AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61684

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61684.t1 MTR_1g012020 94.731 873 39 4 1 872 1 867 0.0 1634
MS.gene61684.t1 MTR_5g006530 29.009 686 374 23 37 666 21 649 6.77e-61 221
MS.gene61684.t1 MTR_5g006530 48.404 188 94 3 480 666 240 425 1.94e-50 187
MS.gene61684.t1 MTR_1g080640 62.500 96 34 1 429 524 5 98 2.72e-30 115
MS.gene61684.t1 MTR_8g095100 61.458 96 35 1 429 524 5 98 4.33e-30 115
MS.gene61684.t1 MTR_8g103320 41.040 173 90 6 476 642 52 218 2.05e-29 123
MS.gene61684.t1 MTR_1g101580 60.417 96 36 1 429 524 5 98 4.50e-29 112
MS.gene61684.t1 MTR_1g073270 60.417 96 36 1 429 524 5 98 5.36e-29 111
MS.gene61684.t1 MTR_2g049090 56.481 108 35 2 429 524 5 112 6.03e-29 112
MS.gene61684.t1 MTR_6g087590 47.727 132 60 3 503 631 128 253 1.39e-28 122
MS.gene61684.t1 MTR_3g110122 38.172 186 106 5 446 628 90 269 2.41e-28 121
MS.gene61684.t1 MTR_6g071120 49.612 129 39 2 396 524 1 103 5.48e-28 108
MS.gene61684.t1 MTR_1g027430 82.258 62 11 0 429 490 5 66 1.69e-27 107
MS.gene61684.t1 MTR_1g012000 90.909 55 5 0 38 92 9 63 2.43e-27 106
MS.gene61684.t1 MTR_4g076830 64.286 84 22 1 429 504 5 88 1.53e-26 104
MS.gene61684.t1 MTR_7g022680 80.645 62 12 0 429 490 5 66 1.83e-26 103
MS.gene61684.t1 MTR_0181s0060 55.670 97 31 2 436 520 35 131 1.11e-23 98.2
MS.gene61684.t1 MTR_4g010860 67.089 79 23 1 429 504 6 84 2.17e-23 95.5
MS.gene61684.t1 MTR_1g103230 41.322 121 69 1 511 631 446 564 5.93e-23 105
MS.gene61684.t1 MTR_5g011530 58.750 80 25 1 433 504 43 122 5.91e-20 87.0
MS.gene61684.t1 MTR_8g015660 75.806 62 13 1 429 490 9 68 1.23e-19 94.0
MS.gene61684.t1 MTR_2g036100 47.170 106 22 2 429 524 5 86 3.63e-18 80.5
MS.gene61684.t1 MTR_1g011990 68.116 69 9 2 264 323 46 110 1.39e-17 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61684.t1 AT3G22780 33.515 549 241 23 317 850 254 693 1.02e-61 222
MS.gene61684.t1 AT3G22760 39.812 319 139 10 325 643 77 342 1.71e-52 191
MS.gene61684.t1 AT3G22760 39.812 319 139 10 325 643 200 465 9.24e-52 192
MS.gene61684.t1 AT4G14770 38.636 308 138 8 324 631 245 501 3.53e-50 188
MS.gene61684.t1 AT4G14770 27.300 337 181 12 570 850 344 672 4.62e-15 80.1
MS.gene61684.t1 AT4G14770 38.636 308 138 8 324 631 226 482 3.67e-50 188
MS.gene61684.t1 AT4G14770 27.300 337 181 12 570 850 325 653 4.42e-15 80.1
MS.gene61684.t1 AT4G14770 38.636 308 138 8 324 631 225 481 3.72e-50 188
MS.gene61684.t1 AT4G14770 27.300 337 181 12 570 850 324 652 4.56e-15 80.1
MS.gene61684.t1 AT3G04850 32.857 350 167 10 303 628 271 576 4.08e-45 173
MS.gene61684.t1 AT5G25790 43.750 160 77 7 485 640 74 224 2.21e-30 125
MS.gene61684.t1 AT5G25790 40.437 183 90 7 464 640 59 228 3.40e-30 125
MS.gene61684.t1 AT5G25790 40.437 183 90 7 464 640 59 228 3.71e-30 126
MS.gene61684.t1 AT2G20110 46.099 141 67 4 503 639 119 254 5.44e-30 126
MS.gene61684.t1 AT2G20110 46.099 141 67 4 503 639 119 254 6.03e-30 126
MS.gene61684.t1 AT2G20110 46.099 141 67 4 503 639 119 254 1.08e-29 125
MS.gene61684.t1 AT4G29000 44.366 142 68 5 503 639 132 267 5.20e-28 120
MS.gene61684.t1 AT3G16160 46.774 124 60 3 503 626 66 183 9.26e-25 107

Find 209 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGTAGATTGTTCCATTTC+TGG 0.116107 1.3:-9165376 None:intergenic
CGTAGACGCTGCCTACAATT+TGG 0.186201 1.3:+9166807 MS.gene61684:CDS
TGCGATATTCGCCAGTTATC+TGG 0.216204 1.3:+9169333 MS.gene61684:CDS
GAAGCCTTGACAGGCTTTAT+TGG 0.243588 1.3:-9164925 None:intergenic
AGCATCTGTCGATGAATATT+TGG 0.259084 1.3:+9165318 MS.gene61684:CDS
ATGTTTCTGTATCTGATAAA+TGG 0.260838 1.3:-9165141 None:intergenic
GTGGAGGAGAAACTCTCTTT+TGG 0.268257 1.3:-9169515 None:intergenic
TTCTCCCCTTCAATTGTTGC+AGG 0.272545 1.3:-9165550 None:intergenic
TGGTAACAGAGTAGAATTTC+AGG 0.294634 1.3:+9167588 MS.gene61684:CDS
ATGCAAACTTATAGAAGATT+TGG 0.296279 1.3:-9167027 None:intergenic
GAAGCTGCTTCCGTTGTTCT+TGG 0.299878 1.3:+9166831 MS.gene61684:CDS
CATTGCAACAATGGTGTTAC+AGG 0.307892 1.3:-9169004 None:intergenic
TTCTTAATCTGAGAAGCTTC+TGG 0.309298 1.3:-9163832 None:intergenic
GTAGACGCTGCCTACAATTT+GGG 0.311899 1.3:+9166808 MS.gene61684:CDS
CTCTTATCAGGTGCATTTGC+CGG 0.312680 1.3:-9167206 None:intergenic
TTCTATAAGTTTGCATATAG+TGG 0.322912 1.3:+9167034 MS.gene61684:CDS
CAGTAGATTGTTCCATTTCT+GGG 0.324248 1.3:-9165375 None:intergenic
CATGCGACACATGGGTTTCT+CGG 0.326256 1.3:+9164949 MS.gene61684:CDS
TTTGTTGGAGGAATCTAATA+TGG 0.332408 1.3:+9165495 MS.gene61684:CDS
ATGCTGGAGGACTGCAGCTT+TGG 0.334347 1.3:-9165300 None:intergenic
ATCCTCAACTCCGTCCAATA+TGG 0.338930 1.3:+9167070 MS.gene61684:CDS
TGATGTTCCACTGAATAATA+TGG 0.341118 1.3:+9167690 MS.gene61684:CDS
TTGCAATGGCAATGAGGATT+CGG 0.342240 1.3:+9169659 MS.gene61684:CDS
CTGGCGAATATCGCATCTAT+TGG 0.356346 1.3:-9169325 None:intergenic
GGGCGTACCCTCCTCTTATC+AGG 0.364892 1.3:-9167218 None:intergenic
TGCAGTTACTGTGATTGTTT+TGG 0.366597 1.3:+9167523 MS.gene61684:intron
AAGTTATATTAAAATTTGAT+AGG 0.367397 1.3:+9165434 MS.gene61684:CDS
AGCAAATGCTTGTGGATTAC+GGG 0.369212 1.3:-9167644 None:intergenic
AGTGTTGACAAATCTCAAAA+AGG 0.377839 1.3:-9164896 None:intergenic
AAAAGATTGATCATCCATAT+TGG 0.378531 1.3:-9167084 None:intergenic
TGCTGGAGGACTGCAGCTTT+GGG 0.380011 1.3:-9165299 None:intergenic
AGCTGCACATGGTACAATCT+TGG 0.387960 1.3:-9167668 None:intergenic
ATTTGCTTTCACAGACTTGA+TGG 0.391070 1.3:-9169484 None:intergenic
GAGCAAATGCTTGTGGATTA+CGG 0.393901 1.3:-9167645 None:intergenic
GTTTATAACAGTTGCTCAAA+AGG 0.394683 1.3:+9165249 MS.gene61684:CDS
CTACTGAAGCATCAGTTTCA+TGG 0.398320 1.3:-9167127 None:intergenic
TGCAATGGCAATGAGGATTC+GGG 0.411133 1.3:+9169660 MS.gene61684:CDS
AAGTTAGCGCTTGGGGTAAT+CGG 0.415030 1.3:-9169384 None:intergenic
GACAGAAAATTGTGACAATC+AGG 0.415519 1.3:+9168948 MS.gene61684:CDS
CAACCCAATGCCTGGTGGCT+TGG 0.420396 1.3:-9166922 None:intergenic
GAGATTATCAGATGGTATAC+AGG 0.422125 1.3:+9167001 MS.gene61684:CDS
AGTTCTTCTGCTATGTTACT+AGG 0.425346 1.3:-9165466 None:intergenic
CATCATCTAAGTTAGCGCTT+GGG 0.426755 1.3:-9169392 None:intergenic
TGTTCCATTTCTGGGTTGAC+TGG 0.428222 1.3:-9165367 None:intergenic
GCGATATTCGCCAGTTATCT+GGG 0.432464 1.3:+9169334 MS.gene61684:CDS
TGATCCTATCCAGGCTGTTA+AGG 0.432469 1.3:+9165860 MS.gene61684:CDS
CCTAGTTGTGCTTCAACTAC+TGG 0.434056 1.3:+9166975 MS.gene61684:CDS
GAAAATCCTGCAACAATTGA+AGG 0.434474 1.3:+9165544 MS.gene61684:CDS
ACTTTGCACCCTGCTTGCCT+TGG 0.435412 1.3:-9169152 None:intergenic
AATGATGTATACTTGAACTT+GGG 0.435796 1.3:-9163929 None:intergenic
CGGATTGGATCAAGCTCCTC+AGG 0.435804 1.3:+9169552 MS.gene61684:CDS
GCTAACGTTGGATGCTCGAC+TGG 0.440058 1.3:+9167984 MS.gene61684:CDS
GTATCCAGTCAACCCAGAAA+TGG 0.441055 1.3:+9165363 MS.gene61684:CDS
TGTTTCTGTATCTGATAAAT+GGG 0.441713 1.3:-9165140 None:intergenic
GAAGCTTCCTTCAATACATC+AGG 0.449228 1.3:-9169456 None:intergenic
CGAGTATTGTGTTTCACGGT+GGG 0.450483 1.3:-9165019 None:intergenic
GATGGATGTATGAATGTCTT+TGG 0.451729 1.3:+9168017 MS.gene61684:CDS
TGAAACACCTGATGTATTGA+AGG 0.458665 1.3:+9169449 MS.gene61684:CDS
