AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22222


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22222.t1 MTR_3g449770 95.146 515 21 1 1 515 1 511 0.0 989
MS.gene22222.t1 MTR_1g069155 33.333 543 266 23 1 475 1 515 2.58e-52 186
MS.gene22222.t1 MTR_7g099540 45.532 235 96 6 262 468 202 432 6.07e-44 162
MS.gene22222.t1 MTR_7g099540 44.398 241 96 7 262 468 202 438 1.74e-41 155
MS.gene22222.t1 MTR_1g084980 58.333 144 53 4 253 391 402 543 4.19e-35 140
MS.gene22222.t1 MTR_7g111320 36.424 302 136 11 152 405 245 538 1.10e-28 120
MS.gene22222.t1 MTR_1g019240 58.000 100 38 2 291 388 65 162 4.64e-27 110
MS.gene22222.t1 MTR_7g110810 49.107 112 49 3 287 390 173 284 3.49e-23 101
MS.gene22222.t1 MTR_5g017040 68.571 70 20 1 322 391 114 181 4.49e-22 97.8
MS.gene22222.t1 MTR_1g084980 49.138 116 55 2 253 366 402 515 9.19e-18 86.7
MS.gene22222.t1 MTR_4g131160 57.143 63 27 0 315 377 198 260 2.87e-17 84.3
MS.gene22222.t1 MTR_4g131160 57.143 63 27 0 315 377 201 263 3.27e-17 84.0
MS.gene22222.t1 MTR_1g080890 53.968 63 29 0 315 377 195 257 1.35e-15 78.6
MS.gene22222.t1 MTR_5g005110 44.304 79 37 2 308 379 217 295 1.33e-13 72.4
MS.gene22222.t1 MTR_1g106470 37.500 88 45 2 300 377 178 265 2.17e-12 68.2
MS.gene22222.t1 MTR_1g017350 39.450 109 61 3 270 377 221 325 5.20e-12 68.2
MS.gene22222.t1 MTR_1g017350 39.450 109 61 3 270 377 221 325 5.21e-12 68.2
MS.gene22222.t1 MTR_1g017350 39.450 109 61 3 270 377 221 325 6.00e-12 68.2
MS.gene22222.t1 MTR_1g017350 39.450 109 61 3 270 377 221 325 6.23e-12 67.8
MS.gene22222.t1 MTR_3g498825 47.945 73 36 2 315 385 149 221 6.48e-12 67.4
MS.gene22222.t1 MTR_5g048860 51.562 64 30 1 315 377 367 430 8.58e-12 67.8
MS.gene22222.t1 MTR_1g106480 54.000 50 21 1 330 377 86 135 8.76e-12 63.9
MS.gene22222.t1 MTR_3g103030 34.694 98 51 3 315 407 231 320 9.61e-12 66.6
MS.gene22222.t1 MTR_7g053410 50.000 64 31 1 315 377 319 382 1.57e-11 67.0
MS.gene22222.t1 MTR_7g053410 50.000 64 31 1 315 377 319 382 1.67e-11 67.0
MS.gene22222.t1 MTR_3g116770 50.000 64 31 1 315 377 193 256 2.21e-11 66.2
MS.gene22222.t1 MTR_3g116770 50.000 64 31 1 315 377 193 256 2.22e-11 66.2
MS.gene22222.t1 MTR_1g018090 44.118 68 33 1 315 377 276 343 2.59e-11 65.9
MS.gene22222.t1 MTR_8g099880 35.000 120 70 5 315 432 147 260 2.81e-11 65.1
MS.gene22222.t1 MTR_8g012290 50.000 64 31 1 315 377 293 356 3.05e-11 66.2
MS.gene22222.t1 MTR_8g012290 50.000 64 31 1 315 377 293 356 3.07e-11 66.2
MS.gene22222.t1 MTR_8g065740 50.000 64 31 1 315 377 307 370 4.50e-11 65.5
MS.gene22222.t1 MTR_1g059270 31.132 106 71 2 315 418 162 267 5.02e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22222.t1 AT2G43010 35.842 505 223 18 8 498 6 423 3.56e-60 204
MS.gene22222.t1 AT2G43010 35.644 505 226 19 8 498 6 425 3.09e-58 199
MS.gene22222.t1 AT2G43010 35.503 507 224 19 8 498 13 432 4.59e-58 199
MS.gene22222.t1 AT2G43010 35.842 505 225 20 8 498 48 467 1.41e-57 199
MS.gene22222.t1 AT2G43010 36.117 479 203 18 8 472 6 395 5.82e-55 190
MS.gene22222.t1 AT2G20180 35.828 441 192 17 1 410 1 381 3.46e-45 165
MS.gene22222.t1 AT2G20180 35.828 441 192 17 1 410 1 381 3.46e-45 165
MS.gene22222.t1 AT2G20180 35.828 441 192 17 1 410 1 381 3.46e-45 165
MS.gene22222.t1 AT2G20180 35.828 441 192 17 1 410 1 381 3.46e-45 165
MS.gene22222.t1 AT3G59060 43.844 333 116 14 195 497 146 437 2.57e-44 162
MS.gene22222.t1 AT3G59060 43.844 333 116 14 195 497 146 437 2.57e-44 162
MS.gene22222.t1 AT3G59060 43.844 333 116 14 195 497 146 437 2.57e-44 162
MS.gene22222.t1 AT3G59060 44.109 331 116 14 195 497 146 435 5.80e-44 161
MS.gene22222.t1 AT2G20180 35.250 400 178 17 1 377 1 342 1.65e-39 147
MS.gene22222.t1 AT2G20180 36.723 354 150 12 74 410 14 310 1.35e-37 143
MS.gene22222.t1 AT2G20180 36.723 354 150 12 74 410 14 310 1.35e-37 143
MS.gene22222.t1 AT2G20180 36.723 354 150 12 74 410 14 310 1.35e-37 143
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT1G09530 33.103 435 198 19 19 392 18 420 4.28e-36 141
MS.gene22222.t1 AT4G28800 28.753 473 221 17 27 463 19 411 1.15e-28 119
MS.gene22222.t1 AT4G28800 28.541 473 216 18 27 463 31 417 1.01e-26 113
MS.gene22222.t1 AT5G67110 48.529 136 48 3 254 387 48 163 2.69e-26 106
MS.gene22222.t1 AT4G28790 29.340 409 213 16 20 408 18 370 9.53e-26 109
