Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39338.t1 | RHN38812.1 | 73.6 | 447 | 73 | 1 | 40 | 441 | 88 | 534 | 2.80E-128 | 468.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39338.t1 | A0A396GAR2 | 73.6 | 447 | 73 | 1 | 40 | 441 | 88 | 534 | 2.0e-128 | 468.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39338 | 0.823893 | 1.08E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene39338 | 0.824595 | 7.41E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene39338 | 0.832453 | 9.37E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene39338 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene39338 | 0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene049915 | MS.gene39338 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene050168 | MS.gene39338 | 0.802481 | 5.50E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene39338 | 0.856456 | 3.18E-62 | -1.69E-46 |
| MS.gene050227 | MS.gene39338 | 0.858299 | 9.06E-63 | -1.69E-46 |
| MS.gene050228 | MS.gene39338 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene39338 | 0.837352 | 5.47E-57 | -1.69E-46 |
| MS.gene050330 | MS.gene39338 | -0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene39338 | 0.831333 | 1.77E-55 | -1.69E-46 |
| MS.gene050558 | MS.gene39338 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene39338 | -0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene39338 | 0.830412 | 2.98E-55 | -1.69E-46 |
| MS.gene050680 | MS.gene39338 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene39338 | 0.827677 | 1.37E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene39338 | 0.848422 | 6.19E-60 | -1.69E-46 |
| MS.gene051983 | MS.gene39338 | 0.869331 | 3.36E-66 | -1.69E-46 |
| MS.gene052011 | MS.gene39338 | -0.80849 | 3.02E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene39338 | 0.819704 | 1.01E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene39338 | 0.830461 | 2.90E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene39338 | 0.81693 | 4.29E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene39338 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene39338 | -0.807296 | 5.42E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene39338 | 0.81728 | 3.58E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene39338 | 0.825759 | 3.93E-54 | -1.69E-46 |
| MS.gene053577 | MS.gene39338 | 0.82256 | 2.22E-53 | -1.69E-46 |
| MS.gene053584 | MS.gene39338 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene39338 | 0.863255 | 2.84E-64 | -1.69E-46 |
| MS.gene054070 | MS.gene39338 | 0.812737 | 3.65E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene39338 | 0.808716 | 2.70E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene39338 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene39338 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene054826 | MS.gene39338 | 0.800278 | 1.55E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene39338 | 0.876417 | 1.42E-68 | -1.69E-46 |
| MS.gene054942 | MS.gene39338 | 0.802802 | 4.72E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene39338 | 0.848188 | 7.19E-60 | -1.69E-46 |
| MS.gene05510 | MS.gene39338 | 0.802662 | 5.05E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene39338 | 0.805403 | 1.36E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene39338 | 0.823291 | 1.50E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene39338 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene055859 | MS.gene39338 | 0.805227 | 1.48E-49 | -1.69E-46 |
| MS.gene056447 | MS.gene39338 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene39338 | 0.827415 | 1.58E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene39338 | 0.871488 | 6.58E-67 | -1.69E-46 |
| MS.gene057121 | MS.gene39338 | 0.838311 | 3.10E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene39338 | 0.834283 | 3.28E-56 | -1.69E-46 |
| MS.gene05761 | MS.gene39338 | 0.817898 | 2.60E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene39338 | 0.802662 | 5.04E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene39338 | 0.826827 | 2.19E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene39338 | 0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene39338 | 0.863743 | 2.00E-64 | -1.69E-46 |