TTCTTACAGTTGCACGTCTT+AGG 0.458861 1.3:-9167405 None:intergenic
TTTGTATGTATCAGGCTTGA+AGG 0.461411 1.3:+9165115 MS.gene61684:intron
TCATCATCTAAGTTAGCGCT+TGG 0.462532 1.3:-9169393 None:intergenic
TTTCCAAGCCACCAGGCATT+GGG 0.462604 1.3:+9166919 MS.gene61684:CDS
GTTTCCAAGCCACCAGGCAT+TGG 0.462633 1.3:+9166918 MS.gene61684:CDS
TCGATGGATTCTGTCAAGAT+AGG 0.463592 1.3:-9167176 None:intergenic
TACGGATGCCATGATACTTT+AGG 0.463804 1.3:-9166788 None:intergenic
TTTCAAATTCCTTAACAGCC+TGG 0.465100 1.3:-9165869 None:intergenic
AAATATTCATCGACAGATGC+TGG 0.465549 1.3:-9165316 None:intergenic
AGGATTGGTGATGGCGGTGG+CGG 0.467054 1.3:-9163893 None:intergenic
TTGATCCAATCCGAAGTAGA+TGG 0.467929 1.3:-9169542 None:intergenic
GCTGCACATGGTACAATCTT+GGG 0.476181 1.3:-9167667 None:intergenic
TTTCCGAGTATTGTGTTTCA+CGG 0.478137 1.3:-9165023 None:intergenic
AAGCAGCTTCCCCAAATTGT+AGG 0.478821 1.3:-9166818 None:intergenic
AATTTCAAGCTTCAGTGTGC+AGG 0.480226 1.3:+9165792 MS.gene61684:intron
GGGGTCAACGGCGGGAATGA+AGG 0.482884 1.3:-9169615 None:intergenic
CAGCGCAAGGGGTCAACGGC+GGG 0.483041 1.3:-9169623 None:intergenic
CTAATATGGTTCATCAAGAA+AGG 0.485151 1.3:+9165509 MS.gene61684:CDS
GTTGAATTCCTCAGCATCTG+TGG 0.485615 1.3:-9167240 None:intergenic
ATAAACTTAGGCTCGAGTTC+AGG 0.487680 1.3:+9165604 MS.gene61684:CDS
AGAATCCATCGACCTATATC+CGG 0.490265 1.3:+9167187 MS.gene61684:CDS
TTAACAGCCTGGATAGGATC+AGG 0.491802 1.3:-9165858 None:intergenic
CAACATTGTTGAAGAAGGGT+TGG 0.492695 1.3:+9168907 MS.gene61684:CDS
TTTGTCCAGCCAAGGCAAGC+AGG 0.495977 1.3:+9169143 MS.gene61684:intron
TTGCCATGATTCACTTCCCC+AGG 0.497451 1.3:+9165651 MS.gene61684:CDS
GAGAGCAACATTGTTGAAGA+AGG 0.497547 1.3:+9168902 MS.gene61684:CDS
TCTCAAGAGCACATAAACTT+AGG 0.497807 1.3:+9165592 MS.gene61684:CDS
AAATGATGTATACTTGAACT+TGG 0.498024 1.3:-9163930 None:intergenic
GGCATTGAGAGTTGAGGAGA+GGG 0.498285 1.3:-9163872 None:intergenic
ACAGGTGAGAGGTGATTTGC+TGG 0.503058 1.3:-9168986 None:intergenic
CGGCAAATGCACCTGATAAG+AGG 0.504086 1.3:+9167207 MS.gene61684:CDS
AAAGAGGTTGCAATTGCAAA+AGG 0.504487 1.3:+9167832 MS.gene61684:CDS
AACAATCTACTGATGCGGTT+GGG 0.512016 1.3:+9165386 MS.gene61684:CDS
ATTGATGCCTGATCCTATCC+AGG 0.512947 1.3:+9165851 MS.gene61684:CDS
CAAATTGTAGGCAGCGTCTA+CGG 0.518260 1.3:-9166806 None:intergenic
ATCATCTAAGTTAGCGCTTG+GGG 0.519646 1.3:-9169391 None:intergenic
TATCGCATCTATTGGAGAGT+TGG 0.519842 1.3:-9169317 None:intergenic
GAACAATCTACTGATGCGGT+TGG 0.524575 1.3:+9165385 MS.gene61684:CDS
TGAATATTTGGCTGATCCCG+TGG 0.525204 1.3:+9165330 MS.gene61684:CDS
TTGTCCAGCCAAGGCAAGCA+GGG 0.526069 1.3:+9169144 MS.gene61684:intron
TTTAAATGCAACCCAATGCC+TGG 0.526474 1.3:-9166930 None:intergenic
GGGTATTCGCATCATTCTTG+AGG 0.527259 1.3:-9165279 None:intergenic
TCCTCAGGTGGCTTGAAAAG+TGG 0.529192 1.3:+9169567 MS.gene61684:CDS
ATATTAGATTCCTCCAACAA+AGG 0.530012 1.3:-9165493 None:intergenic
CAGAGCCATCTACTTCGGAT+TGG 0.530846 1.3:+9169537 MS.gene61684:CDS
CATCTATTGGAGAGTTGGTA+TGG 0.533401 1.3:-9169312 None:intergenic
AGAAGGATTGGTGATGGCGG+TGG 0.534777 1.3:-9163896 None:intergenic
GCTGGAATCTTCTGTGGCGA+CGG 0.536040 1.3:+9167547 MS.gene61684:CDS
TTGAATTCCTCAGCATCTGT+GGG 0.538648 1.3:-9167239 None:intergenic
TACTCAGAGCATTGCAACAA+TGG 0.538876 1.3:-9169013 None:intergenic
CAGGCTAGCCTAAAGTATCA+TGG 0.540060 1.3:+9166780 MS.gene61684:intron
TTTGCTTTCACAGACTTGAT+GGG 0.542250 1.3:-9169483 None:intergenic
CCACCGTGAAACACAATACT+CGG 0.542340 1.3:+9165020 MS.gene61684:CDS
TTACCTCAGAACCATCTTGT+GGG 0.543543 1.3:-9165938 None:intergenic
GTTATAAACACCTCTGGCAG+TGG 0.544020 1.3:-9165235 None:intergenic
ACATGCTTCTAGCAATGAAA+GGG 0.544689 1.3:+9168880 MS.gene61684:CDS
TCAACCATCCTAGCACCTCC+AGG 0.545986 1.3:+9167258 MS.gene61684:CDS
GTCGCATGAGAAGCCTTGAC+AGG 0.546192 1.3:-9164934 None:intergenic
AATTCCTTAACAGCCTGGAT+AGG 0.546382 1.3:-9165864 None:intergenic
GTTGCACGTCTTAGGTCCAT+TGG 0.547167 1.3:-9167397 None:intergenic
GTGACAGTTTCCAAGCCACC+AGG 0.548258 1.3:+9166912 MS.gene61684:CDS
CTCCACAGAGCCATCTACTT+CGG 0.551057 1.3:+9169532 MS.gene61684:CDS
AATGTCTTTGGCAAGAGAGA+AGG 0.551265 1.3:+9168029 MS.gene61684:CDS
AAGGCTTCTCATGCGACACA+TGG 0.551643 1.3:+9164940 MS.gene61684:CDS
ATTCTCTGAATTTACTTGTG+AGG 0.552178 1.3:-9165913 None:intergenic
ATCCATATTGGACGGAGTTG+AGG 0.552766 1.3:-9167072 None:intergenic
TTAAAATTTGATAGGAGTGA+CGG 0.554336 1.3:+9165442 MS.gene61684:CDS
CAGGTGCATTTGCCGGATAT+AGG 0.554569 1.3:-9167199 None:intergenic
CAGGTGGCTTGAAAAGTGGC+AGG 0.557391 1.3:+9169571 MS.gene61684:CDS
ATTTGTCAAAAGGCTAACGT+TGG 0.564831 1.3:+9167972 MS.gene61684:intron
CCAGTAGTTGAAGCACAACT+AGG 0.567291 1.3:-9166975 None:intergenic
TTTGGTGCTGGAATCTTCTG+TGG 0.572134 1.3:+9167541 MS.gene61684:CDS
GGCGACGGTTGTGCTTGCGA+AGG 0.572382 1.3:+9167562 MS.gene61684:CDS
AACGTAGGAGACAACAGTCT+TGG 0.572639 1.3:+9165172 MS.gene61684:CDS
ATCTTGGGAGCAAATGCTTG+TGG 0.574082 1.3:-9167652 None:intergenic
AAAATCCTGCAACAATTGAA+GGG 0.574303 1.3:+9165545 MS.gene61684:CDS
TGGATACATTTGATCGTCCA+CGG 0.575264 1.3:-9165347 None:intergenic
GAATCAGCGCAAGGGGTCAA+CGG 0.575782 1.3:-9169627 None:intergenic
AACATGCTTCTAGCAATGAA+AGG 0.575833 1.3:+9168879 MS.gene61684:CDS
CGATATTCGCCAGTTATCTG+GGG 0.577587 1.3:+9169335 MS.gene61684:CDS
GATGTATACTTGAACTTGGG+GGG 0.580200 1.3:-9163926 None:intergenic
TTACCTGGGGAAGTGAATCA+TGG 0.582239 1.3:-9165654 None:intergenic
CCGAGTATTGTGTTTCACGG+TGG 0.583708 1.3:-9165020 None:intergenic
GATTCTAAAGTCCTTTGCAA+TGG 0.584197 1.3:+9169645 MS.gene61684:CDS
AGAGCAACATTGTTGAAGAA+GGG 0.586625 1.3:+9168903 MS.gene61684:CDS
GACTTTAGAATCAGCGCAAG+GGG 0.586639 1.3:-9169634 None:intergenic
AGATTATCAGATGGTATACA+GGG 0.586972 1.3:+9167002 MS.gene61684:CDS
TCAGAGAATATCCCACAAGA+TGG 0.588289 1.3:+9165927 MS.gene61684:CDS
TAGACGCTGCCTACAATTTG+GGG 0.588410 1.3:+9166809 MS.gene61684:CDS
GATTGATCATCCATATTGGA+CGG 0.592859 1.3:-9167080 None:intergenic
ATAGGATCAGGCATCAATTG+AGG 0.595329 1.3:-9165846 None:intergenic
TGACAACACCGGCATCAGCT+AGG 0.595994 1.3:+9167805 MS.gene61684:CDS
TTCTGTCAAGATAGGAGACT+CGG 0.595997 1.3:-9167168 None:intergenic
ATTTGAAAATTGCAGTGAGA+TGG 0.600065 1.3:+9165884 MS.gene61684:CDS
TTCATCAGAAGGATTGGTGA+TGG 0.602391 1.3:-9163902 None:intergenic
ATTACCTCAGAACCATCTTG+TGG 0.602494 1.3:-9165939 None:intergenic
GGACTTTAGAATCAGCGCAA+GGG 0.602915 1.3:-9169635 None:intergenic
GCAACTGTTATAAACACCTC+TGG 0.607058 1.3:-9165241 None:intergenic
GGATACATTTGATCGTCCAC+GGG 0.608080 1.3:-9165346 None:intergenic
TTCTCAGCAGCCACTGCCAG+AGG 0.609773 1.3:+9165225 MS.gene61684:CDS
AACTTAGATGATGAATCAGA+TGG 0.610248 1.3:+9169402 MS.gene61684:CDS
GGTTGTGCTTGCGAAGGCTG+TGG 0.610748 1.3:+9167568 MS.gene61684:CDS
CGAAGTAGATGGCTCTGTGG+AGG 0.611110 1.3:-9169531 None:intergenic
GTCATCATCACTAACTGAGT+CGG 0.611386 1.3:+9165408 MS.gene61684:CDS
ATGATGTATACTTGAACTTG+GGG 0.612101 1.3:-9163928 None:intergenic
TCTGTAGATGAAGAACGTGT+AGG 0.614632 1.3:-9169267 None:intergenic
AGTCCTTTGCAATGGCAATG+AGG 0.616936 1.3:+9169653 MS.gene61684:CDS
