Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66885.t1 | XP_013442522.1 | 97.5 | 318 | 7 | 1 | 1 | 318 | 2 | 318 | 1.00E-172 | 615.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66885.t1 | Q94F00 | 82.1 | 274 | 49 | 0 | 45 | 318 | 66 | 339 | 9.0e-133 | 474.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66885.t1 | A0A072TGR0 | 97.5 | 318 | 7 | 1 | 1 | 318 | 2 | 318 | 7.5e-173 | 615.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049427 | MS.gene66885 | 0.814811 | 1.27E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene66885 | 0.810311 | 1.23E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene66885 | 0.819611 | 1.06E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene66885 | 0.812404 | 4.31E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene66885 | 0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene66885 | 0.811095 | 8.31E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene66885 | 0.812813 | 3.51E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene66885 | 0.831296 | 1.81E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene66885 | 0.84358 | 1.28E-58 | -1.69E-46 |
| MS.gene051387 | MS.gene66885 | 0.825735 | 3.99E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene66885 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene66885 | 0.804981 | 1.66E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene66885 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene052508 | MS.gene66885 | 0.805866 | 1.09E-49 | -1.69E-46 |
| MS.gene052510 | MS.gene66885 | 0.82218 | 2.72E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene66885 | 0.866812 | 2.17E-65 | -1.69E-46 |
| MS.gene053207 | MS.gene66885 | 0.841305 | 5.15E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene66885 | 0.828119 | 1.07E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene66885 | 0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene66885 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene66885 | 0.812459 | 4.19E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene66885 | 0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene66885 | 0.826599 | 2.48E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene66885 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene66885 | 0.805047 | 1.61E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene66885 | 0.807859 | 4.11E-50 | -1.69E-46 |
| MS.gene055397 | MS.gene66885 | 0.81792 | 2.57E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene66885 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene66885 | 0.824744 | 6.84E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene66885 | 0.825781 | 3.89E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene66885 | 0.839215 | 1.81E-57 | -1.69E-46 |
| MS.gene05602 | MS.gene66885 | 0.81022 | 1.28E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene66885 | 0.823982 | 1.03E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene66885 | 0.824685 | 7.06E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene66885 | 0.833016 | 6.79E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene66885 | 0.807585 | 4.71E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene66885 | 0.80106 | 1.08E-48 | -1.69E-46 |
| MS.gene05666 | MS.gene66885 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene66885 | 0.816999 | 4.14E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene66885 | 0.810588 | 1.07E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene66885 | 0.857349 | 1.73E-62 | -1.69E-46 |
| MS.gene057416 | MS.gene66885 | 0.83476 | 2.49E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene66885 | 0.805171 | 1.52E-49 | -1.69E-46 |
| MS.gene058082 | MS.gene66885 | 0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene66885 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene66885 | 0.825784 | 3.88E-54 | -1.69E-46 |
| MS.gene058993 | MS.gene66885 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene66885 | 0.812502 | 4.11E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene66885 | 0.82571 | 4.04E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene66885 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene66885 | 0.82308 | 1.68E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene66885 | 0.812452 | 4.21E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene66885 | 0.809635 | 1.72E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene66885 | 0.819917 | 9.03E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene66885 | 0.812927 | 3.31E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene66885 | 0.805493 | 1.30E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene66885 | 0.825302 | 5.05E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene66885 | 0.840363 | 9.10E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene66885 | 0.80374 | 3.02E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene66885 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene66885 | 0.848492 | 5.92E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66885.t1 | MTR_0151s0030 | 97.484 | 318 | 7 | 1 | 1 | 318 | 2 | 318 | 0.0 | 637 |
| MS.gene66885.t1 | MTR_2g026060 | 35.156 | 256 | 153 | 6 | 66 | 315 | 11 | 259 | 1.56e-39 | 140 |
| MS.gene66885.t1 | MTR_3g117220 | 25.490 | 255 | 170 | 6 | 53 | 301 | 53 | 293 | 7.47e-16 | 77.4 |
| MS.gene66885.t1 | MTR_3g117220 | 25.581 | 258 | 166 | 7 | 53 | 301 | 53 | 293 | 8.41e-16 | 77.0 |