| MS.gene058710 | MS.gene39338 | 0.823245 | 1.54E-53 | -1.69E-46 |
| MS.gene058739 | MS.gene39338 | 0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene39338 | 0.81198 | 5.34E-51 | -1.69E-46 |
| MS.gene058833 | MS.gene39338 | 0.804122 | 2.51E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene39338 | 0.815369 | 9.58E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene39338 | 0.822653 | 2.11E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene39338 | 0.840514 | 8.31E-58 | -1.69E-46 |
| MS.gene059161 | MS.gene39338 | 0.804676 | 1.93E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene39338 | 0.822972 | 1.78E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene39338 | 0.840486 | 8.45E-58 | -1.69E-46 |
| MS.gene059899 | MS.gene39338 | 0.813914 | 2.01E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene39338 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene39338 | -0.80663 | 7.49E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene39338 | 0.813102 | 3.03E-51 | -1.69E-46 |
| MS.gene061114 | MS.gene39338 | -0.835694 | 1.45E-56 | -1.69E-46 |
| MS.gene061159 | MS.gene39338 | 0.805742 | 1.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39338.t1 | MTR_0874s0010 | 94.156 | 154 | 9 | 0 | 288 | 441 | 1 | 154 | 8.64e-98 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39338.t1 | AT2G37920 | 68.317 | 101 | 32 | 0 | 40 | 140 | 87 | 187 | 1.16e-43 | 154 |
Find 158 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTCTCCTTTGAATTA+TGG | 0.136407 | 8.2:+81387221 | MS.gene39338:CDS |
| ATTATTCTTCTTTGAATTCT+AGG | 0.168750 | 8.2:+81387549 | MS.gene39338:CDS |
| CTTCTTCTCCTTTGAATTAT+GGG | 0.214225 | 8.2:+81387222 | MS.gene39338:CDS |
| AGATACCGAAATTTATGATA+TGG | 0.227787 | 8.2:+81387976 | MS.gene39338:CDS |
| TGATGAGCAGCTCAAGGTTT+TGG | 0.278740 | 8.2:+81386962 | MS.gene39338:CDS |
| CTGCTAGGTTCTTTCCTAAA+GGG | 0.284470 | 8.2:+81387072 | MS.gene39338:CDS |
| TTTATTCCAAAGGGTGTAGA+TGG | 0.302620 | 8.2:+81387626 | MS.gene39338:CDS |
| ATGAGAGTAGGTATTCATTA+GGG | 0.307314 | 8.2:+81387498 | MS.gene39338:CDS |
| ATACTATGAACAACCCCTTT+AGG | 0.307915 | 8.2:-81387086 | None:intergenic |
| CAAACCCATATCATAAATTT+CGG | 0.327120 | 8.2:-81387981 | None:intergenic |
| AACCTGGTGGGTTTGACCTT+TGG | 0.327293 | 8.2:+81387000 | MS.gene39338:CDS |
| GATGGCAATTTCGGGAATAA+AGG | 0.329120 | 8.2:+81387704 | MS.gene39338:CDS |
| TTTATGTCAAAGGATGTTAA+TGG | 0.339335 | 8.2:+81387821 | MS.gene39338:CDS |
| AATGAGAGTAGGTATTCATT+AGG | 0.350069 | 8.2:+81387497 | MS.gene39338:CDS |
| GATACCGAAATTTATGATAT+GGG | 0.353338 | 8.2:+81387977 | MS.gene39338:CDS |
| GGTGATGCTGTTAGGTCTAA+TGG | 0.357522 | 8.2:+81387755 | MS.gene39338:CDS |
| AAGGATGTTAATGGGTCTAA+TGG | 0.358690 | 8.2:+81387830 | MS.gene39338:CDS |
| TCCATTGCAGGCAGGAGATA+TGG | 0.367211 | 8.2:+81387902 | MS.gene39338:CDS |
| ATTCTTCTCATTTGAGTACT+AGG | 0.372736 | 8.2:+81387438 | MS.gene39338:CDS |
| TCTCTGAGTTGGAGAGGCCT+TGG | 0.375598 | 8.2:+81386898 | MS.gene39338:CDS |
| TCTGCTAGGTTCTTTCCTAA+AGG | 0.378700 | 8.2:+81387071 | MS.gene39338:CDS |
| CTCTGAGTTGGAGAGGCCTT+GGG | 0.383541 | 8.2:+81386899 | MS.gene39338:CDS |
| CTAGCAGAAGGCAACTCATC+AGG | 0.385882 | 8.2:-81387056 | None:intergenic |
| TCACTAGTAACCTTCATATA+AGG | 0.389583 | 8.2:-81387113 | None:intergenic |
| CCAACAATGGTGATGCTGTT+AGG | 0.391142 | 8.2:+81387747 | MS.gene39338:CDS |
| AGAGGGAGTAATTCCATTGC+AGG | 0.400461 | 8.2:+81387890 | MS.gene39338:CDS |
| GGATTGAGAAAGAACGGAAA+TGG | 0.400821 | 8.2:+81387386 | MS.gene39338:CDS |
| ACCCCACCCGGGTACGTCCT+TGG | 0.402692 | 8.2:-81386756 | None:intergenic |
| AGAAGAATGTTCCCCATCAT+TGG | 0.409792 | 8.2:-81387423 | None:intergenic |
| ATGGCAATTTCGGGAATAAA+GGG | 0.411540 | 8.2:+81387705 | MS.gene39338:CDS |
| GCTTTGATAGAGAACAACTT+AGG | 0.416712 | 8.2:-81386939 | None:intergenic |
| CCTAACAGCATCACCATTGT+TGG | 0.423179 | 8.2:-81387747 | None:intergenic |
| TGCCACTTGGACACCCCACC+CGG | 0.423897 | 8.2:-81386768 | None:intergenic |
| TGGTGGGCCAAGGACGTACC+CGG | 0.430275 | 8.2:+81386749 | MS.gene39338:CDS |
| GGCAGTCGATTGCGAAAGAA+TGG | 0.430627 | 8.2:+81387263 | MS.gene39338:CDS |
| GCCAAGGACGTACCCGGGTG+GGG | 0.432059 | 8.2:+81386755 | MS.gene39338:CDS |
| AGGATGTTAATGGGTCTAAT+GGG | 0.439258 | 8.2:+81387831 | MS.gene39338:CDS |
| TTGAATGGCAGAACAAGAAC+AGG | 0.441966 | 8.2:+81386661 | None:intergenic |
