Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50595.t1 | XP_013468558.1 | 97.3 | 371 | 10 | 0 | 1 | 371 | 105 | 475 | 5.20E-208 | 733.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50595.t1 | Q8R1Q9 | 25.8 | 283 | 171 | 9 | 17 | 289 | 54 | 307 | 1.4e-12 | 75.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50595.t1 | A0A072VWX3 | 97.3 | 371 | 10 | 0 | 1 | 371 | 105 | 475 | 3.7e-208 | 733.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene50595 | 0.826607 | 2.47E-54 | -1.69E-46 |
| MS.gene049378 | MS.gene50595 | 0.821982 | 3.02E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene50595 | 0.833984 | 3.89E-56 | -1.69E-46 |
| MS.gene04984 | MS.gene50595 | 0.846019 | 2.83E-59 | -1.69E-46 |
| MS.gene050226 | MS.gene50595 | 0.84635 | 2.30E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene50595 | 0.838918 | 2.16E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene50595 | 0.833214 | 6.06E-56 | -1.69E-46 |
| MS.gene050319 | MS.gene50595 | -0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene50595 | -0.805809 | 1.12E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene50595 | 0.837802 | 4.19E-57 | -1.69E-46 |
| MS.gene050516 | MS.gene50595 | 0.823439 | 1.38E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene50595 | 0.813158 | 2.95E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene50595 | 0.816053 | 6.74E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene50595 | -0.838749 | 2.39E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene50595 | 0.851816 | 6.94E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene50595 | 0.853626 | 2.11E-61 | -1.69E-46 |
| MS.gene050724 | MS.gene50595 | 0.839544 | 1.49E-57 | -1.69E-46 |
| MS.gene050762 | MS.gene50595 | 0.847829 | 9.03E-60 | -1.69E-46 |
| MS.gene050763 | MS.gene50595 | 0.849035 | 4.19E-60 | -1.69E-46 |
| MS.gene050824 | MS.gene50595 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene50595 | 0.845215 | 4.67E-59 | -1.69E-46 |
| MS.gene051662 | MS.gene50595 | 0.810068 | 1.39E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene50595 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene50595 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene50595 | 0.820823 | 5.59E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene50595 | 0.829716 | 4.40E-55 | -1.69E-46 |
| MS.gene052254 | MS.gene50595 | 0.803022 | 4.25E-49 | -1.69E-46 |
| MS.gene052256 | MS.gene50595 | 0.821485 | 3.94E-53 | -1.69E-46 |
| MS.gene052302 | MS.gene50595 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene50595 | 0.818432 | 1.97E-52 | -1.69E-46 |
| MS.gene052564 | MS.gene50595 | 0.812391 | 4.34E-51 | -1.69E-46 |
| MS.gene052565 | MS.gene50595 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene50595 | 0.838947 | 2.12E-57 | -1.69E-46 |
| MS.gene052856 | MS.gene50595 | 0.848309 | 6.65E-60 | -1.69E-46 |
| MS.gene052858 | MS.gene50595 | 0.823411 | 1.41E-53 | -1.69E-46 |
| MS.gene052860 | MS.gene50595 | 0.81897 | 1.48E-52 | -1.69E-46 |
| MS.gene053184 | MS.gene50595 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene053565 | MS.gene50595 | 0.800702 | 1.27E-48 | -1.69E-46 |
| MS.gene053630 | MS.gene50595 | 0.820442 | 6.85E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene50595 | 0.854839 | 9.42E-62 | -1.69E-46 |
| MS.gene054379 | MS.gene50595 | 0.835603 | 1.52E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene50595 | 0.816911 | 4.33E-52 | -1.69E-46 |
| MS.gene054667 | MS.gene50595 | 0.820063 | 8.36E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene50595 | 0.850664 | 1.47E-60 | -1.69E-46 |
| MS.gene054942 | MS.gene50595 | 0.839113 | 1.92E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene50595 | 0.821453 | 4.01E-53 | -1.69E-46 |
| MS.gene055816 | MS.gene50595 | -0.833388 | 5.49E-56 | -1.69E-46 |
| MS.gene056069 | MS.gene50595 | -0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene056875 | MS.gene50595 | 0.819195 | 1.32E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene50595 | 0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene50595 | 0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene50595 | 0.821283 | 4.38E-53 | -1.69E-46 |
| MS.gene057665 | MS.gene50595 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene058182 | MS.gene50595 | 0.810925 | 9.04E-51 | -1.69E-46 |
| MS.gene058661 | MS.gene50595 | -0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene50595 | 0.807685 | 4.48E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene50595 | 0.803552 | 3.30E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene50595 | 0.80553 | 1.28E-49 | -1.69E-46 |
