.3:+52924611 | None:intergenic |
| AAAGCTGAATGATAATGATG+AGG | 0.590743 | 8.3:-52924220 | MS.gene36081:CDS |
| ATGGTCAGCCTACATCCTCT+AGG | 0.591604 | 8.3:+52924726 | None:intergenic |
| ATCTTGAACAAGCTCCAGCA+TGG | 0.591703 | 8.3:-52924312 | MS.gene36081:CDS |
| GGGATATGCAAAGCCTGCCA+TGG | 0.591792 | 8.3:-52924199 | MS.gene36081:CDS |
| ATATACTTAAGCAGAAAACT+GGG | 0.608702 | 8.3:-52924428 | MS.gene36081:CDS |
| GACCTATTCTTCACTCCATG+TGG | 0.610109 | 8.3:+52924474 | None:intergenic |
| CCTGCCATGGAGACGGAAGT+GGG | 0.610405 | 8.3:-52924186 | MS.gene36081:CDS |
| GAACATAAGACGTGTTCTGT+CGG | 0.616617 | 8.3:-52925539 | MS.gene36081:CDS |
| TTGTTCATTATAGTGGACAT+GGG | 0.616864 | 8.3:-52925480 | MS.gene36081:CDS |
| GATGCGTAAACGACGTGTGG+AGG | 0.622173 | 8.3:-52925657 | MS.gene36081:CDS |
| AGCGGTGGGATTCTGATGAG+CGG | 0.625209 | 8.3:-52924117 | MS.gene36081:CDS |
| ATATCAATGAGGGTTGAAAG+TGG | 0.625536 | 8.3:+52924447 | None:intergenic |
| GATTGCGTCGCCATACACGC+AGG | 0.630892 | 8.3:-52924533 | MS.gene36081:CDS |
| TCTGATTCATGCCACAGTGG+TGG | 0.633718 | 8.3:-52924699 | MS.gene36081:CDS |
| TATGGCGACGCAATCCTGAA+GGG | 0.639983 | 8.3:+52924541 | None:intergenic |
| GCAGATAGGAGAGAGCACAA+AGG | 0.640959 | 8.3:-52924655 | MS.gene36081:CDS |
| GAGGATGCGTAAACGACGTG+TGG | 0.642474 | 8.3:-52925660 | MS.gene36081:CDS |
| ACCTATTCTTCACTCCATGT+GGG | 0.644192 | 8.3:+52924475 | None:intergenic |
| GTGGCATGAATCAGATACAA+TGG | 0.644776 | 8.3:+52924707 | None:intergenic |
| ATATAGATGTTGGTCAACTG+AGG | 0.645754 | 8.3:-52924398 | MS.gene36081:CDS |
| GCTATAATTGAGGAGACTGA+TGG | 0.648617 | 8.3:-52924009 | MS.gene36081:CDS |
| CGACACGGATTCGTCGTACA+CGG | 0.650792 | 8.3:-52925575 | MS.gene36081:CDS |
| GGAGCTGGTCAGATCTTCGG+AGG | 0.651252 | 8.3:-52925518 | MS.gene36081:CDS |
| TTTGTGGATGGGGTTCCTAG+AGG | 0.655242 | 8.3:-52924741 | MS.gene36081:CDS |
| ATTGCGTCGCCATACACGCA+GGG | 0.657799 | 8.3:-52924532 | MS.gene36081:CDS |
| ATTGATCGGAATCAACTACC+CGG | 0.662029 | 8.3:-52925701 | MS.gene36081:CDS |
| AGGGATATCGAACTCCCACA+TGG | 0.666782 | 8.3:-52924489 | MS.gene36081:CDS |
| ACAAGGTGGGATACTGGGAA+TGG | 0.670102 | 8.3:-52924274 | MS.gene36081:CDS |
| TTGATCGGAATCAACTACCC+GGG | 0.674290 | 8.3:-52925700 | MS.gene36081:CDS |
| GAGGATGCCATTGAGTCCAG+GGG | 0.680842 | 8.3:-52924573 | MS.gene36081:CDS |
| TCTTCCTGCTGAAACCGGAG+AGG | 0.694590 | 8.3:-52925452 | MS.gene36081:CDS |
| TCAAAGCGCGGTCTTCCAAG+CGG | 0.707343 | 8.3:-52924135 | MS.gene36081:CDS |
| ACAAGAAAGGATCATCAACA+TGG | 0.709272 | 8.3:+52923893 | None:intergenic |