MS.gene22222.t1 AT4G28815 40.217 184 75 8 301 473 53 212 4.46e-25 103
MS.gene22222.t1 AT4G36930 73.611 72 17 1 319 388 197 268 5.71e-25 107
MS.gene22222.t1 AT4G28815 42.391 184 71 10 301 473 129 288 8.45e-25 105
MS.gene22222.t1 AT2G46970 41.379 174 81 7 254 414 133 298 2.48e-24 105
MS.gene22222.t1 AT2G46970 41.379 174 81 7 254 414 142 307 2.59e-24 105
MS.gene22222.t1 AT2G46970 41.520 171 79 7 257 414 167 329 3.51e-24 105
MS.gene22222.t1 AT4G00050 53.271 107 39 3 273 375 68 167 2.31e-22 97.8
MS.gene22222.t1 AT4G00050 53.271 107 39 3 273 375 170 269 5.51e-22 98.2
MS.gene22222.t1 AT4G00050 53.271 107 39 3 273 375 170 269 6.72e-22 98.2
MS.gene22222.t1 AT4G28790 27.838 370 195 13 20 373 18 331 8.64e-19 88.2
MS.gene22222.t1 AT2G24260 58.730 63 26 0 315 377 37 99 1.13e-18 85.9
MS.gene22222.t1 AT2G24260 58.730 63 26 0 315 377 140 202 4.90e-18 85.9
MS.gene22222.t1 AT5G58010 54.054 74 31 1 304 377 93 163 5.51e-18 85.1
MS.gene22222.t1 AT4G30980 57.143 63 27 0 315 377 132 194 1.33e-17 84.0
MS.gene22222.t1 AT4G30980 57.143 63 27 0 315 377 180 242 3.69e-17 83.6
MS.gene22222.t1 AT3G62090 49.474 95 45 3 308 400 160 253 7.58e-17 82.4
MS.gene22222.t1 AT3G62090 49.474 95 45 3 308 400 177 270 9.42e-17 82.4
MS.gene22222.t1 AT4G28811 36.992 246 123 6 248 474 295 527 9.85e-17 83.6
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 103 267 1.54e-14 75.5
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 154 318 1.76e-14 75.9
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 154 318 1.76e-14 75.9
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 154 318 1.76e-14 75.9
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 154 318 1.76e-14 75.9
MS.gene22222.t1 AT1G26260 33.333 165 92 5 260 406 132 296 2.11e-14 75.5
MS.gene22222.t1 AT1G68240 38.710 124 67 4 315 432 63 183 1.25e-13 69.7
MS.gene22222.t1 AT5G61270 46.078 102 53 2 287 387 135 235 2.60e-13 72.0
MS.gene22222.t1 AT5G61270 46.078 102 53 2 287 387 47 147 2.70e-13 70.9
MS.gene22222.t1 AT5G61270 46.078 102 53 2 287 387 47 147 2.70e-13 70.9
MS.gene22222.t1 AT5G43175 40.789 76 40 1 307 377 126 201 4.78e-13 68.9
MS.gene22222.t1 AT1G68240 39.091 110 61 3 315 418 63 172 5.02e-13 67.8
MS.gene22222.t1 AT4G33880 35.652 115 57 4 296 403 247 351 5.10e-13 70.9
MS.gene22222.t1 AT1G02340 36.667 120 52 3 281 400 113 208 6.11e-13 70.1
MS.gene22222.t1 AT1G02340 36.667 120 52 3 281 400 106 201 6.80e-13 69.7
MS.gene22222.t1 AT2G14760 38.710 93 49 2 290 377 217 306 1.42e-12 69.3
MS.gene22222.t1 AT1G27740 36.449 107 59 3 291 391 148 251 1.75e-12 68.2
MS.gene22222.t1 AT5G50915 29.358 218 100 8 238 415 53 256 2.01e-12 68.2
MS.gene22222.t1 AT5G50915 29.358 218 100 8 238 415 53 256 2.01e-12 68.2
MS.gene22222.t1 AT5G50915 29.358 218 100 8 238 415 53 256 3.01e-12 67.4
MS.gene22222.t1 AT5G50915 29.358 218 100 8 238 415 53 256 3.01e-12 67.4
MS.gene22222.t1 AT1G68920 36.170 141 79 6 315 446 305 443 5.22e-12 68.6
MS.gene22222.t1 AT1G68920 36.170 141 79 6 315 446 305 443 5.22e-12 68.6
MS.gene22222.t1 AT1G68920 36.170 141 79 6 315 446 305 443 5.22e-12 68.6
MS.gene22222.t1 AT1G68920 36.170 141 79 6 315 446 304 442 5.26e-12 68.6
MS.gene22222.t1 AT2G18300 30.808 198 113 7 274 448 129 325 1.21e-11 66.6
MS.gene22222.t1 AT3G23690 33.333 144 87 4 239 377 117 256 1.25e-11 66.6
MS.gene22222.t1 AT2G14760 42.647 68 34 1 315 377 252 319 1.40e-11 66.2
MS.gene22222.t1 AT2G18300 30.808 198 113 7 274 448 129 325 1.42e-11 66.2
MS.gene22222.t1 AT4G34530 48.438 64 32 1 315 377 174 237 1.84e-11 65.9
MS.gene22222.t1 AT3G07340 39.216 102 43 3 292 377 225 323 2.07e-11 66.6
MS.gene22222.t1 AT3G07340 39.216 102 43 3 292 377 225 323 2.50e-11 66.2
MS.gene22222.t1 AT5G48560 50.000 64 31 1 315 377 303 366 4.47e-11 65.5
MS.gene22222.t1 AT5G67110 40.367 109 44 3 254 362 48 135 4.91e-11 61.6
MS.gene22222.t1 AT5G48560 50.000 64 31 1 315 377 303 366 5.14e-11 65.5
MS.gene22222.t1 AT4G36540 36.697 109 60 3 277 377 99 206 6.70e-11 63.9
MS.gene22222.t1 AT4G36540 36.697 109 60 3 277 377 99 206 7.19e-11 63.9
MS.gene22222.t1 AT1G10120 48.438 64 32 1 315 377 208 271 7.40e-11 64.3
MS.gene22222.t1 AT1G10120 48.438 64 32 1 315 377 208 271 7.40e-11 64.3
MS.gene22222.t1 AT5G67110 37.500 136 41 4 254 387 48 141 7.74e-11 62.0