| MS.gene058982 | MS.gene50595 | 0.827739 | 1.32E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene50595 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene50595 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene060404 | MS.gene50595 | 0.819391 | 1.19E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene50595 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene50595 | 0.858838 | 6.26E-63 | -1.69E-46 |
| MS.gene060619 | MS.gene50595 | 0.80479 | 1.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50595.t1 | MTR_1g070375 | 97.305 | 371 | 10 | 0 | 1 | 371 | 105 | 475 | 0.0 | 751 |
| MS.gene50595.t1 | MTR_1g070375 | 97.143 | 350 | 10 | 0 | 22 | 371 | 1 | 350 | 0.0 | 701 |
| MS.gene50595.t1 | MTR_2g098950 | 26.421 | 299 | 196 | 8 | 17 | 306 | 46 | 329 | 1.25e-15 | 77.4 |
| MS.gene50595.t1 | MTR_6g089480 | 25.397 | 315 | 202 | 9 | 4 | 304 | 14 | 309 | 2.49e-13 | 70.5 |
| MS.gene50595.t1 | MTR_1g076850 | 25.000 | 304 | 196 | 9 | 17 | 307 | 40 | 324 | 3.47e-12 | 67.0 |
| MS.gene50595.t1 | MTR_7g075860 | 24.516 | 310 | 189 | 10 | 16 | 305 | 72 | 356 | 1.10e-11 | 65.9 |
| MS.gene50595.t1 | MTR_1g101950 | 24.917 | 301 | 193 | 9 | 4 | 290 | 43 | 324 | 8.74e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50595.t1 | AT1G06730 | 61.308 | 367 | 134 | 3 | 1 | 362 | 116 | 479 | 9.45e-164 | 468 |
| MS.gene50595.t1 | AT5G51830 | 26.101 | 318 | 202 | 9 | 4 | 307 | 43 | 341 | 1.79e-14 | 74.3 |
| MS.gene50595.t1 | AT5G51830 | 26.101 | 318 | 202 | 9 | 4 | 307 | 43 | 341 | 1.79e-14 | 74.3 |
| MS.gene50595.t1 | AT2G31390 | 26.441 | 295 | 169 | 9 | 17 | 290 | 41 | 308 | 3.52e-13 | 70.1 |
| MS.gene50595.t1 | AT3G59480 | 25.839 | 298 | 197 | 7 | 17 | 305 | 42 | 324 | 1.52e-12 | 68.2 |
| MS.gene50595.t1 | AT1G66430 | 26.115 | 314 | 200 | 10 | 4 | 304 | 85 | 379 | 2.13e-12 | 68.2 |
| MS.gene50595.t1 | AT1G06020 | 24.055 | 291 | 181 | 9 | 17 | 290 | 42 | 309 | 2.35e-11 | 64.7 |
Find 84 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATGAAGATCGTGAATTT+TGG | 0.141116 | 1.2:+53928154 | MS.gene50595:CDS |
| GGCACATTCTCCACTGTCTT+TGG | 0.239368 | 1.2:-53928315 | None:intergenic |
| GCAAGGATCCTGCATTTAAT+TGG | 0.252553 | 1.2:+53926122 | MS.gene50595:CDS |
| AGCGTGTGCACCTGCATTTA+AGG | 0.324315 | 1.2:+53927440 | MS.gene50595:CDS |
| CACATCAATCTTCTTTGATC+CGG | 0.345007 | 1.2:+53926276 | MS.gene50595:CDS |
| GATGATACTGTCAGCAGTTC+TGG | 0.355643 | 1.2:+53925930 | MS.gene50595:CDS |
| TTTGTAGCTGCTATTGCATA+TGG | 0.383282 | 1.2:+53927994 | MS.gene50595:CDS |
| TCCAAAATTCACGATCTTCA+TGG | 0.387406 | 1.2:-53928155 | None:intergenic |
| GTCTTTGGAAACTCAAGCTT+GGG | 0.400311 | 1.2:-53928300 | None:intergenic |
| TAAAGCTCTCATGGAACATT+TGG | 0.401865 | 1.2:+53924323 | None:intergenic |
| CGTCACTCATCCTCAGAAAC+TGG | 0.405365 | 1.2:-53926354 | None:intergenic |
| CATGTTGGTAATGAAATCTA+TGG | 0.407871 | 1.2:+53925846 | MS.gene50595:CDS |
| AACTCTTGCCCAGCTAATAT+CGG | 0.409872 | 1.2:-53927336 | None:intergenic |
| GGATTTGATGATTTCTCTCC+TGG | 0.416073 | 1.2:+53926214 | MS.gene50595:CDS |
| AGCTGGTGGGAACTGCAATA+TGG | 0.417528 | 1.2:+53925779 | MS.gene50595:CDS |
| TCAGAGGCAACCTTGTCAAA+TGG | 0.421078 | 1.2:-53928270 | None:intergenic |
| CTTATGAAACACTTCTATGC+TGG | 0.427598 | 1.2:+53925958 | MS.gene50595:CDS |
| ACAGCCATGGGCTGTGGTGC+CGG | 0.437629 | 1.2:+53928078 | MS.gene50595:CDS |
| CGTGGAAAGAGCCTCTCCTC+TGG | 0.440947 | 1.2:+53926304 | MS.gene50595:CDS |
| GGCTTCCTCTCCACCTCCCA+AGG | 0.443792 | 1.2:+53924344 | MS.gene50595:CDS |
| ATGCAGGCTGAGTCATTAAC+TGG | 0.444307 | 1.2:+53927303 | MS.gene50595:intron |
| CGGTAGGAATGTAGCATCTC+TGG | 0.451783 | 1.2:+53928098 | MS.gene50595:CDS |
| CAGAGGCAACCTTGTCAAAT+GGG | 0.455291 | 1.2:-53928269 | None:intergenic |
| GCATAGAAGTGTTTCATAAG+AGG | 0.457998 | 1.2:-53925955 | None:intergenic |
| GGACTTAACTGTGTATCAAT+TGG | 0.460566 | 1.2:+53925822 | MS.gene50595:CDS |
| TGAACATTGTTGACAGTGTT+GGG | 0.468406 | 1.2:+53927959 | MS.gene50595:CDS |
| AGTAGGTGCGGCAACAGCCA+TGG | 0.475177 | 1.2:+53928065 | MS.gene50595:CDS |
| AGGCTCTTTCCACGTGGTCC+CGG | 0.476064 | 1.2:-53926295 | None:intergenic |
| ATAGGAGATCCGATATTAGC+TGG | 0.479806 | 1.2:+53927327 | MS.gene50595:CDS |
| TGTCTTTGGAAACTCAAGCT+TGG | 0.484443 | 1.2:-53928301 | None:intergenic |
| GCGGCAACAGCCATGGGCTG+TGG | 0.488054 | 1.2:+53928072 | MS.gene50595:CDS |
| TTATGAAACACTTCTATGCT+GGG | 0.490537 | 1.2:+53925959 | MS.gene50595:CDS |
| GAATGTAGCATCTCTGGAAA+AGG | 0.490628 | 1.2:+53928104 | MS.gene50595:CDS |