| MS.gene66885.t1 | MTR_3g117220 | 31.746 | 126 | 84 | 2 | 53 | 176 | 53 | 178 | 7.09e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66885.t1 | AT1G31190 | 82.117 | 274 | 49 | 0 | 45 | 318 | 66 | 339 | 3.90e-174 | 487 |
| MS.gene66885.t1 | AT3G02870 | 35.685 | 241 | 142 | 6 | 78 | 312 | 22 | 255 | 7.37e-39 | 138 |
| MS.gene66885.t1 | AT3G02870 | 35.685 | 241 | 142 | 6 | 78 | 312 | 19 | 252 | 8.45e-39 | 138 |
| MS.gene66885.t1 | AT3G02870 | 34.855 | 241 | 142 | 7 | 78 | 312 | 22 | 253 | 1.11e-35 | 130 |
| MS.gene66885.t1 | AT4G39120 | 28.390 | 236 | 154 | 5 | 69 | 301 | 89 | 312 | 2.11e-20 | 90.5 |
| MS.gene66885.t1 | AT4G39120 | 28.390 | 236 | 154 | 5 | 69 | 301 | 118 | 341 | 2.85e-20 | 90.5 |
Find 83 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGGAATTGTAGAAGCTTAT+TGG | 0.200657 | 2.3:+38018527 | MS.gene66885:CDS |
| TCTCTTCTAGTGACAGGTTT+TGG | 0.218112 | 2.3:+38018310 | MS.gene66885:CDS |
| AGAATTATTCAAAGAATTTA+CGG | 0.259184 | 2.3:+38018366 | MS.gene66885:CDS |
| TTTGAAGATCATCTTATTCT+TGG | 0.263391 | 2.3:+38015787 | MS.gene66885:CDS |
| GGGGAAGAAGGAGGCATTAT+AGG | 0.301861 | 2.3:+38015808 | MS.gene66885:CDS |
| CCAAGGGATATTACGTATAA+AGG | 0.307417 | 2.3:+38015575 | MS.gene66885:CDS |
| GGGAATTGTAGAAGCTTATT+GGG | 0.311951 | 2.3:+38018528 | MS.gene66885:CDS |
| GGATATGGCTGCTGGTGTTT+TGG | 0.334606 | 2.3:+38018570 | MS.gene66885:CDS |
| TTGAAGATCATCTTATTCTT+GGG | 0.339310 | 2.3:+38015788 | MS.gene66885:CDS |
| GGACATGTGTCATGTGGCTT+TGG | 0.346148 | 2.3:+38018507 | MS.gene66885:CDS |
| CCCAGCTTTGCTGTTTCTGT+TGG | 0.353190 | 2.3:+38016431 | MS.gene66885:CDS |
| TTGCACTCACTTCGATCCTT+TGG | 0.364627 | 2.3:-38018148 | None:intergenic |
| TCGTCTAAAGCCATGGGATA+TGG | 0.366268 | 2.3:+38018555 | MS.gene66885:CDS |
| TAATTTCAGGTTGAGTTTGT+TGG | 0.386912 | 2.3:+38017917 | MS.gene66885:intron |
| GACATGTGTCATGTGGCTTT+GGG | 0.387052 | 2.3:+38018508 | MS.gene66885:CDS |
| CGAAGTGAGTGCAACTAATC+AGG | 0.390231 | 2.3:+38018157 | MS.gene66885:CDS |
| CTCTGGTGCATTGATCCCTT+AGG | 0.393019 | 2.3:+38015850 | MS.gene66885:CDS |
| TCCAACAGAAACAGCAAAGC+TGG | 0.410104 | 2.3:-38016432 | None:intergenic |
| TTCGAGAGGTTTGACTTTGA+AGG | 0.411142 | 2.3:-38014591 | None:intergenic |
| CATCTTATTCTTGGGGAAGA+AGG | 0.419054 | 2.3:+38015796 | MS.gene66885:CDS |
| GGTATGAACACGATGAAGCC+TGG | 0.422749 | 2.3:+38018332 | MS.gene66885:CDS |
| CTGAAGAACAACTCTATTCA+AGG | 0.428697 | 2.3:+38014662 | MS.gene66885:CDS |
| AGGGTTGGTGCACGCTCCAC+TGG | 0.434921 | 2.3:+38014682 | MS.gene66885:CDS |
| AAGAATTTACGGATGTCAGC+AGG | 0.448133 | 2.3:+38018377 | MS.gene66885:CDS |
| CCTTTATACGTAATATCCCT+TGG | 0.454380 | 2.3:-38015575 | None:intergenic |
| AAAGTCAAACCTCTCGAAGT+TGG | 0.465088 | 2.3:+38014596 | MS.gene66885:CDS |
| AGGAGGATCGCAGGTTGAAC+GGG | 0.469988 | 2.3:-38014706 | None:intergenic |
| TAATTCTATGTTAGTAGCCC+AGG | 0.475569 | 2.3:-38018350 | None:intergenic |
| ATCAATGCACCAGAGATAAT+CGG | 0.477276 | 2.3:-38015842 | None:intergenic |
| TTTCAGGTTGAGTTTGTTGG+TGG | 0.480206 | 2.3:+38017920 | MS.gene66885:intron |
| CAGCAGTTGTGGCAACTTGA+AGG | 0.490897 | 2.3:-38014726 | None:intergenic |
| ATGTAGCTTCCGATTATCTC+TGG | 0.495237 | 2.3:+38015833 | MS.gene66885:CDS |
| GGCACAGTCTCTCGGATGGA+TGG | 0.502346 | 2.3:+38019156 | MS.gene66885:CDS |
| GGGAATATCGTCTAAAGCCA+TGG | 0.516658 | 2.3:+38018548 | MS.gene66885:CDS |
| GCCACAACTGCTGCTCAGAC+TGG | 0.519271 | 2.3:+38014736 | MS.gene66885:CDS |
| AAGCTGGTGGCACAGTCTCT+CGG | 0.522324 | 2.3:+38019148 | MS.gene66885:CDS |
| TTGTTGGTGGTCCTATGTGT+TGG | 0.522702 | 2.3:+38017933 | MS.gene66885:CDS |
| ACCAGTCTGAGCAGCAGTTG+TGG | 0.522983 | 2.3:-38014737 | None:intergenic |
| GAGCATTCTGCAACGGCCAA+AGG | 0.523515 | 2.3:+38018132 | MS.gene66885:CDS |
| CGCAGGTTGAACGGGTCCAG+TGG | 0.525286 | 2.3:-38014698 | None:intergenic |
| TTATAGATGGTAGAGGAAGC+TGG | 0.525422 | 2.3:+38019132 | MS.gene66885:intron |
| TGCTGCTCAGACTGGTGCCA+AGG | 0.529716 | 2.3:+38014744 | MS.gene66885:CDS |
| GTCAAACCTCTCGAAGTTGG+AGG | 0.534251 | 2.3:+38014599 | MS.gene66885:CDS |
| CATTAATTTATAGATGGTAG+AGG | 0.538600 | 2.3:+38019125 | MS.gene66885:intron |
| AAGGAGGATCGCAGGTTGAA+CGG | 0.541106 | 2.3:-38014707 | None:intergenic |
| AAATCCTACTGCTGCTACAG+TGG | 0.541368 | 2.3:+38016469 | MS.gene66885:CDS |
| GAACGATCTCTTCTAGTGAC+AGG | 0.541726 | 2.3:+38018304 | MS.gene66885:CDS |
| AAGCCATGGGATATGGCTGC+TGG | 0.542409 | 2.3:+38018562 | MS.gene66885:CDS |
| CTTTGAAGGCGGTAAGTGGT+AGG | 0.550640 | 2.3:-38014577 | None:intergenic |
| ACGGCTTGGTGCAGCTGCTG+TGG | 0.552919 | 2.3:+38018486 | MS.gene66885:CDS |
| TTGACTTTGAAGGCGGTAAG+TGG | 0.564287 | 2.3:-38014581 | None:intergenic |
| GAACAACTCTATTCAAGGGT+TGG | 0.568420 | 2.3:+38014667 | MS.gene66885:CDS |
| TGAAGATCATCTTATTCTTG+GGG | 0.571098 | 2.3:+38015789 | MS.gene66885:CDS |
| ATCAGAGACTAACCTTAGCA+TGG | 0.571478 | 2.3:-38019230 | None:intergenic |
| CGAAGCTGCAATATTAGAAG+TGG | 0.573792 | 2.3:+38015753 | MS.gene66885:CDS |
| TGGTTATATACAGGTTGTGA+TGG | 0.576021 | 2.3:+38015538 | MS.gene66885:intron |
| GCTTAGGGTGTAAGACGGCT+TGG | 0.577813 | 2.3:+38018472 | MS.gene66885:intron |
| TGCTGTGGACATGTGTCATG+TGG | 0.577937 | 2.3:+38018501 | MS.gene66885:CDS |
| CTTATTCTTGGGGAAGAAGG+AGG | 0.578094 | 2.3:+38015799 | MS.gene66885:CDS |
| TTGATGCTTAGGGTGTAAGA+CGG | 0.578406 | 2.3:+38018467 | MS.gene66885:intron |
| GCAACTTGAAGGAGGATCGC+AGG | 0.586001 | 2.3:-38014715 | None:intergenic |
| GTATAAAGGATTAACTGACT+TGG | 0.588684 | 2.3:+38015589 | MS.gene66885:CDS |
| AAACGGCGTGATCCATGCTA+AGG | 0.590514 | 2.3:+38019218 | MS.gene66885:CDS |
| GTATGAACACGATGAAGCCT+GGG | 0.594244 | 2.3:+38018333 | MS.gene66885:CDS |