| TTGAACAAGCTCCAGCATGG+AGG | 0.724624 | 8.3:-52924309 | MS.gene36081:CDS |
| TATGCTGGATCGTCAAAGCG+CGG | 0.728471 | 8.3:-52924147 | MS.gene36081:CDS |
| GGAACAAAAGCAGAATTACG+AGG | 0.740123 | 8.3:-52925679 | MS.gene36081:CDS |
| CTTCAATCAAGCCACCACTG+TGG | 0.744555 | 8.3:+52924688 | None:intergenic |
| GTATCTGATTCATGCCACAG+TGG | 0.772525 | 8.3:-52924702 | MS.gene36081:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTTGTAATCTTTATATA+GGG | - | chr8.3:52924748-52924767 | MS.gene36081:CDS | 15.0% |
| !! | AAAAATGAGAGTAGTTTATT+TGG | + | chr8.3:52924244-52924263 | None:intergenic | 20.0% |
| !! | CATGTTTGTAATCTTTATAT+AGG | - | chr8.3:52924747-52924766 | MS.gene36081:CDS | 20.0% |
| !! | TTTAAAAAGTTTCTTGTAGT+TGG | + | chr8.3:52924487-52924506 | None:intergenic | 20.0% |
| !! | TTTAGTATACATGAATTGAA+AGG | - | chr8.3:52924666-52924685 | MS.gene36081:CDS | 20.0% |
| !!! | CATGTTTTATTTTGTGTTTT+TGG | - | chr8.3:52924319-52924338 | MS.gene36081:CDS | 20.0% |
| !!! | TACTTTAATTTGATCTTTCT+TGG | - | chr8.3:52924513-52924532 | MS.gene36081:CDS | 20.0% |
| !!! | TCTGTTTTTGTTTTGATTAA+GGG | - | chr8.3:52924279-52924298 | MS.gene36081:CDS | 20.0% |
| !!! | TTTGTGTTTTTGGATTTTTT+TGG | - | chr8.3:52924329-52924348 | MS.gene36081:CDS | 20.0% |
| ! | ATATACTTAAGCAGAAAACT+GGG | - | chr8.3:52925178-52925197 | MS.gene36081:intron | 25.0% |
| ! | TTCATAAACTTCTTCACTTT+AGG | + | chr8.3:52925270-52925289 | None:intergenic | 25.0% |
| !!! | CTACACTTTTTGATGTTTTT+GGG | - | chr8.3:52925232-52925251 | MS.gene36081:intron | 25.0% |
| !!! | CTCTGTTTTTGTTTTGATTA+AGG | - | chr8.3:52924278-52924297 | MS.gene36081:CDS | 25.0% |
| !!! | CTTGATTTGATTTGTTGATA+AGG | - | chr8.3:52924442-52924461 | MS.gene36081:CDS | 25.0% |
| !!! | TACACTTTTTGATGTTTTTG+GGG | - | chr8.3:52925233-52925252 | MS.gene36081:intron | 25.0% |
| ATGAAGAAACAGATGAAGAT+AGG | - | chr8.3:52925097-52925116 | MS.gene36081:intron | 30.0% | |
| ATGAATTGAAAGGAACAGAA+GGG | - | chr8.3:52924676-52924695 | MS.gene36081:CDS | 30.0% | |
| ATGGAGAAAATTCATAGATC+AGG | - | chr8.3:52924558-52924577 | MS.gene36081:CDS | 30.0% | |
| ATGTCATTAGTGAGTAGTAA+TGG | - | chr8.3:52924779-52924798 | MS.gene36081:intron | 30.0% | |
| ATTTCAAGGAATTTGTGGAT+GGG | - | chr8.3:52924854-52924873 | MS.gene36081:intron | 30.0% | |
| ATTTCGTGTAGAGATAGAAA+TGG | - | chr8.3:52924539-52924558 | MS.gene36081:CDS | 30.0% | |
| CTCGATTAAAATTCGAACAT+TGG | + | chr8.3:52924633-52924652 | None:intergenic | 30.0% | |
| CTGCTTAAGTATATCAATGA+GGG | + | chr8.3:52925172-52925191 | None:intergenic | 30.0% | |
