Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57336.t1 | KEH20777.1 | 97 | 330 | 6 | 1 | 1 | 330 | 1 | 326 | 8.80E-175 | 622.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57336.t1 | Q8L936 | 49.6 | 343 | 148 | 8 | 8 | 328 | 9 | 348 | 4.1e-72 | 273.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57336.t1 | A0A072TTL4 | 97.0 | 330 | 6 | 1 | 1 | 330 | 1 | 326 | 6.3e-175 | 622.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene57336 | 0.821743 | 3.43E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene57336 | 0.868882 | 4.69E-66 | -1.69E-46 |
| MS.gene050105 | MS.gene57336 | 0.813463 | 2.53E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene57336 | 0.801955 | 7.05E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene57336 | 0.819687 | 1.02E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene57336 | 0.851795 | 7.03E-61 | -1.69E-46 |
| MS.gene050760 | MS.gene57336 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene050826 | MS.gene57336 | 0.815355 | 9.65E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene57336 | 0.822218 | 2.67E-53 | -1.69E-46 |
| MS.gene050962 | MS.gene57336 | 0.84577 | 3.30E-59 | -1.69E-46 |
| MS.gene050963 | MS.gene57336 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene57336 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene57336 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene57336 | 0.837248 | 5.81E-57 | -1.69E-46 |
| MS.gene051924 | MS.gene57336 | -0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene051926 | MS.gene57336 | -0.827851 | 1.24E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene57336 | 0.820429 | 6.89E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene57336 | 0.841663 | 4.15E-58 | -1.69E-46 |
| MS.gene052534 | MS.gene57336 | 0.810421 | 1.16E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene57336 | 0.814119 | 1.81E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene57336 | 0.86019 | 2.45E-63 | -1.69E-46 |
| MS.gene052675 | MS.gene57336 | 0.862432 | 5.09E-64 | -1.69E-46 |
| MS.gene052677 | MS.gene57336 | 0.863553 | 2.29E-64 | -1.69E-46 |
| MS.gene052965 | MS.gene57336 | -0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene57336 | 0.836829 | 7.44E-57 | -1.69E-46 |
| MS.gene05414 | MS.gene57336 | 0.824837 | 6.50E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene57336 | 0.84559 | 3.69E-59 | -1.69E-46 |
| MS.gene054236 | MS.gene57336 | 0.80971 | 1.65E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene57336 | 0.819512 | 1.12E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene57336 | -0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene054405 | MS.gene57336 | 0.818205 | 2.21E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene57336 | 0.813049 | 3.12E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene57336 | 0.825301 | 5.05E-54 | -1.69E-46 |
