AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene46957


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46957.t1 MTR_3g449770 95.728 515 18 1 13 527 1 511 0.0 1014
MS.gene46957.t1 MTR_1g069155 32.200 559 251 22 13 487 1 515 3.90e-51 183
MS.gene46957.t1 MTR_7g099540 45.532 235 96 6 274 480 202 432 5.80e-44 162
MS.gene46957.t1 MTR_7g099540 44.398 241 96 7 274 480 202 438 1.82e-41 155
MS.gene46957.t1 MTR_1g084980 58.333 144 53 4 265 403 402 543 5.98e-35 139
MS.gene46957.t1 MTR_7g111320 35.762 302 138 10 164 417 245 538 1.61e-28 120
MS.gene46957.t1 MTR_1g019240 58.000 100 38 2 303 400 65 162 5.70e-27 110
MS.gene46957.t1 MTR_7g110810 49.107 112 49 3 299 402 173 284 4.58e-23 101
MS.gene46957.t1 MTR_5g017040 68.571 70 20 1 334 403 114 181 4.93e-22 97.8
MS.gene46957.t1 MTR_1g084980 49.138 116 55 2 265 378 402 515 1.13e-17 86.7
MS.gene46957.t1 MTR_4g131160 57.143 63 27 0 327 389 198 260 2.96e-17 84.3
MS.gene46957.t1 MTR_4g131160 57.143 63 27 0 327 389 201 263 3.08e-17 84.3
MS.gene46957.t1 MTR_1g080890 53.968 63 29 0 327 389 195 257 1.27e-15 79.0
MS.gene46957.t1 MTR_5g005110 44.304 79 37 2 320 391 217 295 1.39e-13 72.4
MS.gene46957.t1 MTR_1g106470 37.500 88 45 2 312 389 178 265 2.27e-12 68.2
MS.gene46957.t1 MTR_1g017350 39.450 109 61 3 282 389 221 325 4.88e-12 68.2
MS.gene46957.t1 MTR_1g017350 39.450 109 61 3 282 389 221 325 5.07e-12 68.2
MS.gene46957.t1 MTR_1g017350 39.450 109 61 3 282 389 221 325 5.26e-12 68.2
MS.gene46957.t1 MTR_1g017350 39.450 109 61 3 282 389 221 325 5.34e-12 68.2
MS.gene46957.t1 MTR_3g498825 47.945 73 36 2 327 397 149 221 7.04e-12 67.0
MS.gene46957.t1 MTR_1g106480 54.000 50 21 1 342 389 86 135 8.51e-12 63.9
MS.gene46957.t1 MTR_3g103030 34.694 98 51 3 327 419 231 320 8.95e-12 66.6
MS.gene46957.t1 MTR_5g048860 51.562 64 30 1 327 389 367 430 9.14e-12 67.8
MS.gene46957.t1 MTR_7g053410 50.000 64 31 1 327 389 319 382 1.73e-11 67.0
MS.gene46957.t1 MTR_7g053410 50.000 64 31 1 327 389 319 382 1.89e-11 67.0
MS.gene46957.t1 MTR_3g116770 50.000 64 31 1 327 389 193 256 2.34e-11 66.2
MS.gene46957.t1 MTR_3g116770 50.000 64 31 1 327 389 193 256 2.38e-11 66.2
MS.gene46957.t1 MTR_1g018090 44.118 68 33 1 327 389 276 343 2.60e-11 65.9
MS.gene46957.t1 MTR_8g099880 35.000 120 70 5 327 444 147 260 2.84e-11 65.5
MS.gene46957.t1 MTR_8g012290 50.000 64 31 1 327 389 293 356 3.31e-11 65.9
MS.gene46957.t1 MTR_8g012290 50.000 64 31 1 327 389 293 356 3.36e-11 65.9
MS.gene46957.t1 MTR_1g059270 31.132 106 71 2 327 430 162 267 4.27e-11 64.7
MS.gene46957.t1 MTR_8g065740 50.000 64 31 1 327 389 307 370 5.13e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46957.t1 AT2G43010 35.388 503 228 18 20 510 6 423 1.68e-59 203
MS.gene46957.t1 AT2G43010 35.248 505 228 19 20 510 6 425 1.11e-57 198
MS.gene46957.t1 AT2G43010 35.248 505 228 19 20 510 13 432 1.79e-57 198
MS.gene46957.t1 AT2G43010 35.446 505 227 20 20 510 48 467 3.26e-57 198
MS.gene46957.t1 AT2G43010 35.368 475 212 17 20 484 6 395 2.30e-54 189
MS.gene46957.t1 AT2G20180 36.842 437 193 17 13 422 1 381 8.61e-45 164
MS.gene46957.t1 AT2G20180 36.842 437 193 17 13 422 1 381 8.61e-45 164
MS.gene46957.t1 AT2G20180 36.842 437 193 17 13 422 1 381 8.61e-45 164
MS.gene46957.t1 AT2G20180 36.842 437 193 17 13 422 1 381 8.61e-45 164
MS.gene46957.t1 AT3G59060 44.144 333 115 14 207 509 146 437 1.01e-44 164
MS.gene46957.t1 AT3G59060 44.144 333 115 14 207 509 146 437 1.01e-44 164
MS.gene46957.t1 AT3G59060 44.144 333 115 14 207 509 146 437 1.01e-44 164
MS.gene46957.t1 AT3G59060 44.411 331 115 14 207 509 146 435 2.61e-44 162
MS.gene46957.t1 AT2G20180 35.176 398 181 16 13 389 1 342 5.05e-39 145
MS.gene46957.t1 AT2G20180 38.352 352 147 13 86 422 14 310 9.53e-38 144
MS.gene46957.t1 AT2G20180 38.352 352 147 13 86 422 14 310 9.53e-38 144
MS.gene46957.t1 AT2G20180 38.352 352 147 13 86 422 14 310 9.53e-38 144
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT1G09530 33.945 436 193 23 31 404 18 420 5.76e-34 135
MS.gene46957.t1 AT4G28800 28.753 473 221 17 39 475 19 411 3.03e-28 117
MS.gene46957.t1 AT4G28800 28.541 473 216 18 39 475 31 417 2.51e-26 112
MS.gene46957.t1 AT5G67110 48.529 136 48 3 266 399 48 163 2.99e-26 106
MS.gene46957.t1 AT4G28790 28.993 407 217 15 32 420 18 370 4.30e-25 107
MS.gene46957.t1 AT4G28815 40.217 184 75 8 313 485 53 212 4.79e-25 103
MS.gene46957.t1 AT4G36930 73.611 72 17 1 331 400 197 268 6.38e-25 106
MS.gene46957.t1 AT4G28815 42.391 184 71 10 313 485 129 288 1.01e-24 105
MS.gene46957.t1 AT2G46970 41.379 174 81 7 266 426 133 298 3.15e-24 105
MS.gene46957.t1 AT2G46970 41.379 174 81 7 266 426 142 307 3.29e-24 105