| GATATACTTAAGCAGAAAAC+TGG | - | chr8.3:52925177-52925196 | MS.gene36081:intron | 30.0% | |
| GGGAAAGAAAATATAGATGT+TGG | - | chr8.3:52925198-52925217 | MS.gene36081:intron | 30.0% | |
| TCTGCTTAAGTATATCAATG+AGG | + | chr8.3:52925173-52925192 | None:intergenic | 30.0% | |
| TGAAGAAACAGATGAAGATA+GGG | - | chr8.3:52925098-52925117 | MS.gene36081:intron | 30.0% | |
| TGATAAGGAATATCCAGATA+CGG | - | chr8.3:52924457-52924476 | MS.gene36081:CDS | 30.0% | |
| TGATGATTTCAAGGAATTTG+TGG | - | chr8.3:52924849-52924868 | MS.gene36081:intron | 30.0% | |
| ! | AAAGCTGAATGATAATGATG+AGG | - | chr8.3:52925386-52925405 | MS.gene36081:intron | 30.0% |
| ! | AAGCTGAATGATAATGATGA+GGG | - | chr8.3:52925387-52925406 | MS.gene36081:intron | 30.0% |
| ! | CCAAAAACATCAAAAAGTGT+AGG | + | chr8.3:52925234-52925253 | None:intergenic | 30.0% |
| ! | CTTTTGCTTAAGAAACTCTT+GGG | + | chr8.3:52925370-52925389 | None:intergenic | 30.0% |
| !! | CCTACACTTTTTGATGTTTT+TGG | - | chr8.3:52925231-52925250 | MS.gene36081:intron | 30.0% |
| !! | TAAAATTCGAACATTGGTTC+CGG | + | chr8.3:52924627-52924646 | None:intergenic | 30.0% |
| !! | TTGTTCATTATAGTGGACAT+GGG | - | chr8.3:52924126-52924145 | MS.gene36081:CDS | 30.0% |
| !! | TTTGTTCATTATAGTGGACA+TGG | - | chr8.3:52924125-52924144 | MS.gene36081:CDS | 30.0% |
| AAATGCTTGATCGAACGTTA+CGG | - | chr8.3:52923978-52923997 | MS.gene36081:CDS | 35.0% | |
| ACAAGAAAGGATCATCAACA+TGG | + | chr8.3:52925716-52925735 | None:intergenic | 35.0% | |
| AGTAAGCATGAAGTATATGC+TGG | - | chr8.3:52925444-52925463 | MS.gene36081:CDS | 35.0% | |
| ATAAGCATTAGCTGCATTTC+CGG | + | chr8.3:52925553-52925572 | None:intergenic | 35.0% | |
| ATATAGATGTTGGTCAACTG+AGG | - | chr8.3:52925208-52925227 | MS.gene36081:intron | 35.0% | |
| ATATCAATGAGGGTTGAAAG+TGG | + | chr8.3:52925162-52925181 | None:intergenic | 35.0% | |
| CATGAATTGAAAGGAACAGA+AGG | - | chr8.3:52924675-52924694 | MS.gene36081:CDS | 35.0% | |
| GATTTCAAGGAATTTGTGGA+TGG | - | chr8.3:52924853-52924872 | MS.gene36081:intron | 35.0% | |
| GTGAACAGATGATGATTTCA+AGG | - | chr8.3:52924840-52924859 | MS.gene36081:intron | 35.0% | |
| GTGATGAGATTCATATCAGA+AGG | + | chr8.3:52924212-52924231 | None:intergenic | 35.0% | |
| TCTGATATGAATCTCATCAC+TGG | - | chr8.3:52924212-52924231 | MS.gene36081:CDS | 35.0% | |
| TGCAATACAGGCTATAATTG+AGG | - | chr8.3:52925587-52925606 | MS.gene36081:CDS | 35.0% | |
| TTTCAAGGAATTTGTGGATG+GGG | - | chr8.3:52924855-52924874 | MS.gene36081:intron | 35.0% | |