| TCCTAGCCTTGCAGCTGCTA+TGG | 0.495253 | 1.2:-53925802 | None:intergenic |
| ACATCAATCTTCTTTGATCC+GGG | 0.496885 | 1.2:+53926277 | MS.gene50595:CDS |
| GTGTAGAAACATTGGGAAGC+TGG | 0.501195 | 1.2:+53925762 | MS.gene50595:intron |
| CAAAACCCATGTCTCTGTAA+AGG | 0.506743 | 1.2:-53925993 | None:intergenic |
| TTGCTCAGCCAATTAAATGC+AGG | 0.510676 | 1.2:-53926130 | None:intergenic |
| TGAAAAGAAAGTGATAGATC+AGG | 0.511007 | 1.2:+53928188 | MS.gene50595:CDS |
| AATGCTAATGTATTAACCAT+TGG | 0.518610 | 1.2:-53928033 | None:intergenic |
| GATGAGGGCATTAGCATGGT+TGG | 0.522641 | 1.2:+53925894 | MS.gene50595:CDS |
| CAACTTTGTCCCATTTGACA+AGG | 0.527209 | 1.2:+53928260 | MS.gene50595:CDS |
| GTGAACATTGTTGACAGTGT+TGG | 0.528046 | 1.2:+53927958 | MS.gene50595:CDS |
| GGGCAAGAGTTGCTTAAAAG+AGG | 0.533231 | 1.2:+53927348 | MS.gene50595:CDS |
| TGTGTATCAATTGGTCATGT+TGG | 0.537868 | 1.2:+53925831 | MS.gene50595:CDS |
| ATGAGGGCATTAGCATGGTT+GGG | 0.538624 | 1.2:+53925895 | MS.gene50595:CDS |
| GTAGGTGCGGCAACAGCCAT+GGG | 0.545610 | 1.2:+53928066 | MS.gene50595:CDS |
| GTCAGATGTGCTTCGTGATG+AGG | 0.552362 | 1.2:+53925878 | MS.gene50595:CDS |
| GTGGAAAGAGCCTCTCCTCT+GGG | 0.556111 | 1.2:+53926305 | MS.gene50595:CDS |
| GTTCTTGAGTCCCAGAGGAG+AGG | 0.557886 | 1.2:-53926315 | None:intergenic |
| CAGCTGTCAAAATATCAAGT+TGG | 0.558330 | 1.2:-53928336 | None:intergenic |
| ATTGTTGACAGTGTTGGGTG+TGG | 0.561805 | 1.2:+53927964 | MS.gene50595:CDS |
| CCATGGGCTGTGGTGCCGGT+AGG | 0.567182 | 1.2:+53928082 | MS.gene50595:CDS |
| TGAGAAGTTACCTTAAATGC+AGG | 0.567864 | 1.2:-53927450 | None:intergenic |
| CAGAGATGCTACATTCCTAC+CGG | 0.568773 | 1.2:-53928097 | None:intergenic |
| TTAGCATTTGCAAATGCAGT+AGG | 0.570503 | 1.2:+53928048 | MS.gene50595:CDS |
| TCAGATGTGCTTCGTGATGA+GGG | 0.574196 | 1.2:+53925879 | MS.gene50595:CDS |
| TGGTTTACTACTCTCAGTAG+TGG | 0.581346 | 1.2:+53926234 | MS.gene50595:CDS |
| ATATGGCCATAGCAGCTGCA+AGG | 0.584508 | 1.2:+53925796 | MS.gene50595:CDS |
| GCCATAGCAGCTGCAAGGCT+AGG | 0.584719 | 1.2:+53925801 | MS.gene50595:CDS |
| GTTGATCCTTTACAGAGACA+TGG | 0.587141 | 1.2:+53925987 | MS.gene50595:CDS |
| CCTACCGGCACCACAGCCCA+TGG | 0.589066 | 1.2:-53928082 | None:intergenic |
| GTGGACTGTGCTGTTGAAGT+TGG | 0.589939 | 1.2:+53926253 | MS.gene50595:CDS |
| GGCAAGAGTTGCTTAAAAGA+GGG | 0.592747 | 1.2:+53927349 | MS.gene50595:CDS |
| ATGTTGGTAATGAAATCTAT+GGG | 0.593558 | 1.2:+53925847 | MS.gene50595:CDS |
| TTACAATCACCCACTTTGTG+CGG | 0.595623 | 1.2:-53927374 | None:intergenic |
| TTCTTTGATCCGGGACCACG+TGG | 0.595825 | 1.2:+53926286 | MS.gene50595:CDS |
| AAGAGGGATCCGCACAAAGT+GGG | 0.597510 | 1.2:+53927365 | MS.gene50595:CDS |
| TTGATCCTTTACAGAGACAT+GGG | 0.597570 | 1.2:+53925988 | MS.gene50595:CDS |
| GAGCTCTTAACCAGTTTCTG+AGG | 0.600769 | 1.2:+53926344 | MS.gene50595:CDS |
| TAGAAACATTGGGAAGCTGG+TGG | 0.613030 | 1.2:+53925765 | MS.gene50595:intron |
| GCTGAGTCATTAACTGGCAT+AGG | 0.613196 | 1.2:+53927309 | MS.gene50595:CDS |
| ATAAACCTTGGGAGGTGGAG+AGG | 0.615378 | 1.2:-53924349 | None:intergenic |
| TAGGAGATCCGATATTAGCT+GGG | 0.616829 | 1.2:+53927328 | MS.gene50595:CDS |
| TCGTGATGAGGGCATTAGCA+TGG | 0.620050 | 1.2:+53925890 | MS.gene50595:CDS |
| CTGTTGTTCTTGAGTCCCAG+AGG | 0.629490 | 1.2:-53926320 | None:intergenic |
| AAAGAGGGATCCGCACAAAG+TGG | 0.631344 | 1.2:+53927364 | MS.gene50595:CDS |
| GCTTGAGTTTCCAAAGACAG+TGG | 0.639689 | 1.2:+53928305 | MS.gene50595:CDS |
| ATTTGCAAATGCAGTAGGTG+CGG | 0.643035 | 1.2:+53928053 | MS.gene50595:CDS |
| AGAAACATTGGGAAGCTGGT+GGG | 0.649654 | 1.2:+53925766 | MS.gene50595:intron |
| TCTTCTTCTAACATCTGACG+AGG | 0.678328 | 1.2:+53926378 | MS.gene50595:CDS |
| AAGCTTGGGCAAGAGCTCAG+AGG | 0.678959 | 1.2:-53928286 | None:intergenic |
| ACTACTGAGAGTAGTAAACC+AGG | 0.679000 | 1.2:-53926232 | None:intergenic |
| GAGGAGAGGCTCTTTCCACG+TGG | 0.712337 | 1.2:-53926301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAATATTTCAGT+AGG | - | chr1.2:53927725-53927744 | None:intergenic | 10.0% |
| !! | CTATAATAAACAAAAAAAAA+AGG | - | chr1.2:53926062-53926081 | None:intergenic | 10.0% |
| !! | TTACTTAATCTTAAAATAAA+TGG | + | chr1.2:53927124-53927143 | MS.gene50595:intron | 10.0% |
| !! | TTATATATATTCTGTTTATA+AGG | + | chr1.2:53926661-53926680 | MS.gene50595:intron | 10.0% |
| !!! | CTTTATATTTTAAAACATAA+TGG | + | chr1.2:53927673-53927692 | MS.gene50595:intron | 10.0% |
| !! | ATAAATATAGAAGTGATTAA+TGG | - | chr1.2:53927220-53927239 | None:intergenic | 15.0% |
| !! | ATTAGCTATTAAAAATTCAA+AGG | + | chr1.2:53926171-53926190 | MS.gene50595:CDS | 15.0% |
