Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene58608 | -0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene58608 | -0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene58608 | -0.812956 | 3.27E-51 | -1.69E-46 |
| MS.gene050156 | MS.gene58608 | -0.815475 | 9.07E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene58608 | -0.822937 | 1.81E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene58608 | -0.816328 | 5.85E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene58608 | -0.82277 | 1.98E-53 | -1.69E-46 |
| MS.gene050962 | MS.gene58608 | -0.810792 | 9.67E-51 | -1.69E-46 |
| MS.gene051147 | MS.gene58608 | -0.8297 | 4.45E-55 | -1.69E-46 |
| MS.gene051190 | MS.gene58608 | -0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene58608 | -0.813365 | 2.66E-51 | -1.69E-46 |
| MS.gene051594 | MS.gene58608 | -0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene58608 | -0.833109 | 6.44E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene58608 | -0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene051957 | MS.gene58608 | -0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene58608 | -0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene58608 | -0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene58608 | -0.806183 | 9.31E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene58608 | -0.825954 | 3.54E-54 | -1.69E-46 |
| MS.gene052896 | MS.gene58608 | -0.807643 | 4.57E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene58608 | -0.807895 | 4.04E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene58608 | -0.801 | 1.11E-48 | -1.69E-46 |
| MS.gene053226 | MS.gene58608 | -0.803282 | 3.76E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene58608 | -0.829853 | 4.08E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene58608 | -0.808953 | 2.40E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene58608 | -0.833192 | 6.14E-56 | -1.69E-46 |
| MS.gene05423 | MS.gene58608 | -0.802824 | 4.67E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene58608 | 0.8477 | 9.80E-60 | -1.69E-46 |
| MS.gene054467 | MS.gene58608 | -0.842845 | 2.02E-58 | -1.69E-46 |
| MS.gene054468 | MS.gene58608 | -0.807554 | 4.78E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene58608 | -0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene054775 | MS.gene58608 | -0.815511 | 8.90E-52 | -1.69E-46 |
| MS.gene054801 | MS.gene58608 | -0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene58608 | -0.810816 | 9.55E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene58608 | -0.812391 | 4.34E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene58608 | -0.839496 | 1.53E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene58608 | -0.814862 | 1.24E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene58608 | -0.826516 | 2.60E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene58608 | -0.842254 | 2.89E-58 | -1.69E-46 |