GCATCAGCTAGGCACAAAAG+AGG 0.618145 1.3:+9167816 MS.gene61684:CDS
GTCTCCAATAAAGCCTGTCA+AGG 0.618547 1.3:+9164921 MS.gene61684:CDS
CGGCATTGAGAGTTGAGGAG+AGG 0.620492 1.3:-9163873 None:intergenic
TATCCCACAAGATGGTTCTG+AGG 0.620911 1.3:+9165935 MS.gene61684:CDS
CTATTGGAGAGTTGGTATGG+TGG 0.623132 1.3:-9169309 None:intergenic
ATTGGATCAAGCTCCTCAGG+TGG 0.623354 1.3:+9169555 MS.gene61684:CDS
AATCCTCATTGCCATTGCAA+AGG 0.624686 1.3:-9169656 None:intergenic
CGCGGAGACTTGAATACGAG+AGG 0.625882 1.3:-9164985 None:intergenic
AGGACTTTAGAATCAGCGCA+AGG 0.627509 1.3:-9169636 None:intergenic
ATTGAGAGTTGAGGAGAGGG+AGG 0.627995 1.3:-9163869 None:intergenic
TCAGCGCAAGGGGTCAACGG+CGG 0.628739 1.3:-9169624 None:intergenic
TCTTATACCATATTATTCAG+TGG 0.629452 1.3:-9167697 None:intergenic
CAAATGCACCTGATAAGAGG+AGG 0.630195 1.3:+9167210 MS.gene61684:CDS
CTTATTACTTCCAAGAACAA+CGG 0.633004 1.3:-9166841 None:intergenic
ACAAGTACTGATGATGCCAA+TGG 0.639150 1.3:+9167381 MS.gene61684:CDS
CTTCATCTACAGAAAATGAG+TGG 0.639866 1.3:+9169277 MS.gene61684:CDS
GTGAAACACAATACTCGGAA+AGG 0.645194 1.3:+9165025 MS.gene61684:CDS
AAATCCTGCAACAATTGAAG+GGG 0.646037 1.3:+9165546 MS.gene61684:CDS
AGGCTTCTCATGCGACACAT+GGG 0.646230 1.3:+9164941 MS.gene61684:CDS
GAGTATTGTGTTTCACGGTG+GGG 0.646389 1.3:-9165018 None:intergenic
ATCAGAAGGATTGGTGATGG+CGG 0.649908 1.3:-9163899 None:intergenic
GGTACGCCCCACAGATGCTG+AGG 0.649944 1.3:+9167232 MS.gene61684:CDS
GGTGGCGGCATTGAGAGTTG+AGG 0.650716 1.3:-9163878 None:intergenic
TCGACTGGATGTCGATGTGA+TGG 0.651749 1.3:+9167999 MS.gene61684:CDS
GAAACATCTCAAAGTAACGT+AGG 0.652192 1.3:+9165157 MS.gene61684:CDS
AGTGGAACATCAGCTGCACA+TGG 0.663360 1.3:-9167679 None:intergenic
TGATGTATACTTGAACTTGG+GGG 0.665983 1.3:-9163927 None:intergenic
AATGGAACAATCTACTGATG+CGG 0.671669 1.3:+9165381 MS.gene61684:CDS
CGGTGGGGAGCACTGATACG+CGG 0.675366 1.3:-9165003 None:intergenic
AAATGCACCTGATAAGAGGA+GGG 0.675925 1.3:+9167211 MS.gene61684:CDS
ATTTGCCGGATATAGGTCGA+TGG 0.681858 1.3:-9167192 None:intergenic
GATATTCGCCAGTTATCTGG+GGG 0.691155 1.3:+9169336 MS.gene61684:CDS
AAATGCAACCCAATGCCTGG+TGG 0.691964 1.3:-9166927 None:intergenic
ACTGGTGTGAGATTATCAGA+TGG 0.692029 1.3:+9166993 MS.gene61684:CDS
GGAGACTTGAATACGAGAGG+TGG 0.694779 1.3:-9164982 None:intergenic
AGATGTGAATATGACAACAC+CGG 0.696103 1.3:+9167794 MS.gene61684:CDS
TTTGCATATAGTGGAAAACG+TGG 0.696559 1.3:+9167043 MS.gene61684:CDS
TGAATTCCTCAGCATCTGTG+GGG 0.698955 1.3:-9167238 None:intergenic
GTAGTTGAAGCACAACTAGG+TGG 0.703404 1.3:-9166972 None:intergenic
ATCCGAAGTAGATGGCTCTG+TGG 0.709057 1.3:-9169534 None:intergenic
ACAATGGTGTTACAGGTGAG+AGG 0.709448 1.3:-9168997 None:intergenic
GAATGTGCCAGACTGCTGCG+TGG 0.712112 1.3:-9169216 None:intergenic
TATTCATCGACAGATGCTGG+AGG 0.729564 1.3:-9165313 None:intergenic
GATTATCAGATGGTATACAG+GGG 0.764872 1.3:+9167003 MS.gene61684:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATATTAAAATTTGAT+AGG + chr1.3:9165434-9165453 MS.gene61684:CDS 10.0%
!!! AAATACAATAACATAATTTT+TGG + chr1.3:9168519-9168538 MS.gene61684:intron 10.0%
!!! CTTTTATTTTTTTTAATCAT+TGG + chr1.3:9166144-9166163 MS.gene61684:intron 10.0%
!!! TATTTTAAATATTTGTCAAA+AGG + chr1.3:9167962-9167981 MS.gene61684:intron 10.0%
!! AAATTATGTTATTGTATTTC+AGG - chr1.3:9168518-9168537 None:intergenic 15.0%
!! AATTATGTTATTGTATTTCA+GGG - chr1.3:9168517-9168536 None:intergenic 15.0%
!! ACACAATAAATGAAATAAAA+TGG - chr1.3:9164130-9164149 None:intergenic 15.0%
!! ATATTTATAATGCTGATATA+GGG + chr1.3:9165701-9165720 MS.gene61684:intron 15.0%
!! TATATTTATAATGCTGATAT+AGG + chr1.3:9165700-9165719 MS.gene61684:intron 15.0%
!! TTTCACAAGAAAATAAAAAA+AGG + chr1.3:9164304-9164323 MS.gene61684:intron 15.0%
!!! AAATATCACCTAATTTTTTA+AGG - chr1.3:9167755-9167774 None:intergenic 15.0%
!!! AGAAATTTTAGAAACTAAAT+TGG - chr1.3:9168481-9168500 None:intergenic 15.0%
!!! AGCAATTTTTCTTAAATTTT+AGG + chr1.3:9168673-9168692 MS.gene61684:intron 15.0%
!!! CAATTTTTCTTAAATTTTAG+GGG + chr1.3:9168675-9168694 MS.gene61684:intron 15.0%
!!! GAAATTTTAGAAACTAAATT+GGG - chr1.3:9168480-9168499 None:intergenic 15.0%
!!! GCAATTTTTCTTAAATTTTA+GGG + chr1.3:9168674-9168693 MS.gene61684:intron 15.0%
!!! TAATTGATTTTTTTTCTTTC+AGG + chr1.3:9165958-9165977 MS.gene61684:intron 15.0%
!!! TTTGTTTTTAAAGAAGTATT+AGG + chr1.3:9168386-9168405 MS.gene61684:intron 15.0%
!! AAAAGTCAGCAATAATTTAT+TGG + chr1.3:9166594-9166613 MS.gene61684:intron 20.0%
!! AAATAAATTCCTATAACATG+TGG - chr1.3:9168603-9168622 None:intergenic 20.0%
!! CACATTAAAATGAATACATA+TGG + chr1.3:9168576-9168595 MS.gene61684:intron 20.0%
!! TATAAGGTTATCAATTAGAT+CGG + chr1.3:9164248-9164267 MS.gene61684:intron 20.0%
!! TATAGGAATTTATTTCAGTA+TGG + chr1.3:9168608-9168627 MS.gene61684:intron 20.0%
!! TCTTTACGATTATTATGTTA+TGG + chr1.3:9164032-9164051 MS.gene61684:intron 20.0%
!! TGGAATTATATTTGTTTGAT+TGG + chr1.3:9164578-9164597 MS.gene61684:intron 20.0%
!! TTTGCATCAAAATGAATATA+AGG + chr1.3:9164232-9164251 MS.gene61684:intron 20.0%
!!! ATAATTTTTGGTACTTCTTT+TGG + chr1.3:9168531-9168550 MS.gene61684:intron 20.0%
!!! ATTTAGAGCATATAGAAATA+TGG - chr1.3:9167908-9167927 None:intergenic 20.0%
!!! ATTTTAATGCAAAAATGAGA+CGG - chr1.3:9164660-9164679 None:intergenic 20.0%
!!! CATATGTATTCATTTTAATG+TGG - chr1.3:9168578-9168597 None:intergenic 20.0%
!!! TTTTTTAAATGCAGATTTTG+TGG + chr1.3:9168850-9168869 MS.gene61684:intron 20.0%
! AAAAAACTTAAAAGATGTGC+TGG - chr1.3:9168207-9168226 None:intergenic 25.0%
! AAAAACTTAAAAGATGTGCT+GGG - chr1.3:9168206-9168225 None:intergenic 25.0%
! AAAAGATTGATCATCCATAT+TGG - chr1.3:9167087-9167106 None:intergenic 25.0%
! AAACTTGATAAGCAGAAAAA+TGG - chr1.3:9166393-9166412 None:intergenic 25.0%
! AAAGTTCATATATTCATCAG+AGG - chr1.3:9165995-9166014 None:intergenic 25.0%
! AAATGATGTATACTTGAACT+TGG - chr1.3:9163933-9163952 None:intergenic 25.0%
! AACTTGATAAGCAGAAAAAT+GGG - chr1.3:9166392-9166411 None:intergenic 25.0%
! AATATTGCATTGCTCTATAT+AGG + chr1.3:9167352-9167371 MS.gene61684:intron 25.0%
! AATGATGTATACTTGAACTT+GGG - chr1.3:9163932-9163951 None:intergenic 25.0%
! AATGGAATGAAACAAAAAGT+AGG - chr1.3:9164186-9164205 None:intergenic 25.0%
! ACATCTCTAAACAAAAAAGA+CGG - chr1.3:9164746-9164765 None:intergenic 25.0%
! ATAAACAAAATCATTCAGAG+AGG - chr1.3:9166052-9166071 None:intergenic 25.0%
! ATATAGAGCAATGCAATATT+TGG - chr1.3:9167352-9167371 None:intergenic 25.0%
! ATGCAAACTTATAGAAGATT+TGG - chr1.3:9167030-9167049 None:intergenic 25.0%
! ATTGCATATCATAGAAAGTA+TGG - chr1.3:9167477-9167496 None:intergenic 25.0%
! GGGTAGCATAATTAATTAAT+TGG - chr1.3:9163966-9163985 None:intergenic 25.0%
! GTTCAAATTCTACTATGTTA+CGG + chr1.3:9164388-9164407 MS.gene61684:intron 25.0%
! TACAATGCAATGTCAAATAA+CGG - chr1.3:9164416-9164435 None:intergenic 25.0%
! TCTTATACCATATTATTCAG+TGG - chr1.3:9167700-9167719 None:intergenic 25.0%
! TGACAAAATTTGTATGTATC+AGG + chr1.3:9165107-9165126 MS.gene61684:intron 25.0%
