Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46957.t1 | XP_013459610.1 | 95.7 | 515 | 18 | 1 | 13 | 527 | 1 | 511 | 2.20E-273 | 951 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46957.t1 | Q8W2F3 | 35.3 | 510 | 221 | 21 | 20 | 510 | 6 | 425 | 9.9e-44 | 179.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46957.t1 | A0A072UW39 | 95.7 | 515 | 18 | 1 | 13 | 527 | 1 | 511 | 1.6e-273 | 951.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene46957.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049356 | MS.gene46957 | 0.81672 | 4.78E-52 | -1.69E-46 |
MS.gene049661 | MS.gene46957 | 0.81043 | 1.16E-50 | -1.69E-46 |
MS.gene049662 | MS.gene46957 | 0.803152 | 4.00E-49 | -1.69E-46 |
MS.gene050122 | MS.gene46957 | 0.8218 | 3.33E-53 | -1.69E-46 |
MS.gene050301 | MS.gene46957 | 0.823642 | 1.24E-53 | -1.69E-46 |
MS.gene050670 | MS.gene46957 | 0.823187 | 1.59E-53 | -1.69E-46 |
MS.gene051860 | MS.gene46957 | 0.800931 | 1.14E-48 | -1.69E-46 |
MS.gene052253 | MS.gene46957 | 0.842937 | 1.91E-58 | -1.69E-46 |
MS.gene052421 | MS.gene46957 | 0.806796 | 6.91E-50 | -1.69E-46 |
MS.gene052485 | MS.gene46957 | 0.81483 | 1.26E-51 | -1.69E-46 |
MS.gene053813 | MS.gene46957 | 0.819841 | 9.40E-53 | -1.69E-46 |
MS.gene054010 | MS.gene46957 | 0.830738 | 2.48E-55 | -1.69E-46 |
MS.gene054011 | MS.gene46957 | 0.841882 | 3.63E-58 | -1.69E-46 |
MS.gene054012 | MS.gene46957 | 0.835446 | 1.67E-56 | -1.69E-46 |
MS.gene054013 | MS.gene46957 | 0.830737 | 2.48E-55 | -1.69E-46 |
MS.gene054183 | MS.gene46957 | 0.83985 | 1.24E-57 | -1.69E-46 |
MS.gene054918 | MS.gene46957 | 0.841962 | 3.46E-58 | -1.69E-46 |
MS.gene055116 | MS.gene46957 | 0.862504 | 4.84E-64 | -1.69E-46 |
MS.gene055604 | MS.gene46957 | 0.825146 | 5.50E-54 | -1.69E-46 |
MS.gene055909 | MS.gene46957 | 0.828278 | 9.83E-55 | -1.69E-46 |
MS.gene055911 | MS.gene46957 | 0.833313 | 5.73E-56 | -1.69E-46 |
MS.gene056191 | MS.gene46957 | 0.810536 | 1.10E-50 | -1.69E-46 |
MS.gene056407 | MS.gene46957 | 0.8124 | 4.32E-51 | -1.69E-46 |
MS.gene056422 | MS.gene46957 | 0.808248 | 3.40E-50 | -1.69E-46 |
MS.gene056511 | MS.gene46957 | 0.804358 | 2.24E-49 | -1.69E-46 |
MS.gene056514 | MS.gene46957 | 0.804201 | 2.42E-49 | -1.69E-46 |
MS.gene05663 | MS.gene46957 | 0.817 | 4.14E-52 | -1.69E-46 |
MS.gene056902 | MS.gene46957 | 0.831154 | 1.96E-55 | -1.69E-46 |
MS.gene05702 | MS.gene46957 | 0.829812 | 4.17E-55 | -1.69E-46 |
MS.gene057396 | MS.gene46957 | 0.803209 | 3.89E-49 | -1.69E-46 |
MS.gene057749 | MS.gene46957 | 0.84284 | 2.02E-58 | -1.69E-46 |
MS.gene057779 | MS.gene46957 | 0.804831 | 1.79E-49 | -1.69E-46 |
MS.gene057823 | MS.gene46957 | 0.834022 | 3.81E-56 | -1.69E-46 |
MS.gene057825 | MS.gene46957 | 0.814118 | 1.81E-51 | -1.69E-46 |
MS.gene057888 | MS.gene46957 | 0.80099 | 1.11E-48 | -1.69E-46 |
MS.gene058007 | MS.gene46957 | 0.802879 | 4.55E-49 | -1.69E-46 |
MS.gene058072 | MS.gene46957 | 0.80305 | 4.19E-49 | -1.69E-46 |
MS.gene058075 | MS.gene46957 | 0.82951 | 4.94E-55 | -1.69E-46 |
MS.gene05858 | MS.gene46957 | 0.801579 | 8.42E-49 | -1.69E-46 |
MS.gene058660 | MS.gene46957 | 0.8086 | 2.86E-50 | -1.69E-46 |
MS.gene058928 | MS.gene46957 | 0.801726 | 7.86E-49 | -1.69E-46 |
MS.gene058949 | MS.gene46957 | 0.805273 | 1.45E-49 | -1.69E-46 |
MS.gene058995 | MS.gene46957 | 0.868415 | 6.64E-66 | -1.69E-46 |
MS.gene059011 | MS.gene46957 | 0.81672 | 4.78E-52 | -1.69E-46 |
MS.gene05907 | MS.gene46957 | 0.81039 | 1.18E-50 | -1.69E-46 |
MS.gene059294 | MS.gene46957 | 0.808111 | 3.64E-50 | -1.69E-46 |
MS.gene059420 | MS.gene46957 | 0.846066 | 2.74E-59 | -1.69E-46 |
MS.gene059462 | MS.gene46957 | 0.835537 | 1.58E-56 | -1.69E-46 |
MS.gene059688 | MS.gene46957 | 0.819941 | 8.92E-53 | -1.69E-46 |
MS.gene059692 | MS.gene46957 | 0.805039 | 1.62E-49 | -1.69E-46 |
MS.gene059695 | MS.gene46957 | 0.808949 | 2.41E-50 | -1.69E-46 |
MS.gene059711 | MS.gene46957 | 0.80021 | 1.60E-48 | -1.69E-46 |
MS.gene059807 | MS.gene46957 | 0.852154 | 5.56E-61 | -1.69E-46 |
MS.gene059876 | MS.gene46957 | 0.884501 | 1.82E-71 | -1.69E-46 |
MS.gene059933 | MS.gene46957 | 0.81366 | 2.29E-51 | -1.69E-46 |
MS.gene06037 | MS.gene46957 | 0.808033 | 3.78E-50 | -1.69E-46 |
MS.gene060403 | MS.gene46957 | 0.829981 | 3.80E-55 | -1.69E-46 |
MS.gene060495 | MS.gene46957 | 0.81283 | 3.48E-51 | -1.69E-46 |
MS.gene060837 | MS.gene46957 | 0.811889 | 5.59E-51 | -1.69E-46 |
MS.gene061049 | MS.gene46957 | 0.823877 | 1.09E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene46957 | MS.gene019150 | PPI |
MS.gene46957 | MS.gene22222 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46957.t1 | MTR_3g449770 | 95.728 | 515 | 18 | 1 | 13 | 527 | 1 | 511 | 0.0 | 1014 |
MS.gene46957.t1 | MTR_1g069155 | 32.200 | 559 | 251 | 22 | 13 | 487 | 1 | 515 | 3.90e-51 | 183 |
MS.gene46957.t1 | MTR_7g099540 | 45.532 | 235 | 96 | 6 | 274 | 480 | 202 | 432 | 5.80e-44 | 162 |
MS.gene46957.t1 | MTR_7g099540 | 44.398 | 241 | 96 | 7 | 274 | 480 | 202 | 438 | 1.82e-41 | 155 |
MS.gene46957.t1 | MTR_1g084980 | 58.333 | 144 | 53 | 4 | 265 | 403 | 402 | 543 | 5.98e-35 | 139 |
MS.gene46957.t1 | MTR_7g111320 | 35.762 | 302 | 138 | 10 | 164 | 417 | 245 | 538 | 1.61e-28 | 120 |
MS.gene46957.t1 | MTR_1g019240 | 58.000 | 100 | 38 | 2 | 303 | 400 | 65 | 162 | 5.70e-27 | 110 |
MS.gene46957.t1 | MTR_7g110810 | 49.107 | 112 | 49 | 3 | 299 | 402 | 173 | 284 | 4.58e-23 | 101 |
MS.gene46957.t1 | MTR_5g017040 | 68.571 | 70 | 20 | 1 | 334 | 403 | 114 | 181 | 4.93e-22 | 97.8 |