| MS.gene054651 | MS.gene57336 | 0.829834 | 4.12E-55 | -1.69E-46 |
| MS.gene055227 | MS.gene57336 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene055228 | MS.gene57336 | 0.826467 | 2.67E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene57336 | 0.840987 | 6.24E-58 | -1.69E-46 |
| MS.gene055724 | MS.gene57336 | 0.804391 | 2.21E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene57336 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene056162 | MS.gene57336 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene57336 | 0.804088 | 2.56E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene57336 | 0.809086 | 2.25E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene57336 | 0.812044 | 5.17E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene57336 | 0.836133 | 1.12E-56 | -1.69E-46 |
| MS.gene057012 | MS.gene57336 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene057155 | MS.gene57336 | 0.800435 | 1.44E-48 | -1.69E-46 |
| MS.gene057156 | MS.gene57336 | -0.831471 | 1.64E-55 | -1.69E-46 |
| MS.gene057208 | MS.gene57336 | 0.849355 | 3.41E-60 | -1.69E-46 |
| MS.gene05761 | MS.gene57336 | 0.806025 | 1.01E-49 | -1.69E-46 |
| MS.gene058223 | MS.gene57336 | -0.837058 | 6.50E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene57336 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene059161 | MS.gene57336 | 0.823584 | 1.28E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene57336 | 0.847246 | 1.31E-59 | -1.69E-46 |
| MS.gene060373 | MS.gene57336 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene57336 | 0.829842 | 4.10E-55 | -1.69E-46 |
| MS.gene060850 | MS.gene57336 | 0.839359 | 1.66E-57 | -1.69E-46 |
| MS.gene060851 | MS.gene57336 | 0.840305 | 9.42E-58 | -1.69E-46 |
| MS.gene060852 | MS.gene57336 | 0.83498 | 2.19E-56 | -1.69E-46 |
| MS.gene060932 | MS.gene57336 | 0.816516 | 5.31E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57336.t1 | MTR_8g089850 | 96.970 | 330 | 6 | 1 | 1 | 330 | 1 | 326 | 0.0 | 647 |
| MS.gene57336.t1 | MTR_3g086670 | 62.349 | 332 | 116 | 6 | 3 | 330 | 2 | 328 | 1.55e-136 | 390 |
| MS.gene57336.t1 | MTR_3g099670 | 38.699 | 292 | 168 | 5 | 9 | 292 | 10 | 298 | 5.12e-57 | 188 |
| MS.gene57336.t1 | MTR_3g106900 | 31.579 | 152 | 99 | 3 | 1 | 149 | 1 | 150 | 7.57e-16 | 78.6 |
| MS.gene57336.t1 | MTR_4g127440 | 25.097 | 259 | 177 | 7 | 27 | 274 | 30 | 282 | 3.83e-15 | 76.6 |