| GGAATATCGTCTAAAGCCAT+GGG | 0.599869 | 2.3:+38018549 | MS.gene66885:CDS |
| CCAACAGAAACAGCAAAGCT+GGG | 0.601113 | 2.3:-38016431 | None:intergenic |
| TGAAGAACAACTCTATTCAA+GGG | 0.603323 | 2.3:+38014663 | MS.gene66885:CDS |
| TGGATGCTGTTAATAAGCCA+AGG | 0.604018 | 2.3:+38015558 | MS.gene66885:CDS |
| GGTGGTGGAGCATTCTGCAA+CGG | 0.608637 | 2.3:+38018125 | MS.gene66885:intron |
| TCTGTTGGAGTTCTATATCG+AGG | 0.608905 | 2.3:+38016446 | MS.gene66885:CDS |
| AGAATTTACGGATGTCAGCA+GGG | 0.621463 | 2.3:+38018378 | MS.gene66885:CDS |
| TGGTGGCACAGTCTCTCGGA+TGG | 0.621555 | 2.3:+38019152 | MS.gene66885:CDS |
| TGAAGGCGGTAAGTGGTAGG+AGG | 0.632544 | 2.3:-38014574 | None:intergenic |
| TTTCAGCCTCCAACTTCGAG+AGG | 0.634852 | 2.3:-38014605 | None:intergenic |
| GAGAGGTTTGACTTTGAAGG+CGG | 0.636640 | 2.3:-38014588 | None:intergenic |
| ATCACCACTGTAGCAGCAGT+AGG | 0.645561 | 2.3:-38016473 | None:intergenic |
| ACACCAGCAGCCATATCCCA+TGG | 0.649403 | 2.3:-38018565 | None:intergenic |
| GGATGCTGTTAATAAGCCAA+GGG | 0.650904 | 2.3:+38015559 | MS.gene66885:CDS |
| ACAGTCTCTCGGATGGATGG+CGG | 0.651173 | 2.3:+38019159 | MS.gene66885:CDS |
| CAGTTGTGGCAACTTGAAGG+AGG | 0.652821 | 2.3:-38014723 | None:intergenic |
| GGGACAACAAACTTTGCACA+TGG | 0.671367 | 2.3:+38016404 | MS.gene66885:CDS |
| ATGCGAGTATTCCAACACAT+AGG | 0.693784 | 2.3:-38017944 | None:intergenic |
| TAGATGGTAGAGGAAGCTGG+TGG | 0.772384 | 2.3:+38019135 | MS.gene66885:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAACATATATGTAA+CGG | + | chr2.3:38015281-38015300 | MS.gene66885:intron | 10.0% |
| !!! | AATTTTTTTTTTTCAAATAG+TGG | - | chr2.3:38017104-38017123 | None:intergenic | 10.0% |
| !!! | ATATTCATTTTAGTATAAAT+AGG | - | chr2.3:38017612-38017631 | None:intergenic | 10.0% |
| !! | AAAAATTAATGACTGATATA+AGG | - | chr2.3:38016671-38016690 | None:intergenic | 15.0% |
| !! | AAAGCAAAAAACAATTATTT+AGG | - | chr2.3:38014929-38014948 | None:intergenic | 15.0% |
| !! | ACTAGAAGAAATAAAAATAA+TGG | + | chr2.3:38018877-38018896 | MS.gene66885:intron | 15.0% |
| !! | AGAATTATTCAAAGAATTTA+CGG | + | chr2.3:38018366-38018385 | MS.gene66885:CDS | 15.0% |
| !! | AGTTCTATTATTAATAGAAT+TGG | - | chr2.3:38018805-38018824 | None:intergenic | 15.0% |
| !! | ATAAATTATTTCAATACAGA+CGG | - | chr2.3:38016300-38016319 | None:intergenic | 15.0% |
| !! | CATGTTATATTTGAAAAATT+TGG | + | chr2.3:38017724-38017743 | MS.gene66885:intron | 15.0% |
| !! | GTTCTATTATTAATAGAATT+GGG | - | chr2.3:38018804-38018823 | None:intergenic | 15.0% |
| !! | TGAAATATAAGTAAAAGATA+CGG | - | chr2.3:38016506-38016525 | None:intergenic | 15.0% |
| !!! | AAGAACTTATTTTTGTATAA+TGG | + | chr2.3:38018698-38018717 | MS.gene66885:intron | 15.0% |
| !!! | AATAATTTTTAGTTTCTCTA+AGG | - | chr2.3:38018021-38018040 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTAAAATGTTG+GGG | - | chr2.3:38015905-38015924 | None:intergenic | 15.0% |
| !!! | AGAATTATTTCTTAAAATGT+TGG | - | chr2.3:38015907-38015926 | None:intergenic | 15.0% |
| !!! | ATAATTTTTAGTTTCTCTAA+GGG | - | chr2.3:38018020-38018039 | None:intergenic | 15.0% |
| !!! | GAATTATTTCTTAAAATGTT+GGG | - | chr2.3:38015906-38015925 | None:intergenic | 15.0% |
| !!! | TATTTTTATTTCTTCTAGTT+AGG | - | chr2.3:38018876-38018895 | None:intergenic | 15.0% |
| !!! | TCAGTGTTTTTTATTTTTTT+GGG | + | chr2.3:38018247-38018266 | MS.gene66885:intron | 15.0% |
| !!! | TTATTAGTTTTATCAATAAC+TGG | + | chr2.3:38018066-38018085 | MS.gene66885:intron | 15.0% |
| !!! | TTCAGTGTTTTTTATTTTTT+TGG | + | chr2.3:38018246-38018265 | MS.gene66885:intron | 15.0% |
| !!! | TTTTTCCATTAATTTATAGA+TGG | + | chr2.3:38019119-38019138 | MS.gene66885:intron | 15.0% |
| !! | AATGAGTTATTATCAATGAA+AGG | - | chr2.3:38016544-38016563 | None:intergenic | 20.0% |
| !! | ATAGGATTTGTATTAATTTC+AGG | + | chr2.3:38017904-38017923 | MS.gene66885:intron | 20.0% |
| !! | ATTATCAACAATTACTCTTA+AGG | + | chr2.3:38018603-38018622 | MS.gene66885:intron | 20.0% |
| !! | TACCATTATATACAATGAAA+AGG | - | chr2.3:38017850-38017869 | None:intergenic | 20.0% |
| !! | TCAATTACATAATCAAAACT+TGG | + | chr2.3:38017203-38017222 | MS.gene66885:intron | 20.0% |
| !! | TCTATTAATAATAGAACTAC+TGG | + | chr2.3:38018807-38018826 | MS.gene66885:intron | 20.0% |
| !! | TGTCAAAGCATAAATTAAAT+AGG | - | chr2.3:38015503-38015522 | None:intergenic | 20.0% |
| !! | TTCTTGACAATAAAAAATGA+GGG | - | chr2.3:38017810-38017829 | None:intergenic | 20.0% |
| !! | TTTCTTGACAATAAAAAATG+AGG | - | chr2.3:38017811-38017830 | None:intergenic | 20.0% |
| !!! | AAAAGCATATTTACACAATT+TGG | + | chr2.3:38017539-38017558 | MS.gene66885:intron | 20.0% |
| !!! | AATGAAAATGAATAGTTTTG+GGG | + | chr2.3:38017383-38017402 | MS.gene66885:intron | 20.0% |
| !!! | ACAATGAAAATGAATAGTTT+TGG | + | chr2.3:38017381-38017400 | MS.gene66885:intron | 20.0% |
| !!! | AGTGTTTTTTATTTTTTTGG+GGG | + | chr2.3:38018249-38018268 | MS.gene66885:intron | 20.0% |
| !!! | ATAGTTTTTCAAAACACTTT+AGG | - | chr2.3:38017454-38017473 | None:intergenic | 20.0% |
| !!! | CAATGAAAATGAATAGTTTT+GGG | + | chr2.3:38017382-38017401 | MS.gene66885:intron | 20.0% |
| !!! | CAGTGTTTTTTATTTTTTTG+GGG | + | chr2.3:38018248-38018267 | MS.gene66885:intron | 20.0% |
| !!! | GGAAAAGTAAATTTTTCTAA+TGG | + | chr2.3:38018665-38018684 | MS.gene66885:intron | 20.0% |
| !!! | TAATTTTTAGTTTCTCTAAG+GGG | - | chr2.3:38018019-38018038 | None:intergenic | 20.0% |
| !!! | TAGTTTTTCAAAACACTTTA+GGG | - | chr2.3:38017453-38017472 | None:intergenic | 20.0% |
| !!! | TCTTGTATAATTTTGTAGAT+GGG | + | chr2.3:38016384-38016403 | MS.gene66885:intron | 20.0% |