Find 105 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCGTTCCTGATTGGAATTT+TGG 0.193756 3.4:+39973610 MS.gene22222:CDS
CAACTTGTTTCTTATTTGTT+TGG 0.270251 3.4:-39973838 None:intergenic
TACTTCATCTTCTGGTGGTT+CGG 0.273371 3.4:+39974477 MS.gene22222:CDS
TGATGCTGTGGGTGGCAAAA+TGG 0.294348 3.4:+39976063 MS.gene22222:CDS
CATTGGTCCACTGCTATTGC+TGG 0.300560 3.4:-39976020 None:intergenic
AGGCACCTAAAACAGGATTT+TGG 0.303664 3.4:-39975474 None:intergenic
ATCACTTCAGTTACAACTTC+AGG 0.334793 3.4:+39975179 MS.gene22222:CDS
GATGCAAAATCCTGCTCTTT+CGG 0.342576 3.4:+39975513 MS.gene22222:CDS
GGGTATCAAGCAACGGTGTT+TGG 0.343568 3.4:+39974356 MS.gene22222:CDS
ATGAACTTGTGGAGCTTCTA+TGG 0.349007 3.4:+39973789 MS.gene22222:CDS
GAATGGGAAATCGGAGATAT+TGG 0.349761 3.4:+39974444 MS.gene22222:CDS
CATCTTGATCCTGTTGGACT+TGG 0.357855 3.4:-39974327 None:intergenic
ACTTCATCTTCTGGTGGTTC+GGG 0.366507 3.4:+39974478 MS.gene22222:CDS
AAGATGATGAAACTGTTTCA+TGG 0.378684 3.4:+39973933 MS.gene22222:CDS
TGCTCAAGTGGATCCTCAAT+AGG 0.379161 3.4:-39973968 None:intergenic
CCTATGTCGGCTCCGAGGTT+TGG 0.394685 3.4:+39974091 MS.gene22222:CDS
ATGTTTGCTGTTCCACTCAT+TGG 0.397921 3.4:-39976037 None:intergenic
TGCTTACATCTTGATCCTGT+TGG 0.402600 3.4:-39974333 None:intergenic
GACGGATCCAGAGGCATTCT+CGG 0.403301 3.4:-39975412 None:intergenic
GTCATGACTTCTTGTAGATA+AGG 0.410497 3.4:-39974524 None:intergenic
TCAGCACTATATGTCACAAA+TGG 0.421098 3.4:+39975336 MS.gene22222:CDS
ATAGAAGCTCCACAAGTTCA+TGG 0.431688 3.4:-39973787 None:intergenic
GAACATAATTCTTGCTCAAG+TGG 0.436045 3.4:-39973980 None:intergenic
AACAATGATTTGTGTGGATC+CGG 0.436831 3.4:+39974142 MS.gene22222:CDS
TCTTATGCAAAATGCTTCTC+AGG 0.438287 3.4:+39975564 MS.gene22222:CDS
ACAATTCCTCGGCATGAGAA+TGG 0.443028 3.4:+39974427 MS.gene22222:CDS
TGAACAACACCGTTCCTGAT+TGG 0.444912 3.4:+39973602 MS.gene22222:CDS
CGGAAGCAACCAAGTCCAAC+AGG 0.451058 3.4:+39974318 MS.gene22222:CDS
CCATATCTGTACATATTCAT+TGG 0.451704 3.4:-39975959 None:intergenic
TGGCTCGTTAATGTCTGGTT+TGG 0.458380 3.4:-39975454 None:intergenic
TAGTTGAAGGCACCTAAAAC+AGG 0.459214 3.4:-39975481 None:intergenic
CTATATGTCACAAATGGGTA+TGG 0.459276 3.4:+39975342 MS.gene22222:CDS
GGAGCAATATGCTCGTTACA+TGG 0.460185 3.4:+39975534 MS.gene22222:CDS
GCTCAAGTGGATCCTCAATA+GGG 0.461133 3.4:-39973967 None:intergenic
ATAGGAAATTCCTGAACAAA+AGG 0.464065 3.4:-39974073 None:intergenic
CAATTCCTCGGCATGAGAAT+GGG 0.468759 3.4:+39974428 MS.gene22222:CDS
AGAAAAGTTTACAACCTTGC+CGG 0.469128 3.4:-39974161 None:intergenic
AACAGGATCAAGATGTAAGC+AGG 0.473432 3.4:+39974335 MS.gene22222:CDS
TCGGCATGAGAATGGGAAAT+CGG 0.473920 3.4:+39974435 MS.gene22222:CDS
GATCCTCAATAGGGTATTGT+TGG 0.475150 3.4:-39973958 None:intergenic
TTCTGTTAGGTGATGTGGAT+GGG 0.477428 3.4:+39975280 MS.gene22222:intron
TAGGTGATGTGGATGGGATC+TGG 0.479810 3.4:+39975286 MS.gene22222:intron
CAATCAAAAGAAGCAACCTA+TGG 0.480712 3.4:+39973651 MS.gene22222:CDS
GCAATTACCGAGAATGCCTC+TGG 0.483577 3.4:+39975405 MS.gene22222:CDS
TGTTCAGGAATTTCCTATGT+CGG 0.485624 3.4:+39974078 MS.gene22222:CDS
CCAATGAATATGTACAGATA+TGG 0.491789 3.4:+39975959 MS.gene22222:CDS
CATGACACCGATGATGCTAC+CGG 0.496261 3.4:+39975309 MS.gene22222:CDS
GTAGATGCTAAAGTAACATT+CGG 0.496431 3.4:-39974199 None:intergenic
TTTCTGTTAGGTGATGTGGA+TGG 0.500303 3.4:+39975279 MS.gene22222:intron
GATGCTGTGGGTGGCAAAAT+GGG 0.501876 3.4:+39976064 MS.gene22222:CDS
GGTGGTTCGGGAAGTAGTCT+TGG 0.502929 3.4:+39974490 MS.gene22222:CDS
TCACTCCCAAAATTCCAATC+AGG 0.503469 3.4:-39973616 None:intergenic
GGCGTCTCAGCGGTCAGGGT+CGG 0.510720 3.4:+39974720 MS.gene22222:CDS
TTGAAAGACTCGACATTACA+AGG 0.516339 3.4:-39974025 None:intergenic
CCAAACCTCGGAGCCGACAT+AGG 0.519849 3.4:-39974091 None:intergenic
AATCAAAAGAAGCAACCTAT+GGG 0.522003 3.4:+39973652 MS.gene22222:CDS
ACTCATACCTCACAGTAGTA+AGG 0.524016 3.4:+39974915 MS.gene22222:CDS
CAGCACTATATGTCACAAAT+GGG 0.528954 3.4:+39975337 MS.gene22222:CDS
AGTGCATAATCTTTCAGAAA+GGG 0.530854 3.4:+39974765 MS.gene22222:CDS
GACATATAGTGCTGATATCC+CGG 0.534372 3.4:-39975328 None:intergenic
CAAAGCATCAATGTTAGAAG+AGG 0.538478 3.4:+39975140 MS.gene22222:CDS
TGTCTGGTTTGGTGTCTGAC+AGG 0.541123 3.4:-39975443 None:intergenic
GGCATTCTCGGTAATTGCAT+CGG 0.543563 3.4:-39975400 None:intergenic
TGATATCCCGGTAGCATCAT+CGG 0.547358 3.4:-39975316 None:intergenic