MS.gene46957.t1 | MTR_1g084980 | 49.138 | 116 | 55 | 2 | 265 | 378 | 402 | 515 | 1.13e-17 | 86.7 |
MS.gene46957.t1 | MTR_4g131160 | 57.143 | 63 | 27 | 0 | 327 | 389 | 198 | 260 | 2.96e-17 | 84.3 |
MS.gene46957.t1 | MTR_4g131160 | 57.143 | 63 | 27 | 0 | 327 | 389 | 201 | 263 | 3.08e-17 | 84.3 |
MS.gene46957.t1 | MTR_1g080890 | 53.968 | 63 | 29 | 0 | 327 | 389 | 195 | 257 | 1.27e-15 | 79.0 |
MS.gene46957.t1 | MTR_5g005110 | 44.304 | 79 | 37 | 2 | 320 | 391 | 217 | 295 | 1.39e-13 | 72.4 |
MS.gene46957.t1 | MTR_1g106470 | 37.500 | 88 | 45 | 2 | 312 | 389 | 178 | 265 | 2.27e-12 | 68.2 |
MS.gene46957.t1 | MTR_1g017350 | 39.450 | 109 | 61 | 3 | 282 | 389 | 221 | 325 | 4.88e-12 | 68.2 |
MS.gene46957.t1 | MTR_1g017350 | 39.450 | 109 | 61 | 3 | 282 | 389 | 221 | 325 | 5.07e-12 | 68.2 |
MS.gene46957.t1 | MTR_1g017350 | 39.450 | 109 | 61 | 3 | 282 | 389 | 221 | 325 | 5.26e-12 | 68.2 |
MS.gene46957.t1 | MTR_1g017350 | 39.450 | 109 | 61 | 3 | 282 | 389 | 221 | 325 | 5.34e-12 | 68.2 |
MS.gene46957.t1 | MTR_3g498825 | 47.945 | 73 | 36 | 2 | 327 | 397 | 149 | 221 | 7.04e-12 | 67.0 |
MS.gene46957.t1 | MTR_1g106480 | 54.000 | 50 | 21 | 1 | 342 | 389 | 86 | 135 | 8.51e-12 | 63.9 |
MS.gene46957.t1 | MTR_3g103030 | 34.694 | 98 | 51 | 3 | 327 | 419 | 231 | 320 | 8.95e-12 | 66.6 |
MS.gene46957.t1 | MTR_5g048860 | 51.562 | 64 | 30 | 1 | 327 | 389 | 367 | 430 | 9.14e-12 | 67.8 |
MS.gene46957.t1 | MTR_7g053410 | 50.000 | 64 | 31 | 1 | 327 | 389 | 319 | 382 | 1.73e-11 | 67.0 |
MS.gene46957.t1 | MTR_7g053410 | 50.000 | 64 | 31 | 1 | 327 | 389 | 319 | 382 | 1.89e-11 | 67.0 |
MS.gene46957.t1 | MTR_3g116770 | 50.000 | 64 | 31 | 1 | 327 | 389 | 193 | 256 | 2.34e-11 | 66.2 |
MS.gene46957.t1 | MTR_3g116770 | 50.000 | 64 | 31 | 1 | 327 | 389 | 193 | 256 | 2.38e-11 | 66.2 |
MS.gene46957.t1 | MTR_1g018090 | 44.118 | 68 | 33 | 1 | 327 | 389 | 276 | 343 | 2.60e-11 | 65.9 |
MS.gene46957.t1 | MTR_8g099880 | 35.000 | 120 | 70 | 5 | 327 | 444 | 147 | 260 | 2.84e-11 | 65.5 |
MS.gene46957.t1 | MTR_8g012290 | 50.000 | 64 | 31 | 1 | 327 | 389 | 293 | 356 | 3.31e-11 | 65.9 |
MS.gene46957.t1 | MTR_8g012290 | 50.000 | 64 | 31 | 1 | 327 | 389 | 293 | 356 | 3.36e-11 | 65.9 |
MS.gene46957.t1 | MTR_1g059270 | 31.132 | 106 | 71 | 2 | 327 | 430 | 162 | 267 | 4.27e-11 | 64.7 |
MS.gene46957.t1 | MTR_8g065740 | 50.000 | 64 | 31 | 1 | 327 | 389 | 307 | 370 | 5.13e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene46957.t1 | AT2G43010 | 35.388 | 503 | 228 | 18 | 20 | 510 | 6 | 423 | 1.68e-59 | 203 |
MS.gene46957.t1 | AT2G43010 | 35.248 | 505 | 228 | 19 | 20 | 510 | 6 | 425 | 1.11e-57 | 198 |
MS.gene46957.t1 | AT2G43010 | 35.248 | 505 | 228 | 19 | 20 | 510 | 13 | 432 | 1.79e-57 | 198 |
MS.gene46957.t1 | AT2G43010 | 35.446 | 505 | 227 | 20 | 20 | 510 | 48 | 467 | 3.26e-57 | 198 |
MS.gene46957.t1 | AT2G43010 | 35.368 | 475 | 212 | 17 | 20 | 484 | 6 | 395 | 2.30e-54 | 189 |
MS.gene46957.t1 | AT2G20180 | 36.842 | 437 | 193 | 17 | 13 | 422 | 1 | 381 | 8.61e-45 | 164 |
MS.gene46957.t1 | AT2G20180 | 36.842 | 437 | 193 | 17 | 13 | 422 | 1 | 381 | 8.61e-45 | 164 |
MS.gene46957.t1 | AT2G20180 | 36.842 | 437 | 193 | 17 | 13 | 422 | 1 | 381 | 8.61e-45 | 164 |
MS.gene46957.t1 | AT2G20180 | 36.842 | 437 | 193 | 17 | 13 | 422 | 1 | 381 | 8.61e-45 | 164 |
MS.gene46957.t1 | AT3G59060 | 44.144 | 333 | 115 | 14 | 207 | 509 | 146 | 437 | 1.01e-44 | 164 |
MS.gene46957.t1 | AT3G59060 | 44.144 | 333 | 115 | 14 | 207 | 509 | 146 | 437 | 1.01e-44 | 164 |
MS.gene46957.t1 | AT3G59060 | 44.144 | 333 | 115 | 14 | 207 | 509 | 146 | 437 | 1.01e-44 | 164 |
MS.gene46957.t1 | AT3G59060 | 44.411 | 331 | 115 | 14 | 207 | 509 | 146 | 435 | 2.61e-44 | 162 |
MS.gene46957.t1 | AT2G20180 | 35.176 | 398 | 181 | 16 | 13 | 389 | 1 | 342 | 5.05e-39 | 145 |
MS.gene46957.t1 | AT2G20180 | 38.352 | 352 | 147 | 13 | 86 | 422 | 14 | 310 | 9.53e-38 | 144 |
MS.gene46957.t1 | AT2G20180 | 38.352 | 352 | 147 | 13 | 86 | 422 | 14 | 310 | 9.53e-38 | 144 |
MS.gene46957.t1 | AT2G20180 | 38.352 | 352 | 147 | 13 | 86 | 422 | 14 | 310 | 9.53e-38 | 144 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT1G09530 | 33.945 | 436 | 193 | 23 | 31 | 404 | 18 | 420 | 5.76e-34 | 135 |
MS.gene46957.t1 | AT4G28800 | 28.753 | 473 | 221 | 17 | 39 | 475 | 19 | 411 | 3.03e-28 | 117 |
MS.gene46957.t1 | AT4G28800 | 28.541 | 473 | 216 | 18 | 39 | 475 | 31 | 417 | 2.51e-26 | 112 |
MS.gene46957.t1 | AT5G67110 | 48.529 | 136 | 48 | 3 | 266 | 399 | 48 | 163 | 2.99e-26 | 106 |
MS.gene46957.t1 | AT4G28790 | 28.993 | 407 | 217 | 15 | 32 | 420 | 18 | 370 | 4.30e-25 | 107 |
MS.gene46957.t1 | AT4G28815 | 40.217 | 184 | 75 | 8 | 313 | 485 | 53 | 212 | 4.79e-25 | 103 |
MS.gene46957.t1 | AT4G36930 | 73.611 | 72 | 17 | 1 | 331 | 400 | 197 | 268 | 6.38e-25 | 106 |
MS.gene46957.t1 | AT4G28815 | 42.391 | 184 | 71 | 10 | 313 | 485 | 129 | 288 | 1.01e-24 | 105 |
MS.gene46957.t1 | AT2G46970 | 41.379 | 174 | 81 | 7 | 266 | 426 | 133 | 298 | 3.15e-24 | 105 |
MS.gene46957.t1 | AT2G46970 | 41.379 | 174 | 81 | 7 | 266 | 426 | 142 | 307 | 3.29e-24 | 105 |
MS.gene46957.t1 | AT2G46970 | 41.520 | 171 | 79 | 7 | 269 | 426 | 167 | 329 | 4.31e-24 | 105 |
MS.gene46957.t1 | AT4G00050 | 53.271 | 107 | 39 | 3 | 285 | 387 | 68 | 167 | 2.25e-22 | 97.8 |
MS.gene46957.t1 | AT4G00050 | 53.271 | 107 | 39 | 3 | 285 | 387 | 170 | 269 | 5.90e-22 | 98.2 |
MS.gene46957.t1 | AT4G00050 | 53.271 | 107 | 39 | 3 | 285 | 387 | 170 | 269 | 6.49e-22 | 98.2 |
MS.gene46957.t1 | AT2G24260 | 58.730 | 63 | 26 | 0 | 327 | 389 | 37 | 99 | 1.13e-18 | 86.3 |