| MS.gene055926 | MS.gene58608 | -0.828998 | 6.58E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene58608 | -0.812306 | 4.53E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene58608 | -0.838001 | 3.73E-57 | -1.69E-46 |
| MS.gene056498 | MS.gene58608 | -0.800172 | 1.63E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene58608 | -0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene057736 | MS.gene58608 | -0.822625 | 2.14E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene58608 | -0.833485 | 5.19E-56 | -1.69E-46 |
| MS.gene058625 | MS.gene58608 | -0.854602 | 1.10E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene58608 | -0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene58608 | -0.814311 | 1.64E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene58608 | -0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene060122 | MS.gene58608 | 0.820899 | 5.37E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene58608 | 0.832609 | 8.57E-56 | -1.69E-46 |
| MS.gene060167 | MS.gene58608 | -0.834216 | 3.41E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene58608 | -0.836672 | 8.16E-57 | -1.69E-46 |
| MS.gene06052 | MS.gene58608 | -0.819498 | 1.13E-52 | -1.69E-46 |
| MS.gene060634 | MS.gene58608 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene58608 | -0.820986 | 5.13E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene58608 | -0.832703 | 8.13E-56 | -1.69E-46 |
| MS.gene060689 | MS.gene58608 | -0.808515 | 2.98E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene58608 | -0.828146 | 1.06E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene58608 | -0.856207 | 3.76E-62 | -1.69E-46 |
| MS.gene061040 | MS.gene58608 | 0.818035 | 2.42E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTTTGTCTAAATATTC+AGG | 0.203271 | 5.3:+24449901 | MS.gene58608:CDS |
| CTCGAGGTCGTCGGGGATTG+GGG | 0.228861 | 5.3:-24449358 | None:intergenic |
| ACTCGAGGTCGTCGGGGATT+GGG | 0.272803 | 5.3:-24449359 | None:intergenic |
| AATTAAGGTCTCTGAAAGTT+TGG | 0.284932 | 5.3:-24449881 | None:intergenic |
| GTCGTCGTAGCGTGCGTTCA+TGG | 0.308557 | 5.3:+24449707 | MS.gene58608:intron |
| AGTAGAGATATGGGATTTCT+TGG | 0.308881 | 5.3:+24449327 | None:intergenic |
| CTTTGTATGCATTGCATTGT+CGG | 0.310634 | 5.3:-24450571 | None:intergenic |
| ATATTTAGACAAAGTAATTA+AGG | 0.354347 | 5.3:-24449896 | None:intergenic |
| ATCGCTCTCGCCTTCTGCTT+TGG | 0.354959 | 5.3:+24449423 | MS.gene58608:CDS |
| AACTCGAGGTCGTCGGGGAT+TGG | 0.372428 | 5.3:-24449360 | None:intergenic |
| ATTCTTAATGCTGCACATAA+TGG | 0.381497 | 5.3:+24449732 | MS.gene58608:CDS |
| GGAGATAACTCGAGGTCGTC+GGG | 0.416866 | 5.3:-24449366 | None:intergenic |
| ATTAAGGTCTCTGAAAGTTT+GGG | 0.424180 | 5.3:-24449880 | None:intergenic |
| TCGAGGTCGTCGGGGATTGG+GGG | 0.444858 | 5.3:-24449357 | None:intergenic |
| ATGGCACTACCGATCCTTCT+CGG | 0.445701 | 5.3:+24449751 | MS.gene58608:CDS |
| AACCTACACCGGCTTTAAAC+CGG | 0.447734 | 5.3:+24450059 | MS.gene58608:CDS |