| !! | ATTGATATTCTTCAATATAA+GGG | - | chr1.2:53925404-53925423 | None:intergenic | 15.0% |
| !! | CAATGATAAAATTTATTCAA+GGG | + | chr1.2:53925176-53925195 | MS.gene50595:intron | 15.0% |
| !! | TAAATATAGAAGTGATTAAT+GGG | - | chr1.2:53927219-53927238 | None:intergenic | 15.0% |
| !! | TTAATAGATCTAAATTTCAT+AGG | + | chr1.2:53925066-53925085 | MS.gene50595:intron | 15.0% |
| !!! | AAACTACAAATAACTTTTAA+AGG | - | chr1.2:53926849-53926868 | None:intergenic | 15.0% |
| !!! | AACAGTTTTGTAATTAAAAA+GGG | + | chr1.2:53924741-53924760 | MS.gene50595:intron | 15.0% |
| !!! | ATAATTTGTCTAAAGATTAT+TGG | + | chr1.2:53926999-53927018 | MS.gene50595:intron | 15.0% |
| !!! | CTTCTATATTTATAATTTGT+AGG | + | chr1.2:53927227-53927246 | MS.gene50595:intron | 15.0% |
| !!! | TAACAGTTTTGTAATTAAAA+AGG | + | chr1.2:53924740-53924759 | MS.gene50595:intron | 15.0% |
| !!! | TGAATAACATTTTACAATTT+TGG | - | chr1.2:53924851-53924870 | None:intergenic | 15.0% |
| !!! | TTAAAGATTTTATGCTTATT+CGG | - | chr1.2:53925498-53925517 | None:intergenic | 15.0% |
| !!! | TTTTTAAGTTCTTTTTTCTT+TGG | + | chr1.2:53926501-53926520 | MS.gene50595:intron | 15.0% |
| !! | CCAATGATAAAATTTATTCA+AGG | + | chr1.2:53925175-53925194 | MS.gene50595:intron | 20.0% |
| !! | GAGTTATCACAAAAATTTAA+TGG | - | chr1.2:53927900-53927919 | None:intergenic | 20.0% |
| !! | GATTGATATTCTTCAATATA+AGG | - | chr1.2:53925405-53925424 | None:intergenic | 20.0% |
| !! | GATTTATAAATTATGTCATC+AGG | + | chr1.2:53927936-53927955 | MS.gene50595:intron | 20.0% |
| !! | TTAAAATAAATGGTATGAAG+TGG | + | chr1.2:53927134-53927153 | MS.gene50595:intron | 20.0% |
| !! | TTAAAATGAAATTCCAGTTT+AGG | + | chr1.2:53927612-53927631 | MS.gene50595:intron | 20.0% |
| !!! | AATATCATGAAATCTTTTGA+CGG | + | chr1.2:53925251-53925270 | MS.gene50595:intron | 20.0% |
| !!! | ACAGTTTTGTAATTAAAAAG+GGG | + | chr1.2:53924742-53924761 | MS.gene50595:intron | 20.0% |
| !!! | ATAGCTTATGAATACAATTT+TGG | + | chr1.2:53924531-53924550 | MS.gene50595:intron | 20.0% |
| !!! | ATTTTCCCTTTAAATTGTAA+GGG | - | chr1.2:53925617-53925636 | None:intergenic | 20.0% |
| !!! | CCTTGAATAAATTTTATCAT+TGG | - | chr1.2:53925178-53925197 | None:intergenic | 20.0% |
| !!! | TATTATTTTTTTGTCGAGAA+AGG | - | chr1.2:53924703-53924722 | None:intergenic | 20.0% |
| !!! | TATTTTCCCTTTAAATTGTA+AGG | - | chr1.2:53925618-53925637 | None:intergenic | 20.0% |
| !!! | TGAATAAATTTTATCATTGG+AGG | - | chr1.2:53925175-53925194 | None:intergenic | 20.0% |
| !!! | TTGATAATTCCTTTGATATT+AGG | - | chr1.2:53927774-53927793 | None:intergenic | 20.0% |
| !!! | TTTAAAATATAAAGTGTCTG+TGG | - | chr1.2:53927667-53927686 | None:intergenic | 20.0% |
| !!! | TTTTATACATAATTTGCCAA+TGG | + | chr1.2:53928017-53928036 | MS.gene50595:CDS | 20.0% |
| !!! | TTTTTCTGTTGCAAAATTTA+TGG | + | chr1.2:53927859-53927878 | MS.gene50595:intron | 20.0% |
| ! | AAAAAGTGACAAGTTATACT+TGG | - | chr1.2:53927815-53927834 | None:intergenic | 25.0% |
| ! | AAATTTCAATACACTTCACT+TGG | + | chr1.2:53926872-53926891 | MS.gene50595:intron | 25.0% |
| ! | AACGAAACAAAAAACAATAC+AGG | - | chr1.2:53924431-53924450 | None:intergenic | 25.0% |
| ! | AAGTACCATAGTATATAACT+TGG | - | chr1.2:53926760-53926779 | None:intergenic | 25.0% |
| ! | AATATAAAGTCCTTAGCATT+AGG | - | chr1.2:53926642-53926661 | None:intergenic | 25.0% |
| ! | AATGCTAATGTATTAACCAT+TGG | - | chr1.2:53928036-53928055 | None:intergenic | 25.0% |
| ! | AATTTCAATACACTTCACTT+GGG | + | chr1.2:53926873-53926892 | MS.gene50595:intron | 25.0% |
| ! | ACTGACATTGTTCAATTTAA+AGG | + | chr1.2:53925548-53925567 | MS.gene50595:intron | 25.0% |
| ! | AGGGAAAATATATAATGAGA+CGG | + | chr1.2:53925628-53925647 | MS.gene50595:intron | 25.0% |
| ! | ATTAATTCATAAGCTTGTCA+AGG | + | chr1.2:53924486-53924505 | MS.gene50595:intron | 25.0% |
| ! | ATTCAGGTAAAAATAAACCT+TGG | - | chr1.2:53924364-53924383 | None:intergenic | 25.0% |
| ! | ATTGCCTATTTACTCTTAAA+AGG | + | chr1.2:53925297-53925316 | MS.gene50595:intron | 25.0% |
| ! | ATTGTAAAAATGGGTCTTAA+GGG | + | chr1.2:53927390-53927409 | MS.gene50595:CDS | 25.0% |
| ! | TAAGATTAAGTAACAAGAGT+GGG | - | chr1.2:53927117-53927136 | None:intergenic | 25.0% |
| ! | TCAAAATCATGTGAAACAAT+TGG | + | chr1.2:53926912-53926931 | MS.gene50595:intron | 25.0% |
| ! | TTAAATTGTAGTGCTAAGTT+TGG | + | chr1.2:53925514-53925533 | MS.gene50595:intron | 25.0% |
| ! | TTAAGATTAAGTAACAAGAG+TGG | - | chr1.2:53927118-53927137 | None:intergenic | 25.0% |
| ! | TTCAGGTAAAAATAAACCTT+GGG | - | chr1.2:53924363-53924382 | None:intergenic | 25.0% |