| ! | CTGCTGTTTGTTCATTATAG+TGG | - | chr8.3:52924119-52924138 | MS.gene36081:CDS | 35.0% |
| ! | GCTTTTGCTTAAGAAACTCT+TGG | + | chr8.3:52925371-52925390 | None:intergenic | 35.0% |
| ! | GTAGTTGATTCCGATCAATA+CGG | + | chr8.3:52923904-52923923 | None:intergenic | 35.0% |
| ! | TGATGGTGCAATTACATACT+CGG | - | chr8.3:52925614-52925633 | MS.gene36081:CDS | 35.0% |
| ACCTATTCTTCACTCCATGT+GGG | + | chr8.3:52925134-52925153 | None:intergenic | 40.0% | |
| AGAGAGAAGCTACAGAAAGA+TGG | - | chr8.3:52925654-52925673 | MS.gene36081:CDS | 40.0% | |
| AGCTTTCAGCAATGCAATAC+AGG | - | chr8.3:52925575-52925594 | MS.gene36081:CDS | 40.0% | |
| AGGTAAGATTGTCTCCATAG+TGG | - | chr8.3:52924578-52924597 | MS.gene36081:CDS | 40.0% | |
| ATACTCGGAGCTTATTCTCA+AGG | - | chr8.3:52925629-52925648 | MS.gene36081:CDS | 40.0% | |
| ATTGATCGGAATCAACTACC+CGG | - | chr8.3:52923905-52923924 | MS.gene36081:CDS | 40.0% | |
| CGTCTTATGTTCTTTCCTGT+CGG | + | chr8.3:52924059-52924078 | None:intergenic | 40.0% | |
| CTTTCTGCATAGGAAAGTTG+AGG | - | chr8.3:52925014-52925033 | MS.gene36081:intron | 40.0% | |
| GAACATAAGACGTGTTCTGT+CGG | - | chr8.3:52924067-52924086 | MS.gene36081:CDS | 40.0% | |
| GATTCTGGTCAATTCCACTA+TGG | + | chr8.3:52924595-52924614 | None:intergenic | 40.0% | |
| GCTATAATTGAGGAGACTGA+TGG | - | chr8.3:52925597-52925616 | MS.gene36081:CDS | 40.0% | |
| GGAAATGCAGCTAATGCTTA+TGG | - | chr8.3:52925552-52925571 | MS.gene36081:CDS | 40.0% | |
| GGAACAAAAGCAGAATTACG+AGG | - | chr8.3:52923927-52923946 | MS.gene36081:CDS | 40.0% | |
| GTGGCATGAATCAGATACAA+TGG | + | chr8.3:52924902-52924921 | None:intergenic | 40.0% | |
| TGGCTTGATTGAAGAAGCTA+AGG | - | chr8.3:52924927-52924946 | MS.gene36081:intron | 40.0% | |
| TGGTTAATAGAGCTTTCGTC+TGG | - | chr8.3:52924349-52924368 | MS.gene36081:CDS | 40.0% | |
| TGTAGTTGGAATTCCGTATC+TGG | + | chr8.3:52924473-52924492 | None:intergenic | 40.0% | |
| ! | GATCGAACGTTACGGTTTTT+CGG | - | chr8.3:52923986-52924005 | MS.gene36081:CDS | 40.0% |
| !! | CGTAATTCTGCTTTTGTTCC+CGG | + | chr8.3:52923927-52923946 | None:intergenic | 40.0% |
| !! | GTAATTCTGCTTTTGTTCCC+GGG | + | chr8.3:52923926-52923945 | None:intergenic | 40.0% |
| !!! | CATCACTGTTTTGATCGACA+CGG | - | chr8.3:52924016-52924035 | MS.gene36081:CDS | 40.0% |
| AAAGCCAGACAATCCAAAGC+CGG | + | chr8.3:52924998-52925017 | None:intergenic | 45.0% | |
| AAGGGAGAAGAGGAACATTC+TGG | - | chr8.3:52924970-52924989 | MS.gene36081:intron | 45.0% | |
| ACCAGTATCATCATCCTCTC+CGG | + | chr8.3:52924171-52924190 | None:intergenic | 45.0% | |