! TTAAAATTTGATAGGAGTGA+CGG + chr1.3:9165442-9165461 MS.gene61684:CDS 25.0%
! TTCTATAAGTTTGCATATAG+TGG + chr1.3:9167034-9167053 MS.gene61684:CDS 25.0%
! TTTATTGTGTTAGACATGTT+TGG + chr1.3:9164140-9164159 MS.gene61684:intron 25.0%
!! AAAATACTGTGAATGTTTTC+AGG + chr1.3:9167869-9167888 MS.gene61684:CDS 25.0%
!! AAATGTTATGGATTGATGTT+GGG + chr1.3:9168127-9168146 MS.gene61684:intron 25.0%
!! ATGTTTCTGTATCTGATAAA+TGG - chr1.3:9165144-9165163 None:intergenic 25.0%
!! TAAATGTTATGGATTGATGT+TGG + chr1.3:9168126-9168145 MS.gene61684:intron 25.0%
!! TGTTTCTGTATCTGATAAAT+GGG - chr1.3:9165143-9165162 None:intergenic 25.0%
!!! CATTTCTAGTATCACAAAAA+AGG + chr1.3:9164830-9164849 MS.gene61684:intron 25.0%
!!! TCATTGATCTAGTTTGTTTA+TGG + chr1.3:9166253-9166272 MS.gene61684:intron 25.0%
!!! TTATCAAGTTTTGCTTTGTT+TGG + chr1.3:9166402-9166421 MS.gene61684:intron 25.0%
AAAATCCTGCAACAATTGAA+GGG + chr1.3:9165545-9165564 MS.gene61684:CDS 30.0%
AACAGTCAATTATCAAAGTG+CGG - chr1.3:9164544-9164563 None:intergenic 30.0%
AACTTAGATGATGAATCAGA+TGG + chr1.3:9169402-9169421 MS.gene61684:CDS 30.0%
ACTTGATAAGCAGAAAAATG+GGG - chr1.3:9166391-9166410 None:intergenic 30.0%
AGAATATTGTTCCAGAGATA+TGG - chr1.3:9164446-9164465 None:intergenic 30.0%
AGATTATCAGATGGTATACA+GGG + chr1.3:9167002-9167021 MS.gene61684:CDS 30.0%
ATAATTGTTACAGTCAATGC+AGG + chr1.3:9166761-9166780 MS.gene61684:intron 30.0%
ATATTAGATTCCTCCAACAA+AGG - chr1.3:9165496-9165515 None:intergenic 30.0%
ATGATGTATACTTGAACTTG+GGG - chr1.3:9163931-9163950 None:intergenic 30.0%
ATTCTCTGAATTTACTTGTG+AGG - chr1.3:9165916-9165935 None:intergenic 30.0%
ATTTGAAAATTGCAGTGAGA+TGG + chr1.3:9165884-9165903 MS.gene61684:CDS 30.0%
ATTTGGTAAAACTAGCAAAC+AGG - chr1.3:9167335-9167354 None:intergenic 30.0%
CCTTATAAGGAAAATTGTTG+AGG + chr1.3:9168176-9168195 MS.gene61684:intron 30.0%
CTAATATGGTTCATCAAGAA+AGG + chr1.3:9165509-9165528 MS.gene61684:CDS 30.0%
CTTATTACTTCCAAGAACAA+CGG - chr1.3:9166844-9166863 None:intergenic 30.0%
GTTATCATGATCTTTCTCAT+AGG + chr1.3:9167290-9167309 MS.gene61684:intron 30.0%
GTTTATAACAGTTGCTCAAA+AGG + chr1.3:9165249-9165268 MS.gene61684:CDS 30.0%
TCCAAATACTAGTCCTTATA+AGG + chr1.3:9168163-9168182 MS.gene61684:intron 30.0%
TGATGTTCCACTGAATAATA+TGG + chr1.3:9167690-9167709 MS.gene61684:CDS 30.0%
TGGGTTAATTAACATAAGAG+AGG - chr1.3:9164635-9164654 None:intergenic 30.0%
TTTAACGAAATTAGCAGAAG+TGG + chr1.3:9166304-9166323 MS.gene61684:intron 30.0%
TTTGTTGGAGGAATCTAATA+TGG + chr1.3:9165495-9165514 MS.gene61684:CDS 30.0%
! AATAAAAGTGTATTCAAGCC+TGG - chr1.3:9166132-9166151 None:intergenic 30.0%
! AGACAATGTTGTTTGATGAA+TGG - chr1.3:9164204-9164223 None:intergenic 30.0%
! CCTCAACAATTTTCCTTATA+AGG - chr1.3:9168179-9168198 None:intergenic 30.0%
! CTAAATACTAGTCTCTTTAG+AGG + chr1.3:9166097-9166116 MS.gene61684:intron 30.0%
! GCAATAATTTATTGGCTACA+AGG + chr1.3:9166602-9166621 MS.gene61684:intron 30.0%
! GTGTTGACAAATCTCAAAAA+GGG - chr1.3:9164898-9164917 None:intergenic 30.0%
! TCCTTATAAGGACTAGTATT+TGG - chr1.3:9168167-9168186 None:intergenic 30.0%
! TGCATATTTCTGCATAAGAT+AGG + chr1.3:9166332-9166351 MS.gene61684:intron 30.0%
!! AAATTCACTAGACTTGCTTT+TGG + chr1.3:9164604-9164623 MS.gene61684:intron 30.0%
!! ACATGTATTTTGTTTGCACT+TGG + chr1.3:9166200-9166219 MS.gene61684:intron 30.0%
!! AGTGTTGACAAATCTCAAAA+AGG - chr1.3:9164899-9164918 None:intergenic 30.0%
!! CATGATAACTAACTTTTTCC+TGG - chr1.3:9167279-9167298 None:intergenic 30.0%
!! TAAATTTTAGGGGTTCAAAC+TGG + chr1.3:9168685-9168704 MS.gene61684:intron 30.0%
!!! AGAGTTGCATTTTGATTATC+AGG + chr1.3:9166688-9166707 MS.gene61684:intron 30.0%
AAAGAGGTTGCAATTGCAAA+AGG + chr1.3:9167832-9167851 MS.gene61684:CDS 35.0%
AAATATTCATCGACAGATGC+TGG - chr1.3:9165319-9165338 None:intergenic 35.0%
AAATCCTGCAACAATTGAAG+GGG + chr1.3:9165546-9165565 MS.gene61684:CDS 35.0%
AACAAAATCATTCAGAGAGG+AGG - chr1.3:9166049-9166068 None:intergenic 35.0%
AACATGCTTCTAGCAATGAA+AGG + chr1.3:9168879-9168898 MS.gene61684:CDS 35.0%
AACTTCAAGCAACGCAAAAA+TGG + chr1.3:9166884-9166903 MS.gene61684:CDS 35.0%
AATGGAACAATCTACTGATG+CGG + chr1.3:9165381-9165400 MS.gene61684:CDS 35.0%
ACAAAATCATTCAGAGAGGA+GGG - chr1.3:9166048-9166067 None:intergenic 35.0%
ACAATTGAAGGGGAGAAAAA+TGG + chr1.3:9165556-9165575 MS.gene61684:CDS 35.0%
ACATATGGTCCACATGTTAT+AGG + chr1.3:9168591-9168610 MS.gene61684:intron 35.0%
ACATGCTTCTAGCAATGAAA+GGG + chr1.3:9168880-9168899 MS.gene61684:CDS 35.0%
ACTCTGTCTGTCTTTATGTT+TGG + chr1.3:9164082-9164101 MS.gene61684:intron 35.0%
AGAGCAACATTGTTGAAGAA+GGG + chr1.3:9168903-9168922 MS.gene61684:CDS 35.0%
AGATGTGAATATGACAACAC+CGG + chr1.3:9167794-9167813 MS.gene61684:CDS 35.0%
AGCATCTGTCGATGAATATT+TGG + chr1.3:9165318-9165337 MS.gene61684:CDS 35.0%
AGTTCTTCTGCTATGTTACT+AGG - chr1.3:9165469-9165488 None:intergenic 35.0%
ATATTCACATCTTCCTGCAA+AGG - chr1.3:9167786-9167805 None:intergenic 35.0%
ATTTGCTTTCACAGACTTGA+TGG - chr1.3:9169487-9169506 None:intergenic 35.0%
ATTTGTCAAAAGGCTAACGT+TGG + chr1.3:9167972-9167991 MS.gene61684:intron 35.0%
CAGTAGATTGTTCCATTTCT+GGG - chr1.3:9165378-9165397 None:intergenic 35.0%
CTTCATCTACAGAAAATGAG+TGG + chr1.3:9169277-9169296 MS.gene61684:CDS 35.0%
CTTGATAAGCAGAAAAATGG+GGG - chr1.3:9166390-9166409 None:intergenic 35.0%
GAAAATCCTGCAACAATTGA+AGG + chr1.3:9165544-9165563 MS.gene61684:CDS 35.0%
GAAACATCTCAAAGTAACGT+AGG + chr1.3:9165157-9165176 MS.gene61684:CDS 35.0%
GACAGAAAATTGTGACAATC+AGG + chr1.3:9168948-9168967 MS.gene61684:CDS 35.0%
GAGATTATCAGATGGTATAC+AGG + chr1.3:9167001-9167020 MS.gene61684:CDS 35.0%
GATATTACATCATGGACTCA+AGG + chr1.3:9166495-9166514 MS.gene61684:intron 35.0%
GATCAATCAAAAGAGACTAG+AGG - chr1.3:9165767-9165786 None:intergenic 35.0%
GATGGATGTATGAATGTCTT+TGG + chr1.3:9168017-9168036 MS.gene61684:CDS 35.0%
GATTATCAGATGGTATACAG+GGG + chr1.3:9167003-9167022 MS.gene61684:CDS 35.0%
GATTGATCATCCATATTGGA+CGG - chr1.3:9167083-9167102 None:intergenic 35.0%
GTACTGTGCTCTTCTTTAAT+TGG - chr1.3:9166182-9166201 None:intergenic 35.0%
GTGTAATGGCATTATCTACT+TGG + chr1.3:9166654-9166673 MS.gene61684:intron 35.0%
GTTTGGAGGTTTCAAAATTG+TGG + chr1.3:9166419-9166438 MS.gene61684:intron 35.0%
TATAGTTGACATCCACATGA+GGG + chr1.3:9168781-9168800 MS.gene61684:intron 35.0%
TCAGTAGATTGTTCCATTTC+TGG - chr1.3:9165379-9165398 None:intergenic 35.0%
TCTTGTGAAAACTCAGTATC+CGG - chr1.3:9164294-9164313 None:intergenic 35.0%
TGAAACACCTGATGTATTGA+AGG + chr1.3:9169449-9169468 MS.gene61684:CDS 35.0%
TGAGAGACTAAACTGAAAGT+TGG + chr1.3:9168719-9168738 MS.gene61684:intron 35.0%
TGAGTCCATGATGTAATATC+AGG - chr1.3:9166495-9166514 None:intergenic 35.0%
TGATGTATACTTGAACTTGG+GGG - chr1.3:9163930-9163949 None:intergenic 35.0%
TGATTCTTAGATCCTTAGAC+CGG + chr1.3:9164272-9164291 MS.gene61684:intron 35.0%
TGGTAACAGAGTAGAATTTC+AGG + chr1.3:9167588-9167607 MS.gene61684:CDS 35.0%
TGTACTGAATACCATATCTC+TGG + chr1.3:9164432-9164451 MS.gene61684:intron 35.0%
TTCTTAATCTGAGAAGCTTC+TGG - chr1.3:9163835-9163854 None:intergenic 35.0%