| MS.gene57336.t1 | MTR_4g115420 | 28.061 | 196 | 124 | 6 | 2 | 190 | 5 | 190 | 2.86e-13 | 70.9 |
| MS.gene57336.t1 | MTR_2g037980 | 27.746 | 173 | 113 | 4 | 27 | 190 | 30 | 199 | 3.45e-13 | 70.5 |
| MS.gene57336.t1 | MTR_8g008860 | 30.065 | 153 | 101 | 3 | 1 | 149 | 1 | 151 | 3.47e-13 | 70.5 |
| MS.gene57336.t1 | MTR_2g008170 | 29.870 | 154 | 100 | 4 | 1 | 149 | 1 | 151 | 8.77e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57336.t1 | AT4G40080 | 48.864 | 352 | 154 | 9 | 1 | 329 | 1 | 349 | 5.05e-98 | 294 |
| MS.gene57336.t1 | AT5G10410 | 34.432 | 273 | 151 | 10 | 7 | 262 | 6 | 267 | 8.08e-32 | 122 |
| MS.gene57336.t1 | AT5G65370 | 29.181 | 281 | 168 | 9 | 1 | 262 | 1 | 269 | 8.24e-24 | 99.4 |
| MS.gene57336.t1 | AT5G57200 | 24.125 | 257 | 180 | 6 | 27 | 274 | 30 | 280 | 8.09e-14 | 72.8 |
| MS.gene57336.t1 | AT4G32285 | 29.530 | 149 | 100 | 3 | 4 | 149 | 3 | 149 | 1.27e-13 | 72.0 |
| MS.gene57336.t1 | AT4G32285 | 29.530 | 149 | 100 | 3 | 4 | 149 | 3 | 149 | 1.27e-13 | 72.0 |
| MS.gene57336.t1 | AT2G25430 | 29.730 | 148 | 99 | 3 | 5 | 149 | 4 | 149 | 1.44e-13 | 72.0 |
| MS.gene57336.t1 | AT4G25940 | 30.247 | 162 | 106 | 4 | 10 | 167 | 11 | 169 | 2.85e-13 | 70.9 |
| MS.gene57336.t1 | AT4G02650 | 30.345 | 145 | 94 | 3 | 10 | 149 | 10 | 152 | 3.07e-13 | 70.9 |
| MS.gene57336.t1 | AT2G01600 | 33.333 | 129 | 81 | 4 | 31 | 157 | 34 | 159 | 5.48e-13 | 70.1 |
| MS.gene57336.t1 | AT1G03050 | 30.345 | 145 | 94 | 3 | 10 | 149 | 10 | 152 | 3.53e-12 | 67.8 |
| MS.gene57336.t1 | AT1G14910 | 30.233 | 129 | 85 | 4 | 31 | 157 | 34 | 159 | 5.96e-11 | 63.9 |
Find 0 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTCTTTGATTATGTTTATT+AGG | - | 57390:10202-10221 | None:intergenic | 20.0% |
| ! | ATATTAGGTTTCTTCTTTCT+TGG | + | 57390:10635-10654 | MS.gene57336:CDS | 25.0% |
| ! | TATTAGGTTTCTTCTTTCTT+GGG | + | 57390:10636-10655 | MS.gene57336:CDS | 25.0% |
| AGTTGAAGTGAATGAGTTTA+AGG | + | 57390:10862-10881 | MS.gene57336:CDS | 30.0% | |
| ATAATACAAATCCAACTTCG+TGG | + | 57390:10549-10568 | MS.gene57336:CDS | 30.0% | |
| CTTTGTACTTCACGAATATT+AGG | + | 57390:10620-10639 | MS.gene57336:CDS | 30.0% | |
| TAATACAAATCCAACTTCGT+GGG | + | 57390:10550-10569 | MS.gene57336:CDS | 30.0% | |
| TATTATGTCGAAAATTCGAG+AGG | - | 57390:10535-10554 | None:intergenic | 30.0% | |
| !! | AATTGGTTTGTTGTTTGAAG+AGG | + | 57390:10921-10940 | MS.gene57336:CDS | 30.0% |
| !! | GAATTTGGTTTGTGAAGATT+GGG | + | 57390:10817-10836 | MS.gene57336:CDS | 30.0% |
| !! | TGAATTTGGTTTGTGAAGAT+TGG | + | 57390:10816-10835 | MS.gene57336:CDS | 30.0% |
| AAGTGAATGAGTTTAAGGAG+AGG | + | 57390:10867-10886 | MS.gene57336:CDS | 35.0% | |