GCATATTGCTCCGAAAGAGC+AGG 0.550353 3.4:-39975523 None:intergenic
AGCGGTCAGGGTCGGCTCGT+AGG 0.550460 3.4:+39974728 MS.gene22222:CDS
TGGTGTCTGACAGGAAGAAA+CGG 0.568009 3.4:-39975434 None:intergenic
ATTGGTCCACTGCTATTGCT+GGG 0.572900 3.4:-39976019 None:intergenic
GTGGAGCTTCTATGGCAGAA+TGG 0.575038 3.4:+39973797 MS.gene22222:CDS
CAAAGAAACAATGATTTGTG+TGG 0.577996 3.4:+39974136 MS.gene22222:CDS
CCAGAAGATGAAGTAAAAGC+AGG 0.586941 3.4:-39974469 None:intergenic
GATCCAACAATACCCTATTG+AGG 0.587994 3.4:+39973955 MS.gene22222:CDS
GGAAATTCCTGAACAAAAGG+AGG 0.590869 3.4:-39974070 None:intergenic
AAGTGCATAATCTTTCAGAA+AGG 0.591388 3.4:+39974764 MS.gene22222:CDS
TATATGTCACAAATGGGTAT+GGG 0.594345 3.4:+39975343 MS.gene22222:CDS
GTTACTTTAGCATCTACTAA+CGG 0.594559 3.4:+39974205 MS.gene22222:CDS
CCCAAAATTCCAATCAGGAA+CGG 0.594898 3.4:-39973611 None:intergenic
AAAAGGCGTCTCAGCGGTCA+GGG 0.594986 3.4:+39974716 MS.gene22222:CDS
ATGACACCGATGATGCTACC+GGG 0.598634 3.4:+39975310 MS.gene22222:CDS
GAGTGTTCAACGATGACAGT+TGG 0.600184 3.4:+39974283 MS.gene22222:CDS
AGCAAACATTAATGATGCTG+TGG 0.601820 3.4:+39976051 MS.gene22222:CDS
GATTTCCCATTCTCATGCCG+AGG 0.602580 3.4:-39974433 None:intergenic
GATGGATGTTGAAGATTCAG+TGG 0.609243 3.4:+39974561 MS.gene22222:CDS
GAGCAATATGCTCGTTACAT+GGG 0.614005 3.4:+39975535 MS.gene22222:CDS
ATGTTCAGAGAACAATTCCT+CGG 0.618230 3.4:+39974416 MS.gene22222:CDS
CAGGTTGGACCATGAACTTG+TGG 0.640181 3.4:+39973778 MS.gene22222:intron
ATATTGAACACACACCCCAT+AGG 0.642122 3.4:-39973667 None:intergenic
ACAGGATCAAGATGTAAGCA+GGG 0.649737 3.4:+39974336 MS.gene22222:CDS
AGATTCAGTGGAACAAAGCG+AGG 0.656069 3.4:+39974573 MS.gene22222:CDS
GTAAGCAGGGTATCAAGCAA+CGG 0.657240 3.4:+39974349 MS.gene22222:CDS
TGATTTGTGTGGATCCGGCA+AGG 0.657395 3.4:+39974147 MS.gene22222:CDS
ACAGTTGGTTCGAGTTATTG+CGG 0.658618 3.4:+39974298 MS.gene22222:CDS
GAAGAAACGGACGGATCCAG+AGG 0.660505 3.4:-39975421 None:intergenic
AACATTAATGATGCTGTGGG+TGG 0.661408 3.4:+39976055 MS.gene22222:CDS
GTCTGACAGGAAGAAACGGA+CGG 0.668045 3.4:-39975430 None:intergenic
AATAGCAGTGGACCAATGAG+TGG 0.668226 3.4:+39976025 MS.gene22222:CDS
GGTCCACTGCTATTGCTGGG+TGG 0.669356 3.4:-39976016 None:intergenic
ATTCCACCCAGCAATAGCAG+TGG 0.670400 3.4:+39976013 MS.gene22222:CDS
AATTTCCTATGTCGGCTCCG+AGG 0.681257 3.4:+39974086 MS.gene22222:CDS
AGAACATGATGACCAAACCT+CGG 0.687831 3.4:-39974103 None:intergenic
GCAAACATTAATGATGCTGT+GGG 0.698935 3.4:+39976052 MS.gene22222:CDS
ATCAAAAGAAGCAACCTATG+GGG 0.706622 3.4:+39973653 MS.gene22222:CDS
GATTATGCACTTCAGCAGCG+CGG 0.709911 3.4:-39974753 None:intergenic
TGACAAACCTTACTACTGTG+AGG 0.713524 3.4:-39974922 None:intergenic
AAAGACTCGACATTACAAGG+TGG 0.771998 3.4:-39974022 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATATCATTAATTTATAA+GGG - chr3.4:39975884-39975903 None:intergenic 10.0%
!! TAGTTTAATCAAATTTAATT+TGG - chr3.4:39973723-39973742 None:intergenic 10.0%
!! GAATATCATTAATTTATAAG+GGG - chr3.4:39975883-39975902 None:intergenic 15.0%
!! GAGAATATCATTAATTTATA+AGG - chr3.4:39975885-39975904 None:intergenic 15.0%
!!! AAATTTTAGAGACAAAATTA+CGG + chr3.4:39974234-39974253 MS.gene22222:CDS 15.0%
!!! ATTTTTTTGATTTTTCTGTT+AGG + chr3.4:39975267-39975286 MS.gene22222:intron 15.0%
!! TAATATGAGAACAATATTAG+AGG - chr3.4:39976121-39976140 None:intergenic 20.0%
!! TGAAAAACATCTAATTATGA+AGG - chr3.4:39974624-39974643 None:intergenic 20.0%
!! TTGCCTATAAAAAAAAAACA+CGG - chr3.4:39974953-39974972 None:intergenic 20.0%
!!! AAACCGTGTTTTTTTTTTAT+AGG + chr3.4:39974947-39974966 MS.gene22222:intron 20.0%
!!! AATTTTAGAGACAAAATTAC+GGG + chr3.4:39974235-39974254 MS.gene22222:CDS 20.0%
!!! ATTAATTTTACCTTGTATGT+TGG + chr3.4:39975923-39975942 MS.gene22222:intron 20.0%
!!! ATTTTATGGTTTGTGTTAAT+AGG + chr3.4:39974666-39974685 MS.gene22222:intron 20.0%
! AAAAATTCTTTAGCAATGTG+AGG - chr3.4:39975253-39975272 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+TGG - chr3.4:39975687-39975706 None:intergenic 25.0%
!! ACTGTTTTCATGTAAGATAT+AGG - chr3.4:39975744-39975763 None:intergenic 25.0%
!! CAACTTGTTTCTTATTTGTT+TGG - chr3.4:39973841-39973860 None:intergenic 25.0%
!! TAAGTTAGTTTATCCAAACA+GGG + chr3.4:39975840-39975859 MS.gene22222:intron 25.0%
!! TACACTGAGTTATGATTTTA+TGG + chr3.4:39974652-39974671 MS.gene22222:intron 25.0%