MS.gene46957.t1 AT2G46970 41.520 171 79 7 269 426 167 329 4.31e-24 105
MS.gene46957.t1 AT4G00050 53.271 107 39 3 285 387 68 167 2.25e-22 97.8
MS.gene46957.t1 AT4G00050 53.271 107 39 3 285 387 170 269 5.90e-22 98.2
MS.gene46957.t1 AT4G00050 53.271 107 39 3 285 387 170 269 6.49e-22 98.2
MS.gene46957.t1 AT2G24260 58.730 63 26 0 327 389 37 99 1.13e-18 86.3
MS.gene46957.t1 AT4G28790 27.446 368 199 12 32 385 18 331 4.32e-18 86.3
MS.gene46957.t1 AT2G24260 58.730 63 26 0 327 389 140 202 5.29e-18 85.9
MS.gene46957.t1 AT5G58010 54.054 74 31 1 316 389 93 163 5.59e-18 85.1
MS.gene46957.t1 AT4G30980 57.143 63 27 0 327 389 132 194 1.31e-17 84.3
MS.gene46957.t1 AT4G30980 57.143 63 27 0 327 389 180 242 3.53e-17 83.6
MS.gene46957.t1 AT3G62090 49.474 95 45 3 320 412 160 253 8.00e-17 82.4
MS.gene46957.t1 AT3G62090 49.474 95 45 3 320 412 177 270 1.04e-16 82.4
MS.gene46957.t1 AT4G28811 36.992 246 123 6 260 486 295 527 1.05e-16 83.6
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 103 267 1.41e-14 75.5
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 154 318 1.59e-14 75.9
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 154 318 1.59e-14 75.9
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 154 318 1.59e-14 75.9
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 154 318 1.59e-14 75.9
MS.gene46957.t1 AT1G26260 33.333 165 92 5 272 418 132 296 1.99e-14 75.5
MS.gene46957.t1 AT1G68240 38.710 124 67 4 327 444 63 183 1.16e-13 70.1
MS.gene46957.t1 AT5G61270 46.078 102 53 2 299 399 135 235 2.43e-13 72.0
MS.gene46957.t1 AT5G61270 46.078 102 53 2 299 399 47 147 2.48e-13 70.9
MS.gene46957.t1 AT5G61270 46.078 102 53 2 299 399 47 147 2.48e-13 70.9
MS.gene46957.t1 AT4G33880 35.652 115 57 4 308 415 247 351 4.35e-13 71.2
MS.gene46957.t1 AT5G43175 40.789 76 40 1 319 389 126 201 4.94e-13 68.9
MS.gene46957.t1 AT1G68240 39.091 110 61 3 327 430 63 172 5.07e-13 67.8
MS.gene46957.t1 AT1G02340 36.667 120 52 3 293 412 113 208 6.05e-13 70.1
MS.gene46957.t1 AT1G02340 36.667 120 52 3 293 412 106 201 6.55e-13 69.7
MS.gene46957.t1 AT5G50915 29.358 218 100 8 250 427 53 256 1.34e-12 68.9
MS.gene46957.t1 AT5G50915 29.358 218 100 8 250 427 53 256 1.34e-12 68.9
MS.gene46957.t1 AT1G27740 36.449 107 59 3 303 403 148 251 1.62e-12 68.2
MS.gene46957.t1 AT2G14760 38.710 93 49 2 302 389 217 306 1.66e-12 68.9
MS.gene46957.t1 AT5G50915 29.279 222 95 9 250 427 53 256 2.09e-12 68.2
MS.gene46957.t1 AT5G50915 29.279 222 95 9 250 427 53 256 2.09e-12 68.2
MS.gene46957.t1 AT3G23690 34.028 144 86 4 251 389 117 256 5.61e-12 67.8
MS.gene46957.t1 AT1G68920 36.170 141 79 6 327 458 304 442 6.50e-12 68.2
MS.gene46957.t1 AT1G68920 36.170 141 79 6 327 458 305 443 6.63e-12 68.2
MS.gene46957.t1 AT1G68920 36.170 141 79 6 327 458 305 443 6.63e-12 68.2
MS.gene46957.t1 AT1G68920 36.170 141 79 6 327 458 305 443 6.63e-12 68.2
MS.gene46957.t1 AT2G18300 30.808 198 113 7 286 460 129 325 9.33e-12 67.0
MS.gene46957.t1 AT2G18300 30.808 198 113 7 286 460 129 325 1.17e-11 66.6
MS.gene46957.t1 AT2G14760 42.647 68 34 1 327 389 252 319 1.59e-11 66.2
MS.gene46957.t1 AT4G34530 48.438 64 32 1 327 389 174 237 1.93e-11 65.9
MS.gene46957.t1 AT3G07340 39.216 102 43 3 304 389 225 323 2.12e-11 66.6
MS.gene46957.t1 AT3G07340 39.216 102 43 3 304 389 225 323 2.54e-11 66.2
MS.gene46957.t1 AT5G67110 40.367 109 44 3 266 374 48 135 4.25e-11 61.6
MS.gene46957.t1 AT5G48560 50.000 64 31 1 327 389 303 366 4.97e-11 65.5
MS.gene46957.t1 AT5G48560 50.000 64 31 1 327 389 303 366 5.47e-11 65.5
MS.gene46957.t1 AT4G36540 36.697 109 60 3 289 389 99 206 7.13e-11 63.9
MS.gene46957.t1 AT4G36540 36.697 109 60 3 289 389 99 206 7.14e-11 63.9
MS.gene46957.t1 AT5G67110 37.500 136 41 4 266 399 48 141 7.98e-11 62.0
MS.gene46957.t1 AT2G18300 30.612 196 114 5 286 460 129 323 8.34e-11 63.9
MS.gene46957.t1 AT1G10120 48.438 64 32 1 327 389 208 271 8.41e-11 64.3
MS.gene46957.t1 AT1G10120 48.438 64 32 1 327 389 208 271 8.41e-11 64.3

Find 112 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGTTCCTGATTGGAATTT+TGG 0.193756 3.2:+37617913 MS.gene46957:CDS
TACTTCATCTTCTGGTGGTT+CGG 0.273371 3.2:+37618780 MS.gene46957:CDS
GAACTTGTTTCTTATTTGTT+TGG 0.281722 3.2:-37618141 None:intergenic
TGATGCTGTGGGTGGCAAAA+TGG 0.294348 3.2:+37620367 MS.gene46957:CDS
CATTGGTCCACTGCTATTGC+TGG 0.300560 3.2:-37620324 None:intergenic
TGTTCAAGTGGATCCTCAAT+AGG 0.303381 3.2:-37618271 None:intergenic
AGGCACCTAAAACAGGATTT+TGG 0.303664 3.2:-37619778 None:intergenic
TAAATCAGCCGTGAGGAAAA+AGG 0.304657 3.2:+37619002 MS.gene46957:CDS
ACATCATTTCTGACTTGTTC+AGG 0.332564 3.2:-37618700 None:intergenic
ATCACTTCAGTTACAACTTC+AGG 0.334793 3.2:+37619483 MS.gene46957:CDS