| ! | TTGCCTATTTACTCTTAAAA+GGG | + | chr1.2:53925298-53925317 | MS.gene50595:intron | 25.0% |
| ! | TTTCGTGATTCAAATTGTAA+TGG | + | chr1.2:53925335-53925354 | MS.gene50595:intron | 25.0% |
| ! | TTTCTCCAAGTTATATACTA+TGG | + | chr1.2:53926752-53926771 | MS.gene50595:intron | 25.0% |
| !! | ACAGTGTTCTTGATTTTATT+CGG | + | chr1.2:53924390-53924409 | MS.gene50595:intron | 25.0% |
| !! | TCATATTTTCATGCTACAAA+TGG | + | chr1.2:53925710-53925729 | MS.gene50595:intron | 25.0% |
| !! | TGAACAATGCTTACAATTTT+GGG | - | chr1.2:53924788-53924807 | None:intergenic | 25.0% |
| !! | TTGAACAATGCTTACAATTT+TGG | - | chr1.2:53924789-53924808 | None:intergenic | 25.0% |
| !!! | ATGTTGGTAATGAAATCTAT+GGG | + | chr1.2:53925847-53925866 | MS.gene50595:CDS | 25.0% |
| !!! | CTGTCAAATATTTTGATGAA+TGG | + | chr1.2:53928222-53928241 | MS.gene50595:CDS | 25.0% |
| !!! | GTTTTGTTTTGTAATGGATA+TGG | + | chr1.2:53926193-53926212 | MS.gene50595:CDS | 25.0% |
| !!! | TCAAAGGTTTTGTTTTGTAA+TGG | + | chr1.2:53926187-53926206 | MS.gene50595:CDS | 25.0% |
| AAAAATTTGCCAATCCAAAC+GGG | + | chr1.2:53924619-53924638 | MS.gene50595:intron | 30.0% | |
| AAAGTGGGTGATTGTAAAAA+TGG | + | chr1.2:53927380-53927399 | MS.gene50595:CDS | 30.0% | |
| AACACTGTATAAGGTTAAGA+AGG | - | chr1.2:53926687-53926706 | None:intergenic | 30.0% | |
| AAGATGAAGACAGATTAACA+TGG | - | chr1.2:53926614-53926633 | None:intergenic | 30.0% | |
| AAGCAATCACAGTTCTATTA+AGG | - | chr1.2:53926437-53926456 | None:intergenic | 30.0% | |
| AAGTGGGTGATTGTAAAAAT+GGG | + | chr1.2:53927381-53927400 | MS.gene50595:CDS | 30.0% | |
| AATAGTAGAGGACAAATAGT+AGG | - | chr1.2:53926468-53926487 | None:intergenic | 30.0% | |
| AATTAAAAAGGGGAGTGAAT+AGG | + | chr1.2:53924752-53924771 | MS.gene50595:intron | 30.0% | |
| ACAATTGGAACAGTAGAAAA+AGG | + | chr1.2:53926927-53926946 | MS.gene50595:intron | 30.0% | |
| ACTGACCCTTACAATTTAAA+GGG | + | chr1.2:53925609-53925628 | MS.gene50595:intron | 30.0% | |
| AGAACACTGTAATGTAATTC+AGG | - | chr1.2:53924380-53924399 | None:intergenic | 30.0% | |
| AGGTCATATCAATCACAAAT+TGG | + | chr1.2:53924997-53925016 | MS.gene50595:intron | 30.0% | |
| AGGTTCCAAATCATGTTTAT+TGG | - | chr1.2:53926829-53926848 | None:intergenic | 30.0% | |
| AGTGTGAATTGTGAGTTTAA+AGG | + | chr1.2:53927022-53927041 | MS.gene50595:intron | 30.0% | |
| ATCTTCATATCCTAATGCTA+AGG | + | chr1.2:53926629-53926648 | MS.gene50595:intron | 30.0% | |
| CAAAAATTTGCCAATCCAAA+CGG | + | chr1.2:53924618-53924637 | MS.gene50595:intron | 30.0% | |
| CCATAATTGCAAATAATCGA+TGG | - | chr1.2:53927498-53927517 | None:intergenic | 30.0% | |
| CTATGGTACTTGCATATTTA+TGG | + | chr1.2:53926769-53926788 | MS.gene50595:intron | 30.0% | |
| GATTGTAAAAATGGGTCTTA+AGG | + | chr1.2:53927389-53927408 | MS.gene50595:CDS | 30.0% | |
| GGAGAATCTTTAAACTGATT+TGG | + | chr1.2:53926948-53926967 | MS.gene50595:intron | 30.0% | |
| GGTTCCAAATCATGTTTATT+GGG | - | chr1.2:53926828-53926847 | None:intergenic | 30.0% | |
| GTAAAAATGATTCACTGTCA+TGG | + | chr1.2:53926019-53926038 | MS.gene50595:intron | 30.0% | |
| GTATGAAGTGGCAAAATTAA+GGG | + | chr1.2:53927146-53927165 | MS.gene50595:intron | 30.0% | |
| GTGTGAATTGTGAGTTTAAA+GGG | + | chr1.2:53927023-53927042 | MS.gene50595:intron | 30.0% | |
| GTTCCAAATCATGTTTATTG+GGG | - | chr1.2:53926827-53926846 | None:intergenic | 30.0% | |
| TGAAAAGAAAGTGATAGATC+AGG | + | chr1.2:53928188-53928207 | MS.gene50595:CDS | 30.0% | |
| TGACACAGTAATTGAATTTG+TGG | - | chr1.2:53925142-53925161 | None:intergenic | 30.0% | |
| TGATATGACCTACATTTCAT+AGG | - | chr1.2:53924988-53925007 | None:intergenic | 30.0% | |
| TGCCTATTTACTCTTAAAAG+GGG | + | chr1.2:53925299-53925318 | MS.gene50595:intron | 30.0% | |
| TGTGAATTGTGAGTTTAAAG+GGG | + | chr1.2:53927024-53927043 | MS.gene50595:intron | 30.0% | |
| TTATGAAACACTTCTATGCT+GGG | + | chr1.2:53925959-53925978 | MS.gene50595:CDS | 30.0% | |
| TTCATTAATCTGACCTAAAC+TGG | - | chr1.2:53927628-53927647 | None:intergenic | 30.0% | |
| TTCCAACATCCTAATATCAA+AGG | + | chr1.2:53927762-53927781 | MS.gene50595:intron | 30.0% | |
| TTCCTTTGATATTAGGATGT+TGG | - | chr1.2:53927767-53927786 | None:intergenic | 30.0% | |
| TTTCCCCAATAAACATGATT+TGG | + | chr1.2:53926821-53926840 | MS.gene50595:intron | 30.0% | |
| ! | AATAGCTAATTTTGCTTCTC+TGG | - | chr1.2:53926161-53926180 | None:intergenic | 30.0% |
| ! | CCATCGATTATTTGCAATTA+TGG | + | chr1.2:53927495-53927514 | MS.gene50595:intron | 30.0% |
| ! | CTAATTTGCCTATGAAATGT+AGG | + | chr1.2:53924977-53924996 | MS.gene50595:intron | 30.0% |
