Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049272.t1 | XP_003609563.1 | 69.2 | 65 | 16 | 2 | 59 | 123 | 375 | 435 | 3.90E-09 | 71.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049272.t1 | Q8LBI9 | 84.2 | 38 | 6 | 0 | 60 | 97 | 368 | 405 | 3.7e-08 | 59.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049272.t1 | G7JJ10 | 69.2 | 65 | 16 | 2 | 59 | 123 | 375 | 435 | 2.8e-09 | 71.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene049272 | 0.800835 | 1.20E-48 | -1.69E-46 |
| MS.gene049254 | MS.gene049272 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene049435 | 0.801304 | 9.59E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene050156 | 0.831625 | 1.50E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene050355 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene050442 | 0.803939 | 2.74E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene050844 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene051147 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene052519 | 0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene052582 | 0.802472 | 5.52E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene052586 | 0.800039 | 1.74E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene053166 | 0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene054236 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene054291 | -0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene054468 | 0.820367 | 7.12E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene054651 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene055818 | 0.825664 | 4.14E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene056162 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene056174 | 0.808779 | 2.62E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene057026 | 0.829626 | 4.63E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene058037 | 0.834173 | 3.49E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene058625 | 0.823762 | 1.16E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene059272 | 0.848774 | 4.95E-60 | -1.69E-46 |
| MS.gene049272 | MS.gene060322 | 0.815922 | 7.21E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene06052 | 0.812311 | 4.52E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene061040 | -0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene062576 | 0.824624 | 7.30E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene062672 | 0.819422 | 1.17E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene06269 | 0.828355 | 9.41E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene064321 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene065039 | 0.806605 | 7.59E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene066335 | 0.817337 | 3.47E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene066782 | 0.819506 | 1.12E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene066784 | 0.817382 | 3.39E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene06698 | 0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene067208 | 0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene06723 | 0.820004 | 8.63E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene067410 | 0.805345 | 1.40E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene067932 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene068225 | 0.810676 | 1.02E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene068385 | 0.832718 | 8.06E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene068924 | 0.80796 | 3.92E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene06911 | 0.813104 | 3.03E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene06940 | 0.817088 | 3.95E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene069956 | 0.808025 | 3.79E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene070818 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene071322 | 0.809701 | 1.66E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene071442 | 0.804787 | 1.83E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene071444 | 0.800844 | 1.19E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene071551 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene072098 | 0.820043 | 8.45E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene072397 | -0.828763 | 