| !!! | TGAATTTTCAAAATGATCAA+AGG | + | chr2.3:38017751-38017770 | MS.gene66885:intron | 20.0% |
| !!! | TGATGTTAAATTTCAAGTTA+AGG | - | chr2.3:38016573-38016592 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCATTGTATATAA+TGG | + | chr2.3:38017845-38017864 | MS.gene66885:intron | 20.0% |
| ! | AAAAAATATGAAACGAACCT+TGG | - | chr2.3:38014764-38014783 | None:intergenic | 25.0% |
| ! | AAGAGGTTTATTAGGAAATT+AGG | + | chr2.3:38018777-38018796 | MS.gene66885:intron | 25.0% |
| ! | AAGGTATGAGAATTATATCA+GGG | - | chr2.3:38018102-38018121 | None:intergenic | 25.0% |
| ! | AATGGTAGATAATGATAGTT+GGG | + | chr2.3:38017863-38017882 | MS.gene66885:intron | 25.0% |
| ! | ACAAGTTTACTATGTTCTTA+CGG | - | chr2.3:38019008-38019027 | None:intergenic | 25.0% |
| ! | ACAATGAAACATAAAGTCTA+GGG | + | chr2.3:38017689-38017708 | MS.gene66885:intron | 25.0% |
| ! | AGAGTCATTTGTAAATTAAC+AGG | + | chr2.3:38015716-38015735 | MS.gene66885:intron | 25.0% |
| ! | ATATAATTCTCATACCTTGT+AGG | + | chr2.3:38018104-38018123 | MS.gene66885:intron | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+TGG | - | chr2.3:38015056-38015075 | None:intergenic | 25.0% |
| ! | ATCAAAGTCAAGAAAATGAT+TGG | - | chr2.3:38018452-38018471 | None:intergenic | 25.0% |
| ! | ATTAATGACTGATATAAGGT+TGG | - | chr2.3:38016667-38016686 | None:intergenic | 25.0% |
| ! | CATTAATTTATAGATGGTAG+AGG | + | chr2.3:38019125-38019144 | MS.gene66885:intron | 25.0% |
| ! | CTCTACCATCTATAAATTAA+TGG | - | chr2.3:38019127-38019146 | None:intergenic | 25.0% |
| ! | GAATGAAATTACAAACCTAA+GGG | - | chr2.3:38015868-38015887 | None:intergenic | 25.0% |
| ! | GAGAAATGTTGATCAATTAA+GGG | + | chr2.3:38015081-38015100 | MS.gene66885:intron | 25.0% |
| ! | TAATCTTCGTATTCGTATAA+AGG | + | chr2.3:38015659-38015678 | MS.gene66885:intron | 25.0% |
| ! | TAATGGTAGATAATGATAGT+TGG | + | chr2.3:38017862-38017881 | MS.gene66885:intron | 25.0% |
| ! | TACAATGAAACATAAAGTCT+AGG | + | chr2.3:38017688-38017707 | MS.gene66885:intron | 25.0% |
| ! | TCATTTGAAGAATAGAGTAA+AGG | - | chr2.3:38016185-38016204 | None:intergenic | 25.0% |
| ! | TCATTTGTAAATTAACAGGA+CGG | + | chr2.3:38015720-38015739 | MS.gene66885:intron | 25.0% |
| ! | TGAATGAAATTACAAACCTA+AGG | - | chr2.3:38015869-38015888 | None:intergenic | 25.0% |
| ! | TGAGAAATGTTGATCAATTA+AGG | + | chr2.3:38015080-38015099 | MS.gene66885:intron | 25.0% |
| ! | TGCTCATATGAGTATTATAT+AGG | - | chr2.3:38014983-38015002 | None:intergenic | 25.0% |
| ! | TGTTCTCATATTTATAGAGA+AGG | - | chr2.3:38017364-38017383 | None:intergenic | 25.0% |
| ! | TTAACAACAAGAGGTTTATT+AGG | + | chr2.3:38018769-38018788 | MS.gene66885:intron | 25.0% |
| ! | TTGAAGATCATCTTATTCTT+GGG | + | chr2.3:38015788-38015807 | MS.gene66885:CDS | 25.0% |
| ! | TTTGAAGATCATCTTATTCT+TGG | + | chr2.3:38015787-38015806 | MS.gene66885:CDS | 25.0% |
| !! | AAAACAATTATTTAGGACAC+CGG | - | chr2.3:38014922-38014941 | None:intergenic | 25.0% |
| !! | GTCTTGTATAATTTTGTAGA+TGG | + | chr2.3:38016383-38016402 | MS.gene66885:intron | 25.0% |
| !! | TGACTCTTATTTGATTAAAC+AGG | - | chr2.3:38015703-38015722 | None:intergenic | 25.0% |
| !!! | AGTTTTTCAAAACACTTTAG+GGG | - | chr2.3:38017452-38017471 | None:intergenic | 25.0% |
| !!! | CAATTCACTTTTGTATTCTA+AGG | - | chr2.3:38018202-38018221 | None:intergenic | 25.0% |
| !!! | GGATTGATTTAGATGAATTT+TGG | - | chr2.3:38017130-38017149 | None:intergenic | 25.0% |
| !!! | TAAATTTCAAGTTAAGGCAT+AGG | - | chr2.3:38016567-38016586 | None:intergenic | 25.0% |
| !!! | TCCTATGTTTTTTACATTAG+CGG | + | chr2.3:38015312-38015331 | MS.gene66885:intron | 25.0% |
| !!! | TGTTTTTGATAGATCTGTTT+TGG | + | chr2.3:38019191-38019210 | MS.gene66885:CDS | 25.0% |
| !!! | TTATTTTTTTGGGGGAAAAT+CGG | + | chr2.3:38018257-38018276 | MS.gene66885:intron | 25.0% |
| AAATAGGTTCGTATGAACAA+GGG | - | chr2.3:38017596-38017615 | None:intergenic | 30.0% | |
| AACAGATTCTAGACAGATTA+TGG | + | chr2.3:38017151-38017170 | MS.gene66885:intron | 30.0% | |
| AAGAAACTCCAAATTCAAAC+AGG | - | chr2.3:38015987-38016006 | None:intergenic | 30.0% | |
| AAGAATAGAGTAAAGGAACT+GGG | - | chr2.3:38016178-38016197 | None:intergenic | 30.0% | |
| AATACTCATATGAGCAGTTT+CGG | + | chr2.3:38014987-38015006 | MS.gene66885:intron | 30.0% | |
| AATGAGACATGCATTAGTTA+TGG | + | chr2.3:38017300-38017319 | MS.gene66885:intron | 30.0% | |
| ACAATCAATACTCTCCTTTA+AGG | + | chr2.3:38018928-38018947 | MS.gene66885:intron | 30.0% | |
| ACACAGTTCAAAAGAAAGTT+TGG | - | chr2.3:38017777-38017796 | None:intergenic | 30.0% | |
| ACCGCTAATGTAAAAAACAT+AGG | - | chr2.3:38015316-38015335 | None:intergenic | 30.0% | |
| ACCTTAATCTTTATCCTGTA+GGG | + | chr2.3:38016872-38016891 | MS.gene66885:intron | 30.0% | |
| AGAAACTCCAAATTCAAACA+GGG | - | chr2.3:38015986-38016005 | None:intergenic | 30.0% | |
| ATATAACCAACGAAGGTAAT+TGG | - | chr2.3:38015527-38015546 | None:intergenic | 30.0% | |
| ATCGAGAAGCAAAAAACAAA+TGG | - | chr2.3:38016615-38016634 | None:intergenic | 30.0% | |
| ATGACATAAATTGCTCAAGT+TGG | + | chr2.3:38015214-38015233 | MS.gene66885:intron | 30.0% | |
| ATGGAATTTAGTGGTGTTTA+TGG | - | chr2.3:38016763-38016782 | None:intergenic | 30.0% | |
| ATGGTAGATAATGATAGTTG+GGG | + | chr2.3:38017864-38017883 | MS.gene66885:intron | 30.0% | |
| CAAGGTATGAGAATTATATC+AGG | - | chr2.3:38018103-38018122 | None:intergenic | 30.0% | |
| CAAGTTTACTATGTTCTTAC+GGG | - | chr2.3:38019007-38019026 | None:intergenic | 30.0% | |
| CACATAATCATAAGATTCCA+TGG | + | chr2.3:38017424-38017443 | MS.gene66885:intron | 30.0% | |
| CATGGAATCTTATGATTATG+TGG | - | chr2.3:38017426-38017445 | None:intergenic | 30.0% | |