| ! | GAACAATGCTTACAATTTTG+GGG | - | chr1.2:53924787-53924806 | None:intergenic | 30.0% |
| ! | TTGCCATTTCGTAAATTTGA+GGG | - | chr1.2:53925375-53925394 | None:intergenic | 30.0% |
| ! | TTTGCCATTTCGTAAATTTG+AGG | - | chr1.2:53925376-53925395 | None:intergenic | 30.0% |
| ! | TTTTATTGTCTTGTATCCTG+TGG | + | chr1.2:53925733-53925752 | MS.gene50595:intron | 30.0% |
| !! | CATGTTGGTAATGAAATCTA+TGG | + | chr1.2:53925846-53925865 | MS.gene50595:CDS | 30.0% |
| !!! | GATGTTTTTTATTTGCATGC+AGG | + | chr1.2:53927287-53927306 | MS.gene50595:intron | 30.0% |
| !!! | GTTTTTGGTGTAGAAACATT+GGG | + | chr1.2:53925755-53925774 | MS.gene50595:intron | 30.0% |
| AAAATGATTCACTGTCATGG+TGG | + | chr1.2:53926022-53926041 | MS.gene50595:intron | 35.0% | |
| ACATCAATCTTCTTTGATCC+GGG | + | chr1.2:53926277-53926296 | MS.gene50595:CDS | 35.0% | |
| AGGTAAAAATAAACCTTGGG+AGG | - | chr1.2:53924360-53924379 | None:intergenic | 35.0% | |
| AGTCCCTCAAATTTACGAAA+TGG | + | chr1.2:53925369-53925388 | MS.gene50595:intron | 35.0% | |
| CACATCAATCTTCTTTGATC+CGG | + | chr1.2:53926276-53926295 | MS.gene50595:CDS | 35.0% | |
| CACTCTACTTAACTTTGCTA+CGG | + | chr1.2:53927556-53927575 | MS.gene50595:intron | 35.0% | |
| CAGCATATCACAAATAGTAG+AGG | - | chr1.2:53926480-53926499 | None:intergenic | 35.0% | |
| CTCTACTATTTGTGATATGC+TGG | + | chr1.2:53926478-53926497 | MS.gene50595:intron | 35.0% | |
| CTTATGAAACACTTCTATGC+TGG | + | chr1.2:53925958-53925977 | MS.gene50595:CDS | 35.0% | |
| GACTGACCCTTACAATTTAA+AGG | + | chr1.2:53925608-53925627 | MS.gene50595:intron | 35.0% | |
| GGACTTAACTGTGTATCAAT+TGG | + | chr1.2:53925822-53925841 | MS.gene50595:CDS | 35.0% | |
| GGTATGAAGTGGCAAAATTA+AGG | + | chr1.2:53927145-53927164 | MS.gene50595:intron | 35.0% | |
| GTGAATTGTGAGTTTAAAGG+GGG | + | chr1.2:53927025-53927044 | MS.gene50595:intron | 35.0% | |
| GTTGGACACATGTGTAAAAA+TGG | - | chr1.2:53927068-53927087 | None:intergenic | 35.0% | |
| TAAAAATAAACCTTGGGAGG+TGG | - | chr1.2:53924357-53924376 | None:intergenic | 35.0% | |
| TAACTCGAGTGCAAACTAAT+TGG | + | chr1.2:53927914-53927933 | MS.gene50595:intron | 35.0% | |
| TAGCAAAGTTAAGTAGAGTG+TGG | - | chr1.2:53927556-53927575 | None:intergenic | 35.0% | |
| TCCAAAATTCACGATCTTCA+TGG | - | chr1.2:53928158-53928177 | None:intergenic | 35.0% | |
| TGAACATTGTTGACAGTGTT+GGG | + | chr1.2:53927959-53927978 | MS.gene50595:CDS | 35.0% | |
| TGAATTGTGAGTTTAAAGGG+GGG | + | chr1.2:53927026-53927045 | MS.gene50595:intron | 35.0% | |
| TGAGAAGTTACCTTAAATGC+AGG | - | chr1.2:53927453-53927472 | None:intergenic | 35.0% | |
| TGCCAATTTGGAAAAAATCG+CGG | - | chr1.2:53924819-53924838 | None:intergenic | 35.0% | |
| TGTGTATCAATTGGTCATGT+TGG | + | chr1.2:53925831-53925850 | MS.gene50595:CDS | 35.0% | |
| TTAGCATTTGCAAATGCAGT+AGG | + | chr1.2:53928048-53928067 | MS.gene50595:CDS | 35.0% | |
| TTGATCCTTTACAGAGACAT+GGG | + | chr1.2:53925988-53926007 | MS.gene50595:CDS | 35.0% | |
| TTTGTAGCTGCTATTGCATA+TGG | + | chr1.2:53927994-53928013 | MS.gene50595:CDS | 35.0% | |
| ! | ATATGAAGAGCACACAAAAG+TGG | - | chr1.2:53925696-53925715 | None:intergenic | 35.0% |
| ! | TATGAAGAGCACACAAAAGT+GGG | - | chr1.2:53925695-53925714 | None:intergenic | 35.0% |
| ! | TCCATGAAGATCGTGAATTT+TGG | + | chr1.2:53928154-53928173 | MS.gene50595:CDS | 35.0% |
| ! | TTCATAGGCAAATTAGCTTC+TGG | + | chr1.2:53925081-53925100 | MS.gene50595:intron | 35.0% |
| !! | CACTTTCTTTTCAAGAACGT+CGG | - | chr1.2:53928181-53928200 | None:intergenic | 35.0% |
| !! | CTCCCCTTTTAAGAGTAAAT+AGG | - | chr1.2:53925304-53925323 | None:intergenic | 35.0% |
| !! | GCATAGAAGTGTTTCATAAG+AGG | - | chr1.2:53925958-53925977 | None:intergenic | 35.0% |
| !!! | GGTTTTTGGTGTAGAAACAT+TGG | + | chr1.2:53925754-53925773 | MS.gene50595:intron | 35.0% |
| AAACGGGCACATTGTTGTAT+TGG | + | chr1.2:53924635-53924654 | MS.gene50595:intron | 40.0% | |
| AACCACGTCAAATGTTCAGA+AGG | - | chr1.2:53927699-53927718 | None:intergenic | 40.0% | |
| AACGGCAGAAACACTGTATA+AGG | - | chr1.2:53926696-53926715 | None:intergenic | 40.0% | |
| AACTCTTGCCCAGCTAATAT+CGG | - | chr1.2:53927339-53927358 | None:intergenic | 40.0% | |
| AATACAACAATGTGCCCGTT+TGG | - | chr1.2:53924636-53924655 | None:intergenic | 40.0% | |
| ACTACTGAGAGTAGTAAACC+AGG | - | chr1.2:53926235-53926254 | None:intergenic | 40.0% | |
| ATAGGAGATCCGATATTAGC+TGG | + | chr1.2:53927327-53927346 | MS.gene50595:CDS | 40.0% | |
| ATTTGCAAATGCAGTAGGTG+CGG | + | chr1.2:53928053-53928072 | MS.gene50595:CDS | 40.0% | |
| CAAAACCCATGTCTCTGTAA+AGG | - | chr1.2:53925996-53926015 | None:intergenic | 40.0% | |