| ATCTTGAACAAGCTCCAGCA+TGG | - | chr8.3:52925294-52925313 | MS.gene36081:intron | 45.0% | |
| ATGAAATCCCCTGGACTCAA+TGG | + | chr8.3:52925043-52925062 | None:intergenic | 45.0% | |
| GAAGAAGCTAAGGAGCAGAT+AGG | - | chr8.3:52924937-52924956 | MS.gene36081:intron | 45.0% | |
| GAAGAGGAACATTCTGGATC+CGG | - | chr8.3:52924976-52924995 | MS.gene36081:intron | 45.0% | |
| GACCAGAATCTCACAATCTC+CGG | - | chr8.3:52924605-52924624 | MS.gene36081:CDS | 45.0% | |
| GACCTATTCTTCACTCCATG+TGG | + | chr8.3:52925135-52925154 | None:intergenic | 45.0% | |
| GTATCTGATTCATGCCACAG+TGG | - | chr8.3:52924904-52924923 | MS.gene36081:intron | 45.0% | |
| TCCCACATGGAGTGAAGAAT+AGG | - | chr8.3:52925130-52925149 | MS.gene36081:intron | 45.0% | |
| TGATCACTGCAATAGAGTCC+TGG | + | chr8.3:52925693-52925712 | None:intergenic | 45.0% | |
| TTCCGGAGATTGTGAGATTC+TGG | + | chr8.3:52924610-52924629 | None:intergenic | 45.0% | |
| TTGATCGGAATCAACTACCC+GGG | - | chr8.3:52923906-52923925 | MS.gene36081:CDS | 45.0% | |
| TTTCTTCATCCCTGCGTGTA+TGG | + | chr8.3:52925086-52925105 | None:intergenic | 45.0% | |
| ! | CAGATAGGAGAGAGCACAAA+GGG | - | chr8.3:52924952-52924971 | MS.gene36081:intron | 45.0% |
| ! | GATGGATTCACTCAAAAGCC+AGG | - | chr8.3:52925672-52925691 | MS.gene36081:CDS | 45.0% |
| ! | GCGAGAAAAGCCGTATTGAT+CGG | - | chr8.3:52923891-52923910 | MS.gene36081:CDS | 45.0% |
| !! | GATTGTCTGGCTTTCTGCAT+AGG | - | chr8.3:52925004-52925023 | MS.gene36081:intron | 45.0% |
| AAGGAACAGAAGGGAACGTG+TGG | - | chr8.3:52924685-52924704 | MS.gene36081:CDS | 50.0% | |
| ACAAGGTGGGATACTGGGAA+TGG | - | chr8.3:52925332-52925351 | MS.gene36081:intron | 50.0% | |
| ACCGGAGAGGATGATGATAC+TGG | - | chr8.3:52924167-52924186 | MS.gene36081:CDS | 50.0% | |
| ACTCGTCTTCCTGCTGAAAC+CGG | - | chr8.3:52924149-52924168 | MS.gene36081:CDS | 50.0% | |
| AGGGATATCGAACTCCCACA+TGG | - | chr8.3:52925117-52925136 | MS.gene36081:intron | 50.0% | |
| AGGGGATTTCATGTCCCTTC+AGG | - | chr8.3:52925051-52925070 | MS.gene36081:intron | 50.0% | |
| ATGGGGTTCCTAGAGGATGT+AGG | - | chr8.3:52924872-52924891 | MS.gene36081:intron | 50.0% | |
| ATGGTCAGCCTACATCCTCT+AGG | + | chr8.3:52924883-52924902 | None:intergenic | 50.0% | |
| CTTCAATCAAGCCACCACTG+TGG | + | chr8.3:52924921-52924940 | None:intergenic | 50.0% | |
| GAACATTCTGGATCCGGCTT+TGG | - | chr8.3:52924982-52925001 | MS.gene36081:intron | 50.0% | |
| GACAAGCATCTGCTGAAGTC+TGG | + | chr8.3:52925527-52925546 | None:intergenic | 50.0% | |
| TATGCTGGATCGTCAAAGCG+CGG | - | chr8.3:52925459-52925478 | MS.gene36081:CDS | 50.0% | |