!! TATTCTCATGTTTTACTCTA+TGG + chr3.4:39975898-39975917 MS.gene22222:intron 25.0%
!! TTAAGTTAGTTTATCCAAAC+AGG + chr3.4:39975839-39975858 MS.gene22222:intron 25.0%
!! TTTTAAATTTAGACCCTGTT+TGG - chr3.4:39975856-39975875 None:intergenic 25.0%
!!! ACAAAAAATTTGTTAGTAGC+AGG + chr3.4:39974999-39975018 MS.gene22222:intron 25.0%
!!! ATGCAAGAGATTATTTTGTA+TGG - chr3.4:39975220-39975239 None:intergenic 25.0%
!!! TGCTAGTGGTTAATTTTTTA+AGG + chr3.4:39974974-39974993 MS.gene22222:intron 25.0%
!!! TTACTTGTCATTTTGTTTAC+AGG + chr3.4:39976241-39976260 MS.gene22222:intron 25.0%
AAACTATCATGAAGAACTTG+TGG - chr3.4:39975711-39975730 None:intergenic 30.0%
AACCATGTGTTTAACATTAC+AGG + chr3.4:39973759-39973778 MS.gene22222:intron 30.0%
AACCTGTAATGTTAAACACA+TGG - chr3.4:39973764-39973783 None:intergenic 30.0%
AAGATGATGAAACTGTTTCA+TGG + chr3.4:39973933-39973952 MS.gene22222:CDS 30.0%
AAGTGCATAATCTTTCAGAA+AGG + chr3.4:39974764-39974783 MS.gene22222:CDS 30.0%
AATCAAAAGAAGCAACCTAT+GGG + chr3.4:39973652-39973671 MS.gene22222:CDS 30.0%
AGACTATTTAGGAGATCTTA+TGG + chr3.4:39975641-39975660 MS.gene22222:intron 30.0%
AGTGCATAATCTTTCAGAAA+GGG + chr3.4:39974765-39974784 MS.gene22222:CDS 30.0%
ATAATCTTTCAGAAAGGGTA+AGG + chr3.4:39974770-39974789 MS.gene22222:intron 30.0%
ATAGGAAATTCCTGAACAAA+AGG - chr3.4:39974076-39974095 None:intergenic 30.0%
ATGTGTTTAACATTACAGGT+TGG + chr3.4:39973763-39973782 MS.gene22222:intron 30.0%
ATTAAATTGACGCGAATTCA+GGG - chr3.4:39975032-39975051 None:intergenic 30.0%
CCAATGAATATGTACAGATA+TGG + chr3.4:39975959-39975978 MS.gene22222:CDS 30.0%
CCATATCTGTACATATTCAT+TGG - chr3.4:39975962-39975981 None:intergenic 30.0%
GCGATTAAATCATACAACAT+GGG - chr3.4:39975078-39975097 None:intergenic 30.0%
GTAGATGCTAAAGTAACATT+CGG - chr3.4:39974202-39974221 None:intergenic 30.0%
TAATCTTTCAGAAAGGGTAA+GGG + chr3.4:39974771-39974790 MS.gene22222:intron 30.0%
TATATGTCACAAATGGGTAT+GGG + chr3.4:39975343-39975362 MS.gene22222:CDS 30.0%
TGCGATTAAATCATACAACA+TGG - chr3.4:39975079-39975098 None:intergenic 30.0%
TTATTCGTTTATTGATGCAG+AGG + chr3.4:39974851-39974870 MS.gene22222:intron 30.0%
! CAAAGAAACAATGATTTGTG+TGG + chr3.4:39974136-39974155 MS.gene22222:CDS 30.0%
! GTTACTTTAGCATCTACTAA+CGG + chr3.4:39974205-39974224 MS.gene22222:CDS 30.0%
! TTGACTATTTTGTACAGCTT+GGG - chr3.4:39975987-39976006 None:intergenic 30.0%
! TTTGACTATTTTGTACAGCT+TGG - chr3.4:39975988-39976007 None:intergenic 30.0%
! TTTTTATAGGCAATTGCTAG+TGG + chr3.4:39974960-39974979 MS.gene22222:intron 30.0%
!!! ACATCATTTTTGACTTGTTC+AGG - chr3.4:39974400-39974419 None:intergenic 30.0%
AAAATGCTTCTCAGGTACTT+AGG + chr3.4:39975572-39975591 MS.gene22222:intron 35.0%
AAACACCTGAGAGACTATTT+AGG + chr3.4:39975630-39975649 MS.gene22222:intron 35.0%
AGAAAAGTTTACAACCTTGC+CGG - chr3.4:39974164-39974183 None:intergenic 35.0%
AGCAAACATTAATGATGCTG+TGG + chr3.4:39976051-39976070 MS.gene22222:CDS 35.0%
AGGTAAATAGATAGAGACTG+CGG - chr3.4:39974604-39974623 None:intergenic 35.0%
ATCAAAAGAAGCAACCTATG+GGG + chr3.4:39973653-39973672 MS.gene22222:CDS 35.0%
ATCACTTCAGTTACAACTTC+AGG + chr3.4:39975179-39975198 MS.gene22222:CDS 35.0%
ATGTTCAGAGAACAATTCCT+CGG + chr3.4:39974416-39974435 MS.gene22222:CDS 35.0%
CAAAATAGTGCCAACATACA+AGG - chr3.4:39975936-39975955 None:intergenic 35.0%
CAAGAAGTCATGACAAAAAG+AGG + chr3.4:39974533-39974552 MS.gene22222:CDS 35.0%
CAATCAAAAGAAGCAACCTA+TGG + chr3.4:39973651-39973670 MS.gene22222:CDS 35.0%
CAGCACTATATGTCACAAAT+GGG + chr3.4:39975337-39975356 MS.gene22222:CDS 35.0%
CTATATGTCACAAATGGGTA+TGG + chr3.4:39975342-39975361 MS.gene22222:CDS 35.0%
GAACATAATTCTTGCTCAAG+TGG - chr3.4:39973983-39974002 None:intergenic 35.0%
GATTAAATTGACGCGAATTC+AGG - chr3.4:39975033-39975052 None:intergenic 35.0%
GCAAACATTAATGATGCTGT+GGG + chr3.4:39976052-39976071 MS.gene22222:CDS 35.0%
GTCATGACTTCTTGTAGATA+AGG - chr3.4:39974527-39974546 None:intergenic 35.0%
GTTGTATGATTTAATCGCAG+TGG + chr3.4:39975080-39975099 MS.gene22222:intron 35.0%
TAAATCAGCCGTGAGAAAAA+AGG + chr3.4:39974699-39974718 MS.gene22222:CDS 35.0%
TCAGCACTATATGTCACAAA+TGG + chr3.4:39975336-39975355 MS.gene22222:CDS 35.0%
TCTTATGCAAAATGCTTCTC+AGG + chr3.4:39975564-39975583 MS.gene22222:CDS 35.0%