MS.gene46957.t1 | AT4G28790 | 27.446 | 368 | 199 | 12 | 32 | 385 | 18 | 331 | 4.32e-18 | 86.3 |
MS.gene46957.t1 | AT2G24260 | 58.730 | 63 | 26 | 0 | 327 | 389 | 140 | 202 | 5.29e-18 | 85.9 |
MS.gene46957.t1 | AT5G58010 | 54.054 | 74 | 31 | 1 | 316 | 389 | 93 | 163 | 5.59e-18 | 85.1 |
MS.gene46957.t1 | AT4G30980 | 57.143 | 63 | 27 | 0 | 327 | 389 | 132 | 194 | 1.31e-17 | 84.3 |
MS.gene46957.t1 | AT4G30980 | 57.143 | 63 | 27 | 0 | 327 | 389 | 180 | 242 | 3.53e-17 | 83.6 |
MS.gene46957.t1 | AT3G62090 | 49.474 | 95 | 45 | 3 | 320 | 412 | 160 | 253 | 8.00e-17 | 82.4 |
MS.gene46957.t1 | AT3G62090 | 49.474 | 95 | 45 | 3 | 320 | 412 | 177 | 270 | 1.04e-16 | 82.4 |
MS.gene46957.t1 | AT4G28811 | 36.992 | 246 | 123 | 6 | 260 | 486 | 295 | 527 | 1.05e-16 | 83.6 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 103 | 267 | 1.41e-14 | 75.5 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 154 | 318 | 1.59e-14 | 75.9 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 154 | 318 | 1.59e-14 | 75.9 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 154 | 318 | 1.59e-14 | 75.9 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 154 | 318 | 1.59e-14 | 75.9 |
MS.gene46957.t1 | AT1G26260 | 33.333 | 165 | 92 | 5 | 272 | 418 | 132 | 296 | 1.99e-14 | 75.5 |
MS.gene46957.t1 | AT1G68240 | 38.710 | 124 | 67 | 4 | 327 | 444 | 63 | 183 | 1.16e-13 | 70.1 |
MS.gene46957.t1 | AT5G61270 | 46.078 | 102 | 53 | 2 | 299 | 399 | 135 | 235 | 2.43e-13 | 72.0 |
MS.gene46957.t1 | AT5G61270 | 46.078 | 102 | 53 | 2 | 299 | 399 | 47 | 147 | 2.48e-13 | 70.9 |
MS.gene46957.t1 | AT5G61270 | 46.078 | 102 | 53 | 2 | 299 | 399 | 47 | 147 | 2.48e-13 | 70.9 |
MS.gene46957.t1 | AT4G33880 | 35.652 | 115 | 57 | 4 | 308 | 415 | 247 | 351 | 4.35e-13 | 71.2 |
MS.gene46957.t1 | AT5G43175 | 40.789 | 76 | 40 | 1 | 319 | 389 | 126 | 201 | 4.94e-13 | 68.9 |
MS.gene46957.t1 | AT1G68240 | 39.091 | 110 | 61 | 3 | 327 | 430 | 63 | 172 | 5.07e-13 | 67.8 |
MS.gene46957.t1 | AT1G02340 | 36.667 | 120 | 52 | 3 | 293 | 412 | 113 | 208 | 6.05e-13 | 70.1 |
MS.gene46957.t1 | AT1G02340 | 36.667 | 120 | 52 | 3 | 293 | 412 | 106 | 201 | 6.55e-13 | 69.7 |
MS.gene46957.t1 | AT5G50915 | 29.358 | 218 | 100 | 8 | 250 | 427 | 53 | 256 | 1.34e-12 | 68.9 |
MS.gene46957.t1 | AT5G50915 | 29.358 | 218 | 100 | 8 | 250 | 427 | 53 | 256 | 1.34e-12 | 68.9 |
MS.gene46957.t1 | AT1G27740 | 36.449 | 107 | 59 | 3 | 303 | 403 | 148 | 251 | 1.62e-12 | 68.2 |
MS.gene46957.t1 | AT2G14760 | 38.710 | 93 | 49 | 2 | 302 | 389 | 217 | 306 | 1.66e-12 | 68.9 |
MS.gene46957.t1 | AT5G50915 | 29.279 | 222 | 95 | 9 | 250 | 427 | 53 | 256 | 2.09e-12 | 68.2 |
MS.gene46957.t1 | AT5G50915 | 29.279 | 222 | 95 | 9 | 250 | 427 | 53 | 256 | 2.09e-12 | 68.2 |
MS.gene46957.t1 | AT3G23690 | 34.028 | 144 | 86 | 4 | 251 | 389 | 117 | 256 | 5.61e-12 | 67.8 |
MS.gene46957.t1 | AT1G68920 | 36.170 | 141 | 79 | 6 | 327 | 458 | 304 | 442 | 6.50e-12 | 68.2 |
MS.gene46957.t1 | AT1G68920 | 36.170 | 141 | 79 | 6 | 327 | 458 | 305 | 443 | 6.63e-12 | 68.2 |
MS.gene46957.t1 | AT1G68920 | 36.170 | 141 | 79 | 6 | 327 | 458 | 305 | 443 | 6.63e-12 | 68.2 |
MS.gene46957.t1 | AT1G68920 | 36.170 | 141 | 79 | 6 | 327 | 458 | 305 | 443 | 6.63e-12 | 68.2 |
MS.gene46957.t1 | AT2G18300 | 30.808 | 198 | 113 | 7 | 286 | 460 | 129 | 325 | 9.33e-12 | 67.0 |
MS.gene46957.t1 | AT2G18300 | 30.808 | 198 | 113 | 7 | 286 | 460 | 129 | 325 | 1.17e-11 | 66.6 |
MS.gene46957.t1 | AT2G14760 | 42.647 | 68 | 34 | 1 | 327 | 389 | 252 | 319 | 1.59e-11 | 66.2 |
MS.gene46957.t1 | AT4G34530 | 48.438 | 64 | 32 | 1 | 327 | 389 | 174 | 237 | 1.93e-11 | 65.9 |
MS.gene46957.t1 | AT3G07340 | 39.216 | 102 | 43 | 3 | 304 | 389 | 225 | 323 | 2.12e-11 | 66.6 |
MS.gene46957.t1 | AT3G07340 | 39.216 | 102 | 43 | 3 | 304 | 389 | 225 | 323 | 2.54e-11 | 66.2 |
MS.gene46957.t1 | AT5G67110 | 40.367 | 109 | 44 | 3 | 266 | 374 | 48 | 135 | 4.25e-11 | 61.6 |
MS.gene46957.t1 | AT5G48560 | 50.000 | 64 | 31 | 1 | 327 | 389 | 303 | 366 | 4.97e-11 | 65.5 |
MS.gene46957.t1 | AT5G48560 | 50.000 | 64 | 31 | 1 | 327 | 389 | 303 | 366 | 5.47e-11 | 65.5 |
MS.gene46957.t1 | AT4G36540 | 36.697 | 109 | 60 | 3 | 289 | 389 | 99 | 206 | 7.13e-11 | 63.9 |
MS.gene46957.t1 | AT4G36540 | 36.697 | 109 | 60 | 3 | 289 | 389 | 99 | 206 | 7.14e-11 | 63.9 |
MS.gene46957.t1 | AT5G67110 | 37.500 | 136 | 41 | 4 | 266 | 399 | 48 | 141 | 7.98e-11 | 62.0 |
MS.gene46957.t1 | AT2G18300 | 30.612 | 196 | 114 | 5 | 286 | 460 | 129 | 323 | 8.34e-11 | 63.9 |
MS.gene46957.t1 | AT1G10120 | 48.438 | 64 | 32 | 1 | 327 | 389 | 208 | 271 | 8.41e-11 | 64.3 |
MS.gene46957.t1 | AT1G10120 | 48.438 | 64 | 32 | 1 | 327 | 389 | 208 | 271 | 8.41e-11 | 64.3 |
Find 112 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCGTTCCTGATTGGAATTT+TGG | 0.193756 | 3.2:+37617913 | MS.gene46957:CDS |
TACTTCATCTTCTGGTGGTT+CGG | 0.273371 | 3.2:+37618780 | MS.gene46957:CDS |
GAACTTGTTTCTTATTTGTT+TGG | 0.281722 | 3.2:-37618141 | None:intergenic |
TGATGCTGTGGGTGGCAAAA+TGG | 0.294348 | 3.2:+37620367 | MS.gene46957:CDS |
CATTGGTCCACTGCTATTGC+TGG | 0.300560 | 3.2:-37620324 | None:intergenic |
TGTTCAAGTGGATCCTCAAT+AGG | 0.303381 | 3.2:-37618271 | None:intergenic |
AGGCACCTAAAACAGGATTT+TGG | 0.303664 | 3.2:-37619778 | None:intergenic |
TAAATCAGCCGTGAGGAAAA+AGG | 0.304657 | 3.2:+37619002 | MS.gene46957:CDS |
ACATCATTTCTGACTTGTTC+AGG | 0.332564 | 3.2:-37618700 | None:intergenic |
ATCACTTCAGTTACAACTTC+AGG | 0.334793 | 3.2:+37619483 | MS.gene46957:CDS |
AAGGTGGAAGTTCAGATAAA+AGG | 0.339660 | 3.2:-37618309 | None:intergenic |
GATGCAAAATCCTGCTCTTT+CGG | 0.342576 | 3.2:+37619817 | MS.gene46957:CDS |
GGGTATCAAGCAACGGTGTT+TGG | 0.343568 | 3.2:+37618659 | MS.gene46957:CDS |
ATGAACTTGTGGAGCTTCTA+TGG | 0.349007 | 3.2:+37618092 | MS.gene46957:CDS |
CATCTTGATCCTGTTGGACT+TGG | 0.357855 | 3.2:-37618630 | None:intergenic |
ACTTCATCTTCTGGTGGTTC+GGG | 0.366507 | 3.2:+37618781 | MS.gene46957:CDS |
AAGATGATGAAACTGTTTCA+TGG | 0.378684 | 3.2:+37618236 | MS.gene46957:CDS |
GTTGTTTCTTTGCAATGAAT+CGG | 0.393694 | 3.2:-37618428 | None:intergenic |
GGCATCTCAGCGGTCAGGTT+CGG | 0.395919 | 3.2:+37619023 | MS.gene46957:CDS |
ATGTTTGCTGTTCCACTCAT+TGG | 0.397921 | 3.2:-37620341 | None:intergenic |
TGCTTACATCTTGATCCTGT+TGG | 0.402600 | 3.2:-37618636 | None:intergenic |
GACGGATCCAGAGGCATTCT+CGG | 0.403301 | 3.2:-37619716 | None:intergenic |
GTCATGACTTCTTGTAGATA+AGG | 0.410497 | 3.2:-37618827 | None:intergenic |
GGTGCAAATAGGTACTGGTT+TGG | 0.413855 | 3.2:+37617870 | MS.gene46957:intron |
TCAGCACTATATGTCACAAA+TGG | 0.421098 | 3.2:+37619640 | MS.gene46957:CDS |
ATAGAAGCTCCACAAGTTCA+TGG | 0.431688 | 3.2:-37618090 | None:intergenic |
TCTTATGCAAAATGCTTCTC+AGG | 0.438287 | 3.2:+37619868 | MS.gene46957:CDS |
TTGAAAGACTCGACGTTACA+AGG | 0.440966 | 3.2:-37618328 | None:intergenic |
ACAATTCCTCGGCATGAGAA+TGG | 0.443028 | 3.2:+37618730 | MS.gene46957:CDS |
TGAACAACACCGTTCCTGAT+TGG | 0.444912 | 3.2:+37617905 | MS.gene46957:CDS |
TTGTTTCTTTGCAATGAATC+GGG | 0.448535 | 3.2:-37618427 | None:intergenic |
CGGAAGCAACCAAGTCCAAC+AGG | 0.451058 | 3.2:+37618621 | MS.gene46957:CDS |
CCATATCTGTACATATTCAT+TGG | 0.451704 | 3.2:-37620263 | None:intergenic |
GTAGATGCTAAAGTAACATT+GGG | 0.457098 | 3.2:-37618502 | None:intergenic |
TGGCTCGTTAATGTCTGGTT+TGG | 0.458380 | 3.2:-37619758 | None:intergenic |
TAGTTGAAGGCACCTAAAAC+AGG | 0.459214 | 3.2:-37619785 | None:intergenic |
CTATATGTCACAAATGGGTA+TGG | 0.459276 | 3.2:+37619646 | MS.gene46957:CDS |
GGAGCAATATGCTCGTTACA+TGG | 0.460185 | 3.2:+37619838 | MS.gene46957:CDS |
TAATCAAAAGAAGCAACCTA+TGG | 0.462757 | 3.2:+37617954 | MS.gene46957:CDS |
CAATTCCTCGGCATGAGAAT+GGG | 0.468759 | 3.2:+37618731 | MS.gene46957:CDS |
AGAAAAGTTTACAACCTTGC+CGG | 0.469128 | 3.2:-37618464 | None:intergenic |
GTTCAAGTGGATCCTCAATA+GGG | 0.473250 | 3.2:-37618270 | None:intergenic |
AACAGGATCAAGATGTAAGC+AGG | 0.473432 | 3.2:+37618638 | MS.gene46957:CDS |
TCGGCATGAGAATGGGAAAT+CGG | 0.473920 | 3.2:+37618738 | MS.gene46957:CDS |
GATCCTCAATAGGGTATTGT+TGG | 0.475150 | 3.2:-37618261 | None:intergenic |
TTCTGTTAGGTGATGTGGAT+GGG | 0.477428 | 3.2:+37619584 | MS.gene46957:intron |
GAACATAATTCTTGTTCAAG+TGG | 0.477770 | 3.2:-37618283 | None:intergenic |
TAGGTGATGTGGATGGGATC+TGG | 0.479810 | 3.2:+37619590 | MS.gene46957:intron |
AACAACGATTTGTGTGGATC+CGG | 0.480481 | 3.2:+37618445 | MS.gene46957:CDS |
ATAGGAAATTCCTGAACAAA+AGG | 0.481459 | 3.2:-37618376 | None:intergenic |
GCAATTACCGAGAATGCCTC+TGG | 0.483577 | 3.2:+37619709 | MS.gene46957:CDS |
TGTTCAGGAATTTCCTATGT+CGG | 0.485624 | 3.2:+37618381 | MS.gene46957:CDS |
CCAATGAATATGTACAGATA+TGG | 0.491789 | 3.2:+37620263 | MS.gene46957:CDS |
TGTAGATGCTAAAGTAACAT+TGG | 0.495901 | 3.2:-37618503 | None:intergenic |
CATGACACCGATGATGCTAC+CGG | 0.496261 | 3.2:+37619613 | MS.gene46957:CDS |
TTTCTGTTAGGTGATGTGGA+TGG | 0.500303 | 3.2:+37619583 | MS.gene46957:intron |
GATGCTGTGGGTGGCAAAAT+GGG | 0.501876 | 3.2:+37620368 | MS.gene46957:CDS |
GGTGGTTCGGGAAGTAGTCT+TGG | 0.502929 | 3.2:+37618793 | MS.gene46957:CDS |
TCACTCCCAAAATTCCAATC+AGG | 0.503469 | 3.2:-37617919 | None:intergenic |
AATCAAAAGAAGCAACCTAT+GGG | 0.506530 | 3.2:+37617955 | MS.gene46957:CDS |
ATTTCTGACTTGTTCAGGCT+CGG | 0.509459 | 3.2:-37618695 | None:intergenic |
GAATGGGAAATCGGAGATGT+TGG | 0.520509 | 3.2:+37618747 | MS.gene46957:CDS |
ACTCATACCTCACAGTAGTA+AGG | 0.524016 | 3.2:+37619218 | MS.gene46957:CDS |
CAGCACTATATGTCACAAAT+GGG | 0.528954 | 3.2:+37619641 | MS.gene46957:CDS |
AGTGCATAATCTTTCAGAAA+GGG | 0.530854 | 3.2:+37619068 | MS.gene46957:CDS |
GACATATAGTGCTGATATCC+CGG | 0.534372 | 3.2:-37619632 | None:intergenic |
GTTACTTTAGCATCTACAAA+CGG | 0.535195 | 3.2:+37618508 | MS.gene46957:CDS |
CAAAGCATCAATGTTAGAAG+AGG | 0.538478 | 3.2:+37619444 | MS.gene46957:CDS |
TGTCTGGTTTGGTGTCTGAC+AGG | 0.541123 | 3.2:-37619747 | None:intergenic |
GGCATTCTCGGTAATTGCAT+CGG | 0.543563 | 3.2:-37619704 | None:intergenic |
TGAAACCTCGGAGCCGACAT+AGG | 0.544656 | 3.2:-37618394 | None:intergenic |
TGATATCCCGGTAGCATCAT+CGG | 0.547358 | 3.2:-37619620 | None:intergenic |
GCATATTGCTCCGAAAGAGC+AGG | 0.550353 | 3.2:-37619827 | None:intergenic |
CAAAGAAACAACGATTTGTG+TGG | 0.566041 | 3.2:+37618439 | MS.gene46957:CDS |
TGGTGTCTGACAGGAAGAAA+CGG | 0.568009 | 3.2:-37619738 | None:intergenic |
ATTGGTCCACTGCTATTGCT+GGG | 0.572900 | 3.2:-37620323 | None:intergenic |
CGATTTGTGTGGATCCGGCA+AGG | 0.573793 | 3.2:+37618450 | MS.gene46957:CDS |
GTGGAGCTTCTATGGCAGAA+TGG | 0.575038 | 3.2:+37618100 | MS.gene46957:CDS |
AGCGGTCAGGTTCGGCTCGT+AGG | 0.585796 | 3.2:+37619031 | MS.gene46957:CDS |
CCAGAAGATGAAGTAAAAGC+AGG | 0.586941 | 3.2:-37618772 | None:intergenic |
GATCCAACAATACCCTATTG+AGG | 0.587994 | 3.2:+37618258 | MS.gene46957:CDS |
AAGTGCATAATCTTTCAGAA+AGG | 0.591388 | 3.2:+37619067 | MS.gene46957:CDS |
TATATGTCACAAATGGGTAT+GGG | 0.594345 | 3.2:+37619647 | MS.gene46957:CDS |
CCCAAAATTCCAATCAGGAA+CGG | 0.594898 | 3.2:-37617914 | None:intergenic |
ATGACACCGATGATGCTACC+GGG | 0.598634 | 3.2:+37619614 | MS.gene46957:CDS |