AAGGTGGAAGTTCAGATAAA+AGG 0.339660 3.2:-37618309 None:intergenic
GATGCAAAATCCTGCTCTTT+CGG 0.342576 3.2:+37619817 MS.gene46957:CDS
GGGTATCAAGCAACGGTGTT+TGG 0.343568 3.2:+37618659 MS.gene46957:CDS
ATGAACTTGTGGAGCTTCTA+TGG 0.349007 3.2:+37618092 MS.gene46957:CDS
CATCTTGATCCTGTTGGACT+TGG 0.357855 3.2:-37618630 None:intergenic
ACTTCATCTTCTGGTGGTTC+GGG 0.366507 3.2:+37618781 MS.gene46957:CDS
AAGATGATGAAACTGTTTCA+TGG 0.378684 3.2:+37618236 MS.gene46957:CDS
GTTGTTTCTTTGCAATGAAT+CGG 0.393694 3.2:-37618428 None:intergenic
GGCATCTCAGCGGTCAGGTT+CGG 0.395919 3.2:+37619023 MS.gene46957:CDS
ATGTTTGCTGTTCCACTCAT+TGG 0.397921 3.2:-37620341 None:intergenic
TGCTTACATCTTGATCCTGT+TGG 0.402600 3.2:-37618636 None:intergenic
GACGGATCCAGAGGCATTCT+CGG 0.403301 3.2:-37619716 None:intergenic
GTCATGACTTCTTGTAGATA+AGG 0.410497 3.2:-37618827 None:intergenic
GGTGCAAATAGGTACTGGTT+TGG 0.413855 3.2:+37617870 MS.gene46957:intron
TCAGCACTATATGTCACAAA+TGG 0.421098 3.2:+37619640 MS.gene46957:CDS
ATAGAAGCTCCACAAGTTCA+TGG 0.431688 3.2:-37618090 None:intergenic
TCTTATGCAAAATGCTTCTC+AGG 0.438287 3.2:+37619868 MS.gene46957:CDS
TTGAAAGACTCGACGTTACA+AGG 0.440966 3.2:-37618328 None:intergenic
ACAATTCCTCGGCATGAGAA+TGG 0.443028 3.2:+37618730 MS.gene46957:CDS
TGAACAACACCGTTCCTGAT+TGG 0.444912 3.2:+37617905 MS.gene46957:CDS
TTGTTTCTTTGCAATGAATC+GGG 0.448535 3.2:-37618427 None:intergenic
CGGAAGCAACCAAGTCCAAC+AGG 0.451058 3.2:+37618621 MS.gene46957:CDS
CCATATCTGTACATATTCAT+TGG 0.451704 3.2:-37620263 None:intergenic
GTAGATGCTAAAGTAACATT+GGG 0.457098 3.2:-37618502 None:intergenic
TGGCTCGTTAATGTCTGGTT+TGG 0.458380 3.2:-37619758 None:intergenic
TAGTTGAAGGCACCTAAAAC+AGG 0.459214 3.2:-37619785 None:intergenic
CTATATGTCACAAATGGGTA+TGG 0.459276 3.2:+37619646 MS.gene46957:CDS
GGAGCAATATGCTCGTTACA+TGG 0.460185 3.2:+37619838 MS.gene46957:CDS
TAATCAAAAGAAGCAACCTA+TGG 0.462757 3.2:+37617954 MS.gene46957:CDS
CAATTCCTCGGCATGAGAAT+GGG 0.468759 3.2:+37618731 MS.gene46957:CDS
AGAAAAGTTTACAACCTTGC+CGG 0.469128 3.2:-37618464 None:intergenic
GTTCAAGTGGATCCTCAATA+GGG 0.473250 3.2:-37618270 None:intergenic
AACAGGATCAAGATGTAAGC+AGG 0.473432 3.2:+37618638 MS.gene46957:CDS
TCGGCATGAGAATGGGAAAT+CGG 0.473920 3.2:+37618738 MS.gene46957:CDS
GATCCTCAATAGGGTATTGT+TGG 0.475150 3.2:-37618261 None:intergenic
TTCTGTTAGGTGATGTGGAT+GGG 0.477428 3.2:+37619584 MS.gene46957:intron
GAACATAATTCTTGTTCAAG+TGG 0.477770 3.2:-37618283 None:intergenic
TAGGTGATGTGGATGGGATC+TGG 0.479810 3.2:+37619590 MS.gene46957:intron
AACAACGATTTGTGTGGATC+CGG 0.480481 3.2:+37618445 MS.gene46957:CDS
ATAGGAAATTCCTGAACAAA+AGG 0.481459 3.2:-37618376 None:intergenic
GCAATTACCGAGAATGCCTC+TGG 0.483577 3.2:+37619709 MS.gene46957:CDS
TGTTCAGGAATTTCCTATGT+CGG 0.485624 3.2:+37618381 MS.gene46957:CDS
CCAATGAATATGTACAGATA+TGG 0.491789 3.2:+37620263 MS.gene46957:CDS
TGTAGATGCTAAAGTAACAT+TGG 0.495901 3.2:-37618503 None:intergenic
CATGACACCGATGATGCTAC+CGG 0.496261 3.2:+37619613 MS.gene46957:CDS
TTTCTGTTAGGTGATGTGGA+TGG 0.500303 3.2:+37619583 MS.gene46957:intron
GATGCTGTGGGTGGCAAAAT+GGG 0.501876 3.2:+37620368 MS.gene46957:CDS
GGTGGTTCGGGAAGTAGTCT+TGG 0.502929 3.2:+37618793 MS.gene46957:CDS
TCACTCCCAAAATTCCAATC+AGG 0.503469 3.2:-37617919 None:intergenic
AATCAAAAGAAGCAACCTAT+GGG 0.506530 3.2:+37617955 MS.gene46957:CDS
ATTTCTGACTTGTTCAGGCT+CGG 0.509459 3.2:-37618695 None:intergenic
GAATGGGAAATCGGAGATGT+TGG 0.520509 3.2:+37618747 MS.gene46957:CDS
ACTCATACCTCACAGTAGTA+AGG 0.524016 3.2:+37619218 MS.gene46957:CDS
CAGCACTATATGTCACAAAT+GGG 0.528954 3.2:+37619641 MS.gene46957:CDS
AGTGCATAATCTTTCAGAAA+GGG 0.530854 3.2:+37619068 MS.gene46957:CDS
GACATATAGTGCTGATATCC+CGG 0.534372 3.2:-37619632 None:intergenic
GTTACTTTAGCATCTACAAA+CGG 0.535195 3.2:+37618508 MS.gene46957:CDS
CAAAGCATCAATGTTAGAAG+AGG 0.538478 3.2:+37619444 MS.gene46957:CDS
TGTCTGGTTTGGTGTCTGAC+AGG 0.541123 3.2:-37619747 None:intergenic
GGCATTCTCGGTAATTGCAT+CGG 0.543563 3.2:-37619704 None:intergenic
TGAAACCTCGGAGCCGACAT+AGG 0.544656 3.2:-37618394 None:intergenic
TGATATCCCGGTAGCATCAT+CGG 0.547358 3.2:-37619620 None:intergenic
GCATATTGCTCCGAAAGAGC+AGG 0.550353 3.2:-37619827 None:intergenic
CAAAGAAACAACGATTTGTG+TGG 0.566041 3.2:+37618439 MS.gene46957:CDS
TGGTGTCTGACAGGAAGAAA+CGG 0.568009 3.2:-37619738 None:intergenic
ATTGGTCCACTGCTATTGCT+GGG 0.572900 3.2:-37620323 None:intergenic
CGATTTGTGTGGATCCGGCA+AGG 0.573793 3.2:+37618450 MS.gene46957:CDS
GTGGAGCTTCTATGGCAGAA+TGG 0.575038 3.2:+37618100 MS.gene46957:CDS
AGCGGTCAGGTTCGGCTCGT+AGG 0.585796 3.2:+37619031 MS.gene46957:CDS
CCAGAAGATGAAGTAAAAGC+AGG 0.586941 3.2:-37618772 None:intergenic