TTGATAAGCAGAAAAATGGG+GGG - chr1.3:9166389-9166408 None:intergenic 35.0%
TTTCAAATTCCTTAACAGCC+TGG - chr1.3:9165872-9165891 None:intergenic 35.0%
TTTGCTTTCACAGACTTGAT+GGG - chr1.3:9169486-9169505 None:intergenic 35.0%
TTTGTATGTATCAGGCTTGA+AGG + chr1.3:9165115-9165134 MS.gene61684:intron 35.0%
! AAATGCAGATTTTGTGGCAA+TGG + chr1.3:9168856-9168875 MS.gene61684:intron 35.0%
! AGAAGAACTTTTGCCTTTGT+TGG + chr1.3:9165480-9165499 MS.gene61684:CDS 35.0%
! TCTCAAGAGCACATAAACTT+AGG + chr1.3:9165592-9165611 MS.gene61684:CDS 35.0%
! TGCAGTTACTGTGATTGTTT+TGG + chr1.3:9167523-9167542 MS.gene61684:intron 35.0%
! TTTCCGAGTATTGTGTTTCA+CGG - chr1.3:9165026-9165045 None:intergenic 35.0%
! TTTGCATATAGTGGAAAACG+TGG + chr1.3:9167043-9167062 MS.gene61684:CDS 35.0%
!! ACACAGTTTAACTTGTTGTC+TGG + chr1.3:9168097-9168116 MS.gene61684:intron 35.0%
!! CCTGCTAGCCTTAAAAAATT+AGG + chr1.3:9167744-9167763 MS.gene61684:intron 35.0%
!! CTACAAGGTTTTAGTCATGT+AGG + chr1.3:9166617-9166636 MS.gene61684:intron 35.0%
!! GATAACTAACTTTTTCCTGG+AGG - chr1.3:9167276-9167295 None:intergenic 35.0%
!! GATTCTAAAGTCCTTTGCAA+TGG + chr1.3:9169645-9169664 MS.gene61684:CDS 35.0%
!! TAAGGGCATCTCTTAGAATA+AGG + chr1.3:9166519-9166538 MS.gene61684:intron 35.0%
!!! CCTAATTTTTTAAGGCTAGC+AGG - chr1.3:9167747-9167766 None:intergenic 35.0%
!!! GCGTGGTTTTTTAGAAGATT+TGG - chr1.3:9169202-9169221 None:intergenic 35.0%
!!! TCAAGTTTTGCTTTGTTTGG+AGG + chr1.3:9166405-9166424 MS.gene61684:intron 35.0%
AAAACTCAGTATCCGGTCTA+AGG - chr1.3:9164287-9164306 None:intergenic 40.0%
AAATGCACCTGATAAGAGGA+GGG + chr1.3:9167211-9167230 MS.gene61684:CDS 40.0%
AACAATCTACTGATGCGGTT+GGG + chr1.3:9165386-9165405 MS.gene61684:CDS 40.0%
AACACAGCACTGTCAAATAG+TGG - chr1.3:9164481-9164500 None:intergenic 40.0%
AATCCTCATTGCCATTGCAA+AGG - chr1.3:9169659-9169678 None:intergenic 40.0%
AATGCAAAAATGAGACGGTG+TGG - chr1.3:9164655-9164674 None:intergenic 40.0%
AATGTCTTTGGCAAGAGAGA+AGG + chr1.3:9168029-9168048 MS.gene61684:CDS 40.0%
AATTCCTTAACAGCCTGGAT+AGG - chr1.3:9165867-9165886 None:intergenic 40.0%
AATTTCAAGCTTCAGTGTGC+AGG + chr1.3:9165792-9165811 MS.gene61684:intron 40.0%
ACATCATGGACTCAAGGTTA+AGG + chr1.3:9166501-9166520 MS.gene61684:intron 40.0%
ACTGGTGTGAGATTATCAGA+TGG + chr1.3:9166993-9167012 MS.gene61684:CDS 40.0%
AGAATCCATCGACCTATATC+CGG + chr1.3:9167187-9167206 MS.gene61684:CDS 40.0%
ATAAACTTAGGCTCGAGTTC+AGG + chr1.3:9165604-9165623 MS.gene61684:CDS 40.0%
ATAGGATCAGGCATCAATTG+AGG - chr1.3:9165849-9165868 None:intergenic 40.0%
ATCATCTAAGTTAGCGCTTG+GGG - chr1.3:9169394-9169413 None:intergenic 40.0%
ATGAGACTACAGTGGTGTAA+TGG + chr1.3:9166640-9166659 MS.gene61684:intron 40.0%
ATGCAAAAATGAGACGGTGT+GGG - chr1.3:9164654-9164673 None:intergenic 40.0%
ATTACCTCAGAACCATCTTG+TGG - chr1.3:9165942-9165961 None:intergenic 40.0%
ATTAGCCGTATGTGCATTGT+CGG + chr1.3:9164688-9164707 MS.gene61684:intron 40.0%
ATTTGACAGTGCTGTGTTCA+TGG + chr1.3:9164483-9164502 MS.gene61684:intron 40.0%
CAACATTGTTGAAGAAGGGT+TGG + chr1.3:9168907-9168926 MS.gene61684:CDS 40.0%
CATCATCTAAGTTAGCGCTT+GGG - chr1.3:9169395-9169414 None:intergenic 40.0%
CATCATGGACTCAAGGTTAA+GGG + chr1.3:9166502-9166521 MS.gene61684:intron 40.0%
CGAGTCCTGATATTACATCA+TGG + chr1.3:9166487-9166506 MS.gene61684:intron 40.0%
CTTGTCGTCTTCTTCATTTC+AGG + chr1.3:9164867-9164886 MS.gene61684:intron 40.0%
GAAGCTTCCTTCAATACATC+AGG - chr1.3:9169459-9169478 None:intergenic 40.0%
GAGAGCAACATTGTTGAAGA+AGG + chr1.3:9168902-9168921 MS.gene61684:CDS 40.0%
GATGTATACTTGAACTTGGG+GGG - chr1.3:9163929-9163948 None:intergenic 40.0%
GCAACTGTTATAAACACCTC+TGG - chr1.3:9165244-9165263 None:intergenic 40.0%
GTATAGTTGACATCCACATG+AGG + chr1.3:9168780-9168799 MS.gene61684:intron 40.0%
GTCATCATCACTAACTGAGT+CGG + chr1.3:9165408-9165427 MS.gene61684:CDS 40.0%
GTGAAACACAATACTCGGAA+AGG + chr1.3:9165025-9165044 MS.gene61684:CDS 40.0%
TACGGATGCCATGATACTTT+AGG - chr1.3:9166791-9166810 None:intergenic 40.0%
TACTGGCAGCATAAAGCAAA+GGG - chr1.3:9168332-9168351 None:intergenic 40.0%
TATCGCATCTATTGGAGAGT+TGG - chr1.3:9169320-9169339 None:intergenic 40.0%
TCAGAGAATATCCCACAAGA+TGG + chr1.3:9165927-9165946 MS.gene61684:CDS 40.0%
TCATCATCTAAGTTAGCGCT+TGG - chr1.3:9169396-9169415 None:intergenic 40.0%
TCTGTAGATGAAGAACGTGT+AGG - chr1.3:9169270-9169289 None:intergenic 40.0%
TGGATACATTTGATCGTCCA+CGG - chr1.3:9165350-9165369 None:intergenic 40.0%
TGTCAAGAACCCCAATCAAA+GGG - chr1.3:9163989-9164008 None:intergenic 40.0%
TTAATCAATGTTGTCCGTCG+TGG + chr1.3:9164345-9164364 MS.gene61684:intron 40.0%
TTACCTCAGAACCATCTTGT+GGG - chr1.3:9165941-9165960 None:intergenic 40.0%
TTACTGGCAGCATAAAGCAA+AGG - chr1.3:9168333-9168352 None:intergenic 40.0%
TTCTGTCAAGATAGGAGACT+CGG - chr1.3:9167171-9167190 None:intergenic 40.0%
TTCTTACAGTTGCACGTCTT+AGG - chr1.3:9167408-9167427 None:intergenic 40.0%
TTGAATTCCTCAGCATCTGT+GGG - chr1.3:9167242-9167261 None:intergenic 40.0%
TTGATCCAATCCGAAGTAGA+TGG - chr1.3:9169545-9169564 None:intergenic 40.0%
TTGCAATGGCAATGAGGATT+CGG + chr1.3:9169659-9169678 MS.gene61684:CDS 40.0%
TTGGCTGGACAAATGCAAAA+AGG - chr1.3:9169136-9169155 None:intergenic 40.0%
TTTAAATGCAACCCAATGCC+TGG - chr1.3:9166933-9166952 None:intergenic 40.0%
! ACTGTTGTGAGAGACTTGTT+TGG + chr1.3:9164558-9164577 MS.gene61684:intron 40.0%
! AGAACTTTTGCCTTTGTTGG+AGG + chr1.3:9165483-9165502 MS.gene61684:CDS 40.0%
! AGCAAATGCTTGTGGATTAC+GGG - chr1.3:9167647-9167666 None:intergenic 40.0%
! CTACTGAAGCATCAGTTTCA+TGG - chr1.3:9167130-9167149 None:intergenic 40.0%
! CTTTAGAGGTTAATGACTCC+AGG + chr1.3:9166111-9166130 MS.gene61684:intron 40.0%
! GAGCAAATGCTTGTGGATTA+CGG - chr1.3:9167648-9167667 None:intergenic 40.0%
! GGAGAAAAATGGTGCTGAAT+TGG + chr1.3:9165567-9165586 MS.gene61684:CDS 40.0%
! GGAGAAACTCTCTTTTGGAT+TGG - chr1.3:9169513-9169532 None:intergenic 40.0%
! GTCCTTTCATTTGTGCTGAT+TGG + chr1.3:9169110-9169129 MS.gene61684:intron 40.0%
! TCGATGGATTCTGTCAAGAT+AGG - chr1.3:9167179-9167198 None:intergenic 40.0%
! TGTTATGGATTGATGTTGGG+AGG + chr1.3:9168130-9168149 MS.gene61684:intron 40.0%
! TTCATCAGAAGGATTGGTGA+TGG - chr1.3:9163905-9163924 None:intergenic 40.0%
! TTTTTGCATTTGTCCAGCCA+AGG + chr1.3:9169135-9169154 MS.gene61684:intron 40.0%
!! ACAAGTACTGATGATGCCAA+TGG + chr1.3:9167381-9167400 MS.gene61684:CDS 40.0%
!! CATCTATTGGAGAGTTGGTA+TGG - chr1.3:9169315-9169334 None:intergenic 40.0%
!! CATTGCAACAATGGTGTTAC+AGG - chr1.3:9169007-9169026 None:intergenic 40.0%
!! CTATTTTTCGCAATCCACGA+CGG - chr1.3:9164362-9164381 None:intergenic 40.0%
!! TACTCAGAGCATTGCAACAA+TGG - chr1.3:9169016-9169035 None:intergenic 40.0%
!!! TACTGTGATTGTTTTGGTGC+TGG + chr1.3:9167529-9167548 MS.gene61684:CDS 40.0%
!!! TATTTTGATGCGACCTTTGC+AGG + chr1.3:9167770-9167789 MS.gene61684:intron 40.0%
AACGTAGGAGACAACAGTCT+TGG + chr1.3:9165172-9165191 MS.gene61684:CDS 45.0%
AAGCAGCTTCCCCAAATTGT+AGG - chr1.3:9166821-9166840 None:intergenic 45.0%
AAGTTAGCGCTTGGGGTAAT+CGG - chr1.3:9169387-9169406 None:intergenic 45.0%