| TTACTTTGTCTAAATATTCA+GGG | 0.448785 | 5.3:+24449902 | MS.gene58608:CDS |
| ACATTATTTGTTACCCGAGA+AGG | 0.497121 | 5.3:-24449765 | None:intergenic |
| TGGCACTACCGATCCTTCTC+GGG | 0.498527 | 5.3:+24449752 | MS.gene58608:CDS |
| AAGCAGAAGGCGAGAGCGAT+CGG | 0.498878 | 5.3:-24449420 | None:intergenic |
| CTCGCCTTCTGCTTTGGTGT+AGG | 0.509998 | 5.3:+24449429 | MS.gene58608:CDS |
| CAATGCAATGCATACAAAGA+AGG | 0.516235 | 5.3:+24450575 | MS.gene58608:CDS |
| CTTGACTTCTTTGTACCATA+CGG | 0.516923 | 5.3:-24449557 | None:intergenic |
| TAGGTCATGTTACCTCCGTA+TGG | 0.521416 | 5.3:+24449542 | MS.gene58608:intron |
| CGAGGTCGTCGGGGATTGGG+GGG | 0.522647 | 5.3:-24449356 | None:intergenic |
| CTGATGAAGCGAATTTGAGC+GGG | 0.536765 | 5.3:-24449387 | None:intergenic |
| GGGAGATAACTCGAGGTCGT+CGG | 0.564364 | 5.3:-24449367 | None:intergenic |
| AAAGCTGACCGGTTTAAAGC+CGG | 0.568877 | 5.3:-24450067 | None:intergenic |
| GACTCGGACTCGAGATCTCA+AGG | 0.575497 | 5.3:+24449924 | MS.gene58608:CDS |
| AATGCAATGCATACAAAGAA+GGG | 0.578153 | 5.3:+24450576 | MS.gene58608:CDS |
| GGTGTAGGTTTCTCGAATGT+AGG | 0.579764 | 5.3:-24450046 | None:intergenic |
| ATTTGTTACCCGAGAAGGAT+CGG | 0.588538 | 5.3:-24449760 | None:intergenic |
| CCTTAAAATCGTAAACGACA+TGG | 0.601425 | 5.3:-24449585 | None:intergenic |
| GACCGGTTTAAAGCCGGTGT+AGG | 0.604444 | 5.3:-24450061 | None:intergenic |
| ACATCCTACACCAAAGCAGA+AGG | 0.604708 | 5.3:-24449433 | None:intergenic |
| AAAGAGAGAATAAAGCTGAC+CGG | 0.607632 | 5.3:-24450078 | None:intergenic |
| GACTTCTTTGTACCATACGG+AGG | 0.618984 | 5.3:-24449554 | None:intergenic |
| TGTCTAAATATTCAGGGACT+CGG | 0.623538 | 5.3:+24449908 | MS.gene58608:CDS |
| TCTGATGAAGCGAATTTGAG+CGG | 0.624893 | 5.3:-24449388 | None:intergenic |
| TACATTCGAGAAACCTACAC+CGG | 0.663662 | 5.3:+24450048 | MS.gene58608:CDS |
| GAGATAACTCGAGGTCGTCG+GGG | 0.698069 | 5.3:-24449365 | None:intergenic |
| TTTGAGCGGGAGATAACTCG+AGG | 0.703118 | 5.3:-24449374 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAGACAAAGTAATTA+AGG | - | chr5.3:24449899-24449918 | None:intergenic | 15.0% |
| !! | ATTCAAATTACTAACTAATT+AGG | - | chr5.3:24449966-24449985 | None:intergenic | 15.0% |
| !! | AGATATTGTGTTAGAAAATA+TGG | - | chr5.3:24450543-24450562 | None:intergenic | 20.0% |
| !! | ATTACTTTGTCTAAATATTC+AGG | + | chr5.3:24449901-24449920 | MS.gene58608:CDS | 20.0% |
| !! | TGTTTGTTTGTTTGTATATT+TGG | + | chr5.3:24449685-24449704 | MS.gene58608:intron | 20.0% |
| !! | TTACTTTGTCTAAATATTCA+GGG | + | chr5.3:24449902-24449921 | MS.gene58608:CDS | 20.0% |
| !!! | AATATCAATTGATGATACAA+AGG | - | chr5.3:24449815-24449834 | None:intergenic | 20.0% |
| !!! | ATATCAATTGATGATACAAA+GGG | - | chr5.3:24449814-24449833 | None:intergenic | 20.0% |
| !!! | ATCATGCAATAGAATTTTTT+AGG | + | chr5.3:24450429-24450448 | MS.gene58608:intron | 20.0% |
| !!! | TCAAATTGAAGTTTTAAATC+TGG | - | chr5.3:24450481-24450500 | None:intergenic | 20.0% |
| ! | GAAAAAGAATGAAAATGGAT+TGG | - | chr5.3:24449637-24449656 | None:intergenic | 25.0% |