7.50E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene072942 | 0.825103 | 5.62E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene07294 | 0.818681 | 1.73E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene073008 | 0.828929 | 6.84E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene073139 | 0.827219 | 1.77E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene073460 | 0.804081 | 2.56E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene073753 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene07876 | 0.826679 | 2.38E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene08853 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene08854 | 0.800095 | 1.69E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene08882 | 0.830225 | 3.31E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene09740 | 0.816701 | 4.83E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene20253 | 0.806253 | 9.00E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene20809 | 0.831081 | 2.04E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene20859 | 0.816686 | 4.87E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene21927 | 0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene21929 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene22271 | 0.804862 | 1.76E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene22609 | 0.804466 | 2.13E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene23190 | 0.814396 | 1.57E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene23422 | 0.818703 | 1.71E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene23656 | 0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene24067 | 0.805223 | 1.48E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene24642 | 0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene25151 | 0.826631 | 2.44E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene25706 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene25978 | 0.801194 | 1.01E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene26899 | 0.807516 | 4.87E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene27903 | 0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene28139 | 0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene28514 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene29022 | 0.81018 | 1.31E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene29060 | 0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene29086 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene29489 | 0.811468 | 6.90E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene30301 | 0.800425 | 1.45E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene30368 | 0.80764 | 4.58E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene30672 | 0.802613 | 5.16E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene30739 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene30970 | 0.817626 | 2.99E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene31142 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene31231 | 0.840192 | 1.01E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene31283 | 0.839928 | 1.18E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene32231 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene32874 | 0.808873 | 2.50E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene33624 | 0.83852 | 2.74E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene33853 | 0.80119 | 1.01E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene34667 | 0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene35264 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene35408 | 0.805858 | 1.09E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene35631 | 0.804289 | 2.32E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene35823 | 0.802265 | 6.09E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene35864 | 0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene37228 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene37612 | 0.813414 | 2.59E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene37944 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene40068 | 0.814341 | 1.62E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene40079 | 0.809647 | 1.71E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene40709 | 0.807447 | 5.03E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene43372 | 0.814 | 1.92E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene44510 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene44986 | 0.821053 | 4.95E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene45193 | 0.811657 | 6.27E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene45194 | 0.811223 | 7.80E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene45405 | 0.814931 | 1.20E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene45507 | 0.809486 | 1.85E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene47851 | 0.800946 | 1.14E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene47858 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene48897 | 0.804616 | 1.98E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene48919 | 0.826258 | 2.99E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene49281 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene49283 | 0.806708 | 7.22E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene49665 | 0.807924 | 3.98E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene50031 | 0.840298 | 9.46E-58 | -1.69E-46 |
| MS.gene049272 | MS.gene50493 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene50571 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene51139 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene51511 | 0.815662 | 8.24E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene52130 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene52671 | 0.819449 | 1.15E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene52750 | 0.80776 | 4.32E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene53064 | 0.819361 | 1.21E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene53321 | 0.808419 | 3.13E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene53467 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene53704 | 0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene53771 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene53853 | 0.802789 | 4.75E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene54090 | 0.810866 | 9.32E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene54197 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene54656 | 0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene54686 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene55406 | 0.810061 | 1.39E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene55539 | 0.803688 | 3.09E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene55540 | 0.803725 | 3.04E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene55778 | 0.832455 | 9.36E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene56537 | 0.805979 | 1.03E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene57127 | 0.813075 | 3.08E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene57178 | 0.818752 | 1.66E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene57469 | 0.803627 | 3.19E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene58547 | 0.830389 | 3.02E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene58638 | 0.815508 | 8.92E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene58686 | 0.847573 | 1.06E-59 | -1.69E-46 |
| MS.gene049272 | MS.gene58802 | 0.818223 | 2.19E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene58992 | 0.806107 | 9.66E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene59416 | 0.800807 | 1.21E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene60566 | 0.821838 | 3.26E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene60827 | 0.830913 | 2.25E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene61202 | 0.801718 | 7.89E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene61228 | 0.805557 | 1.26E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene64249 | 0.817043 | 4.05E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene65271 | 0.810029 | 1.41E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene66412 | 0.800171 | 1.63E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene67746 | 0.806028 | 1.00E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene68824 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene68826 | 0.836325 | 1.00E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene69794 | 0.809492 | 1.84E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene72268 | 0.809777 | 