| CTGAAATGATGATATGATCA+AGG | - | chr2.3:38018231-38018250 | None:intergenic | 30.0% | |
| CTTGCTTGAATCTCAAAATT+AGG | - | chr2.3:38018629-38018648 | None:intergenic | 30.0% | |
| CTTGTGTTAGTTCATAGAAT+AGG | - | chr2.3:38016072-38016091 | None:intergenic | 30.0% | |
| GGTCAAATACAATGATATCT+TGG | + | chr2.3:38015175-38015194 | MS.gene66885:intron | 30.0% | |
| GTATAAAGGATTAACTGACT+TGG | + | chr2.3:38015589-38015608 | MS.gene66885:CDS | 30.0% | |
| TAAATAGGTTCGTATGAACA+AGG | - | chr2.3:38017597-38017616 | None:intergenic | 30.0% | |
| TACAAAGAACACAAGCAAAA+AGG | - | chr2.3:38016212-38016231 | None:intergenic | 30.0% | |
| TACCTTAATCTTTATCCTGT+AGG | + | chr2.3:38016871-38016890 | MS.gene66885:intron | 30.0% | |
| TAGAAGACTTGCAAATTCAA+AGG | + | chr2.3:38018739-38018758 | MS.gene66885:intron | 30.0% | |
| TCAAATATGTAAGCTATCCT+AGG | + | chr2.3:38018979-38018998 | MS.gene66885:intron | 30.0% | |
| TCAAGAAAATGATTGGTGAA+AGG | - | chr2.3:38018445-38018464 | None:intergenic | 30.0% | |
| TCTATGAACTAACACAAGTA+TGG | + | chr2.3:38016074-38016093 | MS.gene66885:intron | 30.0% | |
| TCTTAAAATGTTGGGGAAAA+AGG | - | chr2.3:38015898-38015917 | None:intergenic | 30.0% | |
| TGAAAGGAAGAACATAATGA+AGG | - | chr2.3:38016035-38016054 | None:intergenic | 30.0% | |
| TGAAGAACAACTCTATTCAA+GGG | + | chr2.3:38014663-38014682 | MS.gene66885:CDS | 30.0% | |
| TGAAGATCATCTTATTCTTG+GGG | + | chr2.3:38015789-38015808 | MS.gene66885:CDS | 30.0% | |
| TTTCTTGACTTTGATGCTTA+GGG | + | chr2.3:38018457-38018476 | MS.gene66885:intron | 30.0% | |
| ! | AATTTTCTGATGTGTGTGTA+TGG | + | chr2.3:38016984-38017003 | MS.gene66885:intron | 30.0% |
| ! | ATTTTCTGATGTGTGTGTAT+GGG | + | chr2.3:38016985-38017004 | MS.gene66885:intron | 30.0% |
| ! | CTTTTCTAGATGGAATTTAG+TGG | - | chr2.3:38016772-38016791 | None:intergenic | 30.0% |
| ! | GATGAGATATCCTCTAAAAA+GGG | + | chr2.3:38016632-38016651 | MS.gene66885:intron | 30.0% |
| ! | TAATCTGTCTAGAATCTGTT+AGG | - | chr2.3:38017151-38017170 | None:intergenic | 30.0% |
| ! | TTAATTCTATTTGATAGCCC+TGG | - | chr2.3:38017521-38017540 | None:intergenic | 30.0% |
| ! | TTTTCTATTGGAGTTGTATG+AGG | + | chr2.3:38016798-38016817 | MS.gene66885:intron | 30.0% |
| ! | TTTTCTTGACTTTGATGCTT+AGG | + | chr2.3:38018456-38018475 | MS.gene66885:intron | 30.0% |
| !! | ACTGATATAAGGTTGGTTTA+TGG | - | chr2.3:38016660-38016679 | None:intergenic | 30.0% |
| !! | GAAAAGCAGCTATTTTCTAT+TGG | + | chr2.3:38016786-38016805 | MS.gene66885:intron | 30.0% |
| !! | TAATTTCAGGTTGAGTTTGT+TGG | + | chr2.3:38017917-38017936 | MS.gene66885:intron | 30.0% |
| !!! | AAAATAGCTGCTTTTCTAGA+TGG | - | chr2.3:38016782-38016801 | None:intergenic | 30.0% |
| !!! | AGATCTGTTTTGGTATCAAA+CGG | + | chr2.3:38019201-38019220 | MS.gene66885:CDS | 30.0% |
| AACCTGTATATAACCAACGA+AGG | - | chr2.3:38015534-38015553 | None:intergenic | 35.0% | |
| AATAGGTTCGTATGAACAAG+GGG | - | chr2.3:38017595-38017614 | None:intergenic | 35.0% | |
| ATACATATAACCGACACATG+TGG | - | chr2.3:38016152-38016171 | None:intergenic | 35.0% | |
| ATCAATGCACCAGAGATAAT+CGG | - | chr2.3:38015845-38015864 | None:intergenic | 35.0% | |
| ATTATATAGGTGTCAGACAC+CGG | - | chr2.3:38014970-38014989 | None:intergenic | 35.0% | |
| CCAAGGGATATTACGTATAA+AGG | + | chr2.3:38015575-38015594 | MS.gene66885:CDS | 35.0% | |
| CCTTTATACGTAATATCCCT+TGG | - | chr2.3:38015578-38015597 | None:intergenic | 35.0% | |
| CTCACATATATGCTCCTTAA+AGG | - | chr2.3:38018945-38018964 | None:intergenic | 35.0% | |
| CTGAAGAACAACTCTATTCA+AGG | + | chr2.3:38014662-38014681 | MS.gene66885:CDS | 35.0% | |
| CTTGCAAATTCAAAGGCTTT+AGG | + | chr2.3:38018746-38018765 | MS.gene66885:intron | 35.0% | |
| GAACCTGAAACAAGGATAAA+GGG | + | chr2.3:38017059-38017078 | MS.gene66885:intron | 35.0% | |
| GAAGAATAGAGTAAAGGAAC+TGG | - | chr2.3:38016179-38016198 | None:intergenic | 35.0% | |
| GCAAAACAGGATATGCTAAT+AGG | + | chr2.3:38017886-38017905 | MS.gene66885:intron | 35.0% | |
| GCAGACTATAGAATCGTATA+AGG | - | chr2.3:38016697-38016716 | None:intergenic | 35.0% | |
| GCGATATTAGACTATGATAC+AGG | - | chr2.3:38015410-38015429 | None:intergenic | 35.0% | |
| GGGAATTGTAGAAGCTTATT+GGG | + | chr2.3:38018528-38018547 | MS.gene66885:CDS | 35.0% | |
| GTGTAACCTTCATTTCTTTC+AGG | + | chr2.3:38018279-38018298 | MS.gene66885:intron | 35.0% | |
| GTGTTTATGGAGATTCTACT+GGG | - | chr2.3:38016750-38016769 | None:intergenic | 35.0% | |
| TAACCTTCATTTCTTTCAGG+TGG | + | chr2.3:38018282-38018301 | MS.gene66885:intron | 35.0% | |
| TAATTCTATGTTAGTAGCCC+AGG | - | chr2.3:38018353-38018372 | None:intergenic | 35.0% | |
| TAATTCTCATACCTTGTAGG+TGG | + | chr2.3:38018107-38018126 | MS.gene66885:intron | 35.0% | |
| TAGAGAAGGAAATGAATGTG+TGG | - | chr2.3:38017350-38017369 | None:intergenic | 35.0% | |
| TGAGATTCAAGCAAGTGTTT+GGG | + | chr2.3:38018634-38018653 | MS.gene66885:intron | 35.0% | |
| TGCAACTAATCAGGTGATTA+TGG | + | chr2.3:38018166-38018185 | MS.gene66885:intron | 35.0% | |
| TGGTTATATACAGGTTGTGA+TGG | + | chr2.3:38015538-38015557 | MS.gene66885:intron | 35.0% | |
| TGTTGTTAAGAATGCACTTG+AGG | - | chr2.3:38017652-38017671 | None:intergenic | 35.0% | |
| TTAAGAGCAGTGGCATTAAT+GGG | + | chr2.3:38014800-38014819 | MS.gene66885:intron | 35.0% | |
| TTAAGCATACAACTAGATGC+TGG | + | chr2.3:38015931-38015950 | MS.gene66885:intron | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | + | chr2.3:38016139-38016158 | MS.gene66885:intron | 35.0% | |
| TTGAGATTCAAGCAAGTGTT+TGG | + | chr2.3:38018633-38018652 | MS.gene66885:intron | 35.0% | |