TGACAAAAAGAGGAAAGTGA+TGG + chr3.4:39974543-39974562 MS.gene22222:CDS 35.0%
TGTTCAGGAATTTCCTATGT+CGG + chr3.4:39974078-39974097 MS.gene22222:CDS 35.0%
TTGAAAGACTCGACATTACA+AGG - chr3.4:39974028-39974047 None:intergenic 35.0%
! AACAATGATTTGTGTGGATC+CGG + chr3.4:39974142-39974161 MS.gene22222:CDS 35.0%
! CAAAGCATCAATGTTAGAAG+AGG + chr3.4:39975140-39975159 MS.gene22222:CDS 35.0%
! CAGGATTTTGCATCTGATTT+TGG - chr3.4:39975507-39975526 None:intergenic 35.0%
! CATAGGTTGCTTCTTTTGAT+TGG - chr3.4:39973653-39973672 None:intergenic 35.0%
! GACAATAGAGAAGTATGTGT+TGG - chr3.4:39976094-39976113 None:intergenic 35.0%
! GATTTTTCTGTTAGGTGATG+TGG + chr3.4:39975275-39975294 MS.gene22222:intron 35.0%
! TACAAAACCTCCTTTTGTTC+AGG + chr3.4:39974063-39974082 MS.gene22222:CDS 35.0%
! TCAGGTACTTAGGATTTGTT+TGG + chr3.4:39975582-39975601 MS.gene22222:intron 35.0%
! TGACTATTTTGTACAGCTTG+GGG - chr3.4:39975986-39976005 None:intergenic 35.0%
!! AAAGGAGGTTTTGTATTCGT+CGG - chr3.4:39974058-39974077 None:intergenic 35.0%
!! AATTGCATCGGATTTTGAAG+TGG - chr3.4:39975391-39975410 None:intergenic 35.0%
!! CATCTGATTTTGGTAGTTGA+AGG - chr3.4:39975497-39975516 None:intergenic 35.0%
AAAGACTCGACATTACAAGG+TGG - chr3.4:39974025-39974044 None:intergenic 40.0%
AACAGGATCAAGATGTAAGC+AGG + chr3.4:39974335-39974354 MS.gene22222:CDS 40.0%
AACATTAATGATGCTGTGGG+TGG + chr3.4:39976055-39976074 MS.gene22222:CDS 40.0%
ACAGGATCAAGATGTAAGCA+GGG + chr3.4:39974336-39974355 MS.gene22222:CDS 40.0%
ACTCATACCTCACAGTAGTA+AGG + chr3.4:39974915-39974934 MS.gene22222:CDS 40.0%
AGAACATGATGACCAAACCT+CGG - chr3.4:39974106-39974125 None:intergenic 40.0%
ATAGAAGCTCCACAAGTTCA+TGG - chr3.4:39973790-39973809 None:intergenic 40.0%
ATATTGAACACACACCCCAT+AGG - chr3.4:39973670-39973689 None:intergenic 40.0%
ATGAACTTGTGGAGCTTCTA+TGG + chr3.4:39973789-39973808 MS.gene22222:CDS 40.0%
CCAGAAGATGAAGTAAAAGC+AGG - chr3.4:39974472-39974491 None:intergenic 40.0%
CCCAAAATTCCAATCAGGAA+CGG - chr3.4:39973614-39973633 None:intergenic 40.0%
GAATGGGAAATCGGAGATAT+TGG + chr3.4:39974444-39974463 MS.gene22222:CDS 40.0%
GAGCAATATGCTCGTTACAT+GGG + chr3.4:39975535-39975554 MS.gene22222:CDS 40.0%
GATCCAACAATACCCTATTG+AGG + chr3.4:39973955-39973974 MS.gene22222:CDS 40.0%
GATCTCCTAAATAGTCTCTC+AGG - chr3.4:39975638-39975657 None:intergenic 40.0%
GATGCAAAATCCTGCTCTTT+CGG + chr3.4:39975513-39975532 MS.gene22222:CDS 40.0%
GATGGATGTTGAAGATTCAG+TGG + chr3.4:39974561-39974580 MS.gene22222:CDS 40.0%
GGAAATTCCTGAACAAAAGG+AGG - chr3.4:39974073-39974092 None:intergenic 40.0%
TACTTCATCTTCTGGTGGTT+CGG + chr3.4:39974477-39974496 MS.gene22222:CDS 40.0%
TCACTCCCAAAATTCCAATC+AGG - chr3.4:39973619-39973638 None:intergenic 40.0%
TGACAAACCTTACTACTGTG+AGG - chr3.4:39974925-39974944 None:intergenic 40.0%
TGCTTACATCTTGATCCTGT+TGG - chr3.4:39974336-39974355 None:intergenic 40.0%
TTCTGTTAGGTGATGTGGAT+GGG + chr3.4:39975280-39975299 MS.gene22222:intron 40.0%
TTTCTGTTAGGTGATGTGGA+TGG + chr3.4:39975279-39975298 MS.gene22222:intron 40.0%
! ACCGTTCCTGATTGGAATTT+TGG + chr3.4:39973610-39973629 MS.gene22222:CDS 40.0%
! ACGAGCCAAAATCCTGTTTT+AGG + chr3.4:39975469-39975488 MS.gene22222:CDS 40.0%
! AGGCACCTAAAACAGGATTT+TGG - chr3.4:39975477-39975496 None:intergenic 40.0%
! CCGTTCCTGATTGGAATTTT+GGG + chr3.4:39973611-39973630 MS.gene22222:CDS 40.0%
! GCTTTTACTTCATCTTCTGG+TGG + chr3.4:39974472-39974491 MS.gene22222:CDS 40.0%
!! ACAGTTGGTTCGAGTTATTG+CGG + chr3.4:39974298-39974317 MS.gene22222:CDS 40.0%
!! ATGTTTGCTGTTCCACTCAT+TGG - chr3.4:39976040-39976059 None:intergenic 40.0%
!! CCTGCTTTTACTTCATCTTC+TGG + chr3.4:39974469-39974488 MS.gene22222:CDS 40.0%
!! GACATATAGTGCTGATATCC+CGG - chr3.4:39975331-39975350 None:intergenic 40.0%
!! GATCCTCAATAGGGTATTGT+TGG - chr3.4:39973961-39973980 None:intergenic 40.0%
!! TAGTTGAAGGCACCTAAAAC+AGG - chr3.4:39975484-39975503 None:intergenic 40.0%
!!! GATTTTGGCTCGTTAATGTC+TGG - chr3.4:39975462-39975481 None:intergenic 40.0%
!!! TTTTGAAGTGGAGGAAACGA+AGG - chr3.4:39975379-39975398 None:intergenic 40.0%
AATAGCAGTGGACCAATGAG+TGG + chr3.4:39976025-39976044 MS.gene22222:CDS 45.0%
ACAATTCCTCGGCATGAGAA+TGG + chr3.4:39974427-39974446 MS.gene22222:CDS 45.0%
ACTTCATCTTCTGGTGGTTC+GGG + chr3.4:39974478-39974497 MS.gene22222:CDS 45.0%