| CAACTTTGTCCCATTTGACA+AGG | + | chr1.2:53928260-53928279 | MS.gene50595:CDS | 40.0% | |
| CTAAAATCAGCTCGACTAGT+AGG | - | chr1.2:53926103-53926122 | None:intergenic | 40.0% | |
| GAATGATAGTCAGCACTGTT+TGG | - | chr1.2:53925670-53925689 | None:intergenic | 40.0% | |
| GAATTGTGAGTTTAAAGGGG+GGG | + | chr1.2:53927027-53927046 | MS.gene50595:intron | 40.0% | |
| GCAAGGATCCTGCATTTAAT+TGG | + | chr1.2:53926122-53926141 | MS.gene50595:CDS | 40.0% | |
| GCCAATTTGGAAAAAATCGC+GGG | - | chr1.2:53924818-53924837 | None:intergenic | 40.0% | |
| GGCAAGAGTTGCTTAAAAGA+GGG | + | chr1.2:53927349-53927368 | MS.gene50595:CDS | 40.0% | |
| GTGAACATTGTTGACAGTGT+TGG | + | chr1.2:53927958-53927977 | MS.gene50595:CDS | 40.0% | |
| GTTGATCCTTTACAGAGACA+TGG | + | chr1.2:53925987-53926006 | MS.gene50595:CDS | 40.0% | |
| GTTTCTACACCAAAAACCAC+AGG | - | chr1.2:53925752-53925771 | None:intergenic | 40.0% | |
| TAGGAGATCCGATATTAGCT+GGG | + | chr1.2:53927328-53927347 | MS.gene50595:CDS | 40.0% | |
| TAGTCCACAACTAAGAGGAA+CGG | - | chr1.2:53926714-53926733 | None:intergenic | 40.0% | |
| TCAGAATGATGGTTTCACGT+TGG | - | chr1.2:53927086-53927105 | None:intergenic | 40.0% | |
| TCTTCTTCTAACATCTGACG+AGG | + | chr1.2:53926378-53926397 | MS.gene50595:CDS | 40.0% | |
| TGATGTAGGATCGATGTTGA+TGG | + | chr1.2:53925115-53925134 | MS.gene50595:intron | 40.0% | |
| TGGAGACGTATTTGCCAATT+TGG | - | chr1.2:53924831-53924850 | None:intergenic | 40.0% | |
| TGGTTTACTACTCTCAGTAG+TGG | + | chr1.2:53926234-53926253 | MS.gene50595:CDS | 40.0% | |
| TTACAATCACCCACTTTGTG+CGG | - | chr1.2:53927377-53927396 | None:intergenic | 40.0% | |
| TTGCTCAGCCAATTAAATGC+AGG | - | chr1.2:53926133-53926152 | None:intergenic | 40.0% | |
| ! | CAAATTAGCTTCTGGTGTGT+TGG | + | chr1.2:53925089-53925108 | MS.gene50595:intron | 40.0% |
| ! | GAATGTAGCATCTCTGGAAA+AGG | + | chr1.2:53928104-53928123 | MS.gene50595:CDS | 40.0% |
| ! | GGATTTGATGATTTCTCTCC+TGG | + | chr1.2:53926214-53926233 | MS.gene50595:CDS | 40.0% |
| ! | GTCTTGTATCCTGTGGTTTT+TGG | + | chr1.2:53925740-53925759 | MS.gene50595:intron | 40.0% |
| ! | GTCTTTGGAAACTCAAGCTT+GGG | - | chr1.2:53928303-53928322 | None:intergenic | 40.0% |
| ! | GTTTTACACTGACATCCAAC+AGG | - | chr1.2:53927174-53927193 | None:intergenic | 40.0% |
| ! | TGATTTGGAGCTGTGATTGT+TGG | + | chr1.2:53926963-53926982 | MS.gene50595:intron | 40.0% |
| ! | TGTCTTTGGAAACTCAAGCT+TGG | - | chr1.2:53928304-53928323 | None:intergenic | 40.0% |
| !! | GCAGTAACTTTTGTTGTCAG+AGG | + | chr1.2:53924882-53924901 | MS.gene50595:intron | 40.0% |
| !! | TACAGAGACATGGGTTTTGT+AGG | + | chr1.2:53925997-53926016 | MS.gene50595:CDS | 40.0% |
| !! | TAGTCGAGCTGATTTTAGCA+AGG | + | chr1.2:53926105-53926124 | MS.gene50595:intron | 40.0% |
| !!! | TCCCGCGATTTTTTCCAAAT+TGG | + | chr1.2:53924814-53924833 | MS.gene50595:intron | 40.0% |
| AACAATGTGCCCGTTTGGAT+TGG | - | chr1.2:53924631-53924650 | None:intergenic | 45.0% | |
| AGAAACATTGGGAAGCTGGT+GGG | + | chr1.2:53925766-53925785 | MS.gene50595:intron | 45.0% | |
| ATGCAGGCTGAGTCATTAAC+TGG | + | chr1.2:53927303-53927322 | MS.gene50595:intron | 45.0% | |
| CAGAGATGCTACATTCCTAC+CGG | - | chr1.2:53928100-53928119 | None:intergenic | 45.0% | |
| CAGAGGCAACCTTGTCAAAT+GGG | - | chr1.2:53928272-53928291 | None:intergenic | 45.0% | |
| GAGCTCTTAACCAGTTTCTG+AGG | + | chr1.2:53926344-53926363 | MS.gene50595:CDS | 45.0% | |
| GATGATACTGTCAGCAGTTC+TGG | + | chr1.2:53925930-53925949 | MS.gene50595:CDS | 45.0% | |
| GCAAAATTAAGGGCTCCTGT+TGG | + | chr1.2:53927156-53927175 | MS.gene50595:intron | 45.0% | |
| GCTGAGTCATTAACTGGCAT+AGG | + | chr1.2:53927309-53927328 | MS.gene50595:CDS | 45.0% | |
| GCTTGAGTTTCCAAAGACAG+TGG | + | chr1.2:53928305-53928324 | MS.gene50595:CDS | 45.0% | |
| GGGCAAGAGTTGCTTAAAAG+AGG | + | chr1.2:53927348-53927367 | MS.gene50595:CDS | 45.0% | |
| GTGTAGAAACATTGGGAAGC+TGG | + | chr1.2:53925762-53925781 | MS.gene50595:intron | 45.0% | |
| TAGAAACATTGGGAAGCTGG+TGG | + | chr1.2:53925765-53925784 | MS.gene50595:intron | 45.0% | |
| TCAGAGGCAACCTTGTCAAA+TGG | - | chr1.2:53928273-53928292 | None:intergenic | 45.0% | |
| TCAGATGTGCTTCGTGATGA+GGG | + | chr1.2:53925879-53925898 | MS.gene50595:CDS | 45.0% | |
| TCCAGTAGTCCACAACTAAG+AGG | - | chr1.2:53926719-53926738 | None:intergenic | 45.0% | |
| ! | ATTGTTGACAGTGTTGGGTG+TGG | + | chr1.2:53927964-53927983 | MS.gene50595:CDS | 45.0% |
| ! | TCCTCTTAGTTGTGGACTAC+TGG | + | chr1.2:53926715-53926734 | MS.gene50595:intron | 45.0% |
| ! | TGTTGTCAGAGGTGATGATG+TGG | + | chr1.2:53924893-53924912 | MS.gene50595:intron | 45.0% |