| TTATGTCAAAGGATGTTAAT+GGG | 0.444096 | 8.2:+81387822 | MS.gene39338:CDS |
| AGGAGGTATCGGTCCAATGA+TGG | 0.447789 | 8.2:+81387410 | MS.gene39338:CDS |
| GTGGGGTGTCCAAGTGGCAG+TGG | 0.448779 | 8.2:+81386772 | MS.gene39338:CDS |
| GTTGGAGAGGCCTTGGGAGG+TGG | 0.450649 | 8.2:+81386905 | MS.gene39338:CDS |
| GGGCCAAGGACGTACCCGGG+TGG | 0.452437 | 8.2:+81386753 | MS.gene39338:CDS |
| TCCTTGGCCCACCACCCATT+CGG | 0.453379 | 8.2:-81386740 | None:intergenic |
| GATTGAGAAAGAACGGAAAT+GGG | 0.453467 | 8.2:+81387387 | MS.gene39338:CDS |
| GAATAATGATCTTCATTGTC+TGG | 0.454399 | 8.2:-81387533 | None:intergenic |
| TCCGACCCATCTACACCCTT+TGG | 0.454564 | 8.2:-81387632 | None:intergenic |
| CTTTGATAGAGAACAACTTA+GGG | 0.454597 | 8.2:-81386938 | None:intergenic |
| AGATCGAGGAGGAAGGAGAG+TGG | 0.463137 | 8.2:+81387791 | MS.gene39338:CDS |
| ATGATGGTGGTGAAGGGTAT+TGG | 0.466572 | 8.2:+81387168 | MS.gene39338:CDS |
| TCTTTGAATTCTAGGAGGAA+TGG | 0.471020 | 8.2:+81387557 | MS.gene39338:CDS |
| GACCTTTGGACGGAAAATGA+TGG | 0.473692 | 8.2:+81387014 | MS.gene39338:CDS |
| TCTCCTTCACATGCGAGGAA+TGG | 0.479275 | 8.2:+81387671 | MS.gene39338:CDS |
| CGTTCAACTGTGATCCGAAT+GGG | 0.479445 | 8.2:+81386726 | MS.gene39338:CDS |
| GGAGGTATCGGTCCAATGAT+GGG | 0.481646 | 8.2:+81387411 | MS.gene39338:CDS |
| GGAAGGAAGTTTATTCCAAA+GGG | 0.482831 | 8.2:+81387617 | MS.gene39338:CDS |
| GGCCAAGGACGTACCCGGGT+GGG | 0.483142 | 8.2:+81386754 | MS.gene39338:CDS |
| TCCGAATGGGTGGTGGGCCA+AGG | 0.486021 | 8.2:+81386739 | MS.gene39338:CDS |
| GCTGTTAGGTCTAATGGATC+TGG | 0.495565 | 8.2:+81387761 | MS.gene39338:CDS |
| GGAGGAAGGAGAGTGGAAAG+AGG | 0.496002 | 8.2:+81387798 | MS.gene39338:CDS |
| GGCTTCTCAACCACCTCCCA+AGG | 0.496571 | 8.2:-81386915 | None:intergenic |
| TGGAAAGAGGTTTATGTCAA+AGG | 0.497907 | 8.2:+81387811 | MS.gene39338:CDS |
| GATATGGGTTTGCAACAAGA+TGG | 0.500193 | 8.2:+81387992 | MS.gene39338:CDS |
| CTGATGAGTTGCCTTCTGCT+AGG | 0.501687 | 8.2:+81387057 | MS.gene39338:CDS |
| GAGGAAGAGGGCTGAGCTCA+AGG | 0.501941 | 8.2:+81386869 | MS.gene39338:intron |
| GGTTACTAGTGATGACTTGT+TGG | 0.508742 | 8.2:+81387124 | MS.gene39338:CDS |
| TAGTATCAAGCCTTATATGA+AGG | 0.508811 | 8.2:+81387103 | MS.gene39338:CDS |
| GAGAAGAATGCTCCCCATCA+TGG | 0.510637 | 8.2:-81387325 | None:intergenic |
| TCGTTCAACTGTGATCCGAA+TGG | 0.514392 | 8.2:+81386725 | MS.gene39338:CDS |
| TGCTAGGTTCTTTCCTAAAG+GGG | 0.514477 | 8.2:+81387073 | MS.gene39338:CDS |
| GGGTCTAATGGGATGTATGC+AGG | 0.514728 | 8.2:+81387842 | MS.gene39338:CDS |
| TCCATATCTCCTGCCTGCAA+TGG | 0.515308 | 8.2:-81387903 | None:intergenic |
| CAAGGCTGCCGTCTCTGAGT+TGG | 0.515966 | 8.2:+81386887 | MS.gene39338:CDS |
| GCTGATAGGTTTCAGAAACC+TGG | 0.517147 | 8.2:+81386984 | MS.gene39338:CDS |
| AGAATGAGGAAGCACGGGAA+TGG | 0.520786 | 8.2:+81387596 | MS.gene39338:CDS |
| CATACGCTTCCACTGCCACT+TGG | 0.521521 | 8.2:-81386781 | None:intergenic |
| ATTCATTAGGGGATGTTGAT+CGG | 0.523054 | 8.2:+81387510 | MS.gene39338:CDS |
| ATGTTGATCGGTCCCATGAT+GGG | 0.524280 | 8.2:+81387312 | MS.gene39338:CDS |
| ACGGAAATGGGAGGAGGTAT+CGG | 0.531125 | 8.2:+81387399 | MS.gene39338:CDS |
| AGAAGAATGCTCCCCATCAT+GGG | 0.534687 | 8.2:-81387324 | None:intergenic |
| TAGCAGAAGGCAACTCATCA+GGG | 0.534840 | 8.2:-81387055 | None:intergenic |
| AATGTTGATCGGTCCCATGA+TGG | 0.538551 | 8.2:+81387311 | MS.gene39338:CDS |
| TGAGGAAGCACGGGAATGGA+AGG | 0.547129 | 8.2:+81387600 | MS.gene39338:CDS |
| GTCCAAAGGTCAAACCCACC+AGG | 0.553425 | 8.2:-81387002 | None:intergenic |
| GGAGTAATTCCATTGCAGGC+AGG | 0.555506 | 8.2:+81387894 | MS.gene39338:CDS |
| TGCGAAAGAATGGGAATGGA+AGG | 0.556399 | 8.2:+81387273 | MS.gene39338:CDS |
| ACTGTGATCCGAATGGGTGG+TGG | 0.557980 | 8.2:+81386732 | MS.gene39338:CDS |
| CTAGAAAATGATGGTGGTGA+AGG | 0.558411 | 8.2:+81387161 | MS.gene39338:CDS |
| TGGAAGGAAGTTTATTCCAA+AGG | 0.560885 | 8.2:+81387616 | MS.gene39338:CDS |
| TGATATTAGATCGAGGAGGA+AGG | 0.568183 | 8.2:+81387784 | MS.gene39338:CDS |
| CGATTGCGAAAGAATGGGAA+TGG | 0.568665 | 8.2:+81387269 | MS.gene39338:CDS |
| GCAGTCGATTGCGAAAGAAT+GGG | 0.569522 | 8.2:+81387264 | MS.gene39338:CDS |
| ATGCTAGAATGAGGAAGCAC+GGG | 0.570036 | 8.2:+81387591 | MS.gene39338:CDS |
| GCTCCATTCCTCGCATGTGA+AGG | 0.570651 | 8.2:-81387674 | None:intergenic |