AGATTCAGTGGAACAAAGCG+AGG + chr3.4:39974573-39974592 MS.gene22222:CDS 45.0%
ATTGGTCCACTGCTATTGCT+GGG - chr3.4:39976022-39976041 None:intergenic 45.0%
CAATTCCTCGGCATGAGAAT+GGG + chr3.4:39974428-39974447 MS.gene22222:CDS 45.0%
CATCTTGATCCTGTTGGACT+TGG - chr3.4:39974330-39974349 None:intergenic 45.0%
GAGTGTTCAACGATGACAGT+TGG + chr3.4:39974283-39974302 MS.gene22222:CDS 45.0%
GCTCAAGTGGATCCTCAATA+GGG - chr3.4:39973970-39973989 None:intergenic 45.0%
GGAGCAATATGCTCGTTACA+TGG + chr3.4:39975534-39975553 MS.gene22222:CDS 45.0%
GGCATTCTCGGTAATTGCAT+CGG - chr3.4:39975403-39975422 None:intergenic 45.0%
TCGGCATGAGAATGGGAAAT+CGG + chr3.4:39974435-39974454 MS.gene22222:CDS 45.0%
TGAACAACACCGTTCCTGAT+TGG + chr3.4:39973602-39973621 MS.gene22222:CDS 45.0%
TGATATCCCGGTAGCATCAT+CGG - chr3.4:39975319-39975338 None:intergenic 45.0%
TGCTCAAGTGGATCCTCAAT+AGG - chr3.4:39973971-39973990 None:intergenic 45.0%
TGGCTCGTTAATGTCTGGTT+TGG - chr3.4:39975457-39975476 None:intergenic 45.0%
TGGTGTCTGACAGGAAGAAA+CGG - chr3.4:39975437-39975456 None:intergenic 45.0%
! GTAAGCAGGGTATCAAGCAA+CGG + chr3.4:39974349-39974368 MS.gene22222:CDS 45.0%
!! TGAGAAAAAAGGCGTCTCAG+CGG + chr3.4:39974710-39974729 MS.gene22222:CDS 45.0%
!!! CTGAGACGCCTTTTTTCTCA+CGG - chr3.4:39974710-39974729 None:intergenic 45.0%
!!! TGCATCGGATTTTGAAGTGG+AGG - chr3.4:39975388-39975407 None:intergenic 45.0%
ATGACACCGATGATGCTACC+GGG + chr3.4:39975310-39975329 MS.gene22222:CDS 50.0%
ATTCCACCCAGCAATAGCAG+TGG + chr3.4:39976013-39976032 MS.gene22222:CDS 50.0%
CATGACACCGATGATGCTAC+CGG + chr3.4:39975309-39975328 MS.gene22222:CDS 50.0%
CATTGGTCCACTGCTATTGC+TGG - chr3.4:39976023-39976042 None:intergenic 50.0%
GATGCTGTGGGTGGCAAAAT+GGG + chr3.4:39976064-39976083 MS.gene22222:CDS 50.0%
GATTATGCACTTCAGCAGCG+CGG - chr3.4:39974756-39974775 None:intergenic 50.0%
GATTTCCCATTCTCATGCCG+AGG - chr3.4:39974436-39974455 None:intergenic 50.0%
GCAATTACCGAGAATGCCTC+TGG + chr3.4:39975405-39975424 MS.gene22222:CDS 50.0%
GCATATTGCTCCGAAAGAGC+AGG - chr3.4:39975526-39975545 None:intergenic 50.0%
GGGTATCAAGCAACGGTGTT+TGG + chr3.4:39974356-39974375 MS.gene22222:CDS 50.0%
GTCTGACAGGAAGAAACGGA+CGG - chr3.4:39975433-39975452 None:intergenic 50.0%
GTGGAGCTTCTATGGCAGAA+TGG + chr3.4:39973797-39973816 MS.gene22222:CDS 50.0%
TAGGTGATGTGGATGGGATC+TGG + chr3.4:39975286-39975305 MS.gene22222:intron 50.0%
TGATGCTGTGGGTGGCAAAA+TGG + chr3.4:39976063-39976082 MS.gene22222:CDS 50.0%
! CAGGTTGGACCATGAACTTG+TGG + chr3.4:39973778-39973797 MS.gene22222:intron 50.0%
! TGATTTGTGTGGATCCGGCA+AGG + chr3.4:39974147-39974166 MS.gene22222:CDS 50.0%
!! AATTTCCTATGTCGGCTCCG+AGG + chr3.4:39974086-39974105 MS.gene22222:CDS 50.0%
!! TGTCTGGTTTGGTGTCTGAC+AGG - chr3.4:39975446-39975465 None:intergenic 50.0%
CGGAAGCAACCAAGTCCAAC+AGG + chr3.4:39974318-39974337 MS.gene22222:CDS 55.0%
CTGTGGGTGGCAAAATGGGT+AGG + chr3.4:39976068-39976087 MS.gene22222:intron 55.0%
GAAGAAACGGACGGATCCAG+AGG - chr3.4:39975424-39975443 None:intergenic 55.0%
! GGTGGTTCGGGAAGTAGTCT+TGG + chr3.4:39974490-39974509 MS.gene22222:CDS 55.0%
!! AAAAAGGCGTCTCAGCGGTC+AGG + chr3.4:39974715-39974734 MS.gene22222:CDS 55.0%
!! AAAAGGCGTCTCAGCGGTCA+GGG + chr3.4:39974716-39974735 MS.gene22222:CDS 55.0%
!! GACGGATCCAGAGGCATTCT+CGG - chr3.4:39975415-39975434 None:intergenic 55.0%
CCAAACCTCGGAGCCGACAT+AGG - chr3.4:39974094-39974113 None:intergenic 60.0%
GGTCCACTGCTATTGCTGGG+TGG - chr3.4:39976019-39976038 None:intergenic 60.0%
!! CCTATGTCGGCTCCGAGGTT+TGG + chr3.4:39974091-39974110 MS.gene22222:CDS 60.0%
GGCGTCTCAGCGGTCAGGGT+CGG + chr3.4:39974720-39974739 MS.gene22222:CDS 70.0%
!! AGCGGTCAGGGTCGGCTCGT+AGG + chr3.4:39974728-39974747 MS.gene22222:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 39973601 39976267 39973601 ID=MS.gene22222
chr3.4 mRNA 39973601 39976267 39973601 ID=MS.gene22222.t1;Parent=MS.gene22222
chr3.4 exon 39973601 39973674 39973601 ID=MS.gene22222.t1.exon1;Parent=MS.gene22222.t1
chr3.4 CDS 39973601 39973674 39973601 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39973781 39974594 39973781 ID=MS.gene22222.t1.exon2;Parent=MS.gene22222.t1
chr3.4 CDS 39973781 39974594 39973781 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39974688 39974786 39974688 ID=MS.gene22222.t1.exon3;Parent=MS.gene22222.t1
chr3.4 CDS 39974688 39974786 39974688 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39974871 39974936 39974871 ID=MS.gene22222.t1.exon4;Parent=MS.gene22222.t1
chr3.4 CDS 39974871 39974936 39974871 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39975135 39975200 39975135 ID=MS.gene22222.t1.exon5;Parent=MS.gene22222.t1
chr3.4 CDS 39975135 39975200 39975135 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39975289 39975585 39975289 ID=MS.gene22222.t1.exon6;Parent=MS.gene22222.t1
chr3.4 CDS 39975289 39975585 39975289 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39975959 39976085 39975959 ID=MS.gene22222.t1.exon7;Parent=MS.gene22222.t1
chr3.4 CDS 39975959 39976085 39975959 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
chr3.4 exon 39976263 39976267 39976263 ID=MS.gene22222.t1.exon8;Parent=MS.gene22222.t1
chr3.4 CDS 39976263 39976267 39976263 ID=cds.MS.gene22222.t1;Parent=MS.gene22222.t1
Gene Sequence

>MS.gene22222

ATGAACAACACCGTTCCTGATTGGAATTTTGGGAGTGATAGTTTTGTCACCAATCAAAAGAAGCAACCTATGGGGTGTGTGTTCAATATTTCATTATCAATGCATAAAAATATTATTGTCCAAATTAAATTTGATTAAACTATGATTAATTAATTATTAACCATGTGTTTAACATTACAGGTTGGACCATGAACTTGTGGAGCTTCTATGGCAGAATGGTCAAGTAGTGTTGAATAGCCAAACAAATAAGAAACAAGTTGTGAATACAAATACAATCAACTCAAGACAAGTTCATAAGAATCTTCAATCAACAACTTTAAGCAACTTGATTCAAGATGATGAAACTGTTTCATGGATCCAACAATACCCTATTGAGGATCCACTTGAGCAAGAATTATGTTCAAATCTTTTATCTGAACTTCCACCTTGTAATGTCGAGTCTTTCAATTCGCAACCGACGAATACAAAACCTCCTTTTGTTCAGGAATTTCCTATGTCGGCTCCGAGGTTTGGTCATCATGTTCTCGATTCATCGCAAAGAAACAATGATTTGTGTGGATCCGGCAAGGTTGTAAACTTTTCTCACTTTTCAAGACTTCCGAATGTTACTTTAGCATCTACTAACGGCGATGCAAATTTTAGAGACAAAATTACGGGTAATCTTTCACAATGTGATATTAGAGAGTGTTCAACGATGACAGTTGGTTCGAGTTATTGCGGAAGCAACCAAGTCCAACAGGATCAAGATGTAAGCAGGGTATCAAGCAACGGTGTTTGGACTAATTTATCGATCGAGCCTGAACAAGTCAAAAATGATGTTCAGAGAACAATTCCTCGGCATGAGAATGGGAAATCGGAGATATTGGAACCTGCTTTTACTTCATCTTCTGGTGGTTCGGGAAGTAGTCTTGGAAAAACTTGTTCCTTATCTACAAGAAGTCATGACAAAAAGAGGAAAGTGATGGATGTTGAAGATTCAGTGGAACAAAGCGAGGTAAAGCCGCAGTCTCTATCTATTTACCTTCATAATTAGATGTTTTTCATTCATTGATACACTGAGTTATGATTTTATGGTTTGTGTTAATAGGATACAGAACTTAAATCAGCCGTGAGAAAAAAGGCGTCTCAGCGGTCAGGGTCGGCTCGTAGGAACCGCGCTGCTGAAGTGCATAATCTTTCAGAAAGGGTAAGGGTTTGACACTTCTCTAGATAGACTGAAGTTTTCTAAAATTTTGCGCTTACAAGAATTATTATTCGTTTATTGATGCAGAGGCGAAGAGATAGAATTAATGAGAAGATGAAAGCATTACAACAACTCATACCTCACAGTAGTAAGGTTTGTCATCAAACCGTGTTTTTTTTTTATAGGCAATTGCTAGTGGTTAATTTTTTAAGGCGACAAAAAATTTGTTAGTAGCAGGTATTGAACCCTGAATTCGCGTCAATTTAATCGTGTATAGAAAACGATCGATTTCCCATGTTGTATGATTTAATCGCAGTGGTTTAAAAACTGAGTAAGTGATATATATTGCAGACAGACAAAGCATCAATGTTAGAAGAGGCAATTGAATACTTGAAATCACTTCAGTTACAACTTCAGGTATATATATTATGTGCCATACAAAATAATCTCTTGCATATGAAAATTGCCTCACATTGCTAAAGAATTTTTTTGATTTTTCTGTTAGGTGATGTGGATGGGATCTGGCATGACACCGATGATGCTACCGGGATATCAGCACTATATGTCACAAATGGGTATGGGAATGACTACACCTTCGTTTCCTCCACTTCAAAATCCGATGCAATTACCGAGAATGCCTCTGGATCCGTCCGTTTCTTCCTGTCAGACACCAAACCAGACATTAACGAGCCAAAATCCTGTTTTAGGTGCCTTCAACTACCAAAATCAGATGCAAAATCCTGCTCTTTCGGAGCAATATGCTCGTTACATGGGCTATCATCTTATGCAAAATGCTTCTCAGGTACTTAGGATTTGTTTGGATATACTTCTTTTTTCTACTGACATAAACACCTGAGAGACTATTTAGGAGATCTTATGGCTACAACTTATATTACATGTCCATAAGTTGTTTTCAGCTTATTTCCACAAGTTCTTCATGATAGTTTATAAAAACAGCCTATATCTTACATGAAAACAGTTTTACTTAAATTTTCTCTTTTTGTTACAAAAATAACTTACACATAAACACATACTAGTATATAATAACTATTTAGTTAAGTTAGTTTATCCAAACAGGGTCTAAATTTAAAATGCTCCCCTTATAAATTAATGATATTCTCATGTTTTACTCTATGGAAATTAATTTTACCTTGTATGTTGGCACTATTTTGTAGCCAATGAATATGTACAGATATGGTCCCCAAGCTGTACAAAATAGTCAAACAATGATTCCACCCAGCAATAGCAGTGGACCAATGAGTGGAACAGCAAACATTAATGATGCTGTGGGTGGCAAAATGGGTAGGCCAACACATACTTCTCTATTGTCATAGCCTCTAATATTGTTCTCATATTATATGCTATACATAGACATATCATTAAAAGTTTCATGATTTTTTTTTTCATTTTCTATTTTATTTATTATGTACTTGTATATTTAAAACTTACTAAAAATTTTACTTGTCATTTTGTTTACAGGTTAA

Protein sequence

>MS.gene22222.t1

MNNTVPDWNFGSDSFVTNQKKQPMGLDHELVELLWQNGQVVLNSQTNKKQVVNTNTINSRQVHKNLQSTTLSNLIQDDETVSWIQQYPIEDPLEQELCSNLLSELPPCNVESFNSQPTNTKPPFVQEFPMSAPRFGHHVLDSSQRNNDLCGSGKVVNFSHFSRLPNVTLASTNGDANFRDKITGNLSQCDIRECSTMTVGSSYCGSNQVQQDQDVSRVSSNGVWTNLSIEPEQVKNDVQRTIPRHENGKSEILEPAFTSSSGGSGSSLGKTCSLSTRSHDKKRKVMDVEDSVEQSEDTELKSAVRKKASQRSGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMTPMMLPGYQHYMSQMGMGMTTPSFPPLQNPMQLPRMPLDPSVSSCQTPNQTLTSQNPVLGAFNYQNQMQNPALSEQYARYMGYHLMQNASQPMNMYRYGPQAVQNSQTMIPPSNSSGPMSGTANINDAVGGKMG