| ! | GATAAATTACAATAGAACGA+TGG | + | chr5.3:24450250-24450269 | MS.gene58608:intron | 25.0% |
| ! | TACTAAATAACATACTGCTA+GGG | + | chr5.3:24450277-24450296 | MS.gene58608:intron | 25.0% |
| ! | TAGAGGAAAAAGAATGAAAA+TGG | - | chr5.3:24449642-24449661 | None:intergenic | 25.0% |
| ! | TCGTTCTATTGTAATTTATC+AGG | - | chr5.3:24450250-24450269 | None:intergenic | 25.0% |
| !! | ATTTGAATCTTTTCCTCTAT+CGG | + | chr5.3:24450495-24450514 | MS.gene58608:intron | 25.0% |
| !! | TATCAATTGATGATACAAAG+GGG | - | chr5.3:24449813-24449832 | None:intergenic | 25.0% |
| !!! | GGTTTAATTGTTTCTCTTTT+CGG | + | chr5.3:24450298-24450317 | MS.gene58608:intron | 25.0% |
| !!! | TGAAGTTTTAAATCTGGATA+GGG | - | chr5.3:24450475-24450494 | None:intergenic | 25.0% |
| !!! | TTGAAGTTTTAAATCTGGAT+AGG | - | chr5.3:24450476-24450495 | None:intergenic | 25.0% |
| AAATCCTCCATAAAACACTA+TGG | + | chr5.3:24450151-24450170 | MS.gene58608:intron | 30.0% | |
| AACATGACCTAAAAGGAAAA+AGG | - | chr5.3:24449533-24449552 | None:intergenic | 30.0% | |
| AATGCAATGCATACAAAGAA+GGG | + | chr5.3:24450576-24450595 | MS.gene58608:CDS | 30.0% | |
| ATTCTTAATGCTGCACATAA+TGG | + | chr5.3:24449732-24449751 | MS.gene58608:CDS | 30.0% | |
| CACTCGCAAAAGAAAATAAT+TGG | + | chr5.3:24450185-24450204 | MS.gene58608:intron | 30.0% | |
| GTACTAAATAACATACTGCT+AGG | + | chr5.3:24450276-24450295 | MS.gene58608:intron | 30.0% | |
| GTTAGTTAGTTAGTTAGTAG+AGG | - | chr5.3:24449659-24449678 | None:intergenic | 30.0% | |
| ! | AATTAAGGTCTCTGAAAGTT+TGG | - | chr5.3:24449884-24449903 | None:intergenic | 30.0% |
| ! | ATTAAGGTCTCTGAAAGTTT+GGG | - | chr5.3:24449883-24449902 | None:intergenic | 30.0% |
| ! | TAGTGTTTTATGGAGGATTT+TGG | - | chr5.3:24450151-24450170 | None:intergenic | 30.0% |
| ! | TCTCATTCCTTTTTCCTTTT+AGG | + | chr5.3:24449523-24449542 | MS.gene58608:intron | 30.0% |
| ! | TTTGAATCTTTTCCTCTATC+GGG | + | chr5.3:24450496-24450515 | MS.gene58608:intron | 30.0% |
| !! | ATTTTGGCAGTTTTATACCA+TGG | - | chr5.3:24450135-24450154 | None:intergenic | 30.0% |
| !!! | GAAGTTTTAAATCTGGATAG+GGG | - | chr5.3:24450474-24450493 | None:intergenic | 30.0% |
| AAAGAGAGAATAAAGCTGAC+CGG | - | chr5.3:24450081-24450100 | None:intergenic | 35.0% | |
| ATTTATACAGATCCCGATAG+AGG | - | chr5.3:24450511-24450530 | None:intergenic | 35.0% | |
| CAATGCAATGCATACAAAGA+AGG | + | chr5.3:24450575-24450594 | MS.gene58608:CDS | 35.0% | |
| CCTTAAAATCGTAAACGACA+TGG | - | chr5.3:24449588-24449607 | None:intergenic | 35.0% | |
| CGGGATCTGTATAAATTCTA+GGG | + | chr5.3:24450515-24450534 | MS.gene58608:intron | 35.0% | |
| CGTGTTAAGAGAATCAACAA+GGG | - | chr5.3:24450327-24450346 | None:intergenic | 35.0% | |
| CTTGACTTCTTTGTACCATA+CGG | - | chr5.3:24449560-24449579 | None:intergenic | 35.0% | |
| CTTTGTATGCATTGCATTGT+CGG | - | chr5.3:24450574-24450593 | None:intergenic | 35.0% | |
| TCGGGATCTGTATAAATTCT+AGG | + | chr5.3:24450514-24450533 | MS.gene58608:intron | 35.0% | |
| TGTCTAAATATTCAGGGACT+CGG | + | chr5.3:24449908-24449927 | MS.gene58608:CDS | 35.0% | |
| ! | ACATTATTTGTTACCCGAGA+AGG | - | chr5.3:24449768-24449787 | None:intergenic | 35.0% |
| ! | ATTTTCTTTTGCGAGTGTGA+AGG | - | chr5.3:24450182-24450201 | None:intergenic | 35.0% |
| ! | TTTTCTTTTGCGAGTGTGAA+GGG | - | chr5.3:24450181-24450200 | None:intergenic | 35.0% |
| !! | AATGCCTTTAAAACCCTGTA+GGG | - | chr5.3:24450019-24450038 | None:intergenic | 35.0% |
| !! | CCATGTCGTTTACGATTTTA+AGG | + | chr5.3:24449585-24449604 | MS.gene58608:CDS | 35.0% |
| !! | CCTTGTTGATTCTCTTAACA+CGG | + | chr5.3:24450325-24450344 | MS.gene58608:intron | 35.0% |
| CCGTGTTAAGAGAATCAACA+AGG | - | chr5.3:24450328-24450347 | None:intergenic | 40.0% | |
| TACATTCGAGAAACCTACAC+CGG | + | chr5.3:24450048-24450067 | MS.gene58608:CDS | 40.0% | |
| TCTGATGAAGCGAATTTGAG+CGG | - | chr5.3:24449391-24449410 | None:intergenic | 40.0% | |
| TTATCGATCGATCGTTACCA+TGG | + | chr5.3:24450115-24450134 | MS.gene58608:intron | 40.0% | |
| ! | ATTTGTTACCCGAGAAGGAT+CGG | - | chr5.3:24449763-24449782 | None:intergenic | 40.0% |
| ! | TTTCTTTTGCGAGTGTGAAG+GGG | - | chr5.3:24450180-24450199 | None:intergenic | 40.0% |
| !! | ATGCCTTTAAAACCCTGTAG+GGG | - | chr5.3:24450018-24450037 | None:intergenic | 40.0% |
| !! | CAATGCCTTTAAAACCCTGT+AGG | - | chr5.3:24450020-24450039 | None:intergenic | 40.0% |
| !!! | CTACAGGGTTTTAAAGGCAT+TGG | + | chr5.3:24450018-24450037 | MS.gene58608:intron | 40.0% |
| ACATCCTACACCAAAGCAGA+AGG | - | chr5.3:24449436-24449455 | None:intergenic | 45.0% | |
| CGGAGGTAACATGACCTAAA+AGG | - | chr5.3:24449540-24449559 | None:intergenic | 45.0% | |
| CTGATGAAGCGAATTTGAGC+GGG | - | chr5.3:24449390-24449409 | None:intergenic | 45.0% | |
| GACTTCTTTGTACCATACGG+AGG | - | chr5.3:24449557-24449576 | None:intergenic | 45.0% | |
| GGTGTAGGTTTCTCGAATGT+AGG | - | chr5.3:24450049-24450068 | None:intergenic | 45.0% | |
| TAGGTCATGTTACCTCCGTA+TGG | + | chr5.3:24449542-24449561 | MS.gene58608:intron | 45.0% | |
| ! | AAAGCTGACCGGTTTAAAGC+CGG | - | chr5.3:24450070-24450089 | None:intergenic | 45.0% |
| ! | TTCTTTTGCGAGTGTGAAGG+GGG | - | chr5.3:24450179-24450198 | None:intergenic | 45.0% |
| !! | AACCTACACCGGCTTTAAAC+CGG | + | chr5.3:24450059-24450078 | MS.gene58608:CDS | 45.0% |
| !! | TGCCTTTAAAACCCTGTAGG+GGG | - | chr5.3:24450017-24450036 | None:intergenic | 45.0% |
| ATGGCACTACCGATCCTTCT+CGG | + | chr5.3:24449751-24449770 | MS.gene58608:CDS | 50.0% | |
| TTTGAGCGGGAGATAACTCG+AGG | - | chr5.3:24449377-24449396 | None:intergenic | 50.0% | |
| ! | ACTGTTTTCACCCCCCTACA+GGG | + | chr5.3:24450003-24450022 | MS.gene58608:intron | 50.0% |
| ! | GGCGCCATAGTGTTTTATGG+AGG | - | chr5.3:24450158-24450177 | None:intergenic | 50.0% |
| ! | TACTGTTTTCACCCCCCTAC+AGG | + | chr5.3:24450002-24450021 | MS.gene58608:intron | 50.0% |
| !! | ACCCCCCTACAGGGTTTTAA+AGG | + | chr5.3:24450012-24450031 | MS.gene58608:intron | 50.0% |
| !! | GCCTTTAAAACCCTGTAGGG+GGG | - | chr5.3:24450016-24450035 | None:intergenic | 50.0% |