| GGTGGGCCAAGGACGTACCC+GGG | 0.571085 | 8.2:+81386750 | MS.gene39338:CDS |
| TCCAAAGGGTGTAGATGGGT+CGG | 0.572590 | 8.2:+81387631 | MS.gene39338:CDS |
| CTGCCGTCTCTGAGTTGGAG+AGG | 0.572800 | 8.2:+81386892 | MS.gene39338:CDS |
| TGGTGGGTTTGACCTTTGGA+CGG | 0.574252 | 8.2:+81387004 | MS.gene39338:CDS |
| CTTCTCCTTTGAATTATGGG+AGG | 0.575559 | 8.2:+81387225 | MS.gene39338:CDS |
| CTTCTCATTTGAGTACTAGG+AGG | 0.576406 | 8.2:+81387441 | MS.gene39338:CDS |
| TCATTCCTCCCATAATTCAA+AGG | 0.577456 | 8.2:-81387230 | None:intergenic |
| TAGAAAATGATGGTGGTGAA+GGG | 0.579764 | 8.2:+81387162 | MS.gene39338:CDS |
| GAATAAAGGGAGTGCAAGGA+GGG | 0.580424 | 8.2:+81387718 | MS.gene39338:CDS |
| GTTCTTCTCCTTCACATGCG+AGG | 0.582316 | 8.2:+81387666 | MS.gene39338:CDS |
| CAAATATTGATGCTAGAATG+AGG | 0.585058 | 8.2:+81387582 | MS.gene39338:CDS |
| ACTAGTGATGACTTGTTGGA+AGG | 0.585138 | 8.2:+81387128 | MS.gene39338:CDS |
| TTATTCCAAAGGGTGTAGAT+GGG | 0.587028 | 8.2:+81387627 | MS.gene39338:CDS |
| CAAAGCTGATGAGCAGCTCA+AGG | 0.588229 | 8.2:+81386956 | MS.gene39338:CDS |
| GGGAGGAATGAAGCGAGTGT+TGG | 0.589284 | 8.2:+81387242 | MS.gene39338:CDS |
| CGTGGTGGATTGAGAAAGAA+CGG | 0.589392 | 8.2:+81387380 | MS.gene39338:CDS |
| GAAAGAACGGAAATGGGAGG+AGG | 0.590748 | 8.2:+81387393 | MS.gene39338:CDS |
| ATTCTTCTTTGAATTCTAGG+AGG | 0.595094 | 8.2:+81387552 | MS.gene39338:CDS |
| TGAGTTGGAGAGGCCTTGGG+AGG | 0.596213 | 8.2:+81386902 | MS.gene39338:CDS |
| ATGAGTGAATTGAATATTCG+TGG | 0.598183 | 8.2:+81387362 | MS.gene39338:CDS |
| GATGCTAGAATGAGGAAGCA+CGG | 0.598567 | 8.2:+81387590 | MS.gene39338:CDS |
| ACCCGGGTGGGGTGTCCAAG+TGG | 0.601573 | 8.2:+81386766 | MS.gene39338:CDS |
| GAGGTATCGGTCCAATGATG+GGG | 0.604026 | 8.2:+81387412 | MS.gene39338:CDS |
| TTCAAACAATGCTTCACGAA+GGG | 0.605338 | 8.2:+81387943 | MS.gene39338:CDS |
| AATATATGAAATGAGGAAGA+GGG | 0.611111 | 8.2:+81386857 | MS.gene39338:intron |
| CTGTGATCCGAATGGGTGGT+GGG | 0.612200 | 8.2:+81386733 | MS.gene39338:CDS |
| GATAGGTTTCAGAAACCTGG+TGG | 0.612203 | 8.2:+81386987 | MS.gene39338:CDS |
| GATTCAGAAAGAATGAGAGT+AGG | 0.614189 | 8.2:+81387486 | MS.gene39338:CDS |
| AGATGATGTTCATGATGGTG+AGG | 0.616675 | 8.2:+81387193 | MS.gene39338:CDS |
| TGTTGATCGGTCCCATGATG+GGG | 0.619198 | 8.2:+81387313 | MS.gene39338:CDS |
| GAAAGAATGGGAATGGAAGG+AGG | 0.619892 | 8.2:+81387276 | MS.gene39338:CDS |
| AGCAACCTGACTCTACAAGC+TGG | 0.620354 | 8.2:+81388038 | MS.gene39338:CDS |
| GCCACTTGGACACCCCACCC+GGG | 0.621232 | 8.2:-81386767 | None:intergenic |
| ATCACAGTTGAACGAGAAGG+TGG | 0.621729 | 8.2:-81386717 | None:intergenic |
| TCTGATGTTCTAGAAAATGA+TGG | 0.623344 | 8.2:+81387152 | MS.gene39338:CDS |
| GGAATAAAGGGAGTGCAAGG+AGG | 0.625678 | 8.2:+81387717 | MS.gene39338:CDS |
| CGGATCACAGTTGAACGAGA+AGG | 0.627012 | 8.2:-81386720 | None:intergenic |
| CAGGAATGTGCTGTCCCTCA+CGG | 0.627917 | 8.2:+81386680 | MS.gene39338:CDS |
| ATAGGTTTCAGAAACCTGGT+GGG | 0.627960 | 8.2:+81386988 | MS.gene39338:CDS |
| TTAGGAAAGAACCTAGCAGA+AGG | 0.630171 | 8.2:-81387068 | None:intergenic |
| AGGAGTGAACTGAATGTTCG+TGG | 0.632328 | 8.2:+81387461 | MS.gene39338:CDS |
| TTGATAGAGAACAACTTAGG+GGG | 0.634929 | 8.2:-81386936 | None:intergenic |
| TCGGGAATAAAGGGAGTGCA+AGG | 0.635659 | 8.2:+81387714 | MS.gene39338:CDS |
| TGAGAGTAGGTATTCATTAG+GGG | 0.635950 | 8.2:+81387499 | MS.gene39338:CDS |
| TGAGAAAGAACGGAAATGGG+AGG | 0.647593 | 8.2:+81387390 | MS.gene39338:CDS |
| TGGTCAGATGATGTTCATGA+TGG | 0.647813 | 8.2:+81387188 | MS.gene39338:CDS |
| ATTTGTCAGAGAATGTTGAT+CGG | 0.655103 | 8.2:+81387300 | MS.gene39338:CDS |
| GATGTTCATGATGGTGAGGG+TGG | 0.656053 | 8.2:+81387197 | MS.gene39338:CDS |
| AGGCCTCTCCAACTCAGAGA+CGG | 0.658235 | 8.2:-81386895 | None:intergenic |
| TCAACTGTGATCCGAATGGG+TGG | 0.663322 | 8.2:+81386729 | MS.gene39338:CDS |
| AGCAGAAGGCAACTCATCAG+GGG | 0.664647 | 8.2:-81387054 | None:intergenic |
| GGACGGAAAATGATGGACCA+CGG | 0.666697 | 8.2:+81387021 | MS.gene39338:CDS |
| TTTGATAGAGAACAACTTAG+GGG | 0.666749 | 8.2:-81386937 | None:intergenic |
| GATGATGTTCATGATGGTGA+GGG | 0.668985 | 8.2:+81387194 | MS.gene39338:CDS |
| CTTCTGACAGAACACAGAGA+GGG | 0.672768 | 8.2:+81387873 | MS.gene39338:CDS |
| AGTGAATTGAATATTCGTGG+TGG | 0.678453 | 8.2:+81387365 | MS.gene39338:CDS |
| CTTCAAACAATGCTTCACGA+AGG | 0.679253 | 8.2:+81387942 | MS.gene39338:CDS |