| TTTAAGAGCAGTGGCATTAA+TGG | + | chr2.3:38014799-38014818 | MS.gene66885:intron | 35.0% | |
| ! | CGATGAGATATCCTCTAAAA+AGG | + | chr2.3:38016631-38016650 | MS.gene66885:intron | 35.0% |
| ! | GTTTATGGTACCCTTTTTAG+AGG | - | chr2.3:38016645-38016664 | None:intergenic | 35.0% |
| ! | TACCTTCGTTGGTTATATAC+AGG | + | chr2.3:38015529-38015548 | MS.gene66885:intron | 35.0% |
| ! | TTTTCTGATGTGTGTGTATG+GGG | + | chr2.3:38016986-38017005 | MS.gene66885:intron | 35.0% |
| !! | CTTTATCCTTGTTTCAGGTT+CGG | - | chr2.3:38017060-38017079 | None:intergenic | 35.0% |
| !! | TTGTTGTTTCATGGATCACT+TGG | + | chr2.3:38016345-38016364 | MS.gene66885:intron | 35.0% |
| !!! | AAATAGTTTTGTAGCTGCTG+CGG | - | chr2.3:38014554-38014573 | None:intergenic | 35.0% |
| AAAGTCAAACCTCTCGAAGT+TGG | + | chr2.3:38014596-38014615 | MS.gene66885:CDS | 40.0% | |
| AACTGAGTCAAGATGGATAG+TGG | - | chr2.3:38016907-38016926 | None:intergenic | 40.0% | |
| AAGAATTTACGGATGTCAGC+AGG | + | chr2.3:38018377-38018396 | MS.gene66885:CDS | 40.0% | |
| AATGATAGTTGGGGCAAAAC+AGG | + | chr2.3:38017873-38017892 | MS.gene66885:intron | 40.0% | |
| AATGTGTGGATCAGCATAGT+TGG | - | chr2.3:38017336-38017355 | None:intergenic | 40.0% | |
| ACTACGCTATTTAAGAGCAG+TGG | + | chr2.3:38014790-38014809 | MS.gene66885:intron | 40.0% | |
| ACTCTTGTATCTATGGTGTG+CGG | - | chr2.3:38015049-38015068 | None:intergenic | 40.0% | |
| ACTTCACAACTGAGTCAAGA+TGG | - | chr2.3:38016914-38016933 | None:intergenic | 40.0% | |
| AGAATTTACGGATGTCAGCA+GGG | + | chr2.3:38018378-38018397 | MS.gene66885:CDS | 40.0% | |
| ATGCCTCATCTCTTCCATTT+AGG | + | chr2.3:38016717-38016736 | MS.gene66885:intron | 40.0% | |
| ATGCGAGTATTCCAACACAT+AGG | - | chr2.3:38017947-38017966 | None:intergenic | 40.0% | |
| ATGGAGATTCTACTGGGATA+TGG | - | chr2.3:38016744-38016763 | None:intergenic | 40.0% | |
| ATGTAGCTTCCGATTATCTC+TGG | + | chr2.3:38015833-38015852 | MS.gene66885:CDS | 40.0% | |
| CATCTTATTCTTGGGGAAGA+AGG | + | chr2.3:38015796-38015815 | MS.gene66885:CDS | 40.0% | |
| CATGAAACAACAAATGCACG+AGG | - | chr2.3:38016338-38016357 | None:intergenic | 40.0% | |
| CCAAATTCAAACAGGGCAAA+AGG | - | chr2.3:38015979-38015998 | None:intergenic | 40.0% | |
| CGAACCTGAAACAAGGATAA+AGG | + | chr2.3:38017058-38017077 | MS.gene66885:intron | 40.0% | |
| CGAAGCTGCAATATTAGAAG+TGG | + | chr2.3:38015753-38015772 | MS.gene66885:CDS | 40.0% | |
| CTATTGGAGTTGTATGAGGA+AGG | + | chr2.3:38016802-38016821 | MS.gene66885:intron | 40.0% | |
| GAACAACTCTATTCAAGGGT+TGG | + | chr2.3:38014667-38014686 | MS.gene66885:CDS | 40.0% | |
| GCCCTACAGGATAAAGATTA+AGG | - | chr2.3:38016876-38016895 | None:intergenic | 40.0% | |
| GCTTGTGTTCTTTGTATGTG+AGG | + | chr2.3:38016216-38016235 | MS.gene66885:intron | 40.0% | |
| GGACACATACTACGAATGAA+AGG | - | chr2.3:38016051-38016070 | None:intergenic | 40.0% | |
| GGATGCTGTTAATAAGCCAA+GGG | + | chr2.3:38015559-38015578 | MS.gene66885:CDS | 40.0% | |
| GGTGTTTATGGAGATTCTAC+TGG | - | chr2.3:38016751-38016770 | None:intergenic | 40.0% | |
| GTTCCACCTGAAAGAAATGA+AGG | - | chr2.3:38018288-38018307 | None:intergenic | 40.0% | |
| TAAGAGCAGTGGCATTAATG+GGG | + | chr2.3:38014801-38014820 | MS.gene66885:intron | 40.0% | |
| TCTGTTGGAGTTCTATATCG+AGG | + | chr2.3:38016446-38016465 | MS.gene66885:CDS | 40.0% | |
| TGACATCCAATTACCTTCGT+TGG | + | chr2.3:38015518-38015537 | MS.gene66885:intron | 40.0% | |
| TGCCTCATCTCTTCCATTTA+GGG | + | chr2.3:38016718-38016737 | MS.gene66885:intron | 40.0% | |
| TGGATGCTGTTAATAAGCCA+AGG | + | chr2.3:38015558-38015577 | MS.gene66885:CDS | 40.0% | |
| TGGTAACTAAGAATGATCGC+AGG | + | chr2.3:38018827-38018846 | MS.gene66885:intron | 40.0% | |
| TTATAGATGGTAGAGGAAGC+TGG | + | chr2.3:38019132-38019151 | MS.gene66885:intron | 40.0% | |
| TTGAGATGTCCAATGAAGCA+CGG | + | chr2.3:38014829-38014848 | MS.gene66885:intron | 40.0% | |
| TTGATGCTTAGGGTGTAAGA+CGG | + | chr2.3:38018467-38018486 | MS.gene66885:intron | 40.0% | |
| ! | AAAACACTTTAGGGGTTCCA+TGG | - | chr2.3:38017444-38017463 | None:intergenic | 40.0% |
| ! | CCTTTTGCCCTGTTTGAATT+TGG | + | chr2.3:38015976-38015995 | MS.gene66885:intron | 40.0% |
| ! | CTCTTCTAGTGACAGGTTTT+GGG | + | chr2.3:38018311-38018330 | MS.gene66885:CDS | 40.0% |
| ! | GGAATATCGTCTAAAGCCAT+GGG | + | chr2.3:38018549-38018568 | MS.gene66885:CDS | 40.0% |
| ! | TCTCTTCTAGTGACAGGTTT+TGG | + | chr2.3:38018310-38018329 | MS.gene66885:CDS | 40.0% |
| ! | TGTCCCTTTATCCTTGTTTC+AGG | - | chr2.3:38017065-38017084 | None:intergenic | 40.0% |
| ! | TTCGAGAGGTTTGACTTTGA+AGG | - | chr2.3:38014594-38014613 | None:intergenic | 40.0% |
| !! | CTCGTGCATTTGTTGTTTCA+TGG | + | chr2.3:38016336-38016355 | MS.gene66885:intron | 40.0% |
| !! | GGCTTTAGGTTAACAACAAG+AGG | + | chr2.3:38018760-38018779 | MS.gene66885:intron | 40.0% |
| !! | TCTAAGGGGTTGATAGAAGT+TGG | - | chr2.3:38018005-38018024 | None:intergenic | 40.0% |
| !! | TTTCAGGTTGAGTTTGTTGG+TGG | + | chr2.3:38017920-38017939 | MS.gene66885:intron | 40.0% |
| AAATCCTACTGCTGCTACAG+TGG | + | chr2.3:38016469-38016488 | MS.gene66885:CDS | 45.0% | |
| AAGAGCAGTGGCATTAATGG+GGG | + | chr2.3:38014802-38014821 | MS.gene66885:intron | 45.0% | |
| ATAGCCCTGGTATGAACAAG+GGG | - | chr2.3:38017508-38017527 | None:intergenic | 45.0% | |
| ATCTCCTATGAAGCATGCAC+TGG | - | chr2.3:38015385-38015404 | None:intergenic | 45.0% | |
| CATACCCCTTGTTCATACCA+GGG | + | chr2.3:38017501-38017520 | MS.gene66885:intron | 45.0% | |
| CCAACAGAAACAGCAAAGCT+GGG | - | chr2.3:38016434-38016453 | None:intergenic | 45.0% | |
| CGAAGTGAGTGCAACTAATC+AGG | + | chr2.3:38018157-38018176 | MS.gene66885:CDS | 45.0% | |