GATCCAACAATACCCTATTG+AGG 0.587994 3.2:+37618258 MS.gene46957:CDS
AAGTGCATAATCTTTCAGAA+AGG 0.591388 3.2:+37619067 MS.gene46957:CDS
TATATGTCACAAATGGGTAT+GGG 0.594345 3.2:+37619647 MS.gene46957:CDS
CCCAAAATTCCAATCAGGAA+CGG 0.594898 3.2:-37617914 None:intergenic
ATGACACCGATGATGCTACC+GGG 0.598634 3.2:+37619614 MS.gene46957:CDS
AGCAAACATTAATGATGCTG+TGG 0.601820 3.2:+37620355 MS.gene46957:CDS
GATTTCCCATTCTCATGCCG+AGG 0.602580 3.2:-37618736 None:intergenic
CAGGCTGGACCATGAACTTG+TGG 0.607340 3.2:+37618081 MS.gene46957:intron
GATGGATGTTGAAGATTCAG+TGG 0.609243 3.2:+37618864 MS.gene46957:CDS
GAGCAATATGCTCGTTACAT+GGG 0.614005 3.2:+37619839 MS.gene46957:CDS
GGAAATTCCTGAACAAAAGG+CGG 0.618190 3.2:-37618373 None:intergenic
ATGTTCAGAAGACAATTCCT+CGG 0.630703 3.2:+37618719 MS.gene46957:CDS
GAGTGTTCGACGATGACAGT+TGG 0.633825 3.2:+37618586 MS.gene46957:CDS
GGAACATGATGATGAAACCT+CGG 0.639628 3.2:-37618406 None:intergenic
ATATTGAACACACACCCCAT+AGG 0.642122 3.2:-37617970 None:intergenic
ACAGGATCAAGATGTAAGCA+GGG 0.649737 3.2:+37618639 MS.gene46957:CDS
AGATTCAGTGGAACAAAGCG+AGG 0.656069 3.2:+37618876 MS.gene46957:CDS
GTAAGCAGGGTATCAAGCAA+CGG 0.657240 3.2:+37618652 MS.gene46957:CDS
ACAGTTGGTTCGAGTTATTG+CGG 0.658618 3.2:+37618601 MS.gene46957:CDS
GAAGAAACGGACGGATCCAG+AGG 0.660505 3.2:-37619725 None:intergenic
AACATTAATGATGCTGTGGG+TGG 0.661408 3.2:+37620359 MS.gene46957:CDS
GTCTGACAGGAAGAAACGGA+CGG 0.668045 3.2:-37619734 None:intergenic
AATAGCAGTGGACCAATGAG+TGG 0.668226 3.2:+37620329 MS.gene46957:CDS
GGTCCACTGCTATTGCTGGG+TGG 0.669356 3.2:-37620320 None:intergenic
ATTCCACCCAGCAATAGCAG+TGG 0.670400 3.2:+37620317 MS.gene46957:CDS
AATTTCCTATGTCGGCTCCG+AGG 0.681257 3.2:+37618389 MS.gene46957:CDS
ATCAAAAGAAGCAACCTATG+GGG 0.695787 3.2:+37617956 MS.gene46957:CDS
GCAAACATTAATGATGCTGT+GGG 0.698935 3.2:+37620356 MS.gene46957:CDS
GATTATGCACTTCAGCAGCG+CGG 0.709911 3.2:-37619056 None:intergenic
TGACAAACCTTACTACTGTG+AGG 0.713524 3.2:-37619225 None:intergenic
AAAGACTCGACGTTACAAGG+TGG 0.729579 3.2:-37618325 None:intergenic
CAGAACTTAAATCAGCCGTG+AGG 0.748263 3.2:+37618995 MS.gene46957:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGGAATAAAAAATTTAA+AGG - chr3.2:37617697-37617716 None:intergenic 10.0%
!! AAAGGAATAAAAAATTTAAA+GGG - chr3.2:37617696-37617715 None:intergenic 10.0%
!! AGAATATCATTAATTTATAA+GGG - chr3.2:37620188-37620207 None:intergenic 10.0%
!! TATTTGATTATTCATTTAAA+TGG + chr3.2:37617750-37617769 MS.gene46957:intron 10.0%
!!! GATTTTAATATTGATAAAAA+AGG - chr3.2:37617714-37617733 None:intergenic 10.0%
!! GAATATCATTAATTTATAAG+GGG - chr3.2:37620187-37620206 None:intergenic 15.0%
!! GAGAATATCATTAATTTATA+AGG - chr3.2:37620189-37620208 None:intergenic 15.0%
!! TGAAAAACATCTAATTATAA+AGG - chr3.2:37618927-37618946 None:intergenic 15.0%
!!! AAACTAATTTTCTTTCATTT+TGG + chr3.2:37617849-37617868 MS.gene46957:intron 15.0%
!!! AAATTTTAGAGACAAAATTA+CGG + chr3.2:37618537-37618556 MS.gene46957:CDS 15.0%
!!! ATTTTTTTGATTTTTCTGTT+AGG + chr3.2:37619571-37619590 MS.gene46957:intron 15.0%
!! AACATTAAACACAACAAATT+AGG - chr3.2:37617481-37617500 None:intergenic 20.0%
!! AAGGTAAAATTAATTTCCAT+AGG - chr3.2:37620221-37620240 None:intergenic 20.0%
!! AGGTAAAATTAATTTCCATA+GGG - chr3.2:37620220-37620239 None:intergenic 20.0%
!! TAATATGAGAACAATATTAG+AGG - chr3.2:37620425-37620444 None:intergenic 20.0%
!!! AATTTTAGAGACAAAATTAC+GGG + chr3.2:37618538-37618557 MS.gene46957:CDS 20.0%
!!! ATTAATTTTACCTTGTATGT+TGG + chr3.2:37620227-37620246 MS.gene46957:intron 20.0%
!!! TATTTTATTCTTCTGCTTAA+TGG + chr3.2:37617784-37617803 MS.gene46957:intron 20.0%
! AAAAATTCTTTAGCAATGTG+AGG - chr3.2:37619557-37619576 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr3.2:37619991-37620010 None:intergenic 25.0%
! ACTGTTTACATGTAAGATAT+AGG - chr3.2:37620048-37620067 None:intergenic 25.0%
! TGCCTACAAAAAATAAAACA+CGG - chr3.2:37619256-37619275 None:intergenic 25.0%
!! AGACTTGATTTTTCCAATTA+TGG + chr3.2:37617575-37617594 MS.gene46957:intron 25.0%
!! ATTTTACGGTTTGTGTTAAT+AGG + chr3.2:37618969-37618988 MS.gene46957:intron 25.0%
!! GAACTTGTTTCTTATTTGTT+TGG - chr3.2:37618144-37618163 None:intergenic 25.0%
!! GACTTGATTTTTCCAATTAT+GGG + chr3.2:37617576-37617595 MS.gene46957:intron 25.0%
!! TAAGTTAGTTTATCCAAACA+GGG + chr3.2:37620144-37620163 MS.gene46957:intron 25.0%
!! TTAAGTTAGTTTATCCAAAC+AGG + chr3.2:37620143-37620162 MS.gene46957:intron 25.0%
!! TTCACTGAGTTATGATTTTA+CGG + chr3.2:37618955-37618974 MS.gene46957:intron 25.0%
!! TTTTAAATTTAGACCCTGTT+TGG - chr3.2:37620160-37620179 None:intergenic 25.0%
!! TTTTATGATCTTTCTCTTCT+GGG + chr3.2:37617517-37617536 MS.gene46957:intron 25.0%