| GCTTCTGACAGAACACAGAG+AGG | 0.682151 | 8.2:+81387872 | MS.gene39338:CDS |
| GATATGGAAAATATACTCAG+AGG | 0.693542 | 8.2:+81387918 | MS.gene39338:CDS |
| CTGGTGATATTAGATCGAGG+AGG | 0.701118 | 8.2:+81387780 | MS.gene39338:CDS |
| GATCTGGTGATATTAGATCG+AGG | 0.719396 | 8.2:+81387777 | MS.gene39338:CDS |
| AGTGAACTGAATGTTCGTGG+TGG | 0.720003 | 8.2:+81387464 | MS.gene39338:CDS |
| GATGTTCTAGAAAATGATGG+TGG | 0.729583 | 8.2:+81387155 | MS.gene39338:CDS |
| TCAGGGGTTTGAAACAACCG+TGG | 0.739131 | 8.2:-81387038 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTCTTCTTTGAATTCT+AGG | + | chr8.2:81387549-81387568 | MS.gene39338:CDS | 20.0% |
| ! | AAATATATGAAATGAGGAAG+AGG | + | chr8.2:81386856-81386875 | MS.gene39338:intron | 25.0% |
| ! | AATATATGAAATGAGGAAGA+GGG | + | chr8.2:81386857-81386876 | MS.gene39338:intron | 25.0% |
| ! | AGATACCGAAATTTATGATA+TGG | + | chr8.2:81387976-81387995 | MS.gene39338:CDS | 25.0% |
| ! | CAAACCCATATCATAAATTT+CGG | - | chr8.2:81387984-81388003 | None:intergenic | 25.0% |
| ! | GATACCGAAATTTATGATAT+GGG | + | chr8.2:81387977-81387996 | MS.gene39338:CDS | 25.0% |
| ! | TTATGTCAAAGGATGTTAAT+GGG | + | chr8.2:81387822-81387841 | MS.gene39338:CDS | 25.0% |
| ! | TTTATGTCAAAGGATGTTAA+TGG | + | chr8.2:81387821-81387840 | MS.gene39338:CDS | 25.0% |
| AATGAGAGTAGGTATTCATT+AGG | + | chr8.2:81387497-81387516 | MS.gene39338:CDS | 30.0% | |
| ATGAGAGTAGGTATTCATTA+GGG | + | chr8.2:81387498-81387517 | MS.gene39338:CDS | 30.0% | |
| ATGAGTGAATTGAATATTCG+TGG | + | chr8.2:81387362-81387381 | MS.gene39338:CDS | 30.0% | |
| ATTCTTCTCATTTGAGTACT+AGG | + | chr8.2:81387438-81387457 | MS.gene39338:CDS | 30.0% | |
| ATTCTTCTTTGAATTCTAGG+AGG | + | chr8.2:81387552-81387571 | MS.gene39338:CDS | 30.0% | |
| ATTTGTCAGAGAATGTTGAT+CGG | + | chr8.2:81387300-81387319 | MS.gene39338:CDS | 30.0% | |
| CAAATATTGATGCTAGAATG+AGG | + | chr8.2:81387582-81387601 | MS.gene39338:CDS | 30.0% | |
| CTTCTTCTCCTTTGAATTAT+GGG | + | chr8.2:81387222-81387241 | MS.gene39338:CDS | 30.0% | |
| CTTTGATAGAGAACAACTTA+GGG | - | chr8.2:81386941-81386960 | None:intergenic | 30.0% | |
| GAATAATGATCTTCATTGTC+TGG | - | chr8.2:81387536-81387555 | None:intergenic | 30.0% | |
| GATATGGAAAATATACTCAG+AGG | + | chr8.2:81387918-81387937 | MS.gene39338:CDS | 30.0% | |
| TCACTAGTAACCTTCATATA+AGG | - | chr8.2:81387116-81387135 | None:intergenic | 30.0% | |
| TCTTCTTCTCCTTTGAATTA+TGG | + | chr8.2:81387221-81387240 | MS.gene39338:CDS | 30.0% | |
| TTTGATAGAGAACAACTTAG+GGG | - | chr8.2:81386940-81386959 | None:intergenic | 30.0% | |
| ! | TAGTATCAAGCCTTATATGA+AGG | + | chr8.2:81387103-81387122 | MS.gene39338:CDS | 30.0% |
| !! | TCTGATGTTCTAGAAAATGA+TGG | + | chr8.2:81387152-81387171 | MS.gene39338:CDS | 30.0% |
| AGCGGCAAATATATGAAATG+AGG | + | chr8.2:81386850-81386869 | MS.gene39338:intron | 35.0% | |
| AGTGAATTGAATATTCGTGG+TGG | + | chr8.2:81387365-81387384 | MS.gene39338:CDS | 35.0% | |
| ATACTATGAACAACCCCTTT+AGG | - | chr8.2:81387089-81387108 | None:intergenic | 35.0% | |
| ATGGCAATTTCGGGAATAAA+GGG | + | chr8.2:81387705-81387724 | MS.gene39338:CDS | 35.0% | |
| ATTCATTAGGGGATGTTGAT+CGG | + | chr8.2:81387510-81387529 | MS.gene39338:CDS | 35.0% | |
| GATTCAGAAAGAATGAGAGT+AGG | + | chr8.2:81387486-81387505 | MS.gene39338:CDS | 35.0% | |
| GATTGAGAAAGAACGGAAAT+GGG | + | chr8.2:81387387-81387406 | MS.gene39338:CDS | 35.0% | |
| GCTTTGATAGAGAACAACTT+AGG | - | chr8.2:81386942-81386961 | None:intergenic | 35.0% | |
| GGAAGGAAGTTTATTCCAAA+GGG | + | chr8.2:81387617-81387636 | MS.gene39338:CDS | 35.0% | |
| TCATTCCTCCCATAATTCAA+AGG | - | chr8.2:81387233-81387252 | None:intergenic | 35.0% | |
| TGAGAGTAGGTATTCATTAG+GGG | + | chr8.2:81387499-81387518 | MS.gene39338:CDS | 35.0% | |
| TGGAAAGAGGTTTATGTCAA+AGG | + | chr8.2:81387811-81387830 | MS.gene39338:CDS | 35.0% | |
| TGGAAGGAAGTTTATTCCAA+AGG | + | chr8.2:81387616-81387635 | MS.gene39338:CDS | 35.0% | |
| TTCAAACAATGCTTCACGAA+GGG | + | chr8.2:81387943-81387962 | MS.gene39338:CDS | 35.0% | |
| TTGATAGAGAACAACTTAGG+GGG | - | chr8.2:81386939-81386958 | None:intergenic | 35.0% | |
| ! | AAGGATGTTAATGGGTCTAA+TGG | + | chr8.2:81387830-81387849 | MS.gene39338:CDS | 35.0% |
| ! | AGGATGTTAATGGGTCTAAT+GGG | + | chr8.2:81387831-81387850 | MS.gene39338:CDS | 35.0% |