| AATGAGTTTAAGGAGAGGTT+AGG | + | 57390:10872-10891 | MS.gene57336:CDS | 35.0% | |
| ATAAGGAGGGAAGAAAGTTA+AGG | + | 57390:11065-11084 | MS.gene57336:CDS | 35.0% | |
| ATGAGTTTAAGGAGAGGTTA+GGG | + | 57390:10873-10892 | MS.gene57336:CDS | 35.0% | |
| ATTTGGAGAAGCTGTTGAAT+TGG | + | 57390:10904-10923 | MS.gene57336:CDS | 35.0% | |
| GAACAAGAACAAGAACAAGT+TGG | + | 57390:10781-10800 | MS.gene57336:CDS | 35.0% | |
| GTTAAGATAGTTTCTACCAC+CGG | - | 57390:10513-10532 | None:intergenic | 35.0% | |
| GTTGAAGGAGTTTGATTCTT+TGG | + | 57390:10712-10731 | MS.gene57336:CDS | 35.0% | |
| GTTTCTTGTCTTACAAACTG+TGG | + | 57390:10686-10705 | MS.gene57336:CDS | 35.0% | |
| TAAGGTTTAGTGAGTCTGAT+CGG | + | 57390:11083-11102 | MS.gene57336:CDS | 35.0% | |
| TTATCTGTTTACCCTTCAAC+CGG | + | 57390:10491-10510 | MS.gene57336:CDS | 35.0% | |
| TTGTTCATGTTCACTTGATC+TGG | - | 57390:10767-10786 | None:intergenic | 35.0% | |
| ! | AATGGAGGTGTATAAGGAAA+AGG | + | 57390:11033-11052 | MS.gene57336:CDS | 35.0% |
| ! | ATGGAGGTGTATAAGGAAAA+GGG | + | 57390:11034-11053 | MS.gene57336:CDS | 35.0% |
| !! | TACAAACTGTGGTTTGTTGA+AGG | + | 57390:10697-10716 | MS.gene57336:CDS | 35.0% |
| AGGTGTATAAGGAAAAGGGT+AGG | + | 57390:11038-11057 | MS.gene57336:CDS | 40.0% | |
| CTTGAAGTATGAAGCTTCCA+TGG | - | 57390:10466-10485 | None:intergenic | 40.0% | |
| CTTGGGAAATCTTTGTGTGA+CGG | + | 57390:10653-10672 | MS.gene57336:CDS | 40.0% | |
| GGTGGATGAGATAGTGAATT+TGG | + | 57390:10802-10821 | MS.gene57336:CDS | 40.0% | |
| GGTGTATAAGGAAAAGGGTA+GGG | + | 57390:11039-11058 | MS.gene57336:CDS | 40.0% | |
| GTTCATCATATCATCAGCCA+TGG | + | 57390:10446-10465 | MS.gene57336:CDS | 40.0% | |
| TTCGTGGGAACTTTCTTGTT+GGG | + | 57390:10565-10584 | MS.gene57336:CDS | 40.0% | |
| ! | AGGTTAGGGTGTTTGGAATT+TGG | + | 57390:10887-10906 | MS.gene57336:CDS | 40.0% |
| ! | CAAGAACAAGAACAAGTTGG+TGG | + | 57390:10784-10803 | MS.gene57336:CDS | 40.0% |
| ! | GTTTGATTCTTTGGTGACAC+TGG | + | 57390:10721-10740 | MS.gene57336:CDS | 40.0% |
| !! | GGTTTGTTGTTTGAAGAGGT+TGG | + | 57390:10925-10944 | MS.gene57336:CDS | 40.0% |
| !! | TTGTTGTTTGAAGAGGTTGG+AGG | + | 57390:10928-10947 | MS.gene57336:CDS | 40.0% |
| !! | TTTGGTTTGTGAAGATTGGG+TGG | + | 57390:10820-10839 | MS.gene57336:CDS | 40.0% |
| !!! | ATGATTTTGGAGTCACAGCA+AGG | + | 57390:10971-10990 | MS.gene57336:CDS | 40.0% |
| !!! | CGTTGTTGGTGTTTTGAAGA+CGG | - | 57390:10397-10416 | None:intergenic | 40.0% |
| !!! | TGATTTTGGAGTCACAGCAA+GGG | + | 57390:10972-10991 | MS.gene57336:CDS | 40.0% |
| AACTTTCTTGTTGGGTACGC+TGG | + | 57390:10573-10592 | MS.gene57336:CDS | 45.0% | |
| AGAGAGGTGAAGGATAAGGT+TGG | + | 57390:11010-11029 | MS.gene57336:CDS | 45.0% | |