!! TTTTTATGATCTTTCTCTTC+TGG + chr3.2:37617516-37617535 MS.gene46957:intron 25.0%
!!! AACCGTGTTTTATTTTTTGT+AGG + chr3.2:37619251-37619270 MS.gene46957:intron 25.0%
!!! ACAAAAAATTTGTTAGTAGC+AGG + chr3.2:37619303-37619322 MS.gene46957:intron 25.0%
!!! ATGCAAGAGATTATTTTGTA+TGG - chr3.2:37619524-37619543 None:intergenic 25.0%
!!! TGCTAGTGGTTAATTTTTTA+AGG + chr3.2:37619278-37619297 MS.gene46957:intron 25.0%
!!! TTACTTGTCATTTTGTTTAC+AGG + chr3.2:37620545-37620564 MS.gene46957:intron 25.0%
AAACTATCATGAAGAACTTG+TGG - chr3.2:37620015-37620034 None:intergenic 30.0%
AACCATGTGTTTAACATTAC+AGG + chr3.2:37618062-37618081 MS.gene46957:intron 30.0%
AAGATGATGAAACTGTTTCA+TGG + chr3.2:37618236-37618255 MS.gene46957:CDS 30.0%
AAGTGCATAATCTTTCAGAA+AGG + chr3.2:37619067-37619086 MS.gene46957:CDS 30.0%
AATCAAAAGAAGCAACCTAT+GGG + chr3.2:37617955-37617974 MS.gene46957:CDS 30.0%
AATTATGGGACTCTTGAAAT+TGG + chr3.2:37617590-37617609 MS.gene46957:intron 30.0%
AATTTCAAGAGTCCCATAAT+TGG - chr3.2:37617591-37617610 None:intergenic 30.0%
ACTCTTGAAATTGGAATTCT+TGG + chr3.2:37617599-37617618 MS.gene46957:intron 30.0%
AGACTATTTAGGAGATCTTA+TGG + chr3.2:37619945-37619964 MS.gene46957:intron 30.0%
AGTGCATAATCTTTCAGAAA+GGG + chr3.2:37619068-37619087 MS.gene46957:CDS 30.0%
ATAATCTTTCAGAAAGGGTA+AGG + chr3.2:37619073-37619092 MS.gene46957:intron 30.0%
ATAGGAAATTCCTGAACAAA+AGG - chr3.2:37618379-37618398 None:intergenic 30.0%
ATTAAATTGACGCGAATTCA+GGG - chr3.2:37619336-37619355 None:intergenic 30.0%
CCAATGAATATGTACAGATA+TGG + chr3.2:37620263-37620282 MS.gene46957:CDS 30.0%
CCATATCTGTACATATTCAT+TGG - chr3.2:37620266-37620285 None:intergenic 30.0%
GAACATAATTCTTGTTCAAG+TGG - chr3.2:37618286-37618305 None:intergenic 30.0%
GCGATTAAATCATACAACAT+GGG - chr3.2:37619382-37619401 None:intergenic 30.0%
GGAGTCAAATTCTACTTAAA+AGG + chr3.2:37617805-37617824 MS.gene46957:intron 30.0%
GTAGATGCTAAAGTAACATT+GGG - chr3.2:37618505-37618524 None:intergenic 30.0%
TAATCAAAAGAAGCAACCTA+TGG + chr3.2:37617954-37617973 MS.gene46957:CDS 30.0%
TAATCTTTCAGAAAGGGTAA+GGG + chr3.2:37619074-37619093 MS.gene46957:intron 30.0%
TATATGTCACAAATGGGTAT+GGG + chr3.2:37619647-37619666 MS.gene46957:CDS 30.0%
TGCGATTAAATCATACAACA+TGG - chr3.2:37619383-37619402 None:intergenic 30.0%
TGTAGATGCTAAAGTAACAT+TGG - chr3.2:37618506-37618525 None:intergenic 30.0%
TTAAGAGTTTAGATCATGTG+TGG - chr3.2:37617672-37617691 None:intergenic 30.0%
! GTTACTTTAGCATCTACAAA+CGG + chr3.2:37618508-37618527 MS.gene46957:CDS 30.0%
! TATTCTCATGTTTTACCCTA+TGG + chr3.2:37620202-37620221 MS.gene46957:intron 30.0%
! TTGACTATTTTGTACAGCTT+GGG - chr3.2:37620291-37620310 None:intergenic 30.0%
! TTGTTTCTTTGCAATGAATC+GGG - chr3.2:37618430-37618449 None:intergenic 30.0%
! TTTGACTATTTTGTACAGCT+TGG - chr3.2:37620292-37620311 None:intergenic 30.0%
!! GTTGTTTCTTTGCAATGAAT+CGG - chr3.2:37618431-37618450 None:intergenic 30.0%
!! TCTTTCATTTTGGTGCAAAT+AGG + chr3.2:37617859-37617878 MS.gene46957:intron 30.0%
!! TTATTGGTTTATTGATGCAG+AGG + chr3.2:37619154-37619173 MS.gene46957:intron 30.0%
AAAATGCTTCTCAGGTACTT+AGG + chr3.2:37619876-37619895 MS.gene46957:intron 35.0%
AAACACCTGAGAGACTATTT+AGG + chr3.2:37619934-37619953 MS.gene46957:intron 35.0%
AAGGTGGAAGTTCAGATAAA+AGG - chr3.2:37618312-37618331 None:intergenic 35.0%
AGAAAAGTTTACAACCTTGC+CGG - chr3.2:37618467-37618486 None:intergenic 35.0%
AGCAAACATTAATGATGCTG+TGG + chr3.2:37620355-37620374 MS.gene46957:CDS 35.0%
AGCCTGTAATGTTAAACACA+TGG - chr3.2:37618067-37618086 None:intergenic 35.0%
ATCAAAAGAAGCAACCTATG+GGG + chr3.2:37617956-37617975 MS.gene46957:CDS 35.0%
ATCACTTCAGTTACAACTTC+AGG + chr3.2:37619483-37619502 MS.gene46957:CDS 35.0%
ATGTGTTTAACATTACAGGC+TGG + chr3.2:37618066-37618085 MS.gene46957:intron 35.0%
ATGTTCAGAAGACAATTCCT+CGG + chr3.2:37618719-37618738 MS.gene46957:CDS 35.0%
CAAAATAGTGCCAACATACA+AGG - chr3.2:37620240-37620259 None:intergenic 35.0%
CAAAGAAACAACGATTTGTG+TGG + chr3.2:37618439-37618458 MS.gene46957:CDS 35.0%
CAAGAAGTCATGACAAAAAG+AGG + chr3.2:37618836-37618855 MS.gene46957:CDS 35.0%
CAGCACTATATGTCACAAAT+GGG + chr3.2:37619641-37619660 MS.gene46957:CDS 35.0%
CTATATGTCACAAATGGGTA+TGG + chr3.2:37619646-37619665 MS.gene46957:CDS 35.0%
GATTAAATTGACGCGAATTC+AGG - chr3.2:37619337-37619356 None:intergenic 35.0%
GCAAACATTAATGATGCTGT+GGG + chr3.2:37620356-37620375 MS.gene46957:CDS 35.0%
GTCATGACTTCTTGTAGATA+AGG - chr3.2:37618830-37618849 None:intergenic 35.0%
GTTGTATGATTTAATCGCAG+TGG + chr3.2:37619384-37619403 MS.gene46957:intron 35.0%
TCAGCACTATATGTCACAAA+TGG + chr3.2:37619640-37619659 MS.gene46957:CDS 35.0%
TCTTATGCAAAATGCTTCTC+AGG + chr3.2:37619868-37619887 MS.gene46957:CDS 35.0%