| CTATGTTCTTACGGGTTCCT+AGG | - | chr2.3:38018999-38019018 | None:intergenic | 45.0% | |
| CTTATTCTTGGGGAAGAAGG+AGG | + | chr2.3:38015799-38015818 | MS.gene66885:CDS | 45.0% | |
| GAACGATCTCTTCTAGTGAC+AGG | + | chr2.3:38018304-38018323 | MS.gene66885:CDS | 45.0% | |
| GATAGCCCTGGTATGAACAA+GGG | - | chr2.3:38017509-38017528 | None:intergenic | 45.0% | |
| GGGACAACAAACTTTGCACA+TGG | + | chr2.3:38016404-38016423 | MS.gene66885:CDS | 45.0% | |
| GTATGAACACGATGAAGCCT+GGG | + | chr2.3:38018333-38018352 | MS.gene66885:CDS | 45.0% | |
| TACTGGGATATGGCCCTAAA+TGG | - | chr2.3:38016734-38016753 | None:intergenic | 45.0% | |
| TCAGCACTGCTATGCTATCT+GGG | - | chr2.3:38017033-38017052 | None:intergenic | 45.0% | |
| TCAGTTGTGAAGTGACGTCT+CGG | + | chr2.3:38016921-38016940 | MS.gene66885:intron | 45.0% | |
| TCATACCCCTTGTTCATACC+AGG | + | chr2.3:38017500-38017519 | MS.gene66885:intron | 45.0% | |
| TCCAACAGAAACAGCAAAGC+TGG | - | chr2.3:38016435-38016454 | None:intergenic | 45.0% | |
| TGATAGCCCTGGTATGAACA+AGG | - | chr2.3:38017510-38017529 | None:intergenic | 45.0% | |
| TGGTGAAAGGCAGAGAAATG+AGG | - | chr2.3:38018432-38018451 | None:intergenic | 45.0% | |
| TTCTCATACCTTGTAGGTGG+TGG | + | chr2.3:38018110-38018129 | MS.gene66885:intron | 45.0% | |
| TTGCACTCACTTCGATCCTT+TGG | - | chr2.3:38018151-38018170 | None:intergenic | 45.0% | |
| ! | ATTCCTTCTCCGTTTTCCGT+TGG | - | chr2.3:38016967-38016986 | None:intergenic | 45.0% |
| ! | GAGAGGTTTGACTTTGAAGG+CGG | - | chr2.3:38014591-38014610 | None:intergenic | 45.0% |
| ! | GGGAATATCGTCTAAAGCCA+TGG | + | chr2.3:38018548-38018567 | MS.gene66885:CDS | 45.0% |
| ! | TCGTCTAAAGCCATGGGATA+TGG | + | chr2.3:38018555-38018574 | MS.gene66885:CDS | 45.0% |
| ! | TTGACTTTGAAGGCGGTAAG+TGG | - | chr2.3:38014584-38014603 | None:intergenic | 45.0% |
| !! | ACTGACTTGGTGACTGAGTA+AGG | + | chr2.3:38015602-38015621 | MS.gene66885:intron | 45.0% |
| !! | CTTGATTTCTGGCCTACCAA+CGG | + | chr2.3:38016948-38016967 | MS.gene66885:intron | 45.0% |
| !! | GCAAGTGTTTGGGTTTTGTG+TGG | + | chr2.3:38018644-38018663 | MS.gene66885:intron | 45.0% |
| !! | TTGTTGGTGGTCCTATGTGT+TGG | + | chr2.3:38017933-38017952 | MS.gene66885:CDS | 45.0% |
| !! | ATGAATAAATAATAAAATAA+AGG | + | chr2.3:38015154-38015173 | MS.gene66885:intron | 5.0% |
| AAACGGCGTGATCCATGCTA+AGG | + | chr2.3:38019218-38019237 | MS.gene66885:CDS | 50.0% | |
| AACGGCGTGATCCATGCTAA+GGG | + | chr2.3:38019219-38019238 | MS.gene66885:CDS | 50.0% | |
| AAGGATAAAGGGACAGCGTG+TGG | + | chr2.3:38017070-38017089 | MS.gene66885:intron | 50.0% | |
| AATGAAGCACGGACACCTCT+AGG | + | chr2.3:38014840-38014859 | MS.gene66885:intron | 50.0% | |
| AGAATGCTCCACCACCTACA+AGG | - | chr2.3:38018121-38018140 | None:intergenic | 50.0% | |
| ATCACCACTGTAGCAGCAGT+AGG | - | chr2.3:38016476-38016495 | None:intergenic | 50.0% | |
| ATCTATGGTGTGCGGAAGCA+AGG | - | chr2.3:38015041-38015060 | None:intergenic | 50.0% | |
| CAGCAGTTGTGGCAACTTGA+AGG | - | chr2.3:38014729-38014748 | None:intergenic | 50.0% | |
| CAGTTGTGGCAACTTGAAGG+AGG | - | chr2.3:38014726-38014745 | None:intergenic | 50.0% | |
| CTACCAACGGAAAACGGAGA+AGG | + | chr2.3:38016961-38016980 | MS.gene66885:intron | 50.0% | |
| CTCAGCACTGCTATGCTATC+TGG | - | chr2.3:38017034-38017053 | None:intergenic | 50.0% | |
| GAATGATCGCAGGCTATCTG+TGG | + | chr2.3:38018837-38018856 | MS.gene66885:intron | 50.0% | |
| GACTGCAGTGCTGTGACATA+TGG | - | chr2.3:38017482-38017501 | None:intergenic | 50.0% | |
| GAGTAGCCGAACCTGAAACA+AGG | + | chr2.3:38017051-38017070 | MS.gene66885:intron | 50.0% | |
| GAGTCCAGTGCATGCTTCAT+AGG | + | chr2.3:38015378-38015397 | MS.gene66885:intron | 50.0% | |
| GGCCCTAAATGGAAGAGATG+AGG | - | chr2.3:38016723-38016742 | None:intergenic | 50.0% | |
| GGTATGAACACGATGAAGCC+TGG | + | chr2.3:38018332-38018351 | MS.gene66885:CDS | 50.0% | |
| GTCAAACCTCTCGAAGTTGG+AGG | + | chr2.3:38014599-38014618 | MS.gene66885:CDS | 50.0% | |
| TACTTCGACACTCCTACGAC+CGG | + | chr2.3:38014948-38014967 | MS.gene66885:intron | 50.0% | |
| TAGATGGTAGAGGAAGCTGG+TGG | + | chr2.3:38019135-38019154 | MS.gene66885:intron | 50.0% | |
| TCTATGGTGTGCGGAAGCAA+GGG | - | chr2.3:38015040-38015059 | None:intergenic | 50.0% | |
| TCTGGCCTACCAACGGAAAA+CGG | + | chr2.3:38016955-38016974 | MS.gene66885:intron | 50.0% | |
| TGCTGTGGACATGTGTCATG+TGG | + | chr2.3:38018501-38018520 | MS.gene66885:CDS | 50.0% | |
| TTTCAGCCTCCAACTTCGAG+AGG | - | chr2.3:38014608-38014627 | None:intergenic | 50.0% | |
| ! | AAGGAGGATCGCAGGTTGAA+CGG | - | chr2.3:38014710-38014729 | None:intergenic | 50.0% |
| ! | CGCATTTTCACTGCAACTGC+TGG | + | chr2.3:38017962-38017981 | MS.gene66885:CDS | 50.0% |
| ! | CTCTGGTGCATTGATCCCTT+AGG | + | chr2.3:38015850-38015869 | MS.gene66885:CDS | 50.0% |
| ! | CTTCTCCGTTTTCCGTTGGT+AGG | - | chr2.3:38016963-38016982 | None:intergenic | 50.0% |
| ! | CTTTGAAGGCGGTAAGTGGT+AGG | - | chr2.3:38014580-38014599 | None:intergenic | 50.0% |
| ! | GGATATGGCTGCTGGTGTTT+TGG | + | chr2.3:38018570-38018589 | MS.gene66885:CDS | 50.0% |
| ! | GTCTCGGTGGACTTGATTTC+TGG | + | chr2.3:38016937-38016956 | MS.gene66885:intron | 50.0% |
| ! | TACGGGTGTCATAGGAGTGT+CGG | - | chr2.3:38014885-38014904 | None:intergenic | 50.0% |
| !! | CCCAGCTTTGCTGTTTCTGT+TGG | + | chr2.3:38016431-38016450 | MS.gene66885:CDS | 50.0% |
| !! | GGGGAAGAAGGAGGCATTAT+AGG | + | chr2.3:38015808-38015827 | MS.gene66885:CDS | 50.0% |
| !! | TAGAGGTGTCCGTGCTTCAT+TGG | - | chr2.3:38014841-38014860 | None:intergenic | 50.0% |
| !!! | TAGTTTTGTAGCTGCTGCGG+AGG | - | chr2.3:38014551-38014570 | None:intergenic | 50.0% |