1.60E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene73564 | 0.803212 | 3.88E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene73596 | 0.802032 | 6.80E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene74367 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene74370 | 0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene75184 | 0.802928 | 4.44E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene75619 | -0.813178 | 2.92E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene75909 | 0.819886 | 9.17E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene76158 | 0.823742 | 1.18E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene76244 | 0.80346 | 3.45E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene77588 | 0.825129 | 5.55E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene77781 | 0.810838 | 9.45E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene77785 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene78512 | 0.805964 | 1.04E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene80548 | 0.836764 | 7.73E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene80641 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene80853 | 0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene81334 | 0.804412 | 2.19E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene83055 | 0.804051 | 2.60E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene83357 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene049272 | MS.gene83538 | 0.811323 | 7.41E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene83812 | 0.804913 | 1.72E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene84705 | 0.820048 | 8.42E-53 | -1.69E-46 |
| MS.gene049272 | MS.gene84732 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene84803 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene84865 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene85287 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene86336 | 0.805119 | 1.56E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene87377 | 0.806901 | 6.57E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene88171 | 0.817754 | 2.80E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene90022 | 0.817668 | 2.93E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene90179 | 0.802252 | 6.13E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene90823 | 0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene92383 | 0.81108 | 8.37E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene92642 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene93041 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene93311 | 0.832086 | 1.15E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene93764 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene94474 | 0.813517 | 2.46E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene96146 | 0.874491 | 6.48E-68 | -1.69E-46 |
| MS.gene049272 | MS.gene96791 | 0.800618 | 1.32E-48 | -1.69E-46 |
| MS.gene049272 | MS.gene97157 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene97344 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene97439 | 0.801775 | 7.68E-49 | -1.69E-46 |
| MS.gene049272 | MS.gene98087 | 0.82957 | 4.78E-55 | -1.69E-46 |
| MS.gene049272 | MS.gene98088 | 0.833443 | 5.32E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene98611 | 0.819708 | 1.01E-52 | -1.69E-46 |
| MS.gene049272 | MS.gene98927 | 0.803911 | 2.78E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049272.t1 | MTR_4g118610 | 69.231 | 65 | 16 | 2 | 59 | 123 | 375 | 435 | 1.81e-17 | 77.4 |
| MS.gene049272.t1 | MTR_4g118610 | 92.308 | 39 | 3 | 0 | 59 | 97 | 375 | 413 | 5.71e-17 | 75.9 |
| MS.gene049272.t1 | MTR_2g020710 | 52.308 | 65 | 27 | 2 | 59 | 123 | 372 | 432 | 2.38e-11 | 60.1 |
| MS.gene049272.t1 | MTR_2g020710 | 58.696 | 46 | 19 | 0 | 59 | 104 | 372 | 417 | 4.56e-11 | 59.3 |
| MS.gene049272.t1 | MTR_2g020710 | 52.308 | 65 | 27 | 2 | 59 | 123 | 283 | 343 | 6.66e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049272.t1 | AT5G18840 | 82.051 | 39 | 7 | 0 | 60 | 98 | 368 | 406 | 1.91e-13 | 66.2 |
Find 21 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCAACCCTTCCAGCTTCT+TGG | 0.243031 | 3.3:-79884252 | None:intergenic |
| ATTAGCTGTTGTCGGCATTC+TGG | 0.328804 | 3.3:+79884683 | MS.gene049272:CDS |