TGACAAAAAGAGGAAAGTGA+TGG + chr3.2:37618846-37618865 MS.gene46957:CDS 35.0%
TGTTCAGGAATTTCCTATGT+CGG + chr3.2:37618381-37618400 MS.gene46957:CDS 35.0%
! CAAAGCATCAATGTTAGAAG+AGG + chr3.2:37619444-37619463 MS.gene46957:CDS 35.0%
! CAGGATTTTGCATCTGATTT+TGG - chr3.2:37619811-37619830 None:intergenic 35.0%
! GACAATAGAGAAGTATGTGT+TGG - chr3.2:37620398-37620417 None:intergenic 35.0%
! GATTTTTCTGTTAGGTGATG+TGG + chr3.2:37619579-37619598 MS.gene46957:intron 35.0%
! TCAGGTACTTAGGATTTGTT+TGG + chr3.2:37619886-37619905 MS.gene46957:intron 35.0%
! TGACTATTTTGTACAGCTTG+GGG - chr3.2:37620290-37620309 None:intergenic 35.0%
! TTTTTGTAGGCAATTGCTAG+TGG + chr3.2:37619264-37619283 MS.gene46957:intron 35.0%
!! AATTGCATCGGATTTTGAAG+TGG - chr3.2:37619695-37619714 None:intergenic 35.0%
!! ACATCATTTCTGACTTGTTC+AGG - chr3.2:37618703-37618722 None:intergenic 35.0%
!! ATTTTGGTGCAAATAGGTAC+TGG + chr3.2:37617865-37617884 MS.gene46957:intron 35.0%
!! CATCTGATTTTGGTAGTTGA+AGG - chr3.2:37619801-37619820 None:intergenic 35.0%
!! TCGCTTACAAGAAGTGTTAT+TGG + chr3.2:37619138-37619157 MS.gene46957:intron 35.0%
AACAACGATTTGTGTGGATC+CGG + chr3.2:37618445-37618464 MS.gene46957:CDS 40.0%
AACAGGATCAAGATGTAAGC+AGG + chr3.2:37618638-37618657 MS.gene46957:CDS 40.0%
AACATTAATGATGCTGTGGG+TGG + chr3.2:37620359-37620378 MS.gene46957:CDS 40.0%
ACAGGATCAAGATGTAAGCA+GGG + chr3.2:37618639-37618658 MS.gene46957:CDS 40.0%
ACTCATACCTCACAGTAGTA+AGG + chr3.2:37619218-37619237 MS.gene46957:CDS 40.0%
AGGTAAAAAGATAGAGTGCG+CGG - chr3.2:37618907-37618926 None:intergenic 40.0%
ATAGAAGCTCCACAAGTTCA+TGG - chr3.2:37618093-37618112 None:intergenic 40.0%
ATATTGAACACACACCCCAT+AGG - chr3.2:37617973-37617992 None:intergenic 40.0%
ATGAACTTGTGGAGCTTCTA+TGG + chr3.2:37618092-37618111 MS.gene46957:CDS 40.0%
CCAGAAGATGAAGTAAAAGC+AGG - chr3.2:37618775-37618794 None:intergenic 40.0%
CCCAAAATTCCAATCAGGAA+CGG - chr3.2:37617917-37617936 None:intergenic 40.0%
GAGCAATATGCTCGTTACAT+GGG + chr3.2:37619839-37619858 MS.gene46957:CDS 40.0%
GATCCAACAATACCCTATTG+AGG + chr3.2:37618258-37618277 MS.gene46957:CDS 40.0%
GATCTCCTAAATAGTCTCTC+AGG - chr3.2:37619942-37619961 None:intergenic 40.0%
GATGCAAAATCCTGCTCTTT+CGG + chr3.2:37619817-37619836 MS.gene46957:CDS 40.0%
GATGGATGTTGAAGATTCAG+TGG + chr3.2:37618864-37618883 MS.gene46957:CDS 40.0%
GGAAATTCCTGAACAAAAGG+CGG - chr3.2:37618376-37618395 None:intergenic 40.0%
GTTCAAGTGGATCCTCAATA+GGG - chr3.2:37618273-37618292 None:intergenic 40.0%
TAAATCAGCCGTGAGGAAAA+AGG + chr3.2:37619002-37619021 MS.gene46957:CDS 40.0%
TACTTCATCTTCTGGTGGTT+CGG + chr3.2:37618780-37618799 MS.gene46957:CDS 40.0%
TCACTCCCAAAATTCCAATC+AGG - chr3.2:37617922-37617941 None:intergenic 40.0%
TGACAAACCTTACTACTGTG+AGG - chr3.2:37619228-37619247 None:intergenic 40.0%
TGCTTACATCTTGATCCTGT+TGG - chr3.2:37618639-37618658 None:intergenic 40.0%
TGTTCAAGTGGATCCTCAAT+AGG - chr3.2:37618274-37618293 None:intergenic 40.0%
TTCTGTTAGGTGATGTGGAT+GGG + chr3.2:37619584-37619603 MS.gene46957:intron 40.0%
TTGAAAGACTCGACGTTACA+AGG - chr3.2:37618331-37618350 None:intergenic 40.0%
TTTCTGTTAGGTGATGTGGA+TGG + chr3.2:37619583-37619602 MS.gene46957:intron 40.0%
! ACCGTTCCTGATTGGAATTT+TGG + chr3.2:37617913-37617932 MS.gene46957:CDS 40.0%
! ACGAGCCAAAATCCTGTTTT+AGG + chr3.2:37619773-37619792 MS.gene46957:CDS 40.0%
! AGGCACCTAAAACAGGATTT+TGG - chr3.2:37619781-37619800 None:intergenic 40.0%
! CCGTTCCTGATTGGAATTTT+GGG + chr3.2:37617914-37617933 MS.gene46957:CDS 40.0%
! GCTTTTACTTCATCTTCTGG+TGG + chr3.2:37618775-37618794 MS.gene46957:CDS 40.0%
! GGAACATGATGATGAAACCT+CGG - chr3.2:37618409-37618428 None:intergenic 40.0%
! TACAAAACCGCCTTTTGTTC+AGG + chr3.2:37618366-37618385 MS.gene46957:CDS 40.0%
!! AAAGGCGGTTTTGTATTCGT+CGG - chr3.2:37618361-37618380 None:intergenic 40.0%
!! ACAGTTGGTTCGAGTTATTG+CGG + chr3.2:37618601-37618620 MS.gene46957:CDS 40.0%
!! ATGTTTGCTGTTCCACTCAT+TGG - chr3.2:37620344-37620363 None:intergenic 40.0%
!! ATTTCTGACTTGTTCAGGCT+CGG - chr3.2:37618698-37618717 None:intergenic 40.0%
!! CCTGCTTTTACTTCATCTTC+TGG + chr3.2:37618772-37618791 MS.gene46957:CDS 40.0%
!! GACATATAGTGCTGATATCC+CGG - chr3.2:37619635-37619654 None:intergenic 40.0%
!! GATCCTCAATAGGGTATTGT+TGG - chr3.2:37618264-37618283 None:intergenic 40.0%
!! TAGTTGAAGGCACCTAAAAC+AGG - chr3.2:37619788-37619807 None:intergenic 40.0%
!!! GATTTTGGCTCGTTAATGTC+TGG - chr3.2:37619766-37619785 None:intergenic 40.0%
!!! TTTTGAAGTGGAGGAAACGA+AGG - chr3.2:37619683-37619702 None:intergenic 40.0%
AAAGACTCGACGTTACAAGG+TGG - chr3.2:37618328-37618347 None:intergenic 45.0%
AATAGCAGTGGACCAATGAG+TGG + chr3.2:37620329-37620348 MS.gene46957:CDS 45.0%