| ! | TCTTTGAATTCTAGGAGGAA+TGG | + | chr8.2:81387557-81387576 | MS.gene39338:CDS | 35.0% |
| ! | TTATTCCAAAGGGTGTAGAT+GGG | + | chr8.2:81387627-81387646 | MS.gene39338:CDS | 35.0% |
| ! | TTTATTCCAAAGGGTGTAGA+TGG | + | chr8.2:81387626-81387645 | MS.gene39338:CDS | 35.0% |
| !! | GATGTTCTAGAAAATGATGG+TGG | + | chr8.2:81387155-81387174 | MS.gene39338:CDS | 35.0% |
| !! | TAGAAAATGATGGTGGTGAA+GGG | + | chr8.2:81387162-81387181 | MS.gene39338:CDS | 35.0% |
| AGAAGAATGTTCCCCATCAT+TGG | - | chr8.2:81387426-81387445 | None:intergenic | 40.0% | |
| ATAGGTTTCAGAAACCTGGT+GGG | + | chr8.2:81386988-81387007 | MS.gene39338:CDS | 40.0% | |
| CTGCTAGGTTCTTTCCTAAA+GGG | + | chr8.2:81387072-81387091 | MS.gene39338:CDS | 40.0% | |
| CTTCAAACAATGCTTCACGA+AGG | + | chr8.2:81387942-81387961 | MS.gene39338:CDS | 40.0% | |
| CTTCTCATTTGAGTACTAGG+AGG | + | chr8.2:81387441-81387460 | MS.gene39338:CDS | 40.0% | |
| CTTCTCCTTTGAATTATGGG+AGG | + | chr8.2:81387225-81387244 | MS.gene39338:CDS | 40.0% | |
| GATATGGGTTTGCAACAAGA+TGG | + | chr8.2:81387992-81388011 | MS.gene39338:CDS | 40.0% | |
| GATCTGGTGATATTAGATCG+AGG | + | chr8.2:81387777-81387796 | MS.gene39338:CDS | 40.0% | |
| GATGGCAATTTCGGGAATAA+AGG | + | chr8.2:81387704-81387723 | MS.gene39338:CDS | 40.0% | |
| GGATTGAGAAAGAACGGAAA+TGG | + | chr8.2:81387386-81387405 | MS.gene39338:CDS | 40.0% | |
| TCTGCTAGGTTCTTTCCTAA+AGG | + | chr8.2:81387071-81387090 | MS.gene39338:CDS | 40.0% | |
| TGATATTAGATCGAGGAGGA+AGG | + | chr8.2:81387784-81387803 | MS.gene39338:CDS | 40.0% | |
| TGCTAGGTTCTTTCCTAAAG+GGG | + | chr8.2:81387073-81387092 | MS.gene39338:CDS | 40.0% | |
| TGGTCAGATGATGTTCATGA+TGG | + | chr8.2:81387188-81387207 | MS.gene39338:CDS | 40.0% | |
| TTAGGAAAGAACCTAGCAGA+AGG | - | chr8.2:81387071-81387090 | None:intergenic | 40.0% | |
| TTTCATATATTTGCCGCTCC+CGG | - | chr8.2:81386848-81386867 | None:intergenic | 40.0% | |
| ! | AGATGATGTTCATGATGGTG+AGG | + | chr8.2:81387193-81387212 | MS.gene39338:CDS | 40.0% |
| ! | GATGATGTTCATGATGGTGA+GGG | + | chr8.2:81387194-81387213 | MS.gene39338:CDS | 40.0% |
| ! | GGTTACTAGTGATGACTTGT+TGG | + | chr8.2:81387124-81387143 | MS.gene39338:CDS | 40.0% |
| !! | ACTAGTGATGACTTGTTGGA+AGG | + | chr8.2:81387128-81387147 | MS.gene39338:CDS | 40.0% |
| !! | AGGAGGGTTTTATCCAACAA+TGG | + | chr8.2:81387734-81387753 | MS.gene39338:CDS | 40.0% |
| !! | CGAGTTTTGATGGCAATTTC+GGG | + | chr8.2:81387696-81387715 | MS.gene39338:CDS | 40.0% |
| !! | CTAGAAAATGATGGTGGTGA+AGG | + | chr8.2:81387161-81387180 | MS.gene39338:CDS | 40.0% |
| !! | GCGAGTTTTGATGGCAATTT+CGG | + | chr8.2:81387695-81387714 | MS.gene39338:CDS | 40.0% |
| AATGTTGATCGGTCCCATGA+TGG | + | chr8.2:81387311-81387330 | MS.gene39338:CDS | 45.0% | |
| AGAAGAATGCTCCCCATCAT+GGG | - | chr8.2:81387327-81387346 | None:intergenic | 45.0% | |
| AGAGGGAGTAATTCCATTGC+AGG | + | chr8.2:81387890-81387909 | MS.gene39338:CDS | 45.0% | |
| AGGAGTGAACTGAATGTTCG+TGG | + | chr8.2:81387461-81387480 | MS.gene39338:CDS | 45.0% | |
| AGTGAACTGAATGTTCGTGG+TGG | + | chr8.2:81387464-81387483 | MS.gene39338:CDS | 45.0% | |
| ATCACAGTTGAACGAGAAGG+TGG | - | chr8.2:81386720-81386739 | None:intergenic | 45.0% | |
| ATGTTGATCGGTCCCATGAT+GGG | + | chr8.2:81387312-81387331 | MS.gene39338:CDS | 45.0% | |
| CCTAACAGCATCACCATTGT+TGG | - | chr8.2:81387750-81387769 | None:intergenic | 45.0% | |
| CGATTGCGAAAGAATGGGAA+TGG | + | chr8.2:81387269-81387288 | MS.gene39338:CDS | 45.0% | |
| CGTTCAACTGTGATCCGAAT+GGG | + | chr8.2:81386726-81386745 | MS.gene39338:CDS | 45.0% | |
| CTGGTGATATTAGATCGAGG+AGG | + | chr8.2:81387780-81387799 | MS.gene39338:CDS | 45.0% | |
| CTTCTGACAGAACACAGAGA+GGG | + | chr8.2:81387873-81387892 | MS.gene39338:CDS | 45.0% | |
| GAAAGAATGGGAATGGAAGG+AGG | + | chr8.2:81387276-81387295 | MS.gene39338:CDS | 45.0% | |
| GACCTTTGGACGGAAAATGA+TGG | + | chr8.2:81387014-81387033 | MS.gene39338:CDS | 45.0% | |
| GATAGGTTTCAGAAACCTGG+TGG | + | chr8.2:81386987-81387006 | MS.gene39338:CDS | 45.0% | |
| GATGCTAGAATGAGGAAGCA+CGG | + | chr8.2:81387590-81387609 | MS.gene39338:CDS | 45.0% | |
| GCAGTCGATTGCGAAAGAAT+GGG | + | chr8.2:81387264-81387283 | MS.gene39338:CDS | 45.0% | |
| GCTGATAGGTTTCAGAAACC+TGG | + | chr8.2:81386984-81387003 | MS.gene39338:CDS | 45.0% | |
| GGTGATGCTGTTAGGTCTAA+TGG | + | chr8.2:81387755-81387774 | MS.gene39338:CDS | 45.0% | |