| TTGGAATGGGACCGGTTCCT+TGG | 0.379291 | 3.3:+79884837 | MS.gene049272:CDS |
| GTGTGTTGCCATTATGTTGT+TGG | 0.386442 | 3.3:+79884221 | MS.gene049272:CDS |
| TGATAAATCCAACAACATAA+TGG | 0.420838 | 3.3:-79884229 | None:intergenic |
| ATGCCGACAACAGCTAATAT+TGG | 0.437641 | 3.3:-79884678 | None:intergenic |
| GTTGGCAGTACTGCTGCTGC+TGG | 0.442298 | 3.3:+79885033 | MS.gene049272:CDS |
| TGGAATGGGACCGGTTCCTT+GGG | 0.453222 | 3.3:+79884838 | MS.gene049272:CDS |
| ATCCAAGTCACACACAATCT+TGG | 0.455959 | 3.3:+79884969 | MS.gene049272:CDS |
| TACATTATTACCCAAGGAAC+CGG | 0.469917 | 3.3:-79884848 | None:intergenic |
| TGGATTTATCACCAAGAAGC+TGG | 0.490960 | 3.3:+79884241 | MS.gene049272:CDS |
| CACCAAGATTGTGTGTGACT+TGG | 0.490961 | 3.3:-79884971 | None:intergenic |
| CACCAAGAAGCTGGAAGGGT+TGG | 0.493905 | 3.3:+79884250 | MS.gene049272:CDS |
| TCCTTGGGTAATAATGTATG+AGG | 0.499064 | 3.3:+79884853 | MS.gene049272:CDS |
| TCAGAACTTGCTGCTTGAGT+TGG | 0.516261 | 3.3:+79884653 | MS.gene049272:CDS |
| GTACCAATATTAGCTGTTGT+CGG | 0.525827 | 3.3:+79884675 | MS.gene049272:CDS |
| GAGATTGCTTGATTTGCAGA+TGG | 0.540081 | 3.3:+79884015 | MS.gene049272:CDS |
| TTTATCACCAAGAAGCTGGA+AGG | 0.559494 | 3.3:+79884245 | MS.gene049272:CDS |
| ACCTCATACATTATTACCCA+AGG | 0.600251 | 3.3:-79884854 | None:intergenic |
| TTATCACCAAGAAGCTGGAA+GGG | 0.610575 | 3.3:+79884246 | MS.gene049272:CDS |
| GAGGGAAATTCGTTATGGCG+AGG | 0.635294 | 3.3:+79883993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTGAAAATGTTAATCA+AGG | + | chr3.3:79884712-79884731 | MS.gene049272:intron | 15.0% |
| !!! | GTTGTTTAAATTTGTTTATT+TGG | + | chr3.3:79884128-79884147 | MS.gene049272:intron | 15.0% |
| !!! | TTTGATAATACCATTAATAA+GGG | + | chr3.3:79884489-79884508 | MS.gene049272:intron | 15.0% |
| !!! | TTTTGATAATACCATTAATA+AGG | + | chr3.3:79884488-79884507 | MS.gene049272:intron | 15.0% |
| !! | ATACAATTTGATACAATTTC+AGG | - | chr3.3:79884792-79884811 | None:intergenic | 20.0% |
| !! | ATATGCTTACGATAAAAATA+TGG | + | chr3.3:79884077-79884096 | MS.gene049272:CDS | 20.0% |
| !! | ATTGTATGAGAAATTCATAT+AGG | - | chr3.3:79884315-79884334 | None:intergenic | 20.0% |
| !! | CATATATTAAATTGAATGAC+AGG | + | chr3.3:79884370-79884389 | MS.gene049272:intron | 20.0% |
| !! | TTGTATGAGAAATTCATATA+GGG | - | chr3.3:79884314-79884333 | None:intergenic | 20.0% |
| !!! | AATTTGTTTATTTGGCATTT+CGG | + | chr3.3:79884136-79884155 | MS.gene049272:intron | 20.0% |
| !!! | TTGATAATACCATTAATAAG+GGG | + | chr3.3:79884490-79884509 | MS.gene049272:intron | 20.0% |
| ! | GAAAATGTTAATCAAGGAAT+TGG | + | chr3.3:79884718-79884737 | MS.gene049272:intron | 25.0% |
| ! | TGATAAATCCAACAACATAA+TGG | - | chr3.3:79884232-79884251 | None:intergenic | 25.0% |
| ! | TGCATATAAACACTTCTATT+AGG | - | chr3.3:79884521-79884540 | None:intergenic | 25.0% |
| ! | TTACCGTTATAACTTATAAG+CGG | - | chr3.3:79884446-79884465 | None:intergenic | 25.0% |
| !! | AACTTTGCTATATTATTCCA+TGG | + | chr3.3:79884623-79884642 | MS.gene049272:intron | 25.0% |
| AGACCGCTTATAAGTTATAA+CGG | + | chr3.3:79884440-79884459 | MS.gene049272:intron | 30.0% | |
| CTTATTAACAATTGTGCTCA+TGG | + | chr3.3:79884931-79884950 | MS.gene049272:intron | 30.0% | |
| GAGATATAGTGTACATCATT+TGG | + | chr3.3:79884184-79884203 | MS.gene049272:intron | 30.0% | |
| TATGCAAAAAGTTGCAGATA+GGG | + | chr3.3:79884276-79884295 | MS.gene049272:CDS | 30.0% | |
| TCCAAACTTATCCATCAAAA+TGG | - | chr3.3:79884417-79884436 | None:intergenic | 30.0% | |
| ! | ACAGGTTCCATTCATTATTT+TGG | + | chr3.3:79884388-79884407 | MS.gene049272:intron | 30.0% |
| ! | CAGGTTCCATTCATTATTTT+GGG | + | chr3.3:79884389-79884408 | MS.gene049272:intron | 30.0% |
| !! | AAGCACACTTAATGGTTTTA+TGG | + | chr3.3:79884892-79884911 | MS.gene049272:intron | 30.0% |
| !! | AGAAGTGTTTATATGCATGT+AGG | + | chr3.3:79884524-79884543 | MS.gene049272:intron | 30.0% |
| AAAAAATAAGCAAGCTGCAC+AGG | - | chr3.3:79884999-79885018 | None:intergenic | 35.0% | |
| AAAAATAAGCAAGCTGCACA+GGG | - | chr3.3:79884998-79885017 | None:intergenic | 35.0% | |
| ACCTCATACATTATTACCCA+AGG | - | chr3.3:79884857-79884876 | None:intergenic | 35.0% | |
| ATGCAAAAAGTTGCAGATAG+GGG | + | chr3.3:79884277-79884296 | MS.gene049272:CDS | 35.0% | |
| ATGGCTCCCAAAATAATGAA+TGG | - | chr3.3:79884398-79884417 | None:intergenic | 35.0% | |
| ATTTGGCAAAGCACACTTAA+TGG | + | chr3.3:79884884-79884903 | MS.gene049272:intron | 35.0% | |