| CAAGAAAGTTCCCACGAAGT+TGG | - | 57390:10563-10582 | None:intergenic | 45.0% | |
| CTCCTTCTTAGAACTCCTCA+TGG | + | 57390:10370-10389 | MS.gene57336:CDS | 45.0% | |
| CTTCGTGGGAACTTTCTTGT+TGG | + | 57390:10564-10583 | MS.gene57336:CDS | 45.0% | |
| GAAGGATAAGGTTGGAATGG+AGG | + | 57390:11018-11037 | MS.gene57336:CDS | 45.0% | |
| GAGCGTGGAGATATGTTTGT+GGG | - | 57390:10315-10334 | None:intergenic | 45.0% | |
| GATGAGAGACTTGAGAGCAA+CGG | - | 57390:10423-10442 | None:intergenic | 45.0% | |
| GGTGAAGGATAAGGTTGGAA+TGG | + | 57390:11015-11034 | MS.gene57336:CDS | 45.0% | |
| GTGGAGATATGTTTGTGGGT+GGG | - | 57390:10311-10330 | None:intergenic | 45.0% | |
| TCAGTTCTCGTGATTCCCTT+TGG | + | 57390:11122-11141 | MS.gene57336:CDS | 45.0% | |
| TTGGGTGGTGATAGAAACTG+TGG | + | 57390:10835-10854 | MS.gene57336:CDS | 45.0% | |
| ! | AGTTTCTACCACCGGTTGAA+GGG | - | 57390:10505-10524 | None:intergenic | 45.0% |
| ! | GGTTGGAATGGAGGTGTATA+AGG | + | 57390:11027-11046 | MS.gene57336:CDS | 45.0% |
| ! | GTTGGAGGAGTGTAAAGAGA+GGG | + | 57390:10943-10962 | MS.gene57336:CDS | 45.0% |
| ! | TAAGGAGAGGTTAGGGTGTT+TGG | + | 57390:10880-10899 | MS.gene57336:CDS | 45.0% |
| ! | TAGTTTCTACCACCGGTTGA+AGG | - | 57390:10506-10525 | None:intergenic | 45.0% |
| ! | TCTTTGGTGACACTGGTTGA+GGG | + | 57390:10728-10747 | MS.gene57336:CDS | 45.0% |
| ! | TTCTTTGGTGACACTGGTTG+AGG | + | 57390:10727-10746 | MS.gene57336:CDS | 45.0% |
| !! | AGAGAGGGTGGTGATGATTT+TGG | + | 57390:10958-10977 | MS.gene57336:CDS | 45.0% |
| !! | CATGAGGAGTTCTAAGAAGG+AGG | - | 57390:10372-10391 | None:intergenic | 45.0% |
| !! | GAGTTCTAAGAAGGAGGAAG+CGG | - | 57390:10366-10385 | None:intergenic | 45.0% |
| !! | GTCCATGAGGAGTTCTAAGA+AGG | - | 57390:10375-10394 | None:intergenic | 45.0% |
| !!! | TGTTTTGAAGACGGTCCATG+AGG | - | 57390:10388-10407 | None:intergenic | 45.0% |
| AAAGGGTAGGGTGCATAAGG+AGG | + | 57390:11051-11070 | MS.gene57336:CDS | 50.0% | |
| AAGGGTAGGGTGCATAAGGA+GGG | + | 57390:11052-11071 | MS.gene57336:CDS | 50.0% | |
| ACAGCAAGGGTTGTGGGATT+CGG | + | 57390:10985-11004 | MS.gene57336:CDS | 50.0% | |
| ACCTTCCAGAGGGAAACCAA+AGG | - | 57390:11141-11160 | None:intergenic | 50.0% | |
| CCTTCCAGAGGGAAACCAAA+GGG | - | 57390:11140-11159 | None:intergenic | 50.0% | |
| CGTGGAGATATGTTTGTGGG+TGG | - | 57390:10312-10331 | None:intergenic | 50.0% | |
| GAGATATGTTTGTGGGTGGG+AGG | - | 57390:10308-10327 | None:intergenic | 50.0% | |
| GGAAAAGGGTAGGGTGCATA+AGG | + | 57390:11048-11067 | MS.gene57336:CDS | 50.0% | |
| GGAGCGTGGAGATATGTTTG+TGG | - | 57390:10316-10335 | None:intergenic | 50.0% | |
| GGTGAGAGAGGTGAAGGATA+AGG | + | 57390:11006-11025 | MS.gene57336:CDS | 50.0% | |