| !! | ATGAGGGCATTAGCATGGTT+GGG | + | chr1.2:53925895-53925914 | MS.gene50595:CDS | 45.0% |
| !! | TGGTGTGTTGGCATTGATGT+AGG | + | chr1.2:53925101-53925120 | MS.gene50595:intron | 45.0% |
| AAAGAGGGATCCGCACAAAG+TGG | + | chr1.2:53927364-53927383 | MS.gene50595:CDS | 50.0% | |
| AAGAGGGATCCGCACAAAGT+GGG | + | chr1.2:53927365-53927384 | MS.gene50595:CDS | 50.0% | |
| AGCGTGTGCACCTGCATTTA+AGG | + | chr1.2:53927440-53927459 | MS.gene50595:CDS | 50.0% | |
| AGCTGGTGGGAACTGCAATA+TGG | + | chr1.2:53925779-53925798 | MS.gene50595:CDS | 50.0% | |
| ATAAACCTTGGGAGGTGGAG+AGG | - | chr1.2:53924352-53924371 | None:intergenic | 50.0% | |
| ATATGGCCATAGCAGCTGCA+AGG | + | chr1.2:53925796-53925815 | MS.gene50595:CDS | 50.0% | |
| CGGTAGGAATGTAGCATCTC+TGG | + | chr1.2:53928098-53928117 | MS.gene50595:CDS | 50.0% | |
| CGTCACTCATCCTCAGAAAC+TGG | - | chr1.2:53926357-53926376 | None:intergenic | 50.0% | |
| CTGTTGTTCTTGAGTCCCAG+AGG | - | chr1.2:53926323-53926342 | None:intergenic | 50.0% | |
| GGCACATTCTCCACTGTCTT+TGG | - | chr1.2:53928318-53928337 | None:intergenic | 50.0% | |
| GGCCTTCTGAACATTTGACG+TGG | + | chr1.2:53927694-53927713 | MS.gene50595:intron | 50.0% | |
| GGGCTGACATGTCAGAATGA+TGG | - | chr1.2:53927097-53927116 | None:intergenic | 50.0% | |
| GTCAGATGTGCTTCGTGATG+AGG | + | chr1.2:53925878-53925897 | MS.gene50595:CDS | 50.0% | |
| TCTGCCGTTCCTCTTAGTTG+TGG | + | chr1.2:53926707-53926726 | MS.gene50595:intron | 50.0% | |
| ! | GTGGACTGTGCTGTTGAAGT+TGG | + | chr1.2:53926253-53926272 | MS.gene50595:CDS | 50.0% |
| ! | TGATGATGTGGCGCGTTACT+TGG | + | chr1.2:53924905-53924924 | MS.gene50595:intron | 50.0% |
| !! | GATGAGGGCATTAGCATGGT+TGG | + | chr1.2:53925894-53925913 | MS.gene50595:CDS | 50.0% |
| !! | TCGTGATGAGGGCATTAGCA+TGG | + | chr1.2:53925890-53925909 | MS.gene50595:CDS | 50.0% |
| AAGCTTGGGCAAGAGCTCAG+AGG | - | chr1.2:53928289-53928308 | None:intergenic | 55.0% | |
| GTGGAAAGAGCCTCTCCTCT+GGG | + | chr1.2:53926305-53926324 | MS.gene50595:CDS | 55.0% | |
| GTTCTTGAGTCCCAGAGGAG+AGG | - | chr1.2:53926318-53926337 | None:intergenic | 55.0% | |
| TTCTTTGATCCGGGACCACG+TGG | + | chr1.2:53926286-53926305 | MS.gene50595:CDS | 55.0% | |
| !! | TCCTAGCCTTGCAGCTGCTA+TGG | - | chr1.2:53925805-53925824 | None:intergenic | 55.0% |
| AGGCTCTTTCCACGTGGTCC+CGG | - | chr1.2:53926298-53926317 | None:intergenic | 60.0% | |
| AGTAGGTGCGGCAACAGCCA+TGG | + | chr1.2:53928065-53928084 | MS.gene50595:CDS | 60.0% | |
| CGTGGAAAGAGCCTCTCCTC+TGG | + | chr1.2:53926304-53926323 | MS.gene50595:CDS | 60.0% | |
| GAGGAGAGGCTCTTTCCACG+TGG | - | chr1.2:53926304-53926323 | None:intergenic | 60.0% | |
| GCCATAGCAGCTGCAAGGCT+AGG | + | chr1.2:53925801-53925820 | MS.gene50595:CDS | 60.0% | |
| GTAGGTGCGGCAACAGCCAT+GGG | + | chr1.2:53928066-53928085 | MS.gene50595:CDS | 60.0% | |
| GGCTTCCTCTCCACCTCCCA+AGG | + | chr1.2:53924344-53924363 | MS.gene50595:CDS | 65.0% | |
| ! | ACAGCCATGGGCTGTGGTGC+CGG | + | chr1.2:53928078-53928097 | MS.gene50595:CDS | 65.0% |
| CCTACCGGCACCACAGCCCA+TGG | - | chr1.2:53928085-53928104 | None:intergenic | 70.0% | |
| ! | GCGGCAACAGCCATGGGCTG+TGG | + | chr1.2:53928072-53928091 | MS.gene50595:CDS | 70.0% |
| !! | CCATGGGCTGTGGTGCCGGT+AGG | + | chr1.2:53928082-53928101 | MS.gene50595:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 53924333 | 53928344 | 53924333 | ID=MS.gene50595 |
| chr1.2 | mRNA | 53924333 | 53928344 | 53924333 | ID=MS.gene50595.t1;Parent=MS.gene50595 |
| chr1.2 | exon | 53924333 | 53924365 | 53924333 | ID=MS.gene50595.t1.exon1;Parent=MS.gene50595.t1 |
| chr1.2 | CDS | 53924333 | 53924365 | 53924333 | ID=cds.MS.gene50595.t1;Parent=MS.gene50595.t1 |
| chr1.2 | exon | 53925768 | 53926018 | 53925768 | ID=MS.gene50595.t1.exon2;Parent=MS.gene50595.t1 |
| chr1.2 | CDS | 53925768 | 53926018 | 53925768 | ID=cds.MS.gene50595.t1;Parent=MS.gene50595.t1 |
| chr1.2 | exon | 53926108 | 53926399 | 53926108 | ID=MS.gene50595.t1.exon3;Parent=MS.gene50595.t1 |
| chr1.2 | CDS | 53926108 | 53926399 | 53926108 | ID=cds.MS.gene50595.t1;Parent=MS.gene50595.t1 |
| chr1.2 | exon | 53927309 | 53927461 | 53927309 | ID=MS.gene50595.t1.exon4;Parent=MS.gene50595.t1 |
| chr1.2 | CDS | 53927309 | 53927461 | 53927309 | ID=cds.MS.gene50595.t1;Parent=MS.gene50595.t1 |
| chr1.2 | exon | 53927958 | 53928344 | 53927958 | ID=MS.gene50595.t1.exon5;Parent=MS.gene50595.t1 |
| chr1.2 | CDS | 53927958 | 53928344 | 53927958 | ID=cds.MS.gene50595.t1;Parent=MS.gene50595.t1 |
| Gene Sequence |
| Protein sequence |