| TATGGCGACGCAATCCTGAA+GGG | + | chr8.3:52925068-52925087 | None:intergenic | 50.0% | |
| TCTGATTCATGCCACAGTGG+TGG | - | chr8.3:52924907-52924926 | MS.gene36081:intron | 50.0% | |
| TGAAGGGACATGAAATCCCC+TGG | + | chr8.3:52925052-52925071 | None:intergenic | 50.0% | |
| TGAGGATGCCATTGAGTCCA+GGG | - | chr8.3:52925032-52925051 | MS.gene36081:intron | 50.0% | |
| TTGAACAAGCTCCAGCATGG+AGG | - | chr8.3:52925297-52925316 | MS.gene36081:intron | 50.0% | |
| TTGAGGATGCCATTGAGTCC+AGG | - | chr8.3:52925031-52925050 | MS.gene36081:intron | 50.0% | |
| TTTGTGGATGGGGTTCCTAG+AGG | - | chr8.3:52924865-52924884 | MS.gene36081:intron | 50.0% | |
| ! | AGAGAGCACAAAGGGAGAAG+AGG | - | chr8.3:52924960-52924979 | MS.gene36081:intron | 50.0% |
| ! | GCAGATAGGAGAGAGCACAA+AGG | - | chr8.3:52924951-52924970 | MS.gene36081:intron | 50.0% |
| AACAAGCTCCAGCATGGAGG+TGG | - | chr8.3:52925300-52925319 | MS.gene36081:intron | 55.0% | |
| AAGACGTGTTCTGTCGGAGC+TGG | - | chr8.3:52924073-52924092 | MS.gene36081:CDS | 55.0% | |
| ACTTCCCACTTCCGTCTCCA+TGG | + | chr8.3:52925427-52925446 | None:intergenic | 55.0% | |
| AGCGGTGGGATTCTGATGAG+CGG | - | chr8.3:52925489-52925508 | MS.gene36081:CDS | 55.0% | |
| AGGTGGACAAGGTGGGATAC+TGG | - | chr8.3:52925326-52925345 | MS.gene36081:intron | 55.0% | |
| AGGTGGGATACTGGGAATGG+TGG | - | chr8.3:52925335-52925354 | MS.gene36081:intron | 55.0% | |
| ATTGCGTCGCCATACACGCA+GGG | - | chr8.3:52925074-52925093 | MS.gene36081:intron | 55.0% | |
| CGACACGGATTCGTCGTACA+CGG | - | chr8.3:52924031-52924050 | MS.gene36081:CDS | 55.0% | |
| CTCATCAGAATCCCACCGCT+TGG | + | chr8.3:52925489-52925508 | None:intergenic | 55.0% | |
| CTGGTCAGATCTTCGGAGGA+TGG | - | chr8.3:52924092-52924111 | MS.gene36081:CDS | 55.0% | |
| GAGGATGCCATTGAGTCCAG+GGG | - | chr8.3:52925033-52925052 | MS.gene36081:intron | 55.0% | |
| GAGGATGCGTAAACGACGTG+TGG | - | chr8.3:52923946-52923965 | MS.gene36081:CDS | 55.0% | |
| GATGCGTAAACGACGTGTGG+AGG | - | chr8.3:52923949-52923968 | MS.gene36081:CDS | 55.0% | |
| GCATTAGCTGCATTTCCGGC+AGG | + | chr8.3:52925549-52925568 | None:intergenic | 55.0% | |
| GGGATATGCAAAGCCTGCCA+TGG | - | chr8.3:52925407-52925426 | MS.gene36081:CDS | 55.0% | |
| GGTGGACAAGGTGGGATACT+GGG | - | chr8.3:52925327-52925346 | MS.gene36081:intron | 55.0% | |
| GGTGGGATACTGGGAATGGT+GGG | - | chr8.3:52925336-52925355 | MS.gene36081:intron | 55.0% | |
| GTATGGCGACGCAATCCTGA+AGG | + | chr8.3:52925069-52925088 | None:intergenic | 55.0% | |
| GTCGGAGCTGGTCAGATCTT+CGG | - | chr8.3:52924085-52924104 | MS.gene36081:CDS | 55.0% | |
| GTGGTGAAGGTGGACAAGGT+GGG | - | chr8.3:52925319-52925338 | MS.gene36081:intron | 55.0% | |
| TCAAAGCGCGGTCTTCCAAG+CGG | - | chr8.3:52925471-52925490 | MS.gene36081:CDS | 55.0% | |
| TCAGCAGATGCTTGTCCTGC+CGG | - | chr8.3:52925531-52925550 | MS.gene36081:CDS | 55.0% | |
| TCATCCTCTCCGGTTTCAGC+AGG | + | chr8.3:52924161-52924180 | None:intergenic | 55.0% | |
| TCTTCCTGCTGAAACCGGAG+AGG | - | chr8.3:52924154-52924173 | MS.gene36081:CDS | 55.0% | |
| TGCAAAGCCTGCCATGGAGA+CGG | - | chr8.3:52925413-52925432 | MS.gene36081:CDS | 55.0% | |
| !! | GGATCCGGCTTTGGATTGTC+TGG | - | chr8.3:52924991-52925010 | MS.gene36081:intron | 55.0% |
| CACCTTCACCACCTCCATGC+TGG | + | chr8.3:52925311-52925330 | None:intergenic | 60.0% | |
| CAGCATGGAGGTGGTGAAGG+TGG | - | chr8.3:52925309-52925328 | MS.gene36081:intron | 60.0% | |
| CCTGCCATGGAGACGGAAGT+GGG | - | chr8.3:52925420-52925439 | MS.gene36081:CDS | 60.0% | |
| CTCCAGCATGGAGGTGGTGA+AGG | - | chr8.3:52925306-52925325 | MS.gene36081:intron | 60.0% | |
| GATTGCGTCGCCATACACGC+AGG | - | chr8.3:52925073-52925092 | MS.gene36081:intron | 60.0% | |
| GGAGCTGGTCAGATCTTCGG+AGG | - | chr8.3:52924088-52924107 | MS.gene36081:CDS | 60.0% | |
| GGAGGTGGTGAAGGTGGACA+AGG | - | chr8.3:52925315-52925334 | MS.gene36081:intron | 60.0% | |
| GGTGGTGAAGGTGGACAAGG+TGG | - | chr8.3:52925318-52925337 | MS.gene36081:intron | 60.0% | |
| AAGCGCGGTCTTCCAAGCGG+TGG | - | chr8.3:52925474-52925493 | MS.gene36081:CDS | 65.0% | |
| AGCGCGGTCTTCCAAGCGGT+GGG | - | chr8.3:52925475-52925494 | MS.gene36081:CDS | 65.0% | |
| CCCACTTCCGTCTCCATGGC+AGG | + | chr8.3:52925423-52925442 | None:intergenic | 65.0% | |
| GCCTGCCATGGAGACGGAAG+TGG | - | chr8.3:52925419-52925438 | MS.gene36081:CDS | 65.0% | |
| TCGTCGTACACGGAGCCGAC+AGG | - | chr8.3:52924041-52924060 | MS.gene36081:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 52923888 | 52925740 | 52923888 | ID=MS.gene36081 |
| chr8.3 | mRNA | 52923888 | 52925740 | 52923888 | ID=MS.gene36081.t1;Parent=MS.gene36081 |
| chr8.3 | exon | 52925395 | 52925740 | 52925395 | ID=MS.gene36081.t1.exon1;Parent=MS.gene36081.t1 |
| chr8.3 | CDS | 52925395 | 52925740 | 52925395 | ID=cds.MS.gene36081.t1;Parent=MS.gene36081.t1 |
| chr8.3 | exon | 52923888 | 52924780 | 52923888 | ID=MS.gene36081.t1.exon2;Parent=MS.gene36081.t1 |
| chr8.3 | CDS | 52923888 | 52924780 | 52923888 | ID=cds.MS.gene36081.t1;Parent=MS.gene36081.t1 |
| Gene Sequence |
| Protein sequence |