ACAATTCCTCGGCATGAGAA+TGG + chr3.2:37618730-37618749 MS.gene46957:CDS 45.0%
ACTTCATCTTCTGGTGGTTC+GGG + chr3.2:37618781-37618800 MS.gene46957:CDS 45.0%
AGATTCAGTGGAACAAAGCG+AGG + chr3.2:37618876-37618895 MS.gene46957:CDS 45.0%
ATTGGTCCACTGCTATTGCT+GGG - chr3.2:37620326-37620345 None:intergenic 45.0%
CAATTCCTCGGCATGAGAAT+GGG + chr3.2:37618731-37618750 MS.gene46957:CDS 45.0%
CAGAACTTAAATCAGCCGTG+AGG + chr3.2:37618995-37619014 MS.gene46957:CDS 45.0%
CATCTTGATCCTGTTGGACT+TGG - chr3.2:37618633-37618652 None:intergenic 45.0%
GAATGGGAAATCGGAGATGT+TGG + chr3.2:37618747-37618766 MS.gene46957:CDS 45.0%
GGAGCAATATGCTCGTTACA+TGG + chr3.2:37619838-37619857 MS.gene46957:CDS 45.0%
GGCATTCTCGGTAATTGCAT+CGG - chr3.2:37619707-37619726 None:intergenic 45.0%
TCGGCATGAGAATGGGAAAT+CGG + chr3.2:37618738-37618757 MS.gene46957:CDS 45.0%
TGAACAACACCGTTCCTGAT+TGG + chr3.2:37617905-37617924 MS.gene46957:CDS 45.0%
TGATATCCCGGTAGCATCAT+CGG - chr3.2:37619623-37619642 None:intergenic 45.0%
TGGCTCGTTAATGTCTGGTT+TGG - chr3.2:37619761-37619780 None:intergenic 45.0%
TGGTGTCTGACAGGAAGAAA+CGG - chr3.2:37619741-37619760 None:intergenic 45.0%
! CTGAGATGCCTTTTTCCTCA+CGG - chr3.2:37619013-37619032 None:intergenic 45.0%
! GTAAGCAGGGTATCAAGCAA+CGG + chr3.2:37618652-37618671 MS.gene46957:CDS 45.0%
!! GGTGCAAATAGGTACTGGTT+TGG + chr3.2:37617870-37617889 MS.gene46957:intron 45.0%
!! TGAGGAAAAAGGCATCTCAG+CGG + chr3.2:37619013-37619032 MS.gene46957:CDS 45.0%
!!! TGCATCGGATTTTGAAGTGG+AGG - chr3.2:37619692-37619711 None:intergenic 45.0%
ATGACACCGATGATGCTACC+GGG + chr3.2:37619614-37619633 MS.gene46957:CDS 50.0%
ATTCCACCCAGCAATAGCAG+TGG + chr3.2:37620317-37620336 MS.gene46957:CDS 50.0%
CATGACACCGATGATGCTAC+CGG + chr3.2:37619613-37619632 MS.gene46957:CDS 50.0%
CATTGGTCCACTGCTATTGC+TGG - chr3.2:37620327-37620346 None:intergenic 50.0%
GAGTGTTCGACGATGACAGT+TGG + chr3.2:37618586-37618605 MS.gene46957:CDS 50.0%
GATGCTGTGGGTGGCAAAAT+GGG + chr3.2:37620368-37620387 MS.gene46957:CDS 50.0%
GATTATGCACTTCAGCAGCG+CGG - chr3.2:37619059-37619078 None:intergenic 50.0%
GATTTCCCATTCTCATGCCG+AGG - chr3.2:37618739-37618758 None:intergenic 50.0%
GCAATTACCGAGAATGCCTC+TGG + chr3.2:37619709-37619728 MS.gene46957:CDS 50.0%
GCATATTGCTCCGAAAGAGC+AGG - chr3.2:37619830-37619849 None:intergenic 50.0%
GGGTATCAAGCAACGGTGTT+TGG + chr3.2:37618659-37618678 MS.gene46957:CDS 50.0%
GTCTGACAGGAAGAAACGGA+CGG - chr3.2:37619737-37619756 None:intergenic 50.0%
GTGGAGCTTCTATGGCAGAA+TGG + chr3.2:37618100-37618119 MS.gene46957:CDS 50.0%
TAGGTGATGTGGATGGGATC+TGG + chr3.2:37619590-37619609 MS.gene46957:intron 50.0%
TGATGCTGTGGGTGGCAAAA+TGG + chr3.2:37620367-37620386 MS.gene46957:CDS 50.0%
!! AAAAAGGCATCTCAGCGGTC+AGG + chr3.2:37619018-37619037 MS.gene46957:CDS 50.0%
!! AATTTCCTATGTCGGCTCCG+AGG + chr3.2:37618389-37618408 MS.gene46957:CDS 50.0%
!! TGTCTGGTTTGGTGTCTGAC+AGG - chr3.2:37619750-37619769 None:intergenic 50.0%
CAGGCTGGACCATGAACTTG+TGG + chr3.2:37618081-37618100 MS.gene46957:intron 55.0%
CGATTTGTGTGGATCCGGCA+AGG + chr3.2:37618450-37618469 MS.gene46957:CDS 55.0%
CGGAAGCAACCAAGTCCAAC+AGG + chr3.2:37618621-37618640 MS.gene46957:CDS 55.0%
CTGTGGGTGGCAAAATGGGT+AGG + chr3.2:37620372-37620391 MS.gene46957:intron 55.0%
GAAGAAACGGACGGATCCAG+AGG - chr3.2:37619728-37619747 None:intergenic 55.0%
TGAAACCTCGGAGCCGACAT+AGG - chr3.2:37618397-37618416 None:intergenic 55.0%
! GGTGGTTCGGGAAGTAGTCT+TGG + chr3.2:37618793-37618812 MS.gene46957:CDS 55.0%
!! GACGGATCCAGAGGCATTCT+CGG - chr3.2:37619719-37619738 None:intergenic 55.0%
GGCATCTCAGCGGTCAGGTT+CGG + chr3.2:37619023-37619042 MS.gene46957:CDS 60.0%
GGTCCACTGCTATTGCTGGG+TGG - chr3.2:37620323-37620342 None:intergenic 60.0%
! AGCGGTCAGGTTCGGCTCGT+AGG + chr3.2:37619031-37619050 MS.gene46957:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 37617441 37620571 37617441 ID=MS.gene46957
chr3.2 mRNA 37617441 37620571 37617441 ID=MS.gene46957.t1;Parent=MS.gene46957
chr3.2 exon 37617441 37617453 37617441 ID=MS.gene46957.t1.exon1;Parent=MS.gene46957.t1
chr3.2 CDS 37617441 37617453 37617441 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37617881 37617977 37617881 ID=MS.gene46957.t1.exon2;Parent=MS.gene46957.t1
chr3.2 CDS 37617881 37617977 37617881 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37618084 37618897 37618084 ID=MS.gene46957.t1.exon3;Parent=MS.gene46957.t1
chr3.2 CDS 37618084 37618897 37618084 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37618991 37619089 37618991 ID=MS.gene46957.t1.exon4;Parent=MS.gene46957.t1
chr3.2 CDS 37618991 37619089 37618991 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37619174 37619239 37619174 ID=MS.gene46957.t1.exon5;Parent=MS.gene46957.t1