| AAGCAGAAGGCGAGAGCGAT+CGG | - | chr5.3:24449423-24449442 | None:intergenic | 55.0% | |
| ATCGCTCTCGCCTTCTGCTT+TGG | + | chr5.3:24449423-24449442 | MS.gene58608:CDS | 55.0% | |
| GACTCGGACTCGAGATCTCA+AGG | + | chr5.3:24449924-24449943 | MS.gene58608:CDS | 55.0% | |
| GAGATAACTCGAGGTCGTCG+GGG | - | chr5.3:24449368-24449387 | None:intergenic | 55.0% | |
| GGAGATAACTCGAGGTCGTC+GGG | - | chr5.3:24449369-24449388 | None:intergenic | 55.0% | |
| GGGAGATAACTCGAGGTCGT+CGG | - | chr5.3:24449370-24449389 | None:intergenic | 55.0% | |
| TGGCACTACCGATCCTTCTC+GGG | + | chr5.3:24449752-24449771 | MS.gene58608:CDS | 55.0% | |
| ! | CTCGCCTTCTGCTTTGGTGT+AGG | + | chr5.3:24449429-24449448 | MS.gene58608:CDS | 55.0% |
| ! | GACCGGTTTAAAGCCGGTGT+AGG | - | chr5.3:24450064-24450083 | None:intergenic | 55.0% |
| !!! | GGGGGCGCCATAGTGTTTTA+TGG | - | chr5.3:24450161-24450180 | None:intergenic | 55.0% |
| AACTCGAGGTCGTCGGGGAT+TGG | - | chr5.3:24449363-24449382 | None:intergenic | 60.0% | |
| ACTCGAGGTCGTCGGGGATT+GGG | - | chr5.3:24449362-24449381 | None:intergenic | 60.0% | |
| GTCGTCGTAGCGTGCGTTCA+TGG | + | chr5.3:24449707-24449726 | MS.gene58608:intron | 60.0% | |
| CTCGAGGTCGTCGGGGATTG+GGG | - | chr5.3:24449361-24449380 | None:intergenic | 65.0% | |
| TCGAGGTCGTCGGGGATTGG+GGG | - | chr5.3:24449360-24449379 | None:intergenic | 65.0% | |
| CGAGGTCGTCGGGGATTGGG+GGG | - | chr5.3:24449359-24449378 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 24449336 | 24450605 | 24449336 | ID=MS.gene58608 |
| chr5.3 | mRNA | 24449336 | 24450605 | 24449336 | ID=MS.gene58608.t1;Parent=MS.gene58608 |
| chr5.3 | exon | 24449336 | 24449453 | 24449336 | ID=MS.gene58608.t1.exon1;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24449336 | 24449453 | 24449336 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| chr5.3 | exon | 24449545 | 24449606 | 24449545 | ID=MS.gene58608.t1.exon2;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24449545 | 24449606 | 24449545 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| chr5.3 | exon | 24449717 | 24449773 | 24449717 | ID=MS.gene58608.t1.exon3;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24449717 | 24449773 | 24449717 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| chr5.3 | exon | 24449871 | 24449945 | 24449871 | ID=MS.gene58608.t1.exon4;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24449871 | 24449945 | 24449871 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| chr5.3 | exon | 24450024 | 24450107 | 24450024 | ID=MS.gene58608.t1.exon5;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24450024 | 24450107 | 24450024 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| chr5.3 | exon | 24450570 | 24450605 | 24450570 | ID=MS.gene58608.t1.exon6;Parent=MS.gene58608.t1 |
| chr5.3 | CDS | 24450570 | 24450605 | 24450570 | ID=cds.MS.gene58608.t1;Parent=MS.gene58608.t1 |
| Gene Sequence |
| Protein sequence |