AGCAAACATTAATGATGCTG+TGG | 0.601820 | 3.2:+37620355 | MS.gene46957:CDS |
GATTTCCCATTCTCATGCCG+AGG | 0.602580 | 3.2:-37618736 | None:intergenic |
CAGGCTGGACCATGAACTTG+TGG | 0.607340 | 3.2:+37618081 | MS.gene46957:intron |
GATGGATGTTGAAGATTCAG+TGG | 0.609243 | 3.2:+37618864 | MS.gene46957:CDS |
GAGCAATATGCTCGTTACAT+GGG | 0.614005 | 3.2:+37619839 | MS.gene46957:CDS |
GGAAATTCCTGAACAAAAGG+CGG | 0.618190 | 3.2:-37618373 | None:intergenic |
ATGTTCAGAAGACAATTCCT+CGG | 0.630703 | 3.2:+37618719 | MS.gene46957:CDS |
GAGTGTTCGACGATGACAGT+TGG | 0.633825 | 3.2:+37618586 | MS.gene46957:CDS |
GGAACATGATGATGAAACCT+CGG | 0.639628 | 3.2:-37618406 | None:intergenic |
ATATTGAACACACACCCCAT+AGG | 0.642122 | 3.2:-37617970 | None:intergenic |
ACAGGATCAAGATGTAAGCA+GGG | 0.649737 | 3.2:+37618639 | MS.gene46957:CDS |
AGATTCAGTGGAACAAAGCG+AGG | 0.656069 | 3.2:+37618876 | MS.gene46957:CDS |
GTAAGCAGGGTATCAAGCAA+CGG | 0.657240 | 3.2:+37618652 | MS.gene46957:CDS |
ACAGTTGGTTCGAGTTATTG+CGG | 0.658618 | 3.2:+37618601 | MS.gene46957:CDS |
GAAGAAACGGACGGATCCAG+AGG | 0.660505 | 3.2:-37619725 | None:intergenic |
AACATTAATGATGCTGTGGG+TGG | 0.661408 | 3.2:+37620359 | MS.gene46957:CDS |
GTCTGACAGGAAGAAACGGA+CGG | 0.668045 | 3.2:-37619734 | None:intergenic |
AATAGCAGTGGACCAATGAG+TGG | 0.668226 | 3.2:+37620329 | MS.gene46957:CDS |
GGTCCACTGCTATTGCTGGG+TGG | 0.669356 | 3.2:-37620320 | None:intergenic |
ATTCCACCCAGCAATAGCAG+TGG | 0.670400 | 3.2:+37620317 | MS.gene46957:CDS |
AATTTCCTATGTCGGCTCCG+AGG | 0.681257 | 3.2:+37618389 | MS.gene46957:CDS |
ATCAAAAGAAGCAACCTATG+GGG | 0.695787 | 3.2:+37617956 | MS.gene46957:CDS |
GCAAACATTAATGATGCTGT+GGG | 0.698935 | 3.2:+37620356 | MS.gene46957:CDS |
GATTATGCACTTCAGCAGCG+CGG | 0.709911 | 3.2:-37619056 | None:intergenic |
TGACAAACCTTACTACTGTG+AGG | 0.713524 | 3.2:-37619225 | None:intergenic |
AAAGACTCGACGTTACAAGG+TGG | 0.729579 | 3.2:-37618325 | None:intergenic |
CAGAACTTAAATCAGCCGTG+AGG | 0.748263 | 3.2:+37618995 | MS.gene46957:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGGAATAAAAAATTTAA+AGG | - | chr3.2:37617697-37617716 | None:intergenic | 10.0% |
!! | AAAGGAATAAAAAATTTAAA+GGG | - | chr3.2:37617696-37617715 | None:intergenic | 10.0% |
!! | AGAATATCATTAATTTATAA+GGG | - | chr3.2:37620188-37620207 | None:intergenic | 10.0% |
!! | TATTTGATTATTCATTTAAA+TGG | + | chr3.2:37617750-37617769 | MS.gene46957:intron | 10.0% |
!!! | GATTTTAATATTGATAAAAA+AGG | - | chr3.2:37617714-37617733 | None:intergenic | 10.0% |
!! | GAATATCATTAATTTATAAG+GGG | - | chr3.2:37620187-37620206 | None:intergenic | 15.0% |
!! | GAGAATATCATTAATTTATA+AGG | - | chr3.2:37620189-37620208 | None:intergenic | 15.0% |
!! | TGAAAAACATCTAATTATAA+AGG | - | chr3.2:37618927-37618946 | None:intergenic | 15.0% |
!!! | AAACTAATTTTCTTTCATTT+TGG | + | chr3.2:37617849-37617868 | MS.gene46957:intron | 15.0% |
!!! | AAATTTTAGAGACAAAATTA+CGG | + | chr3.2:37618537-37618556 | MS.gene46957:CDS | 15.0% |
!!! | ATTTTTTTGATTTTTCTGTT+AGG | + | chr3.2:37619571-37619590 | MS.gene46957:intron | 15.0% |
!! | AACATTAAACACAACAAATT+AGG | - | chr3.2:37617481-37617500 | None:intergenic | 20.0% |
!! | AAGGTAAAATTAATTTCCAT+AGG | - | chr3.2:37620221-37620240 | None:intergenic | 20.0% |
!! | AGGTAAAATTAATTTCCATA+GGG | - | chr3.2:37620220-37620239 | None:intergenic | 20.0% |
!! | TAATATGAGAACAATATTAG+AGG | - | chr3.2:37620425-37620444 | None:intergenic | 20.0% |
!!! | AATTTTAGAGACAAAATTAC+GGG | + | chr3.2:37618538-37618557 | MS.gene46957:CDS | 20.0% |
!!! | ATTAATTTTACCTTGTATGT+TGG | + | chr3.2:37620227-37620246 | MS.gene46957:intron | 20.0% |
!!! | TATTTTATTCTTCTGCTTAA+TGG | + | chr3.2:37617784-37617803 | MS.gene46957:intron | 20.0% |
! | AAAAATTCTTTAGCAATGTG+AGG | - | chr3.2:37619557-37619576 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACAACTTA+TGG | - | chr3.2:37619991-37620010 | None:intergenic | 25.0% |
! | ACTGTTTACATGTAAGATAT+AGG | - | chr3.2:37620048-37620067 | None:intergenic | 25.0% |
! | TGCCTACAAAAAATAAAACA+CGG | - | chr3.2:37619256-37619275 | None:intergenic | 25.0% |
!! | AGACTTGATTTTTCCAATTA+TGG | + | chr3.2:37617575-37617594 | MS.gene46957:intron | 25.0% |
!! | ATTTTACGGTTTGTGTTAAT+AGG | + | chr3.2:37618969-37618988 | MS.gene46957:intron | 25.0% |
!! | GAACTTGTTTCTTATTTGTT+TGG | - | chr3.2:37618144-37618163 | None:intergenic | 25.0% |
!! | GACTTGATTTTTCCAATTAT+GGG | + | chr3.2:37617576-37617595 | MS.gene46957:intron | 25.0% |
!! | TAAGTTAGTTTATCCAAACA+GGG | + | chr3.2:37620144-37620163 | MS.gene46957:intron | 25.0% |
!! | TTAAGTTAGTTTATCCAAAC+AGG | + | chr3.2:37620143-37620162 | MS.gene46957:intron | 25.0% |
!! | TTCACTGAGTTATGATTTTA+CGG | + | chr3.2:37618955-37618974 | MS.gene46957:intron | 25.0% |
!! | TTTTAAATTTAGACCCTGTT+TGG | - | chr3.2:37620160-37620179 | None:intergenic | 25.0% |
!! | TTTTATGATCTTTCTCTTCT+GGG | + | chr3.2:37617517-37617536 | MS.gene46957:intron | 25.0% |
!! | TTTTTATGATCTTTCTCTTC+TGG | + | chr3.2:37617516-37617535 | MS.gene46957:intron | 25.0% |
!!! | AACCGTGTTTTATTTTTTGT+AGG | + | chr3.2:37619251-37619270 | MS.gene46957:intron | 25.0% |
!!! | ACAAAAAATTTGTTAGTAGC+AGG | + | chr3.2:37619303-37619322 | MS.gene46957:intron | 25.0% |
!!! | ATGCAAGAGATTATTTTGTA+TGG | - | chr3.2:37619524-37619543 | None:intergenic | 25.0% |
!!! | TGCTAGTGGTTAATTTTTTA+AGG | + | chr3.2:37619278-37619297 | MS.gene46957:intron | 25.0% |
!!! | TTACTTGTCATTTTGTTTAC+AGG | + | chr3.2:37620545-37620564 | MS.gene46957:intron | 25.0% |