| CTATGCAAAAAGTTGCAGAT+AGG | + | chr3.3:79884275-79884294 | MS.gene049272:CDS | 35.0% | |
| GCTATATTATTCCATGGATC+AGG | + | chr3.3:79884629-79884648 | MS.gene049272:intron | 35.0% | |
| GTACCAATATTAGCTGTTGT+CGG | + | chr3.3:79884675-79884694 | MS.gene049272:CDS | 35.0% | |
| TACATTATTACCCAAGGAAC+CGG | - | chr3.3:79884851-79884870 | None:intergenic | 35.0% | |
| TAGGCATTTCCCCTTATTAA+TGG | - | chr3.3:79884502-79884521 | None:intergenic | 35.0% | |
| TCCTTGGGTAATAATGTATG+AGG | + | chr3.3:79884853-79884872 | MS.gene049272:CDS | 35.0% | |
| ! | ATTTCGGTTGAAGCATTTAG+TGG | + | chr3.3:79884152-79884171 | MS.gene049272:intron | 35.0% |
| ! | TGTATGAGGTATGTGTCATT+TGG | + | chr3.3:79884867-79884886 | MS.gene049272:intron | 35.0% |
| !! | GCCATTTTGATGGATAAGTT+TGG | + | chr3.3:79884413-79884432 | MS.gene049272:intron | 35.0% |
| !! | TATTTTGGGAGCCATTTTGA+TGG | + | chr3.3:79884403-79884422 | MS.gene049272:intron | 35.0% |
| !!! | CAGCTTGCTTATTTTTTGCT+TGG | + | chr3.3:79885002-79885021 | MS.gene049272:CDS | 35.0% |
| !!! | GCTTATTTTTTGCTTGGTAG+AGG | + | chr3.3:79885008-79885027 | MS.gene049272:CDS | 35.0% |
| ATCCAAGTCACACACAATCT+TGG | + | chr3.3:79884969-79884988 | MS.gene049272:CDS | 40.0% | |
| ATGCCGACAACAGCTAATAT+TGG | - | chr3.3:79884681-79884700 | None:intergenic | 40.0% | |
| GTGTGTTGCCATTATGTTGT+TGG | + | chr3.3:79884221-79884240 | MS.gene049272:CDS | 40.0% | |
| TGGATTTATCACCAAGAAGC+TGG | + | chr3.3:79884241-79884260 | MS.gene049272:CDS | 40.0% | |
| TTATCACCAAGAAGCTGGAA+GGG | + | chr3.3:79884246-79884265 | MS.gene049272:CDS | 40.0% | |
| TTTATCACCAAGAAGCTGGA+AGG | + | chr3.3:79884245-79884264 | MS.gene049272:CDS | 40.0% | |
| ! | AGCAGCATTTTCGATTGGAA+TGG | + | chr3.3:79884823-79884842 | MS.gene049272:CDS | 40.0% |
| ! | ATTTTCGATTGGAATGGGAC+CGG | + | chr3.3:79884829-79884848 | MS.gene049272:CDS | 40.0% |
| ! | GCAGCATTTTCGATTGGAAT+GGG | + | chr3.3:79884824-79884843 | MS.gene049272:CDS | 40.0% |
| ! | TACGTAGCAGCATTTTCGAT+TGG | + | chr3.3:79884818-79884837 | MS.gene049272:CDS | 40.0% |
| ! | TTTTGCTTGGTAGAGGTTGT+TGG | + | chr3.3:79885015-79885034 | MS.gene049272:CDS | 40.0% |
| !! | GAGATTGCTTGATTTGCAGA+TGG | + | chr3.3:79884015-79884034 | MS.gene049272:CDS | 40.0% |
| ATTAGCTGTTGTCGGCATTC+TGG | + | chr3.3:79884683-79884702 | MS.gene049272:CDS | 45.0% | |
| CACCAAGATTGTGTGTGACT+TGG | - | chr3.3:79884974-79884993 | None:intergenic | 45.0% | |
| TGCATGTAGGCTTCAACAAG+TGG | + | chr3.3:79884537-79884556 | MS.gene049272:intron | 45.0% | |
| ! | CAAGTTCTGATCCTGATCCA+TGG | - | chr3.3:79884643-79884662 | None:intergenic | 45.0% |
| !! | TCAGAACTTGCTGCTTGAGT+TGG | + | chr3.3:79884653-79884672 | MS.gene049272:CDS | 45.0% |
| AACCAACCCTTCCAGCTTCT+TGG | - | chr3.3:79884255-79884274 | None:intergenic | 50.0% | |
| CACCAAGAAGCTGGAAGGGT+TGG | + | chr3.3:79884250-79884269 | MS.gene049272:CDS | 55.0% | |
| ! | TGGAATGGGACCGGTTCCTT+GGG | + | chr3.3:79884838-79884857 | MS.gene049272:CDS | 55.0% |
| ! | TTGGAATGGGACCGGTTCCT+TGG | + | chr3.3:79884837-79884856 | MS.gene049272:CDS | 55.0% |
| GTTGGCAGTACTGCTGCTGC+TGG | + | chr3.3:79885033-79885052 | MS.gene049272:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 79884007 | 79885061 | 79884007 | ID=MS.gene049272 |
| chr3.3 | mRNA | 79884007 | 79885061 | 79884007 | ID=MS.gene049272.t1;Parent=MS.gene049272 |
| chr3.3 | exon | 79884007 | 79884098 | 79884007 | ID=MS.gene049272.t1.exon1;Parent=MS.gene049272.t1 |
| chr3.3 | CDS | 79884007 | 79884098 | 79884007 | ID=cds.MS.gene049272.t1;Parent=MS.gene049272.t1 |
| chr3.3 | exon | 79884217 | 79884298 | 79884217 | ID=MS.gene049272.t1.exon2;Parent=MS.gene049272.t1 |
| chr3.3 | CDS | 79884217 | 79884298 | 79884217 | ID=cds.MS.gene049272.t1;Parent=MS.gene049272.t1 |
| chr3.3 | exon | 79884651 | 79884704 | 79884651 | ID=MS.gene049272.t1.exon3;Parent=MS.gene049272.t1 |
| chr3.3 | CDS | 79884651 | 79884704 | 79884651 | ID=cds.MS.gene049272.t1;Parent=MS.gene049272.t1 |
| chr3.3 | exon | 79884815 | 79884874 | 79884815 | ID=MS.gene049272.t1.exon4;Parent=MS.gene049272.t1 |
| chr3.3 | CDS | 79884815 | 79884874 | 79884815 | ID=cds.MS.gene049272.t1;Parent=MS.gene049272.t1 |
| chr3.3 | exon | 79884957 | 79885061 | 79884957 | ID=MS.gene049272.t1.exon5;Parent=MS.gene049272.t1 |
| chr3.3 | CDS | 79884957 | 79885061 | 79884957 | ID=cds.MS.gene049272.t1;Parent=MS.gene049272.t1 |
| Gene Sequence |
| Protein sequence |