chr3.2 CDS 37619174 37619239 37619174 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37619439 37619504 37619439 ID=MS.gene46957.t1.exon6;Parent=MS.gene46957.t1
chr3.2 CDS 37619439 37619504 37619439 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37619593 37619889 37619593 ID=MS.gene46957.t1.exon7;Parent=MS.gene46957.t1
chr3.2 CDS 37619593 37619889 37619593 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37620263 37620389 37620263 ID=MS.gene46957.t1.exon8;Parent=MS.gene46957.t1
chr3.2 CDS 37620263 37620389 37620263 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
chr3.2 exon 37620567 37620571 37620567 ID=MS.gene46957.t1.exon9;Parent=MS.gene46957.t1
chr3.2 CDS 37620567 37620571 37620567 ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1
Gene Sequence

>MS.gene46957

ATGCAATCTTTATGTAAGATTTCTGTCTCAAATTTTGCCTAATTTGTTGTGTTTAATGTTTTGTTATAAAATTTATTTTTATGATCTTTCTCTTCTGGGCTTATGAATGTACATGTACTTTTCAATAGTAATTGAGACTTGATTTTTCCAATTATGGGACTCTTGAAATTGGAATTCTTGGTTCATAATAAAAAATAAAAAAACTTTAGTTTCATTTCATAGTAAATTCCACACATGATCTAAACTCTTAAACCCTTTAAATTTTTTATTCCTTTTTTATCAATATTAAAATCTGTTTAATCTCATGCATATTTGATTATTCATTTAAATGGTCTTTACATAATATTTTATTCTTCTGCTTAATGGAGTCAAATTCTACTTAAAAGGATCTTCATTTTTCTATTCAATAAACTAATTTTCTTTCATTTTGGTGCAAATAGGTACTGGTTTGGTTCAGTTAGCGATGAACAACACCGTTCCTGATTGGAATTTTGGGAGTGATAGTTTTGTCACTAATCAAAAGAAGCAACCTATGGGGTGTGTGTTCAATATTTCATTATCAAAGCATAAAAATATTATTGTCAAAATTAAATTTGATTAAATTATGAATAATTAATTATTAACCATGTGTTTAACATTACAGGCTGGACCATGAACTTGTGGAGCTTCTATGGCAGAATGGTCATGTAGTATTGAATAGCCAAACAAATAAGAAACAAGTTCTGAATTCAAATACAATCAATTCAAGACAAGTTCATAAGAATCTTCAATCAACAACTTTAAGCAACTTGATTCAAGATGATGAAACTGTTTCATGGATCCAACAATACCCTATTGAGGATCCACTTGAACAAGAATTATGTTCAAACCTTTTATCTGAACTTCCACCTTGTAACGTCGAGTCTTTCAATTCGCAACCGACGAATACAAAACCGCCTTTTGTTCAGGAATTTCCTATGTCGGCTCCGAGGTTTCATCATCATGTTCCCGATTCATTGCAAAGAAACAACGATTTGTGTGGATCCGGCAAGGTTGTAAACTTTTCTCACTTTTCAAGACTTCCCAATGTTACTTTAGCATCTACAAACGGCGATGCAAATTTTAGAGACAAAATTACGGGTAATCTGTCACAATGTGATGTTAGAGAGTGTTCGACGATGACAGTTGGTTCGAGTTATTGCGGAAGCAACCAAGTCCAACAGGATCAAGATGTAAGCAGGGTATCAAGCAACGGTGTTTGGACTAATTTATCGACCGAGCCTGAACAAGTCAGAAATGATGTTCAGAAGACAATTCCTCGGCATGAGAATGGGAAATCGGAGATGTTGGAACCTGCTTTTACTTCATCTTCTGGTGGTTCGGGAAGTAGTCTTGGAAAAACTTGTTCCTTATCTACAAGAAGTCATGACAAAAAGAGGAAAGTGATGGATGTTGAAGATTCAGTGGAACAAAGCGAGGTAAAGCCGCGCACTCTATCTTTTTACCTTTATAATTAGATGTTTTTCATTCATTGATTCACTGAGTTATGATTTTACGGTTTGTGTTAATAGGATACAGAACTTAAATCAGCCGTGAGGAAAAAGGCATCTCAGCGGTCAGGTTCGGCTCGTAGGAACCGCGCTGCTGAAGTGCATAATCTTTCAGAAAGGGTAAGGGTTTGACACTTCTCTAGATAGACTGAAGTTTTTGAAATTTTTTCGCTTACAAGAAGTGTTATTGGTTTATTGATGCAGAGGCGAAGAGATAGAATTAATGAGAAGATGAAAGCATTACAACAACTCATACCTCACAGTAGTAAGGTTTGTCATCAAACCGTGTTTTATTTTTTGTAGGCAATTGCTAGTGGTTAATTTTTTAAGGCTACAAAAAATTTGTTAGTAGCAGGTATTGAACCCTGAATTCGCGTCAATTTAATCGTGTATAGAAAACGATCGATTTCCCATGTTGTATGATTTAATCGCAGTGGTTTAAAAACTGAGTAAGTGATATATATTGCAGACAGACAAAGCATCAATGTTAGAAGAGGCAATTGAATACTTGAAATCACTTCAGTTACAACTTCAGGTATATATATTATGTGCCATACAAAATAATCTCTTGCATATGAAAATTGCCTCACATTGCTAAAGAATTTTTTTGATTTTTCTGTTAGGTGATGTGGATGGGATCTGGCATGACACCGATGATGCTACCGGGATATCAGCACTATATGTCACAAATGGGTATGGGAATGACTACACCTTCGTTTCCTCCACTTCAAAATCCGATGCAATTACCGAGAATGCCTCTGGATCCGTCCGTTTCTTCCTGTCAGACACCAAACCAGACATTAACGAGCCAAAATCCTGTTTTAGGTGCCTTCAACTACCAAAATCAGATGCAAAATCCTGCTCTTTCGGAGCAATATGCTCGTTACATGGGCTATCATCTTATGCAAAATGCTTCTCAGGTACTTAGGATTTGTTTGGATATACTTCTTTTTTCTACTGACATAAACACCTGAGAGACTATTTAGGAGATCTTATGGCTACAACTTATATTACATGTCCATAAGTTGTTTTCAGCTTATTTCCACAAGTTCTTCATGATAGTTTATAAAAACAGCCTATATCTTACATGTAAACAGTTTTACTTAAATTTTCTCTTTTTGTTACAAAAATAACTTACACATAAACACATACTAGTATATAATAACTATTTAGTTAAGTTAGTTTATCCAAACAGGGTCTAAATTTAAAATGCTCCCCTTATAAATTAATGATATTCTCATGTTTTACCCTATGGAAATTAATTTTACCTTGTATGTTGGCACTATTTTGTAGCCAATGAATATGTACAGATATGGTCCCCAAGCTGTACAAAATAGTCAAACAATGATTCCACCCAGCAATAGCAGTGGACCAATGAGTGGAACAGCAAACATTAATGATGCTGTGGGTGGCAAAATGGGTAGGCCAACACATACTTCTCTATTGTCATAGCCTCTAATATTGTTCTCATATTATATGCTATACATAGACATATCATTAAAAGTTTCATGATTTTTTTTTTCATTTTCTATTTTATTTATTATGTACTTGTATATTTAAAACTTACTAAAAATTTTACTTGTCATTTTGTTTACAGGTTAA

Protein sequence

>MS.gene46957.t1

MQSLCTGLVQLAMNNTVPDWNFGSDSFVTNQKKQPMGLDHELVELLWQNGHVVLNSQTNKKQVLNSNTINSRQVHKNLQSTTLSNLIQDDETVSWIQQYPIEDPLEQELCSNLLSELPPCNVESFNSQPTNTKPPFVQEFPMSAPRFHHHVPDSLQRNNDLCGSGKVVNFSHFSRLPNVTLASTNGDANFRDKITGNLSQCDVRECSTMTVGSSYCGSNQVQQDQDVSRVSSNGVWTNLSTEPEQVRNDVQKTIPRHENGKSEMLEPAFTSSSGGSGSSLGKTCSLSTRSHDKKRKVMDVEDSVEQSEDTELKSAVRKKASQRSGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMTPMMLPGYQHYMSQMGMGMTTPSFPPLQNPMQLPRMPLDPSVSSCQTPNQTLTSQNPVLGAFNYQNQMQNPALSEQYARYMGYHLMQNASQPMNMYRYGPQAVQNSQTMIPPSNSSGPMSGTANINDAVGGKMG