ACAGCAAGAGCTTAGTTACC+TGG - chr1.3:9165672-9165691 None:intergenic 45.0%
ACCATCTCTAGCATTCTACC+TGG - chr1.3:9168286-9168305 None:intergenic 45.0%
ACTGGCAGCATAAAGCAAAG+GGG - chr1.3:9168331-9168350 None:intergenic 45.0%
ACTTAAAAGATGTGCTGGGC+TGG - chr1.3:9168202-9168221 None:intergenic 45.0%
AGCAAGAGCTTAGTTACCTG+GGG - chr1.3:9165670-9165689 None:intergenic 45.0%
AGCTGCACATGGTACAATCT+TGG - chr1.3:9167671-9167690 None:intergenic 45.0%
AGTCCTTTGCAATGGCAATG+AGG + chr1.3:9169653-9169672 MS.gene61684:CDS 45.0%
ATCCATATTGGACGGAGTTG+AGG - chr1.3:9167075-9167094 None:intergenic 45.0%
ATCCTCAACTCCGTCCAATA+TGG + chr1.3:9167070-9167089 MS.gene61684:CDS 45.0%
ATCTTGGGAGCAAATGCTTG+TGG - chr1.3:9167655-9167674 None:intergenic 45.0%
ATGGCCATTTGCATGCATCA+TGG + chr1.3:9166272-9166291 MS.gene61684:intron 45.0%
ATTGATGCCTGATCCTATCC+AGG + chr1.3:9165851-9165870 MS.gene61684:CDS 45.0%
ATTTGCCGGATATAGGTCGA+TGG - chr1.3:9167195-9167214 None:intergenic 45.0%
CAAATGCACCTGATAAGAGG+AGG + chr1.3:9167210-9167229 MS.gene61684:CDS 45.0%
CAAATTGTAGGCAGCGTCTA+CGG - chr1.3:9166809-9166828 None:intergenic 45.0%
CAGCAAGAGCTTAGTTACCT+GGG - chr1.3:9165671-9165690 None:intergenic 45.0%
CATGTAGGATGAGACTACAG+TGG + chr1.3:9166632-9166651 MS.gene61684:intron 45.0%
CCACCGTGAAACACAATACT+CGG + chr1.3:9165020-9165039 MS.gene61684:CDS 45.0%
CCAGTAGTTGAAGCACAACT+AGG - chr1.3:9166978-9166997 None:intergenic 45.0%
CCTAGTTGTGCTTCAACTAC+TGG + chr1.3:9166975-9166994 MS.gene61684:CDS 45.0%
CGATATTCGCCAGTTATCTG+GGG + chr1.3:9169335-9169354 MS.gene61684:CDS 45.0%
CTCTTATCAGGTGCATTTGC+CGG - chr1.3:9167209-9167228 None:intergenic 45.0%
CTGGCGAATATCGCATCTAT+TGG - chr1.3:9169328-9169347 None:intergenic 45.0%
GAACAATCTACTGATGCGGT+TGG + chr1.3:9165385-9165404 MS.gene61684:CDS 45.0%
GATATTCGCCAGTTATCTGG+GGG + chr1.3:9169336-9169355 MS.gene61684:CDS 45.0%
GCGATATTCGCCAGTTATCT+GGG + chr1.3:9169334-9169353 MS.gene61684:CDS 45.0%
GCTGCACATGGTACAATCTT+GGG - chr1.3:9167670-9167689 None:intergenic 45.0%
GCTGCCAGTAATAATCTCTG+CGG + chr1.3:9168342-9168361 MS.gene61684:intron 45.0%
GCTGTGTTCATGGACTTAAG+AGG + chr1.3:9164493-9164512 MS.gene61684:intron 45.0%
GGATACATTTGATCGTCCAC+GGG - chr1.3:9165349-9165368 None:intergenic 45.0%
GGCCAATCAGCACAAATGAA+AGG - chr1.3:9169115-9169134 None:intergenic 45.0%
GGGTATTCGCATCATTCTTG+AGG - chr1.3:9165282-9165301 None:intergenic 45.0%
GTAGACGCTGCCTACAATTT+GGG + chr1.3:9166808-9166827 MS.gene61684:CDS 45.0%
GTAGTTGAAGCACAACTAGG+TGG - chr1.3:9166975-9166994 None:intergenic 45.0%
GTATCCAGTCAACCCAGAAA+TGG + chr1.3:9165363-9165382 MS.gene61684:CDS 45.0%
GTCAAGAACCCCAATCAAAG+GGG - chr1.3:9163988-9164007 None:intergenic 45.0%
GTCTCCAATAAAGCCTGTCA+AGG + chr1.3:9164921-9164940 MS.gene61684:CDS 45.0%
GTGTCAAGAACCCCAATCAA+AGG - chr1.3:9163990-9164009 None:intergenic 45.0%
GTTATAAACACCTCTGGCAG+TGG - chr1.3:9165238-9165257 None:intergenic 45.0%
GTTGAATTCCTCAGCATCTG+TGG - chr1.3:9167243-9167262 None:intergenic 45.0%
TAAAAAACCACGCAGCAGTC+TGG + chr1.3:9169209-9169228 MS.gene61684:CDS 45.0%
TAGACGCTGCCTACAATTTG+GGG + chr1.3:9166809-9166828 MS.gene61684:CDS 45.0%
TATGCTACCCCCCTTTGATT+GGG + chr1.3:9163976-9163995 MS.gene61684:intron 45.0%
TATTCATCGACAGATGCTGG+AGG - chr1.3:9165316-9165335 None:intergenic 45.0%
TCAAGAACCCCAATCAAAGG+GGG - chr1.3:9163987-9164006 None:intergenic 45.0%
TCCAGGTAGAATGCTAGAGA+TGG + chr1.3:9168282-9168301 MS.gene61684:intron 45.0%
TCTAGCATTCTACCTGGACT+TGG - chr1.3:9168280-9168299 None:intergenic 45.0%
TGAATATTTGGCTGATCCCG+TGG + chr1.3:9165330-9165349 MS.gene61684:CDS 45.0%
TGAATTCCTCAGCATCTGTG+GGG - chr1.3:9167241-9167260 None:intergenic 45.0%
TGATCCTATCCAGGCTGTTA+AGG + chr1.3:9165860-9165879 MS.gene61684:CDS 45.0%
TGCAATGGCAATGAGGATTC+GGG + chr1.3:9169660-9169679 MS.gene61684:CDS 45.0%
TGCACCGCAGAGATTATTAC+TGG - chr1.3:9168349-9168368 None:intergenic 45.0%
TGCGATATTCGCCAGTTATC+TGG + chr1.3:9169333-9169352 MS.gene61684:CDS 45.0%
TTAACAGCCTGGATAGGATC+AGG - chr1.3:9165861-9165880 None:intergenic 45.0%
TTACCTGGGGAAGTGAATCA+TGG - chr1.3:9165657-9165676 None:intergenic 45.0%
TTATGCTACCCCCCTTTGAT+TGG + chr1.3:9163975-9163994 MS.gene61684:intron 45.0%
TTCTCCCCTTCAATTGTTGC+AGG - chr1.3:9165553-9165572 None:intergenic 45.0%
! CGAGTATTGTGTTTCACGGT+GGG - chr1.3:9165022-9165041 None:intergenic 45.0%
! GAAGCCTTGACAGGCTTTAT+TGG - chr1.3:9164928-9164947 None:intergenic 45.0%
! GAGTATTGTGTTTCACGGTG+GGG - chr1.3:9165021-9165040 None:intergenic 45.0%
! GTGGAGGAGAAACTCTCTTT+TGG - chr1.3:9169518-9169537 None:intergenic 45.0%
! TAATCTCTGCGGTGCACTTT+TGG + chr1.3:9168353-9168372 MS.gene61684:intron 45.0%
! TATCCCACAAGATGGTTCTG+AGG + chr1.3:9165935-9165954 MS.gene61684:CDS 45.0%
! TGTTCCATTTCTGGGTTGAC+TGG - chr1.3:9165370-9165389 None:intergenic 45.0%
! TTTTACGCACTTGTGCGTTG+TGG + chr1.3:9164516-9164535 MS.gene61684:intron 45.0%
!! ACAATGGTGTTACAGGTGAG+AGG - chr1.3:9169000-9169019 None:intergenic 45.0%
!! AGGACTTTAGAATCAGCGCA+AGG - chr1.3:9169639-9169658 None:intergenic 45.0%
!! ATCAGAAGGATTGGTGATGG+CGG - chr1.3:9163902-9163921 None:intergenic 45.0%
!! CAGGCTAGCCTAAAGTATCA+TGG + chr1.3:9166780-9166799 MS.gene61684:intron 45.0%
!! CTATTGGAGAGTTGGTATGG+TGG - chr1.3:9169312-9169331 None:intergenic 45.0%
!! GACTTTAGAATCAGCGCAAG+GGG - chr1.3:9169637-9169656 None:intergenic 45.0%
!! GCAAAGGGGTGTCATTTGTA+TGG - chr1.3:9168317-9168336 None:intergenic 45.0%
!! GGACTTTAGAATCAGCGCAA+GGG - chr1.3:9169638-9169657 None:intergenic 45.0%
!! TAGGGTTTGAGTTGAGGTTC+TGG - chr1.3:9168250-9168269 None:intergenic 45.0%
!! TTTGGTGCTGGAATCTTCTG+TGG + chr1.3:9167541-9167560 MS.gene61684:CDS 45.0%
!!! AACTTTTTCCTGGAGGTGCT+AGG - chr1.3:9167269-9167288 None:intergenic 45.0%
AAATGCAACCCAATGCCTGG+TGG - chr1.3:9166930-9166949 None:intergenic 50.0%
AAGGCTTCTCATGCGACACA+TGG + chr1.3:9164940-9164959 MS.gene61684:CDS 50.0%
ACATCCACATGAGGGAAGAG+TGG + chr1.3:9168789-9168808 MS.gene61684:intron 50.0%
ACTTGGGGGGATTCATCAGA+AGG - chr1.3:9163916-9163935 None:intergenic 50.0%
AGCATTCTACCTGGACTTGG+TGG - chr1.3:9168277-9168296 None:intergenic 50.0%
AGGCTTCTCATGCGACACAT+GGG + chr1.3:9164941-9164960 MS.gene61684:CDS 50.0%
AGTGGAACATCAGCTGCACA+TGG - chr1.3:9167682-9167701 None:intergenic 50.0%
ATGCTACCCCCCTTTGATTG+GGG + chr1.3:9163977-9163996 MS.gene61684:intron 50.0%
ATTGAGAGTTGAGGAGAGGG+AGG - chr1.3:9163872-9163891 None:intergenic 50.0%
ATTGGATCAAGCTCCTCAGG+TGG + chr1.3:9169555-9169574 MS.gene61684:CDS 50.0%
CAAGAACCCCAATCAAAGGG+GGG - chr1.3:9163986-9164005 None:intergenic 50.0%
CAGAGCCATCTACTTCGGAT+TGG + chr1.3:9169537-9169556 MS.gene61684:CDS 50.0%
CAGGTGCATTTGCCGGATAT+AGG - chr1.3:9167202-9167221 None:intergenic 50.0%
CATCCACATGAGGGAAGAGT+GGG + chr1.3:9168790-9168809 MS.gene61684:intron 50.0%
CATGCGACACATGGGTTTCT+CGG + chr1.3:9164949-9164968 MS.gene61684:CDS 50.0%
CCAGTCCGACAATGCACATA+CGG - chr1.3:9164696-9164715 None:intergenic 50.0%