| AAGCCATGGGATATGGCTGC+TGG | + | chr2.3:38018562-38018581 | MS.gene66885:CDS | 55.0% | |
| AAGCTGGTGGCACAGTCTCT+CGG | + | chr2.3:38019148-38019167 | MS.gene66885:CDS | 55.0% | |
| ACACCAGCAGCCATATCCCA+TGG | - | chr2.3:38018568-38018587 | None:intergenic | 55.0% | |
| ACAGTCTCTCGGATGGATGG+CGG | + | chr2.3:38019159-38019178 | MS.gene66885:CDS | 55.0% | |
| ACCAGTCTGAGCAGCAGTTG+TGG | - | chr2.3:38014740-38014759 | None:intergenic | 55.0% | |
| AGTGGCTATCAGAGCCCTAC+AGG | - | chr2.3:38016889-38016908 | None:intergenic | 55.0% | |
| ATAAAGGGACAGCGTGTGGC+GGG | + | chr2.3:38017074-38017093 | MS.gene66885:intron | 55.0% | |
| CACCTGACACGACACTGACA+AGG | - | chr2.3:38015349-38015368 | None:intergenic | 55.0% | |
| CGACACTTACACGTCGACAC+TGG | + | chr2.3:38016100-38016119 | MS.gene66885:intron | 55.0% | |
| GAGCATTCTGCAACGGCCAA+AGG | + | chr2.3:38018132-38018151 | MS.gene66885:CDS | 55.0% | |
| GATAAAGGGACAGCGTGTGG+CGG | + | chr2.3:38017073-38017092 | MS.gene66885:intron | 55.0% | |
| GCAACTTGAAGGAGGATCGC+AGG | - | chr2.3:38014718-38014737 | None:intergenic | 55.0% | |
| GCTTAGGGTGTAAGACGGCT+TGG | + | chr2.3:38018472-38018491 | MS.gene66885:intron | 55.0% | |
| GTCCTTGTCAGTGTCGTGTC+AGG | + | chr2.3:38015344-38015363 | MS.gene66885:intron | 55.0% | |
| GTCGTGTCAGGTGTTCGTGT+CGG | + | chr2.3:38015356-38015375 | MS.gene66885:intron | 55.0% | |
| GTTGTGAAGTGACGTCTCGG+TGG | + | chr2.3:38016924-38016943 | MS.gene66885:intron | 55.0% | |
| TGAAGGCGGTAAGTGGTAGG+AGG | - | chr2.3:38014577-38014596 | None:intergenic | 55.0% | |
| ! | ACGTGTCGTACGGGTGTCAT+AGG | - | chr2.3:38014893-38014912 | None:intergenic | 55.0% |
| ! | AGGAGGATCGCAGGTTGAAC+GGG | - | chr2.3:38014709-38014728 | None:intergenic | 55.0% |
| ! | TTTTGTAGCTGCTGCGGAGG+TGG | - | chr2.3:38014548-38014567 | None:intergenic | 55.0% |
| !! | GGTGGTGGAGCATTCTGCAA+CGG | + | chr2.3:38018125-38018144 | MS.gene66885:intron | 55.0% |
| AGGTGTCAGACACCGGTCGT+AGG | - | chr2.3:38014963-38014982 | None:intergenic | 60.0% | |
| ATGGTGTGCGGAAGCAAGGG+AGG | - | chr2.3:38015037-38015056 | None:intergenic | 60.0% | |
| GACACCCGTACGACACGTGT+CGG | + | chr2.3:38014895-38014914 | MS.gene66885:intron | 60.0% | |
| GCCACAACTGCTGCTCAGAC+TGG | + | chr2.3:38014736-38014755 | MS.gene66885:CDS | 60.0% | |
| GGCACAGTCTCTCGGATGGA+TGG | + | chr2.3:38019156-38019175 | MS.gene66885:CDS | 60.0% | |
| GGGTATGACTGCAGTGCTCG+AGG | - | chr2.3:38017575-38017594 | None:intergenic | 60.0% | |
| TGGTGGCACAGTCTCTCGGA+TGG | + | chr2.3:38019152-38019171 | MS.gene66885:CDS | 60.0% | |
| ! | TGCTGCTCAGACTGGTGCCA+AGG | + | chr2.3:38014744-38014763 | MS.gene66885:CDS | 60.0% |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | + | chr2.3:38014856-38014875 | MS.gene66885:intron | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | + | chr2.3:38014846-38014865 | MS.gene66885:intron | 60.0% |
| CCGGTCCGACACGTGTCGTA+CGG | - | chr2.3:38014903-38014922 | None:intergenic | 65.0% | |
| CCGTACGACACGTGTCGGAC+CGG | + | chr2.3:38014900-38014919 | MS.gene66885:intron | 65.0% | |
| CGCGACACGCCTAGTCCTAG+AGG | - | chr2.3:38014858-38014877 | None:intergenic | 65.0% | |
| CGGTCCGACACGTGTCGTAC+GGG | - | chr2.3:38014902-38014921 | None:intergenic | 65.0% | |
| ! | CGCAGGTTGAACGGGTCCAG+TGG | - | chr2.3:38014701-38014720 | None:intergenic | 65.0% |
| !! | ACGGCTTGGTGCAGCTGCTG+TGG | + | chr2.3:38018486-38018505 | MS.gene66885:CDS | 65.0% |
| !! | AGGGTTGGTGCACGCTCCAC+TGG | + | chr2.3:38014682-38014701 | MS.gene66885:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 38014529 | 38019239 | 38014529 | ID=MS.gene66885 |
| chr2.3 | mRNA | 38014529 | 38019239 | 38014529 | ID=MS.gene66885.t1;Parent=MS.gene66885 |
| chr2.3 | exon | 38014529 | 38014765 | 38014529 | ID=MS.gene66885.t1.exon1;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38014529 | 38014765 | 38014529 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38015551 | 38015618 | 38015551 | ID=MS.gene66885.t1.exon2;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38015551 | 38015618 | 38015551 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38015738 | 38015871 | 38015738 | ID=MS.gene66885.t1.exon3;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38015738 | 38015871 | 38015738 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38016402 | 38016490 | 38016402 | ID=MS.gene66885.t1.exon4;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38016402 | 38016490 | 38016402 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38017926 | 38017983 | 38017926 | ID=MS.gene66885.t1.exon5;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38017926 | 38017983 | 38017926 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38018126 | 38018178 | 38018126 | ID=MS.gene66885.t1.exon6;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38018126 | 38018178 | 38018126 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38018301 | 38018399 | 38018301 | ID=MS.gene66885.t1.exon7;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38018301 | 38018399 | 38018301 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38018478 | 38018591 | 38018478 | ID=MS.gene66885.t1.exon8;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38018478 | 38018591 | 38018478 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| chr2.3 | exon | 38019138 | 38019239 | 38019138 | ID=MS.gene66885.t1.exon9;Parent=MS.gene66885.t1 |
| chr2.3 | CDS | 38019138 | 38019239 | 38019138 | ID=cds.MS.gene66885.t1;Parent=MS.gene66885.t1 |
| Gene Sequence |
| Protein sequence |