| TCTGTTTACCCTTCAACCGG+TGG | + | 57390:10494-10513 | MS.gene57336:CDS | 50.0% | |
| ! | CTTTGGTGACACTGGTTGAG+GGG | + | 57390:10729-10748 | MS.gene57336:CDS | 50.0% |
| ! | GATTCCCTTTGGTTTCCCTC+TGG | + | 57390:11133-11152 | MS.gene57336:CDS | 50.0% |
| ! | GGTTGGAGGAGTGTAAAGAG+AGG | + | 57390:10942-10961 | MS.gene57336:CDS | 50.0% |
| AGGAGTGAAGGAGTCATGCG+TGG | - | 57390:10288-10307 | None:intergenic | 55.0% | |
| AGTGAAGGAGTCATGCGTGG+TGG | - | 57390:10285-10304 | None:intergenic | 55.0% | |
| GAGAGACTTGAGAGCAACGG+CGG | - | 57390:10420-10439 | None:intergenic | 55.0% | |
| GGAGTCACAGCAAGGGTTGT+GGG | + | 57390:10979-10998 | MS.gene57336:CDS | 55.0% | |
| TGGAGTCACAGCAAGGGTTG+TGG | + | 57390:10978-10997 | MS.gene57336:CDS | 55.0% | |
| TTTGTGGGTGGGAGGAGTGA+AGG | - | 57390:10300-10319 | None:intergenic | 55.0% | |
| ! | ATGCGTGGTGGCGCGTAAAA+GGG | - | 57390:10273-10292 | None:intergenic | 55.0% |
| ! | CCCTTTGGTTTCCCTCTGGA+AGG | + | 57390:11137-11156 | MS.gene57336:CDS | 55.0% |
| ! | GGAGGAGTGTAAAGAGAGGG+TGG | + | 57390:10946-10965 | MS.gene57336:CDS | 55.0% |
| !! | GGATTCGGTGAGAGAGGTGA+AGG | + | 57390:11000-11019 | MS.gene57336:CDS | 55.0% |
| !! | GTTGTGGGATTCGGTGAGAG+AGG | + | 57390:10994-11013 | MS.gene57336:CDS | 55.0% |
| GCGTAAAAGGGAGAGGGTGG+TGG | - | 57390:10261-10280 | None:intergenic | 60.0% | |
| GGTGGCGCGTAAAAGGGAGA+GGG | - | 57390:10267-10286 | None:intergenic | 60.0% | |
| ! | CATGCGTGGTGGCGCGTAAA+AGG | - | 57390:10274-10293 | None:intergenic | 60.0% |
| ! | TGGTGGCGCGTAAAAGGGAG+AGG | - | 57390:10268-10287 | None:intergenic | 60.0% |
| ACGCTCCTCTCCTCCACCGA+CGG | + | 57390:10329-10348 | MS.gene57336:CDS | 65.0% | |
| AGCGGTTGCGCGTGAACCGT+CGG | - | 57390:10348-10367 | None:intergenic | 65.0% | |
| GAGAGCAACGGCGGCGTTGT+TGG | - | 57390:10411-10430 | None:intergenic | 65.0% | |
| GGCGCGTAAAAGGGAGAGGG+TGG | - | 57390:10264-10283 | None:intergenic | 65.0% | |
| GTGAACCGTCGGTGGAGGAG+AGG | - | 57390:10337-10356 | None:intergenic | 65.0% | |
| GGTTGCGCGTGAACCGTCGG+TGG | - | 57390:10345-10364 | None:intergenic | 70.0% | |
| GTCGGTGGAGGAGAGGAGCG+TGG | - | 57390:10330-10349 | None:intergenic | 70.0% | |
| TGCGCGTGAACCGTCGGTGG+AGG | - | 57390:10342-10361 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57390 | gene | 10176 | 11168 | 10176 | ID=MS.gene57336 |
| 57390 | mRNA | 10176 | 11168 | 10176 | ID=MS.gene57336.t1;Parent=MS.gene57336 |
| 57390 | exon | 10176 | 11168 | 10176 | ID=MS.gene57336.t1.exon1;Parent=MS.gene57336.t1 |
| 57390 | CDS | 10176 | 11168 | 10176 | ID=cds.MS.gene57336.t1;Parent=MS.gene57336.t1 |
| Gene Sequence |
| Protein sequence |