CCATTTGCATGCATCATGGC+AGG + chr1.3:9166276-9166295 MS.gene61684:intron 50.0%
CCTGCCATGATGCATGCAAA+TGG - chr1.3:9166279-9166298 None:intergenic 50.0%
CGGCAAATGCACCTGATAAG+AGG + chr1.3:9167207-9167226 MS.gene61684:CDS 50.0%
CGTAGACGCTGCCTACAATT+TGG + chr1.3:9166807-9166826 MS.gene61684:CDS 50.0%
CTCCACAGAGCCATCTACTT+CGG + chr1.3:9169532-9169551 MS.gene61684:CDS 50.0%
GAAGCTGCTTCCGTTGTTCT+TGG + chr1.3:9166831-9166850 MS.gene61684:CDS 50.0%
GCATCAGCTAGGCACAAAAG+AGG + chr1.3:9167816-9167835 MS.gene61684:CDS 50.0%
GGAGACTTGAATACGAGAGG+TGG - chr1.3:9164985-9165004 None:intergenic 50.0%
GGGGGATTCATCAGAAGGAT+TGG - chr1.3:9163911-9163930 None:intergenic 50.0%
GTTGCACGTCTTAGGTCCAT+TGG - chr1.3:9167400-9167419 None:intergenic 50.0%
TCCTCAGGTGGCTTGAAAAG+TGG + chr1.3:9169567-9169586 MS.gene61684:CDS 50.0%
TCGACTGGATGTCGATGTGA+TGG + chr1.3:9167999-9168018 MS.gene61684:CDS 50.0%
TTGCCATGATTCACTTCCCC+AGG + chr1.3:9165651-9165670 MS.gene61684:CDS 50.0%
TTTCCAAGCCACCAGGCATT+GGG + chr1.3:9166919-9166938 MS.gene61684:CDS 50.0%
! ACAGGTGAGAGGTGATTTGC+TGG - chr1.3:9168989-9169008 None:intergenic 50.0%
! ATCCGAAGTAGATGGCTCTG+TGG - chr1.3:9169537-9169556 None:intergenic 50.0%
! CCGAGTATTGTGTTTCACGG+TGG - chr1.3:9165023-9165042 None:intergenic 50.0%
! CTTTTGTGCCTAGCTGATGC+CGG - chr1.3:9167816-9167835 None:intergenic 50.0%
! GGCATTGAGAGTTGAGGAGA+GGG - chr1.3:9163875-9163894 None:intergenic 50.0%
!! ATTCTACCTGGACTTGGTGG+TGG - chr1.3:9168274-9168293 None:intergenic 50.0%
!! GGTGCACTTTTGGAAGTGGT+GGG + chr1.3:9168363-9168382 MS.gene61684:intron 50.0%
!! TTCTACCTGGACTTGGTGGT+GGG - chr1.3:9168273-9168292 None:intergenic 50.0%
!!! TTTTCCTGGAGGTGCTAGGA+TGG - chr1.3:9167265-9167284 None:intergenic 50.0%
ACTTTGCACCCTGCTTGCCT+TGG - chr1.3:9169155-9169174 None:intergenic 55.0%
ATGCTGGAGGACTGCAGCTT+TGG - chr1.3:9165303-9165322 None:intergenic 55.0%
CAGGTGGCTTGAAAAGTGGC+AGG + chr1.3:9169571-9169590 MS.gene61684:CDS 55.0%
CCGTATGTGCATTGTCGGAC+TGG + chr1.3:9164693-9164712 MS.gene61684:intron 55.0%
CGCGGAGACTTGAATACGAG+AGG - chr1.3:9164988-9165007 None:intergenic 55.0%
GAAGAGAGCCCCCAGATAAC+TGG - chr1.3:9169347-9169366 None:intergenic 55.0%
GAATCAGCGCAAGGGGTCAA+CGG - chr1.3:9169630-9169649 None:intergenic 55.0%
GCTAACGTTGGATGCTCGAC+TGG + chr1.3:9167984-9168003 MS.gene61684:CDS 55.0%
GCTGGAATCTTCTGTGGCGA+CGG + chr1.3:9167547-9167566 MS.gene61684:CDS 55.0%
GTCGCATGAGAAGCCTTGAC+AGG - chr1.3:9164937-9164956 None:intergenic 55.0%
GTGACAGTTTCCAAGCCACC+AGG + chr1.3:9166912-9166931 MS.gene61684:CDS 55.0%
GTTTCCAAGCCACCAGGCAT+TGG + chr1.3:9166918-9166937 MS.gene61684:CDS 55.0%
TATCTGGGGGCTCTCTTCGT+TGG + chr1.3:9169349-9169368 MS.gene61684:CDS 55.0%
TCAACCATCCTAGCACCTCC+AGG + chr1.3:9167258-9167277 MS.gene61684:CDS 55.0%
TGACAACACCGGCATCAGCT+AGG + chr1.3:9167805-9167824 MS.gene61684:CDS 55.0%
TGCTGGAGGACTGCAGCTTT+GGG - chr1.3:9165302-9165321 None:intergenic 55.0%
TTGTCCAGCCAAGGCAAGCA+GGG + chr1.3:9169144-9169163 MS.gene61684:intron 55.0%
TTTGTCCAGCCAAGGCAAGC+AGG + chr1.3:9169143-9169162 MS.gene61684:intron 55.0%
! CGAAGTAGATGGCTCTGTGG+AGG - chr1.3:9169534-9169553 None:intergenic 55.0%
! CGGATTGGATCAAGCTCCTC+AGG + chr1.3:9169552-9169571 MS.gene61684:CDS 55.0%
! CGGCATTGAGAGTTGAGGAG+AGG - chr1.3:9163876-9163895 None:intergenic 55.0%
!! AGAAGGATTGGTGATGGCGG+TGG - chr1.3:9163899-9163918 None:intergenic 55.0%
!! CGGTGCACTTTTGGAAGTGG+TGG + chr1.3:9168362-9168381 MS.gene61684:intron 55.0%
!! CTGCGGTGCACTTTTGGAAG+TGG + chr1.3:9168359-9168378 MS.gene61684:intron 55.0%
!! GGTGGGTAGGGTTTGAGTTG+AGG - chr1.3:9168256-9168275 None:intergenic 55.0%
!!! GCCACTTTTCAAGCCACCTG+AGG - chr1.3:9169571-9169590 None:intergenic 55.0%
CAACCCAATGCCTGGTGGCT+TGG - chr1.3:9166925-9166944 None:intergenic 60.0%
GAATGTGCCAGACTGCTGCG+TGG - chr1.3:9169219-9169238 None:intergenic 60.0%
GCACCCACTCTTCCCTCATG+TGG - chr1.3:9168796-9168815 None:intergenic 60.0%
GGGCGTACCCTCCTCTTATC+AGG - chr1.3:9167221-9167240 None:intergenic 60.0%
GGTTGTGCTTGCGAAGGCTG+TGG + chr1.3:9167568-9167587 MS.gene61684:CDS 60.0%
TTCTCAGCAGCCACTGCCAG+AGG + chr1.3:9165225-9165244 MS.gene61684:CDS 60.0%
! GGTGGCGGCATTGAGAGTTG+AGG - chr1.3:9163881-9163900 None:intergenic 60.0%
!! ACCTGGACTTGGTGGTGGGT+AGG - chr1.3:9168269-9168288 None:intergenic 60.0%
!! AGGATTGGTGATGGCGGTGG+CGG - chr1.3:9163896-9163915 None:intergenic 60.0%
!! CCTGGACTTGGTGGTGGGTA+GGG - chr1.3:9168268-9168287 None:intergenic 60.0%
CCCTACCCACCACCAAGTCC+AGG + chr1.3:9168265-9168284 MS.gene61684:intron 65.0%
GGCGACGGTTGTGCTTGCGA+AGG + chr1.3:9167562-9167581 MS.gene61684:CDS 65.0%
GGGGTCAACGGCGGGAATGA+AGG - chr1.3:9169618-9169637 None:intergenic 65.0%
GGTACGCCCCACAGATGCTG+AGG + chr1.3:9167232-9167251 MS.gene61684:CDS 65.0%
TCAGCGCAAGGGGTCAACGG+CGG - chr1.3:9169627-9169646 None:intergenic 65.0%
TGCACCCTGCTTGCCTTGGC+TGG - chr1.3:9169151-9169170 None:intergenic 65.0%
!! CGGTGGGGAGCACTGATACG+CGG - chr1.3:9165006-9165025 None:intergenic 65.0%
CAGCGCAAGGGGTCAACGGC+GGG - chr1.3:9169626-9169645 None:intergenic 70.0%
GGGGGCTCTCTTCGTTGGCG+CGG + chr1.3:9169354-9169373 MS.gene61684:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 9163823 9169707 9163823 ID=MS.gene61684
chr1.3 mRNA 9163823 9169707 9163823 ID=MS.gene61684.t1;Parent=MS.gene61684
chr1.3 exon 9163823 9163939 9163823 ID=MS.gene61684.t1.exon1;Parent=MS.gene61684.t1
chr1.3 CDS 9163823 9163939 9163823 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9164889 9165046 9164889 ID=MS.gene61684.t1.exon2;Parent=MS.gene61684.t1
chr1.3 CDS 9164889 9165046 9164889 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9165129 9165672 9165129 ID=MS.gene61684.t1.exon3;Parent=MS.gene61684.t1
chr1.3 CDS 9165129 9165672 9165129 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9165807 9165956 9165807 ID=MS.gene61684.t1.exon4;Parent=MS.gene61684.t1
chr1.3 CDS 9165807 9165956 9165807 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9166783 9167285 9166783 ID=MS.gene61684.t1.exon5;Parent=MS.gene61684.t1
chr1.3 CDS 9166783 9167285 9166783 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9167374 9167445 9167374 ID=MS.gene61684.t1.exon6;Parent=MS.gene61684.t1
chr1.3 CDS 9167374 9167445 9167374 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9167528 9167711 9167528 ID=MS.gene61684.t1.exon7;Parent=MS.gene61684.t1
chr1.3 CDS 9167528 9167711 9167528 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9167792 9167890 9167792 ID=MS.gene61684.t1.exon8;Parent=MS.gene61684.t1
chr1.3 CDS 9167792 9167890 9167792 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9167984 9168050 9167984 ID=MS.gene61684.t1.exon9;Parent=MS.gene61684.t1
chr1.3 CDS 9167984 9168050 9167984 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9168864 9169032 9168864 ID=MS.gene61684.t1.exon10;Parent=MS.gene61684.t1
chr1.3 CDS 9168864 9169032 9168864 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