| TAGCAGAAGGCAACTCATCA+GGG | - | chr8.2:81387058-81387077 | None:intergenic | 45.0% | |
| TCGTTCAACTGTGATCCGAA+TGG | + | chr8.2:81386725-81386744 | MS.gene39338:CDS | 45.0% | |
| TGAGAAAGAACGGAAATGGG+AGG | + | chr8.2:81387390-81387409 | MS.gene39338:CDS | 45.0% | |
| TGCGAAAGAATGGGAATGGA+AGG | + | chr8.2:81387273-81387292 | MS.gene39338:CDS | 45.0% | |
| ! | ATGCTAGAATGAGGAAGCAC+GGG | + | chr8.2:81387591-81387610 | MS.gene39338:CDS | 45.0% |
| ! | CCAACAATGGTGATGCTGTT+AGG | + | chr8.2:81387747-81387766 | MS.gene39338:CDS | 45.0% |
| ! | GAATAAAGGGAGTGCAAGGA+GGG | + | chr8.2:81387718-81387737 | MS.gene39338:CDS | 45.0% |
| ! | GCTGTTAGGTCTAATGGATC+TGG | + | chr8.2:81387761-81387780 | MS.gene39338:CDS | 45.0% |
| ! | GTCCATCATTTTCCGTCCAA+AGG | - | chr8.2:81387019-81387038 | None:intergenic | 45.0% |
| ! | TGATGAGCAGCTCAAGGTTT+TGG | + | chr8.2:81386962-81386981 | MS.gene39338:CDS | 45.0% |
| ! | TTTTGCTACAGTGACCGTGA+GGG | - | chr8.2:81386697-81386716 | None:intergenic | 45.0% |
| !! | AGGAATGGAGCGAGTTTTGA+TGG | + | chr8.2:81387686-81387705 | MS.gene39338:CDS | 45.0% |
| !! | ATGATGGTGGTGAAGGGTAT+TGG | + | chr8.2:81387168-81387187 | MS.gene39338:CDS | 45.0% |
| !! | CGTGGTGGATTGAGAAAGAA+CGG | + | chr8.2:81387380-81387399 | MS.gene39338:CDS | 45.0% |
| !!! | AGCTCAAGGTTTTGGCTGAT+AGG | + | chr8.2:81386970-81386989 | MS.gene39338:CDS | 45.0% |
| AGCAACCTGACTCTACAAGC+TGG | + | chr8.2:81388038-81388057 | MS.gene39338:CDS | 50.0% | |
| AGCAGAAGGCAACTCATCAG+GGG | - | chr8.2:81387057-81387076 | None:intergenic | 50.0% | |
| CAAAGCTGATGAGCAGCTCA+AGG | + | chr8.2:81386956-81386975 | MS.gene39338:CDS | 50.0% | |
| CGGATCACAGTTGAACGAGA+AGG | - | chr8.2:81386723-81386742 | None:intergenic | 50.0% | |
| CTAGCAGAAGGCAACTCATC+AGG | - | chr8.2:81387059-81387078 | None:intergenic | 50.0% | |
| CTGATGAGTTGCCTTCTGCT+AGG | + | chr8.2:81387057-81387076 | MS.gene39338:CDS | 50.0% | |
| GAAAGAACGGAAATGGGAGG+AGG | + | chr8.2:81387393-81387412 | MS.gene39338:CDS | 50.0% | |
| GAAGGCCAAGCAACTCTTGA+AGG | + | chr8.2:81386812-81386831 | MS.gene39338:intron | 50.0% | |
| GAGAAGAATGCTCCCCATCA+TGG | - | chr8.2:81387328-81387347 | None:intergenic | 50.0% | |
| GCTTCTGACAGAACACAGAG+AGG | + | chr8.2:81387872-81387891 | MS.gene39338:CDS | 50.0% | |
| GGAGTAATTCCATTGCAGGC+AGG | + | chr8.2:81387894-81387913 | MS.gene39338:CDS | 50.0% | |
| GGCAGTCGATTGCGAAAGAA+TGG | + | chr8.2:81387263-81387282 | MS.gene39338:CDS | 50.0% | |
| GGGTCTAATGGGATGTATGC+AGG | + | chr8.2:81387842-81387861 | MS.gene39338:CDS | 50.0% | |
| GTTCTTCTCCTTCACATGCG+AGG | + | chr8.2:81387666-81387685 | MS.gene39338:CDS | 50.0% | |
| TCAACTGTGATCCGAATGGG+TGG | + | chr8.2:81386729-81386748 | MS.gene39338:CDS | 50.0% | |
| TCACGCCTTCAAGAGTTGCT+TGG | - | chr8.2:81386820-81386839 | None:intergenic | 50.0% | |
| TCCATATCTCCTGCCTGCAA+TGG | - | chr8.2:81387906-81387925 | None:intergenic | 50.0% | |
| TCCATTGCAGGCAGGAGATA+TGG | + | chr8.2:81387902-81387921 | MS.gene39338:CDS | 50.0% | |
| TCTCCTTCACATGCGAGGAA+TGG | + | chr8.2:81387671-81387690 | MS.gene39338:CDS | 50.0% | |
| TGTTGATCGGTCCCATGATG+GGG | + | chr8.2:81387313-81387332 | MS.gene39338:CDS | 50.0% | |
| ! | ACGGAAATGGGAGGAGGTAT+CGG | + | chr8.2:81387399-81387418 | MS.gene39338:CDS | 50.0% |
| ! | AGAATGAGGAAGCACGGGAA+TGG | + | chr8.2:81387596-81387615 | MS.gene39338:CDS | 50.0% |
| ! | CAAGAGTTGCTTGGCCTTCT+TGG | - | chr8.2:81386811-81386830 | None:intergenic | 50.0% |
| ! | GATGTTCATGATGGTGAGGG+TGG | + | chr8.2:81387197-81387216 | MS.gene39338:CDS | 50.0% |
| ! | GGAATAAAGGGAGTGCAAGG+AGG | + | chr8.2:81387717-81387736 | MS.gene39338:CDS | 50.0% |
| ! | GTTTTGCTACAGTGACCGTG+AGG | - | chr8.2:81386698-81386717 | None:intergenic | 50.0% |
| ! | TCAGGGGTTTGAAACAACCG+TGG | - | chr8.2:81387041-81387060 | None:intergenic | 50.0% |
| ! | TCCAAAGGGTGTAGATGGGT+CGG | + | chr8.2:81387631-81387650 | MS.gene39338:CDS | 50.0% |
| ! | TCGGGAATAAAGGGAGTGCA+AGG | + | chr8.2:81387714-81387733 | MS.gene39338:CDS | 50.0% |
| !! | AACCTGGTGGGTTTGACCTT+TGG | + | chr8.2:81387000-81387019 | MS.gene39338:CDS | 50.0% |
| !! | AGGAGGTATCGGTCCAATGA+TGG | + | chr8.2:81387410-81387429 | MS.gene39338:CDS | 50.0% |
| !! | GAGGTATCGGTCCAATGATG+GGG | + | chr8.2:81387412-81387431 | MS.gene39338:CDS | 50.0% |
| !! | GGACGGAAAATGATGGACCA+CGG | + | chr8.2:81387021-81387040 | MS.gene39338:CDS | 50.0% |
| !! | GGAGGTATCGGTCCAATGAT+GGG | + | chr8.2:81387411-81387430 | MS.gene39338:CDS | 50.0% |
| !! | TGGTGGGTTTGACCTTTGGA+CGG | + | chr8.2:81387004-81387023 | MS.gene39338:CDS | 50.0% |
| ACTGTGATCCGAATGGGTGG+TGG | + | chr8.2:81386732-81386751 | MS.gene39338:CDS | 55.0% | |
| AGATCGAGGAGGAAGGAGAG+TGG | + | chr8.2:81387791-81387810 | MS.gene39338:CDS | 55.0% | |
| AGGCCTCTCCAACTCAGAGA+CGG | - | chr8.2:81386898-81386917 | None:intergenic | 55.0% | |
| CAGGAATGTGCTGTCCCTCA+CGG | + | chr8.2:81386680-81386699 | MS.gene39338:CDS | 55.0% | |
| CATACGCTTCCACTGCCACT+TGG | - | chr8.2:81386784-81386803 | None:intergenic | 55.0% | |
| CTGTGATCCGAATGGGTGGT+GGG | + | chr8.2:81386733-81386752 | MS.gene39338:CDS | 55.0% | |
| GAAGCGTATGCAGGCCAAGA+AGG | + | chr8.2:81386794-81386813 | MS.gene39338:intron | 55.0% | |
| GCTCCATTCCTCGCATGTGA+AGG | - | chr8.2:81387677-81387696 | None:intergenic | 55.0% | |
| GGAGGAAGGAGAGTGGAAAG+AGG | + | chr8.2:81387798-81387817 | MS.gene39338:CDS | 55.0% | |
| GGGAGGAATGAAGCGAGTGT+TGG | + | chr8.2:81387242-81387261 | MS.gene39338:CDS | 55.0% | |
| GTCCAAAGGTCAAACCCACC+AGG | - | chr8.2:81387005-81387024 | None:intergenic | 55.0% | |
| TCCGACCCATCTACACCCTT+TGG | - | chr8.2:81387635-81387654 | None:intergenic | 55.0% | |
| ! | CTCTGAGTTGGAGAGGCCTT+GGG | + | chr8.2:81386899-81386918 | MS.gene39338:CDS | 55.0% |
| ! | TCTCTGAGTTGGAGAGGCCT+TGG | + | chr8.2:81386898-81386917 | MS.gene39338:CDS | 55.0% |
| ! | TCTTGAAGGCGTGACTGTGC+CGG | + | chr8.2:81386826-81386845 | MS.gene39338:intron | 55.0% |
| ! | TGAGGAAGCACGGGAATGGA+AGG | + | chr8.2:81387600-81387619 | MS.gene39338:CDS | 55.0% |
| CAAGGCTGCCGTCTCTGAGT+TGG | + | chr8.2:81386887-81386906 | MS.gene39338:CDS | 60.0% | |
| GAGGAAGAGGGCTGAGCTCA+AGG | + | chr8.2:81386869-81386888 | MS.gene39338:intron | 60.0% | |
| GGCTTCTCAACCACCTCCCA+AGG | - | chr8.2:81386918-81386937 | None:intergenic | 60.0% | |
| TCCTTGGCCCACCACCCATT+CGG | - | chr8.2:81386743-81386762 | None:intergenic | 60.0% | |
| ! | CTGCCGTCTCTGAGTTGGAG+AGG | + | chr8.2:81386892-81386911 | MS.gene39338:CDS | 60.0% |
| ! | CTTGAAGGCGTGACTGTGCC+GGG | + | chr8.2:81386827-81386846 | MS.gene39338:intron | 60.0% |
| ! | GTGGCAGTGGAAGCGTATGC+AGG | + | chr8.2:81386785-81386804 | MS.gene39338:intron | 60.0% |
| ! | TGAGTTGGAGAGGCCTTGGG+AGG | + | chr8.2:81386902-81386921 | MS.gene39338:CDS | 60.0% |
| GTTGGAGAGGCCTTGGGAGG+TGG | + | chr8.2:81386905-81386924 | MS.gene39338:CDS | 65.0% | |
| ! | GTGGGGTGTCCAAGTGGCAG+TGG | + | chr8.2:81386772-81386791 | MS.gene39338:CDS | 65.0% |
| ! | TGCCACTTGGACACCCCACC+CGG | - | chr8.2:81386771-81386790 | None:intergenic | 65.0% |
| ! | TGGTGGGCCAAGGACGTACC+CGG | + | chr8.2:81386749-81386768 | MS.gene39338:CDS | 65.0% |
| !! | TCCGAATGGGTGGTGGGCCA+AGG | + | chr8.2:81386739-81386758 | MS.gene39338:CDS | 65.0% |
| ACCCCACCCGGGTACGTCCT+TGG | - | chr8.2:81386759-81386778 | None:intergenic | 70.0% | |
| AGGCGTGACTGTGCCGGGAG+CGG | + | chr8.2:81386832-81386851 | MS.gene39338:intron | 70.0% | |
| GCCAAGGACGTACCCGGGTG+GGG | + | chr8.2:81386755-81386774 | MS.gene39338:CDS | 70.0% | |
| GCCACTTGGACACCCCACCC+GGG | - | chr8.2:81386770-81386789 | None:intergenic | 70.0% | |
| GGCCAAGGACGTACCCGGGT+GGG | + | chr8.2:81386754-81386773 | MS.gene39338:CDS | 70.0% | |
| GGTGGGCCAAGGACGTACCC+GGG | + | chr8.2:81386750-81386769 | MS.gene39338:CDS | 70.0% | |
| ! | ACCCGGGTGGGGTGTCCAAG+TGG | + | chr8.2:81386766-81386785 | MS.gene39338:CDS | 70.0% |
| GGGCCAAGGACGTACCCGGG+TGG | + | chr8.2:81386753-81386772 | MS.gene39338:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 81386665 | 81388063 | 81386665 | ID=MS.gene39338 |
| chr8.2 | mRNA | 81386665 | 81388063 | 81386665 | ID=MS.gene39338.t1;Parent=MS.gene39338 |
| chr8.2 | exon | 81386665 | 81386798 | 81386665 | ID=MS.gene39338.t1.exon1;Parent=MS.gene39338.t1 |
| chr8.2 | CDS | 81386665 | 81386798 | 81386665 | ID=cds.MS.gene39338.t1;Parent=MS.gene39338.t1 |
| chr8.2 | exon | 81386872 | 81388063 | 81386872 | ID=MS.gene39338.t1.exon2;Parent=MS.gene39338.t1 |
| chr8.2 | CDS | 81386872 | 81388063 | 81386872 | ID=cds.MS.gene39338.t1;Parent=MS.gene39338.t1 |
| Gene Sequence |
| Protein sequence |