AAACTATCATGAAGAACTTG+TGG | - | chr3.2:37620015-37620034 | None:intergenic | 30.0% | |
AACCATGTGTTTAACATTAC+AGG | + | chr3.2:37618062-37618081 | MS.gene46957:intron | 30.0% | |
AAGATGATGAAACTGTTTCA+TGG | + | chr3.2:37618236-37618255 | MS.gene46957:CDS | 30.0% | |
AAGTGCATAATCTTTCAGAA+AGG | + | chr3.2:37619067-37619086 | MS.gene46957:CDS | 30.0% | |
AATCAAAAGAAGCAACCTAT+GGG | + | chr3.2:37617955-37617974 | MS.gene46957:CDS | 30.0% | |
AATTATGGGACTCTTGAAAT+TGG | + | chr3.2:37617590-37617609 | MS.gene46957:intron | 30.0% | |
AATTTCAAGAGTCCCATAAT+TGG | - | chr3.2:37617591-37617610 | None:intergenic | 30.0% | |
ACTCTTGAAATTGGAATTCT+TGG | + | chr3.2:37617599-37617618 | MS.gene46957:intron | 30.0% | |
AGACTATTTAGGAGATCTTA+TGG | + | chr3.2:37619945-37619964 | MS.gene46957:intron | 30.0% | |
AGTGCATAATCTTTCAGAAA+GGG | + | chr3.2:37619068-37619087 | MS.gene46957:CDS | 30.0% | |
ATAATCTTTCAGAAAGGGTA+AGG | + | chr3.2:37619073-37619092 | MS.gene46957:intron | 30.0% | |
ATAGGAAATTCCTGAACAAA+AGG | - | chr3.2:37618379-37618398 | None:intergenic | 30.0% | |
ATTAAATTGACGCGAATTCA+GGG | - | chr3.2:37619336-37619355 | None:intergenic | 30.0% | |
CCAATGAATATGTACAGATA+TGG | + | chr3.2:37620263-37620282 | MS.gene46957:CDS | 30.0% | |
CCATATCTGTACATATTCAT+TGG | - | chr3.2:37620266-37620285 | None:intergenic | 30.0% | |
GAACATAATTCTTGTTCAAG+TGG | - | chr3.2:37618286-37618305 | None:intergenic | 30.0% | |
GCGATTAAATCATACAACAT+GGG | - | chr3.2:37619382-37619401 | None:intergenic | 30.0% | |
GGAGTCAAATTCTACTTAAA+AGG | + | chr3.2:37617805-37617824 | MS.gene46957:intron | 30.0% | |
GTAGATGCTAAAGTAACATT+GGG | - | chr3.2:37618505-37618524 | None:intergenic | 30.0% | |
TAATCAAAAGAAGCAACCTA+TGG | + | chr3.2:37617954-37617973 | MS.gene46957:CDS | 30.0% | |
TAATCTTTCAGAAAGGGTAA+GGG | + | chr3.2:37619074-37619093 | MS.gene46957:intron | 30.0% | |
TATATGTCACAAATGGGTAT+GGG | + | chr3.2:37619647-37619666 | MS.gene46957:CDS | 30.0% | |
TGCGATTAAATCATACAACA+TGG | - | chr3.2:37619383-37619402 | None:intergenic | 30.0% | |
TGTAGATGCTAAAGTAACAT+TGG | - | chr3.2:37618506-37618525 | None:intergenic | 30.0% | |
TTAAGAGTTTAGATCATGTG+TGG | - | chr3.2:37617672-37617691 | None:intergenic | 30.0% | |
! | GTTACTTTAGCATCTACAAA+CGG | + | chr3.2:37618508-37618527 | MS.gene46957:CDS | 30.0% |
! | TATTCTCATGTTTTACCCTA+TGG | + | chr3.2:37620202-37620221 | MS.gene46957:intron | 30.0% |
! | TTGACTATTTTGTACAGCTT+GGG | - | chr3.2:37620291-37620310 | None:intergenic | 30.0% |
! | TTGTTTCTTTGCAATGAATC+GGG | - | chr3.2:37618430-37618449 | None:intergenic | 30.0% |
! | TTTGACTATTTTGTACAGCT+TGG | - | chr3.2:37620292-37620311 | None:intergenic | 30.0% |
!! | GTTGTTTCTTTGCAATGAAT+CGG | - | chr3.2:37618431-37618450 | None:intergenic | 30.0% |
!! | TCTTTCATTTTGGTGCAAAT+AGG | + | chr3.2:37617859-37617878 | MS.gene46957:intron | 30.0% |
!! | TTATTGGTTTATTGATGCAG+AGG | + | chr3.2:37619154-37619173 | MS.gene46957:intron | 30.0% |
AAAATGCTTCTCAGGTACTT+AGG | + | chr3.2:37619876-37619895 | MS.gene46957:intron | 35.0% | |
AAACACCTGAGAGACTATTT+AGG | + | chr3.2:37619934-37619953 | MS.gene46957:intron | 35.0% | |
AAGGTGGAAGTTCAGATAAA+AGG | - | chr3.2:37618312-37618331 | None:intergenic | 35.0% | |
AGAAAAGTTTACAACCTTGC+CGG | - | chr3.2:37618467-37618486 | None:intergenic | 35.0% | |
AGCAAACATTAATGATGCTG+TGG | + | chr3.2:37620355-37620374 | MS.gene46957:CDS | 35.0% | |
AGCCTGTAATGTTAAACACA+TGG | - | chr3.2:37618067-37618086 | None:intergenic | 35.0% | |
ATCAAAAGAAGCAACCTATG+GGG | + | chr3.2:37617956-37617975 | MS.gene46957:CDS | 35.0% | |
ATCACTTCAGTTACAACTTC+AGG | + | chr3.2:37619483-37619502 | MS.gene46957:CDS | 35.0% | |
ATGTGTTTAACATTACAGGC+TGG | + | chr3.2:37618066-37618085 | MS.gene46957:intron | 35.0% | |
ATGTTCAGAAGACAATTCCT+CGG | + | chr3.2:37618719-37618738 | MS.gene46957:CDS | 35.0% | |
CAAAATAGTGCCAACATACA+AGG | - | chr3.2:37620240-37620259 | None:intergenic | 35.0% | |
CAAAGAAACAACGATTTGTG+TGG | + | chr3.2:37618439-37618458 | MS.gene46957:CDS | 35.0% | |
CAAGAAGTCATGACAAAAAG+AGG | + | chr3.2:37618836-37618855 | MS.gene46957:CDS | 35.0% | |
CAGCACTATATGTCACAAAT+GGG | + | chr3.2:37619641-37619660 | MS.gene46957:CDS | 35.0% | |
CTATATGTCACAAATGGGTA+TGG | + | chr3.2:37619646-37619665 | MS.gene46957:CDS | 35.0% | |
GATTAAATTGACGCGAATTC+AGG | - | chr3.2:37619337-37619356 | None:intergenic | 35.0% | |
GCAAACATTAATGATGCTGT+GGG | + | chr3.2:37620356-37620375 | MS.gene46957:CDS | 35.0% | |
GTCATGACTTCTTGTAGATA+AGG | - | chr3.2:37618830-37618849 | None:intergenic | 35.0% | |
GTTGTATGATTTAATCGCAG+TGG | + | chr3.2:37619384-37619403 | MS.gene46957:intron | 35.0% | |
TCAGCACTATATGTCACAAA+TGG | + | chr3.2:37619640-37619659 | MS.gene46957:CDS | 35.0% | |
TCTTATGCAAAATGCTTCTC+AGG | + | chr3.2:37619868-37619887 | MS.gene46957:CDS | 35.0% | |
TGACAAAAAGAGGAAAGTGA+TGG | + | chr3.2:37618846-37618865 | MS.gene46957:CDS | 35.0% | |
TGTTCAGGAATTTCCTATGT+CGG | + | chr3.2:37618381-37618400 | MS.gene46957:CDS | 35.0% | |
! | CAAAGCATCAATGTTAGAAG+AGG | + | chr3.2:37619444-37619463 | MS.gene46957:CDS | 35.0% |
! | CAGGATTTTGCATCTGATTT+TGG | - | chr3.2:37619811-37619830 | None:intergenic | 35.0% |
! | GACAATAGAGAAGTATGTGT+TGG | - | chr3.2:37620398-37620417 | None:intergenic | 35.0% |
! | GATTTTTCTGTTAGGTGATG+TGG | + | chr3.2:37619579-37619598 | MS.gene46957:intron | 35.0% |
! | TCAGGTACTTAGGATTTGTT+TGG | + | chr3.2:37619886-37619905 | MS.gene46957:intron | 35.0% |
! | TGACTATTTTGTACAGCTTG+GGG | - | chr3.2:37620290-37620309 | None:intergenic | 35.0% |
! | TTTTTGTAGGCAATTGCTAG+TGG | + | chr3.2:37619264-37619283 | MS.gene46957:intron | 35.0% |
!! | AATTGCATCGGATTTTGAAG+TGG | - | chr3.2:37619695-37619714 | None:intergenic | 35.0% |
!! | ACATCATTTCTGACTTGTTC+AGG | - | chr3.2:37618703-37618722 | None:intergenic | 35.0% |
!! | ATTTTGGTGCAAATAGGTAC+TGG | + | chr3.2:37617865-37617884 | MS.gene46957:intron | 35.0% |
!! | CATCTGATTTTGGTAGTTGA+AGG | - | chr3.2:37619801-37619820 | None:intergenic | 35.0% |
!! | TCGCTTACAAGAAGTGTTAT+TGG | + | chr3.2:37619138-37619157 | MS.gene46957:intron | 35.0% |
AACAACGATTTGTGTGGATC+CGG | + | chr3.2:37618445-37618464 | MS.gene46957:CDS | 40.0% | |
AACAGGATCAAGATGTAAGC+AGG | + | chr3.2:37618638-37618657 | MS.gene46957:CDS | 40.0% | |
AACATTAATGATGCTGTGGG+TGG | + | chr3.2:37620359-37620378 | MS.gene46957:CDS | 40.0% | |
ACAGGATCAAGATGTAAGCA+GGG | + | chr3.2:37618639-37618658 | MS.gene46957:CDS | 40.0% | |
ACTCATACCTCACAGTAGTA+AGG | + | chr3.2:37619218-37619237 | MS.gene46957:CDS | 40.0% | |
AGGTAAAAAGATAGAGTGCG+CGG | - | chr3.2:37618907-37618926 | None:intergenic | 40.0% | |
ATAGAAGCTCCACAAGTTCA+TGG | - | chr3.2:37618093-37618112 | None:intergenic | 40.0% | |
ATATTGAACACACACCCCAT+AGG | - | chr3.2:37617973-37617992 | None:intergenic | 40.0% | |
ATGAACTTGTGGAGCTTCTA+TGG | + | chr3.2:37618092-37618111 | MS.gene46957:CDS | 40.0% | |
CCAGAAGATGAAGTAAAAGC+AGG | - | chr3.2:37618775-37618794 | None:intergenic | 40.0% | |
CCCAAAATTCCAATCAGGAA+CGG | - | chr3.2:37617917-37617936 | None:intergenic | 40.0% | |
GAGCAATATGCTCGTTACAT+GGG | + | chr3.2:37619839-37619858 | MS.gene46957:CDS | 40.0% | |
GATCCAACAATACCCTATTG+AGG | + | chr3.2:37618258-37618277 | MS.gene46957:CDS | 40.0% | |
GATCTCCTAAATAGTCTCTC+AGG | - | chr3.2:37619942-37619961 | None:intergenic | 40.0% | |
GATGCAAAATCCTGCTCTTT+CGG | + | chr3.2:37619817-37619836 | MS.gene46957:CDS | 40.0% | |
GATGGATGTTGAAGATTCAG+TGG | + | chr3.2:37618864-37618883 | MS.gene46957:CDS | 40.0% | |
GGAAATTCCTGAACAAAAGG+CGG | - | chr3.2:37618376-37618395 | None:intergenic | 40.0% | |
GTTCAAGTGGATCCTCAATA+GGG | - | chr3.2:37618273-37618292 | None:intergenic | 40.0% | |
TAAATCAGCCGTGAGGAAAA+AGG | + | chr3.2:37619002-37619021 | MS.gene46957:CDS | 40.0% | |
TACTTCATCTTCTGGTGGTT+CGG | + | chr3.2:37618780-37618799 | MS.gene46957:CDS | 40.0% | |
TCACTCCCAAAATTCCAATC+AGG | - | chr3.2:37617922-37617941 | None:intergenic | 40.0% | |
TGACAAACCTTACTACTGTG+AGG | - | chr3.2:37619228-37619247 | None:intergenic | 40.0% | |
TGCTTACATCTTGATCCTGT+TGG | - | chr3.2:37618639-37618658 | None:intergenic | 40.0% | |
TGTTCAAGTGGATCCTCAAT+AGG | - | chr3.2:37618274-37618293 | None:intergenic | 40.0% | |
TTCTGTTAGGTGATGTGGAT+GGG | + | chr3.2:37619584-37619603 | MS.gene46957:intron | 40.0% | |
TTGAAAGACTCGACGTTACA+AGG | - | chr3.2:37618331-37618350 | None:intergenic | 40.0% | |
TTTCTGTTAGGTGATGTGGA+TGG | + | chr3.2:37619583-37619602 | MS.gene46957:intron | 40.0% | |
! | ACCGTTCCTGATTGGAATTT+TGG | + | chr3.2:37617913-37617932 | MS.gene46957:CDS | 40.0% |
! | ACGAGCCAAAATCCTGTTTT+AGG | + | chr3.2:37619773-37619792 | MS.gene46957:CDS | 40.0% |
! | AGGCACCTAAAACAGGATTT+TGG | - | chr3.2:37619781-37619800 | None:intergenic | 40.0% |
! | CCGTTCCTGATTGGAATTTT+GGG | + | chr3.2:37617914-37617933 | MS.gene46957:CDS | 40.0% |
! | GCTTTTACTTCATCTTCTGG+TGG | + | chr3.2:37618775-37618794 | MS.gene46957:CDS | 40.0% |
! | GGAACATGATGATGAAACCT+CGG | - | chr3.2:37618409-37618428 | None:intergenic | 40.0% |
! | TACAAAACCGCCTTTTGTTC+AGG | + | chr3.2:37618366-37618385 | MS.gene46957:CDS | 40.0% |
!! | AAAGGCGGTTTTGTATTCGT+CGG | - | chr3.2:37618361-37618380 | None:intergenic | 40.0% |
!! | ACAGTTGGTTCGAGTTATTG+CGG | + | chr3.2:37618601-37618620 | MS.gene46957:CDS | 40.0% |
!! | ATGTTTGCTGTTCCACTCAT+TGG | - | chr3.2:37620344-37620363 | None:intergenic | 40.0% |
!! | ATTTCTGACTTGTTCAGGCT+CGG | - | chr3.2:37618698-37618717 | None:intergenic | 40.0% |
!! | CCTGCTTTTACTTCATCTTC+TGG | + | chr3.2:37618772-37618791 | MS.gene46957:CDS | 40.0% |
!! | GACATATAGTGCTGATATCC+CGG | - | chr3.2:37619635-37619654 | None:intergenic | 40.0% |
!! | GATCCTCAATAGGGTATTGT+TGG | - | chr3.2:37618264-37618283 | None:intergenic | 40.0% |
!! | TAGTTGAAGGCACCTAAAAC+AGG | - | chr3.2:37619788-37619807 | None:intergenic | 40.0% |
!!! | GATTTTGGCTCGTTAATGTC+TGG | - | chr3.2:37619766-37619785 | None:intergenic | 40.0% |
!!! | TTTTGAAGTGGAGGAAACGA+AGG | - | chr3.2:37619683-37619702 | None:intergenic | 40.0% |
AAAGACTCGACGTTACAAGG+TGG | - | chr3.2:37618328-37618347 | None:intergenic | 45.0% | |
AATAGCAGTGGACCAATGAG+TGG | + | chr3.2:37620329-37620348 | MS.gene46957:CDS | 45.0% | |
ACAATTCCTCGGCATGAGAA+TGG | + | chr3.2:37618730-37618749 | MS.gene46957:CDS | 45.0% | |
ACTTCATCTTCTGGTGGTTC+GGG | + | chr3.2:37618781-37618800 | MS.gene46957:CDS | 45.0% | |
AGATTCAGTGGAACAAAGCG+AGG | + | chr3.2:37618876-37618895 | MS.gene46957:CDS | 45.0% | |
ATTGGTCCACTGCTATTGCT+GGG | - | chr3.2:37620326-37620345 | None:intergenic | 45.0% | |
CAATTCCTCGGCATGAGAAT+GGG | + | chr3.2:37618731-37618750 | MS.gene46957:CDS | 45.0% | |
CAGAACTTAAATCAGCCGTG+AGG | + | chr3.2:37618995-37619014 | MS.gene46957:CDS | 45.0% | |
CATCTTGATCCTGTTGGACT+TGG | - | chr3.2:37618633-37618652 | None:intergenic | 45.0% | |
GAATGGGAAATCGGAGATGT+TGG | + | chr3.2:37618747-37618766 | MS.gene46957:CDS | 45.0% | |
GGAGCAATATGCTCGTTACA+TGG | + | chr3.2:37619838-37619857 | MS.gene46957:CDS | 45.0% | |
GGCATTCTCGGTAATTGCAT+CGG | - | chr3.2:37619707-37619726 | None:intergenic | 45.0% | |
TCGGCATGAGAATGGGAAAT+CGG | + | chr3.2:37618738-37618757 | MS.gene46957:CDS | 45.0% | |
TGAACAACACCGTTCCTGAT+TGG | + | chr3.2:37617905-37617924 | MS.gene46957:CDS | 45.0% | |
TGATATCCCGGTAGCATCAT+CGG | - | chr3.2:37619623-37619642 | None:intergenic | 45.0% | |
TGGCTCGTTAATGTCTGGTT+TGG | - | chr3.2:37619761-37619780 | None:intergenic | 45.0% | |
TGGTGTCTGACAGGAAGAAA+CGG | - | chr3.2:37619741-37619760 | None:intergenic | 45.0% | |
! | CTGAGATGCCTTTTTCCTCA+CGG | - | chr3.2:37619013-37619032 | None:intergenic | 45.0% |
! | GTAAGCAGGGTATCAAGCAA+CGG | + | chr3.2:37618652-37618671 | MS.gene46957:CDS | 45.0% |
!! | GGTGCAAATAGGTACTGGTT+TGG | + | chr3.2:37617870-37617889 | MS.gene46957:intron | 45.0% |
!! | TGAGGAAAAAGGCATCTCAG+CGG | + | chr3.2:37619013-37619032 | MS.gene46957:CDS | 45.0% |
!!! | TGCATCGGATTTTGAAGTGG+AGG | - | chr3.2:37619692-37619711 | None:intergenic | 45.0% |
ATGACACCGATGATGCTACC+GGG | + | chr3.2:37619614-37619633 | MS.gene46957:CDS | 50.0% | |
ATTCCACCCAGCAATAGCAG+TGG | + | chr3.2:37620317-37620336 | MS.gene46957:CDS | 50.0% | |
CATGACACCGATGATGCTAC+CGG | + | chr3.2:37619613-37619632 | MS.gene46957:CDS | 50.0% | |
CATTGGTCCACTGCTATTGC+TGG | - | chr3.2:37620327-37620346 | None:intergenic | 50.0% | |
GAGTGTTCGACGATGACAGT+TGG | + | chr3.2:37618586-37618605 | MS.gene46957:CDS | 50.0% | |
GATGCTGTGGGTGGCAAAAT+GGG | + | chr3.2:37620368-37620387 | MS.gene46957:CDS | 50.0% | |
GATTATGCACTTCAGCAGCG+CGG | - | chr3.2:37619059-37619078 | None:intergenic | 50.0% | |
GATTTCCCATTCTCATGCCG+AGG | - | chr3.2:37618739-37618758 | None:intergenic | 50.0% | |
GCAATTACCGAGAATGCCTC+TGG | + | chr3.2:37619709-37619728 | MS.gene46957:CDS | 50.0% | |
GCATATTGCTCCGAAAGAGC+AGG | - | chr3.2:37619830-37619849 | None:intergenic | 50.0% | |
GGGTATCAAGCAACGGTGTT+TGG | + | chr3.2:37618659-37618678 | MS.gene46957:CDS | 50.0% | |
GTCTGACAGGAAGAAACGGA+CGG | - | chr3.2:37619737-37619756 | None:intergenic | 50.0% | |
GTGGAGCTTCTATGGCAGAA+TGG | + | chr3.2:37618100-37618119 | MS.gene46957:CDS | 50.0% | |
TAGGTGATGTGGATGGGATC+TGG | + | chr3.2:37619590-37619609 | MS.gene46957:intron | 50.0% | |
TGATGCTGTGGGTGGCAAAA+TGG | + | chr3.2:37620367-37620386 | MS.gene46957:CDS | 50.0% | |
!! | AAAAAGGCATCTCAGCGGTC+AGG | + | chr3.2:37619018-37619037 | MS.gene46957:CDS | 50.0% |
!! | AATTTCCTATGTCGGCTCCG+AGG | + | chr3.2:37618389-37618408 | MS.gene46957:CDS | 50.0% |
!! | TGTCTGGTTTGGTGTCTGAC+AGG | - | chr3.2:37619750-37619769 | None:intergenic | 50.0% |
CAGGCTGGACCATGAACTTG+TGG | + | chr3.2:37618081-37618100 | MS.gene46957:intron | 55.0% | |
CGATTTGTGTGGATCCGGCA+AGG | + | chr3.2:37618450-37618469 | MS.gene46957:CDS | 55.0% | |
CGGAAGCAACCAAGTCCAAC+AGG | + | chr3.2:37618621-37618640 | MS.gene46957:CDS | 55.0% | |
CTGTGGGTGGCAAAATGGGT+AGG | + | chr3.2:37620372-37620391 | MS.gene46957:intron | 55.0% | |
GAAGAAACGGACGGATCCAG+AGG | - | chr3.2:37619728-37619747 | None:intergenic | 55.0% | |
TGAAACCTCGGAGCCGACAT+AGG | - | chr3.2:37618397-37618416 | None:intergenic | 55.0% | |
! | GGTGGTTCGGGAAGTAGTCT+TGG | + | chr3.2:37618793-37618812 | MS.gene46957:CDS | 55.0% |
!! | GACGGATCCAGAGGCATTCT+CGG | - | chr3.2:37619719-37619738 | None:intergenic | 55.0% |
GGCATCTCAGCGGTCAGGTT+CGG | + | chr3.2:37619023-37619042 | MS.gene46957:CDS | 60.0% | |
GGTCCACTGCTATTGCTGGG+TGG | - | chr3.2:37620323-37620342 | None:intergenic | 60.0% | |
! | AGCGGTCAGGTTCGGCTCGT+AGG | + | chr3.2:37619031-37619050 | MS.gene46957:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 37617441 | 37620571 | 37617441 | ID=MS.gene46957 |
chr3.2 | mRNA | 37617441 | 37620571 | 37617441 | ID=MS.gene46957.t1;Parent=MS.gene46957 |
chr3.2 | exon | 37617441 | 37617453 | 37617441 | ID=MS.gene46957.t1.exon1;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37617441 | 37617453 | 37617441 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37617881 | 37617977 | 37617881 | ID=MS.gene46957.t1.exon2;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37617881 | 37617977 | 37617881 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37618084 | 37618897 | 37618084 | ID=MS.gene46957.t1.exon3;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37618084 | 37618897 | 37618084 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37618991 | 37619089 | 37618991 | ID=MS.gene46957.t1.exon4;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37618991 | 37619089 | 37618991 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37619174 | 37619239 | 37619174 | ID=MS.gene46957.t1.exon5;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37619174 | 37619239 | 37619174 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37619439 | 37619504 | 37619439 | ID=MS.gene46957.t1.exon6;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37619439 | 37619504 | 37619439 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37619593 | 37619889 | 37619593 | ID=MS.gene46957.t1.exon7;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37619593 | 37619889 | 37619593 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37620263 | 37620389 | 37620263 | ID=MS.gene46957.t1.exon8;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37620263 | 37620389 | 37620263 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
chr3.2 | exon | 37620567 | 37620571 | 37620567 | ID=MS.gene46957.t1.exon9;Parent=MS.gene46957.t1 |
chr3.2 | CDS | 37620567 | 37620571 | 37620567 | ID=cds.MS.gene46957.t1;Parent=MS.gene46957.t1 |
Gene Sequence |
Protein sequence |