chr1.3 exon 9169152 9169707 9169152 ID=MS.gene61684.t1.exon11;Parent=MS.gene61684.t1
chr1.3 CDS 9169152 9169707 9169152 ID=cds.MS.gene61684.t1;Parent=MS.gene61684.t1
Gene Sequence

>MS.gene61684

ATGGATTCTCCAGAAGCTTCTCAGATTAAGAACATTTCTTCTTCTTCCTCCCTCTCCTCAACTCTCAATGCCGCCACCGCCATCACCAATCCTTCTGATGAATCCCCCCAAGTTCAAGTATACATCATTTCATTTTCATACCAATTAATTAATTATGCTACCCCCCTTTGATTGGGGTTCTTGACACGATTTTCGAGTTTAATTCTTCTTCTTTACGATTATTATGTTATGGAACTTAATCATGATACTATCAATGTTAACTCTGTCTGTCTTTATGTTTGGAATCTAATCTAATGAATTTATACCATTTTATTTCATTTATTGTGTTAGACATGTTTGGAATTACATTTGTTTTCGATGCCTACTTTTTGTTTCATTCCATTCATCAAACAACATTGTCTCTTCTTTTTTTGCATCAAAATGAATATAAGGTTATCAATTAGATCGGTTGATTCTTAGATCCTTAGACCGGATACTGAGTTTTCACAAGAAAATAAAAAAAGGTTATCTATTAAGTAAGTTTTAATCAATGTTGTCCGTCGTGGATTGCGAAAAATAGCATTTTGTTCAAATTCTACTATGTTACGGCGCCGTTATTTGACATTGCATTGTACTGAATACCATATCTCTGGAACAATATTCTGCTACACTATAGCCACTATTTGACAGTGCTGTGTTCATGGACTTAAGAGGTTTTACGCACTTGTGCGTTGTGGTGCCGCACTTTGATAATTGACTGTTGTGAGAGACTTGTTTGGAATTATATTTGTTTGATTGGATAAAATTCACTAGACTTGCTTTTGGTCTATCCTCTCTTATGTTAATTAACCCACACCGTCTCATTTTTGCATTAAAATGCTTATCAATTAGCCGTATGTGCATTGTCGGACTGGTATCTTGTGTTGATTGTGTTTCTAGAACCGTCTTTTTTGTTTAGAGATGTCTAGACTAGAGAGTAGTGTATTATTTTTGTTGACTTGTGTAGTATTTTTCAGACTCTTTCATTTCATTTCTAGTATCACAAAAAAGGAATGAAATTTACATCTTGTCGTCTTCTTCATTTCAGGAATCTCCCTTTTTGAGATTTGTCAACACTCTGTCTCCAATAAAGCCTGTCAAGGCTTCTCATGCGACACATGGGTTTCTCGGACTCAATTCTCCACCTCTCGTATTCAAGTCTCCGCGTATCAGTGCTCCCCACCGTGAAACACAATACTCGGAAAGGTTTGTGACTTCAATTTTGTGTTCGTGTCTTTTGTTATTGACGATGCACTCGCTATTTATTGACAAAATTTGTATGTATCAGGCTTGAAGGTACCCATTTATCAGATACAGAAACATCTCAAAGTAACGTAGGAGACAACAGTCTTGGTGAAGCTCGTAGTGATTTGAAGAAATTGAATTCTCAGCAGCCACTGCCAGAGGTGTTTATAACAGTTGCTCAAAAGGATTTTGACCTCAAGAATGATGCGAATACCCAAAGCTGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGACGATCAAATGTATCCAGTCAACCCAGAAATGGAACAATCTACTGATGCGGTTGGGTCATCATCACTAACTGAGTCGGAGAAAGTTATATTAAAATTTGATAGGAGTGACGGTCCTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAACATATGTTGAAAATCCTGCAACAATTGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGCCATGATTCACTTCCCCAGGTAACTAAGCTCTTGCTGTCTATACTCTATATTTATAATGCTGATATAGGGACGTCAGTTTTCATATATATGATTAGTGTGAGCTAGATGTCCTCTAGTCTCTTTTGATTGATCTATAAAATTTCAAGCTTCAGTGTGCAGGAAATGATCAACAGCATCAAAGTCACTGTGCACCTCAATTGATGCCTGATCCTATCCAGGCTGTTAAGGAATTTGAAAATTGCAGTGAGATGGTGTCATCCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGTTCTGAGGTAATTGATTTTTTTTCTTTCAGGTTTATTGCATTCCTCTGATGAATATATGAACTTTTGTTTAGATTTTGCTGTCTTTTCATGCTTTCCCTCCTCTCTGAATGATTTTGTTTATGTCTGTGTTCTTTTAGTCTTTAACACTAAATACTAGTCTCTTTAGAGGTTAATGACTCCAGGCTTGAATACACTTTTATTTTTTTTAATCATTGGCATCTACTATCTCCAATTAAAGAAGAGCACAGTACATGTATTTTGTTTGCACTTGGCACATTCAATCTTATAAATCTAATAATGCTTCATTGATCTAGTTTGTTTATGGCCATTTGCATGCATCATGGCAGGATTTTTTTAACGAAATTAGCAGAAGTGGTATACTGCATATTTCTGCATAAGATAGGTGCTGTAATCAGATTTCTCTAACTGAAAAATCCCCCCATTTTTCTGCTTATCAAGTTTTGCTTTGTTTGGAGGTTTCAAAATTGTGGATCTCTGATAAATACAGTTTTTTCAACAAGATTGCTAATAAAATGCGAGTCCTGATATTACATCATGGACTCAAGGTTAAGGGCATCTCTTAGAATAAGGAAGTCAGTCTTCTGTTTATGAATATATAGCATGAAATATCTTTTGAACAAAGAAAAGTCAGCAATAATTTATTGGCTACAAGGTTTTAGTCATGTAGGATGAGACTACAGTGGTGTAATGGCATTATCTACTTGGCAATCATACACAGAGTTGCATTTTGATTATCAGGAACTTGCATTTTATTGTTCAATTAAATGAAGATTTTCTGTCTGCAATATAATAATTGTTACAGTCAATGCAGGCTAGCCTAAAGTATCATGGCATCCGTAGACGCTGCCTACAATTTGGGGAAGCTGCTTCCGTTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAACGCAAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACTGGTGTGAGATTATCAGATGGTATACAGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGTGGCAAGATCCTCAACTCCGTCCAATATGGATGATCAATCTTTTATTGATACTAAGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTACGCCCCACAGATGCTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGTTAGTTATCATGATCTTTCTCATAGGTCATTATTTTTATTCTTTACCTGTTTGCTAGTTTTACCAAATATTGCATTGCTCTATATAGGAAGAAAACAAGTACTGATGATGCCAATGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTGTGAGTATATTTTAAATATGTTTTGATACCATACTTTCTATGATATGCAATATCTATGTATTTTGATTTGAGTACTTTGCAGTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGTGGTAACAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAGCAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACTGAATAATATGGTATAAGATCTTCATATATTACTGTTGTTCAACCTGCTAGCCTTAAAAAATTAGGTGATATTTTGATGCGACCTTTGCAGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGTGAATGTTTTCAGGTTGTGTATTTTATCCATATTTCTATATGCTCTAAATATTTTTACTGTGTCTGCTAATATATTTTTTATTTTATTTTAAATATTTGTCAAAAGGCTAACGTTGGATGCTCGACTGGATGTCGATGTGATGGATGTATGAATGTCTTTGGCAAGAGAGAAGGTTAGAGCTCATAGTATGAATAGCTATTTTAAATACTTAATGCACTACACAGTTTAACTTGTTGTCTGGTCAGTATAAATGTTATGGATTGATGTTGGGAGGTTTTGATGTTTCCAAATACTAGTCCTTATAAGGAAAATTGTTGAGGCCAGCCCAGCACATCTTTTAAGTTTTTTAATGATGTGTAGATTTGAATCCAGAACCTCAACTCAAACCCTACCCACCACCAAGTCCAGGTAGAATGCTAGAGATGGTCATATTTGCCATACAAATGACACCCCTTTGCTTTATGCTGCCAGTAATAATCTCTGCGGTGCACTTTTGGAAGTGGTGGGTTTGTTTTTAAAGAAGTATTAGGTCTCGCGAACTTATGAATTGAATCAATTACGATTAAATAACTTTTTAGTGTTTCTAATGTACACTATTCCCAATTTAGTTTCTAAAATTTCTAGTTGATTTCAATCCCTGAAATACAATAACATAATTTTTGGTACTTCTTTTGGTTTGAGTTCTTGTAACTTTGTCCACATTAAAATGAATACATATGGTCCACATGTTATAGGAATTTATTTCAGTATGGACAAATATTTTGAAAAACTAAATTAAAAGAATGAAAATCAAAAGCAATTTTTCTTAAATTTTAGGGGTTCAAACTGGCTAGAATTTCTTGAGAGACTAAACTGAAAGTTGGTGTGAATTACAGAGACTAGAATTATTTTAGCTTTTAAAGTATAGTTGACATCCACATGAGGGAAGAGTGGGTGCAGATCATTAAATGATTCTGTTAATGTATTACACATTTTTTAAATGCAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAACATTGTTGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGAGTAAGATTGCTTACACTGCAAGTTTTTCTATGTTGTATAAATAAGAAGTTATATTCTGAGTATTTAATTATTTTGACGTCCTTTCATTTGTGCTGATTGGCCTTTTTGCATTTGTCCAGCCAAGGCAAGCAGGGTGCAAAGTCTAGACATACTTCTGCAAATTTGACCAAATCTTCTAAAAAACCACGCAGCAGTCTGGCACATTCGAAGTCGAATGATTCTCAAAAGAATGCACCTACACGTTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAACTCTCCAATAGATGCGATATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCTAACTTAGATGATGAATCAGATGGTAAGCTCTTTGACATTATAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAGAGCCATCTACTTCGGATTGGATCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCGCCGTTGACCCCTTGCGCTGATTCTAAAGTCCTTTGCAATGGCAATGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA
Protein sequence

>MS.gene61684.t1

MDSPEASQIKNISSSSSLSSTLNAATAITNPSDESPQVQESPFLRFVNTLSPIKPVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQSNVGDNSLGEARSDLKKLNSQQPLPEVFITVAQKDFDLKNDANTQSCSPPASVDEYLADPVDDQMYPVNPEMEQSTDAVGSSSLTESEKVILKFDRSDGPSNIAEELLPLLEESNMVHQERTTYVENPATIEGEKNGAELVSQEHINLGSSSGADVFDKQYCHDSLPQCAGNDQQHQSHCAPQLMPDPIQAVKEFENCSEMVSSSQVNSENIPQDGSEASLKYHGIRRRCLQFGEAASVVLGSNKSHVKLNTTSSNAKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVRLSDGIQGSKSSISLHIVENVARSSTPSNMDDQSFIDTKNESHETDASVVADSFISESPILTESIDLYPANAPDKRRVRPTDAEEFNHPSTSRKKKKTSTDDANGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPLNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNVFGKREDFVAMEHASSNERESNIVEEGLDDKLHKRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHTSANLTKSSKKPRSSLAHSKSNDSQKNAPTRSSSTENEWIDLPPYQLSNRCDIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDIIEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGNEDSGNSTDKVT