Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67234.t1 | XP_003615951.1 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 3.50E-101 | 377.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67234.t1 | O22922 | 76.9 | 234 | 51 | 2 | 1 | 233 | 1 | 232 | 2.0e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67234.t1 | G7K5T4 | 99.1 | 233 | 2 | 0 | 1 | 233 | 1 | 233 | 2.5e-101 | 377.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054937 | MS.gene67234 | 0.813778 | 2.15E-51 | -1.69E-46 |
| MS.gene057052 | MS.gene67234 | 0.804715 | 1.89E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67234.t1 | MTR_5g074430 | 98.283 | 233 | 4 | 0 | 1 | 233 | 1 | 233 | 2.71e-173 | 476 |
| MS.gene67234.t1 | MTR_5g074430 | 97.863 | 234 | 4 | 1 | 1 | 233 | 1 | 234 | 1.15e-171 | 471 |
| MS.gene67234.t1 | MTR_1g055405 | 94.382 | 178 | 8 | 2 | 57 | 233 | 103 | 279 | 5.37e-108 | 312 |
| MS.gene67234.t1 | MTR_4g084990 | 61.864 | 236 | 80 | 3 | 7 | 233 | 11 | 245 | 1.30e-100 | 292 |
| MS.gene67234.t1 | MTR_4g084990 | 60.256 | 234 | 86 | 2 | 7 | 233 | 11 | 244 | 1.04e-99 | 290 |
| MS.gene67234.t1 | MTR_7g108715 | 57.500 | 160 | 58 | 3 | 83 | 233 | 3 | 161 | 3.89e-56 | 176 |
| MS.gene67234.t1 | MTR_4g084990 | 56.204 | 137 | 60 | 0 | 7 | 143 | 11 | 147 | 8.24e-53 | 169 |
| MS.gene67234.t1 | MTR_3g072860 | 84.810 | 79 | 12 | 0 | 46 | 124 | 62 | 140 | 5.09e-30 | 109 |
| MS.gene67234.t1 | MTR_7g108725 | 64.615 | 65 | 23 | 0 | 7 | 71 | 11 | 75 | 2.18e-25 | 95.9 |
| MS.gene67234.t1 | MTR_4g085040 | 64.615 | 65 | 23 | 0 | 9 | 73 | 13 | 77 | 7.26e-23 | 91.3 |
| MS.gene67234.t1 | MTR_4g085000 | 63.333 | 60 | 22 | 0 | 5 | 64 | 9 | 68 | 1.80e-21 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67234.t1 | AT2G30260 | 69.915 | 236 | 64 | 3 | 1 | 233 | 1 | 232 | 6.58e-124 | 351 |
| MS.gene67234.t1 | AT1G06960 | 72.961 | 233 | 59 | 2 | 1 | 233 | 1 | 229 | 6.23e-122 | 346 |
| MS.gene67234.t1 | AT1G06960 | 70.707 | 198 | 54 | 2 | 36 | 233 | 7 | 200 | 1.45e-96 | 280 |
| MS.gene67234.t1 | AT2G47580 | 56.904 | 239 | 92 | 4 | 5 | 233 | 13 | 250 | 6.09e-87 | 258 |
| MS.gene67234.t1 | AT2G30260 | 68.919 | 148 | 41 | 1 | 1 | 148 | 1 | 143 | 5.74e-72 | 217 |
| MS.gene67234.t1 | AT1G06960 | 74.825 | 143 | 34 | 1 | 1 | 143 | 1 | 141 | 1.93e-70 | 213 |
| MS.gene67234.t1 | AT1G06960 | 82.524 | 103 | 18 | 0 | 1 | 103 | 1 | 103 | 8.16e-63 | 192 |
| MS.gene67234.t1 | AT1G06960 | 66.887 | 151 | 46 | 2 | 83 | 233 | 4 | 150 | 4.87e-62 | 191 |
| MS.gene67234.t1 | AT1G06960 | 75.510 | 98 | 24 | 0 | 36 | 133 | 7 | 104 | 4.87e-45 | 147 |
Find 53 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCAATATGGAAGGATTT+TGG | 0.143011 | 5.3:-58722912 | MS.gene67234:CDS |
| ATTGAGATTCTTAATGTAAA+TGG | 0.200962 | 5.3:+58724936 | None:intergenic |
| CATCTGTCGCACTGCATTAC+TGG | 0.268948 | 5.3:+58722820 | None:intergenic |
| TATTGCTTATTCTCTCAATA+TGG | 0.294966 | 5.3:-58722923 | MS.gene67234:CDS |
| AAACCAGAGAGGATGCTTTC+AGG | 0.319590 | 5.3:-58724979 | None:intergenic |
| TTAATGTAAATGGTTTGATT+TGG | 0.322185 | 5.3:+58724946 | None:intergenic |
| CTTAGCAAAGTTTATAATCA+TGG | 0.324640 | 5.3:+58719400 | None:intergenic |
| GCCTCTTGGGCACCGGACCC+TGG | 0.364979 | 5.3:+58719635 | None:intergenic |
| CTCTATGAACAAAATATTGT+TGG | 0.365120 | 5.3:+58719604 | None:intergenic |
| TGTTGGGAGCAGCTGCCTCT+TGG | 0.368601 | 5.3:+58719621 | None:intergenic |
| GTTGGGAGCAGCTGCCTCTT+GGG | 0.371933 | 5.3:+58719622 | None:intergenic |
| GCACCATGTGTTCCACCATT+AGG | 0.384777 | 5.3:+58720170 | None:intergenic |
| GCCTCATTCCGTCCAGGGTC+CGG | 0.398715 | 5.3:-58719647 | MS.gene67234:CDS |
| ATGTAAATGGTTTGATTTGG+AGG | 0.406769 | 5.3:+58724949 | None:intergenic |
| AAACAATCTTCTGTGCCTAA+TGG | 0.424244 | 5.3:-58720185 | MS.gene67234:CDS |
| AACCAGAGAGGATGCTTTCA+GGG | 0.433914 | 5.3:-58724978 | None:intergenic |
| AGCAGCTGCCTCTTGGGCAC+CGG | 0.444275 | 5.3:+58719628 | None:intergenic |
| ACAATCATCCATGGCAATGC+AGG | 0.453318 | 5.3:-58719456 | MS.gene67234:CDS |
| TCTATGAACAAAATATTGTT+GGG | 0.458630 | 5.3:+58719605 | None:intergenic |
| GACGCCTAAGCTTCGAGGAC+AGG | 0.460104 | 5.3:-58722873 | MS.gene67234:CDS |
| AGAGGGAAGCTTTGTTCCAA+GGG | 0.460175 | 5.3:-58722223 | MS.gene67234:CDS |
| CGCTTGATCGAAGCAAAGCC+AGG | 0.463784 | 5.3:-58719509 | MS.gene67234:CDS |
| TTAGCAAAGTTTATAATCAT+GGG | 0.465775 | 5.3:+58719401 | None:intergenic |
| CATGCCTGTCCTCGAAGCTT+AGG | 0.475388 | 5.3:+58722869 | None:intergenic |
| ACCGGACCCTGGACGGAATG+AGG | 0.501996 | 5.3:+58719646 | None:intergenic |
| AAGCGCACTTCCTTAAAACC+TGG | 0.502688 | 5.3:+58719527 | None:intergenic |
| CAGCAGGCCTCATTCCGTCC+AGG | 0.503368 | 5.3:-58719653 | MS.gene67234:intron |
| CTAAAGACGCCTAAGCTTCG+AGG | 0.510089 | 5.3:-58722878 | MS.gene67234:CDS |
| AAGAGGGAAGCTTTGTTCCA+AGG | 0.510421 | 5.3:-58722224 | MS.gene67234:CDS |
| ATCCTGCCGGTAGTTTCATA+AGG | 0.510992 | 5.3:+58719575 | None:intergenic |
| CTTGGGCACCGGACCCTGGA+CGG | 0.524347 | 5.3:+58719639 | None:intergenic |
| GCTTATTCTCTCAATATGGA+AGG | 0.527328 | 5.3:-58722919 | MS.gene67234:CDS |
| AAATCTACAAATGCGATACC+TGG | 0.531054 | 5.3:+58719491 | None:intergenic |
| TCCAGGGTCCGGTGCCCAAG+AGG | 0.546064 | 5.3:-58719636 | MS.gene67234:CDS |
| AGCAGGCCTCATTCCGTCCA+GGG | 0.559600 | 5.3:-58719652 | MS.gene67234:intron |
| CAATCTTCTGTGCCTAATGG+TGG | 0.560473 | 5.3:-58720182 | MS.gene67234:CDS |
| TGCCTTATGAAACTACCGGC+AGG | 0.562261 | 5.3:-58719577 | MS.gene67234:CDS |
| ATGGCAATGCAGGCTCTACA+AGG | 0.563519 | 5.3:-58719446 | MS.gene67234:CDS |
| TAAGCTTCGAGGACAGGCAT+GGG | 0.574433 | 5.3:-58722867 | MS.gene67234:CDS |
| CTAAGCTTCGAGGACAGGCA+TGG | 0.581122 | 5.3:-58722868 | MS.gene67234:CDS |
| GATTGTATTGCTAAAGAAGA+GGG | 0.592319 | 5.3:-58722240 | MS.gene67234:CDS |
| GAGCATTTCGAGCATCCTGC+CGG | 0.593424 | 5.3:+58719562 | None:intergenic |
| TTGTAGAGCCTGCATTGCCA+TGG | 0.596181 | 5.3:+58719448 | None:intergenic |
| AGCGCACTTCCTTAAAACCT+GGG | 0.597463 | 5.3:+58719528 | None:intergenic |
| GTGCCTAATGGTGGAACACA+TGG | 0.600600 | 5.3:-58720173 | MS.gene67234:CDS |
| ATGCTCTTCGAACAATACCC+AGG | 0.603681 | 5.3:-58719545 | MS.gene67234:CDS |
| AGATGAGGCACAATCATCCA+TGG | 0.621792 | 5.3:-58719465 | MS.gene67234:CDS |
| AATTTGCCTTATGAAACTAC+CGG | 0.623907 | 5.3:-58719581 | MS.gene67234:CDS |
| AATGAAAAGATCAAGAAAGA+CGG | 0.624809 | 5.3:-58724916 | MS.gene67234:intron |
| GGAACACATGGTGCAAGTAA+TGG | 0.626001 | 5.3:-58720161 | MS.gene67234:CDS |
| AGATTGTATTGCTAAAGAAG+AGG | 0.631624 | 5.3:-58722241 | MS.gene67234:CDS |
| ACCAGAGAGGATGCTTTCAG+GGG | 0.636302 | 5.3:-58724977 | None:intergenic |
| ACACATGGTGCAAGTAATGG+TGG | 0.721642 | 5.3:-58720158 | MS.gene67234:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGTAAATATTTATACATA+AGG | + | chr5.3:58720662-58720681 | None:intergenic | 10.0% |
| !!! | AATTTTTTGTTGAATTATTA+GGG | - | chr5.3:58719637-58719656 | MS.gene67234:CDS | 10.0% |
| !!! | TGTATATACTTTATATTTTA+AGG | - | chr5.3:58723633-58723652 | MS.gene67234:intron | 10.0% |
| !! | AAATAATAATTCAAAAAGTG+AGG | + | chr5.3:58722234-58722253 | None:intergenic | 15.0% |
| !! | AAATTAATGTTTAGTACAAA+AGG | + | chr5.3:58722901-58722920 | None:intergenic | 15.0% |
| !! | CAAAAATGATAGAAAATATT+AGG | - | chr5.3:58722381-58722400 | MS.gene67234:intron | 15.0% |
| !! | TAAAAAGTTAATGAAAATTG+TGG | - | chr5.3:58720261-58720280 | MS.gene67234:intron | 15.0% |
| !! | TAATAATCAACATAGATTAA+AGG | + | chr5.3:58724243-58724262 | None:intergenic | 15.0% |
| !!! | AAAATTTAGTTTAATTGAAC+TGG | - | chr5.3:58719739-58719758 | MS.gene67234:intron | 15.0% |
| !!! | AAATTTAGTTTAATTGAACT+GGG | - | chr5.3:58719740-58719759 | MS.gene67234:intron | 15.0% |
| !!! | CACTTTTTGAATTATTATTT+GGG | - | chr5.3:58722234-58722253 | MS.gene67234:CDS | 15.0% |
| !!! | CTAATATTTTCTATCATTTT+TGG | + | chr5.3:58722383-58722402 | None:intergenic | 15.0% |
| !!! | GAATTTTTTGTTGAATTATT+AGG | - | chr5.3:58719636-58719655 | MS.gene67234:CDS | 15.0% |
| !!! | TCACTTTTTGAATTATTATT+TGG | - | chr5.3:58722233-58722252 | MS.gene67234:CDS | 15.0% |
| !!! | TTACTTTTTACTACTTTTTT+AGG | - | chr5.3:58719525-58719544 | MS.gene67234:CDS | 15.0% |
| !! | ATAAATCATGTACACAAAAT+AGG | + | chr5.3:58723534-58723553 | None:intergenic | 20.0% |
| !! | ATACAAGTCCAATATATATA+TGG | + | chr5.3:58721241-58721260 | None:intergenic | 20.0% |
| !! | ATATAACAGATCCTATATAT+AGG | - | chr5.3:58720472-58720491 | MS.gene67234:intron | 20.0% |
| !! | ATATATATATTGGACTTGTA+TGG | - | chr5.3:58721240-58721259 | MS.gene67234:intron | 20.0% |
| !! | ATATATCATTGTCATATGTA+CGG | - | chr5.3:58720698-58720717 | MS.gene67234:intron | 20.0% |
| !! | ATTGAGATTCTTAATGTAAA+TGG | + | chr5.3:58719428-58719447 | None:intergenic | 20.0% |
| !! | ATTTAACAAAATTAGAGAAG+AGG | + | chr5.3:58723088-58723107 | None:intergenic | 20.0% |
| !! | CATATTATAACAACATAGAT+TGG | - | chr5.3:58723806-58723825 | MS.gene67234:intron | 20.0% |
| !! | TAATATAACCAACAATAGAT+TGG | + | chr5.3:58720087-58720106 | None:intergenic | 20.0% |
| !! | TACAAGTCCAATATATATAT+GGG | + | chr5.3:58721240-58721259 | None:intergenic | 20.0% |
| !! | TAGAAAAGTAAGAAAAACAT+GGG | + | chr5.3:58719497-58719516 | None:intergenic | 20.0% |
| !! | TATAACAGATCCTATATATA+GGG | - | chr5.3:58720473-58720492 | MS.gene67234:intron | 20.0% |
| !! | TCTATGAACAAAATATTGTT+GGG | + | chr5.3:58724759-58724778 | None:intergenic | 20.0% |
| !! | TGTATTACAAAATTCAATGT+TGG | - | chr5.3:58720613-58720632 | MS.gene67234:intron | 20.0% |
| !! | TGTTAAACGTTGTTAAATAA+CGG | - | chr5.3:58724319-58724338 | MS.gene67234:intron | 20.0% |
| !! | TTAATGTAAATGGTTTGATT+TGG | + | chr5.3:58719418-58719437 | None:intergenic | 20.0% |
| !! | TTAGCAAAGTTTATAATCAT+GGG | + | chr5.3:58724963-58724982 | None:intergenic | 20.0% |
| !!! | AATAAGAACCTTTAATTTGA+TGG | - | chr5.3:58720297-58720316 | MS.gene67234:intron | 20.0% |
| !!! | ATATTATGTTTAGCTTTCTT+TGG | - | chr5.3:58721885-58721904 | MS.gene67234:intron | 20.0% |
| !!! | ATCATTGTATAACTTTTTAC+CGG | + | chr5.3:58720510-58720529 | None:intergenic | 20.0% |
| !!! | ATTCATTTTATTTTGCAATG+TGG | - | chr5.3:58723418-58723437 | MS.gene67234:intron | 20.0% |
| !!! | CTTTATATTTTAAGGATCTT+AGG | - | chr5.3:58723641-58723660 | MS.gene67234:intron | 20.0% |
| !!! | TATGGTTAGAAATTTTAACT+GGG | - | chr5.3:58719610-58719629 | MS.gene67234:CDS | 20.0% |
| !!! | TTATGGTTAGAAATTTTAAC+TGG | - | chr5.3:58719609-58719628 | MS.gene67234:CDS | 20.0% |
| !!! | TTCTCTAATTTTGTTAAATG+TGG | - | chr5.3:58723089-58723108 | MS.gene67234:intron | 20.0% |
| ! | AAACTCCATCATTCAAATTA+GGG | - | chr5.3:58723923-58723942 | MS.gene67234:intron | 25.0% |
| ! | AATGAAAAGATCAAGAAAGA+CGG | - | chr5.3:58719445-58719464 | MS.gene67234:CDS | 25.0% |
| ! | ACAAGTCCAATATATATATG+GGG | + | chr5.3:58721239-58721258 | None:intergenic | 25.0% |
| ! | AGTATATCAGTGTAATACAT+GGG | - | chr5.3:58720552-58720571 | MS.gene67234:intron | 25.0% |
| ! | ATAATCCCTAATTTGAATGA+TGG | + | chr5.3:58723931-58723950 | None:intergenic | 25.0% |
| ! | ATATAACAGATCCTATATGT+AGG | - | chr5.3:58720528-58720547 | MS.gene67234:intron | 25.0% |
| ! | ATATGTTTCAATTTAACTCG+TGG | - | chr5.3:58724602-58724621 | MS.gene67234:intron | 25.0% |
| ! | ATTGAGAGTAATATAAGAAG+AGG | - | chr5.3:58722558-58722577 | MS.gene67234:intron | 25.0% |
| ! | CAATTCAACCATCAAATTAA+AGG | + | chr5.3:58720308-58720327 | None:intergenic | 25.0% |
| ! | CAATTCACAACACTAAAATT+GGG | - | chr5.3:58724504-58724523 | MS.gene67234:intron | 25.0% |
| ! | CAGTATAACTTTAATACCAT+AGG | + | chr5.3:58721591-58721610 | None:intergenic | 25.0% |
| ! | CTCTATGAACAAAATATTGT+TGG | + | chr5.3:58724760-58724779 | None:intergenic | 25.0% |
| ! | CTTAGCAAAGTTTATAATCA+TGG | + | chr5.3:58724964-58724983 | None:intergenic | 25.0% |
| ! | GAATTCTTGGTTAAACATTA+TGG | - | chr5.3:58721785-58721804 | MS.gene67234:intron | 25.0% |
| ! | GGTTGAATTGATGAAATTAA+GGG | - | chr5.3:58720318-58720337 | MS.gene67234:intron | 25.0% |
| ! | GTACACAAATTAACAGATAT+AGG | + | chr5.3:58721614-58721633 | None:intergenic | 25.0% |
| ! | GTAGAAAAGTAAGAAAAACA+TGG | + | chr5.3:58719498-58719517 | None:intergenic | 25.0% |
| ! | TAAACTCCATCATTCAAATT+AGG | - | chr5.3:58723922-58723941 | MS.gene67234:intron | 25.0% |
| ! | TAAACTTTGCTAAGAAGTAA+TGG | - | chr5.3:58724970-58724989 | MS.gene67234:CDS | 25.0% |
| ! | TAATTTCTCTTAATGTCCAT+TGG | - | chr5.3:58721716-58721735 | MS.gene67234:intron | 25.0% |
| ! | TACAAAATTCAATGTTGGAT+GGG | - | chr5.3:58720618-58720637 | MS.gene67234:intron | 25.0% |
| ! | TACGTAATATTGTGAAATAG+CGG | - | chr5.3:58724416-58724435 | MS.gene67234:intron | 25.0% |
| ! | TATAACAGATCCTATATGTA+GGG | - | chr5.3:58720529-58720548 | MS.gene67234:intron | 25.0% |
| ! | TATAGATACTCCCTATATAT+AGG | + | chr5.3:58720486-58720505 | None:intergenic | 25.0% |
| ! | TATATCATTGTCATATGTAC+GGG | - | chr5.3:58720699-58720718 | MS.gene67234:intron | 25.0% |
| ! | TATTAGAGAAACTATCAAGA+AGG | - | chr5.3:58721001-58721020 | MS.gene67234:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr5.3:58719837-58719856 | MS.gene67234:intron | 25.0% |
| ! | TATTGCTTATTCTCTCAATA+TGG | - | chr5.3:58721438-58721457 | MS.gene67234:intron | 25.0% |
| ! | TGGTTGAATTGATGAAATTA+AGG | - | chr5.3:58720317-58720336 | MS.gene67234:intron | 25.0% |
| ! | TTACAAAATTCAATGTTGGA+TGG | - | chr5.3:58720617-58720636 | MS.gene67234:intron | 25.0% |
| ! | TTCTAATGAATGACTAGTAT+TGG | + | chr5.3:58722360-58722379 | None:intergenic | 25.0% |
| ! | TTGAGAGTAATATAAGAAGA+GGG | - | chr5.3:58722559-58722578 | MS.gene67234:intron | 25.0% |
| !! | ACCATAGGTTTTTCATAAAA+TGG | + | chr5.3:58721576-58721595 | None:intergenic | 25.0% |
| !! | ATCATTGCATAACTTTTTAC+CGG | + | chr5.3:58720454-58720473 | None:intergenic | 25.0% |
| !! | CCATAGGTTTTTCATAAAAT+GGG | + | chr5.3:58721575-58721594 | None:intergenic | 25.0% |
| !! | CGTTAGTTTCTTTATTGAAT+TGG | - | chr5.3:58724077-58724096 | MS.gene67234:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTTGT+AGG | + | chr5.3:58720993-58721012 | None:intergenic | 25.0% |
| !! | TTATAATCATGGGATTTTGA+GGG | + | chr5.3:58724953-58724972 | None:intergenic | 25.0% |
| !! | TTCTTATGCTGAATGTTTTT+AGG | - | chr5.3:58719704-58719723 | MS.gene67234:intron | 25.0% |
| !! | TTGAATTATTAGGGTAGTTT+TGG | - | chr5.3:58719646-58719665 | MS.gene67234:CDS | 25.0% |
| !! | TTTATAATCATGGGATTTTG+AGG | + | chr5.3:58724954-58724973 | None:intergenic | 25.0% |
| !! | TTTCTACCATCTTTTCTAAT+AGG | + | chr5.3:58720870-58720889 | None:intergenic | 25.0% |
| !!! | ACTACTTTTTTAGGTTACAA+CGG | - | chr5.3:58719534-58719553 | MS.gene67234:CDS | 25.0% |
| !!! | ATTTGTAGATTTTGAAGATG+AGG | - | chr5.3:58724881-58724900 | MS.gene67234:intron | 25.0% |
| !!! | CTTGTTTTTGTATGAAGTTA+CGG | - | chr5.3:58721999-58722018 | MS.gene67234:intron | 25.0% |
| !!! | TCGTTGAATAACTTTTTTAC+TGG | - | chr5.3:58720585-58720604 | MS.gene67234:intron | 25.0% |
| !!! | TTGTTTTTGTATGAAGTTAC+GGG | - | chr5.3:58722000-58722019 | MS.gene67234:intron | 25.0% |
| !!! | TTTGAAATCTTTTGTCATGT+TGG | - | chr5.3:58721908-58721927 | MS.gene67234:intron | 25.0% |
| !!! | TTTTAGAAGCATATCATTGA+TGG | + | chr5.3:58722048-58722067 | None:intergenic | 25.0% |
| AAAAAGAAACAAGAGGAGAA+AGG | - | chr5.3:58722166-58722185 | MS.gene67234:intron | 30.0% | |
| AAAACGTGATAAAACACAAC+AGG | + | chr5.3:58721649-58721668 | None:intergenic | 30.0% | |
| AAATGTACTCTTATATCAGC+AGG | - | chr5.3:58724692-58724711 | MS.gene67234:intron | 30.0% | |
| AACTTGCAAACAAAGACTAA+AGG | + | chr5.3:58722421-58722440 | None:intergenic | 30.0% | |
| AAGAATGAGAATGAAAGATG+TGG | - | chr5.3:58721947-58721966 | MS.gene67234:intron | 30.0% | |
| AATTTGCCTTATGAAACTAC+CGG | - | chr5.3:58724780-58724799 | MS.gene67234:intron | 30.0% | |
| AGATTGTATTGCTAAAGAAG+AGG | - | chr5.3:58722120-58722139 | MS.gene67234:intron | 30.0% | |
| AGTAATATAAGAAGAGGGAA+AGG | - | chr5.3:58722564-58722583 | MS.gene67234:intron | 30.0% | |
| ATATTGTGAAATAGCGGTTA+TGG | - | chr5.3:58724422-58724441 | MS.gene67234:intron | 30.0% | |
| ATTGTGTCTCATATATTGCT+TGG | - | chr5.3:58722828-58722847 | MS.gene67234:CDS | 30.0% | |
| CAAAAATAAGCCATCCAAAT+GGG | - | chr5.3:58719967-58719986 | MS.gene67234:intron | 30.0% | |
| CATTGCAATCTCATTATCTT+CGG | + | chr5.3:58723327-58723346 | None:intergenic | 30.0% | |
| CGAAAATAAGTCAATCCAAA+CGG | + | chr5.3:58719789-58719808 | None:intergenic | 30.0% | |
| GAAAAACATGGGAATGTAAA+TGG | + | chr5.3:58719486-58719505 | None:intergenic | 30.0% | |
| GAAATGACAACATTAGAGAA+AGG | - | chr5.3:58720834-58720853 | MS.gene67234:intron | 30.0% | |
| GAGTATATCAGTGTAATACA+TGG | - | chr5.3:58720551-58720570 | MS.gene67234:intron | 30.0% | |
| GATTGCAATGTTCTGTTATA+CGG | - | chr5.3:58723337-58723356 | MS.gene67234:intron | 30.0% | |
| GATTGTATTGCTAAAGAAGA+GGG | - | chr5.3:58722121-58722140 | MS.gene67234:intron | 30.0% | |
| GCAATTCACAACACTAAAAT+TGG | - | chr5.3:58724503-58724522 | MS.gene67234:intron | 30.0% | |
| GCGTATTATGTATGAGAAAA+GGG | - | chr5.3:58719989-58720008 | MS.gene67234:intron | 30.0% | |
| TAACCAAGAATTCTTACAAG+CGG | + | chr5.3:58721778-58721797 | None:intergenic | 30.0% | |
| TCAAAAAGTGAGGATGATTA+TGG | + | chr5.3:58722224-58722243 | None:intergenic | 30.0% | |
| TCAAAAATAAGCCATCCAAA+TGG | - | chr5.3:58719966-58719985 | MS.gene67234:intron | 30.0% | |
| TCTCTACTCAACAAATTATG+AGG | + | chr5.3:58723043-58723062 | None:intergenic | 30.0% | |
| TTAATCTTGACGTATGATAG+AGG | - | chr5.3:58721206-58721225 | MS.gene67234:intron | 30.0% | |
| TTACGTACTAAATAGCGTAT+CGG | + | chr5.3:58724403-58724422 | None:intergenic | 30.0% | |
| TTCAGAGGGATAAATGATAA+TGG | + | chr5.3:58722279-58722298 | None:intergenic | 30.0% | |
| TTGAATTGCCAATCTATTGT+TGG | - | chr5.3:58720076-58720095 | MS.gene67234:intron | 30.0% | |
| TTTGCAAGTTAGGAGATAAA+GGG | - | chr5.3:58722431-58722450 | MS.gene67234:intron | 30.0% | |
| ! | AATAGCAGTTTGTTCAAACT+CGG | + | chr5.3:58724472-58724491 | None:intergenic | 30.0% |
| ! | CAAAATTAGAGAAGAGGTAT+AGG | + | chr5.3:58723082-58723101 | None:intergenic | 30.0% |
| ! | CATAACTTTTTACCGGATAT+AGG | + | chr5.3:58720447-58720466 | None:intergenic | 30.0% |
| ! | CCCATTTTATGAAAAACCTA+TGG | - | chr5.3:58721572-58721591 | MS.gene67234:intron | 30.0% |
| ! | TATAATCATGGGATTTTGAG+GGG | + | chr5.3:58724952-58724971 | None:intergenic | 30.0% |
| ! | TTAGTCTTTGTTTGCAAGTT+AGG | - | chr5.3:58722421-58722440 | MS.gene67234:intron | 30.0% |
| ! | TTGCTCTTGATTTTCCATTT+CGG | - | chr5.3:58721266-58721285 | MS.gene67234:intron | 30.0% |
| ! | TTTTGAGCTAACCTATCATT+AGG | - | chr5.3:58723123-58723142 | MS.gene67234:intron | 30.0% |
| !! | ATATAGGGAGTATCTATATC+CGG | - | chr5.3:58720488-58720507 | MS.gene67234:intron | 30.0% |
| !! | ATGTAAATGGTTTGATTTGG+AGG | + | chr5.3:58719415-58719434 | None:intergenic | 30.0% |
| !! | TGTTTTTGTATGAAGTTACG+GGG | - | chr5.3:58722001-58722020 | MS.gene67234:intron | 30.0% |
| !! | TTATTTTATGAAGTCTCGCA+TGG | - | chr5.3:58720235-58720254 | MS.gene67234:intron | 30.0% |
| !! | TTGGGGTTTATTTTCTTCAT+AGG | + | chr5.3:58722676-58722695 | None:intergenic | 30.0% |
| !! | TTGGTTCTGATTGGTTTATT+TGG | - | chr5.3:58723248-58723267 | MS.gene67234:intron | 30.0% |
| !!! | GTAATTGGATTTTGTTTTGC+TGG | - | chr5.3:58721298-58721317 | MS.gene67234:intron | 30.0% |
| AAACAATCTTCTGTGCCTAA+TGG | - | chr5.3:58724176-58724195 | MS.gene67234:intron | 35.0% | |
| AAACTAGACTTAGGTGGTTT+GGG | - | chr5.3:58720887-58720906 | MS.gene67234:intron | 35.0% | |
| AAATCCAGTGATGGTAGTTA+AGG | + | chr5.3:58723298-58723317 | None:intergenic | 35.0% | |
| AAATCTACAAATGCGATACC+TGG | + | chr5.3:58724873-58724892 | None:intergenic | 35.0% | |
| AACACTAAAATTGGGTCATC+GGG | - | chr5.3:58724512-58724531 | MS.gene67234:intron | 35.0% | |
| AAGGAAGAAGGAAAGAGAAA+TGG | + | chr5.3:58723962-58723981 | None:intergenic | 35.0% | |
| ACAAGATCAGAAAGTGATGA+TGG | + | chr5.3:58724043-58724062 | None:intergenic | 35.0% | |
| ACAGAATTCATGATGTCCAA+TGG | + | chr5.3:58721735-58721754 | None:intergenic | 35.0% | |
| ACAGCTTAACAGTTTATGTC+TGG | + | chr5.3:58723616-58723635 | None:intergenic | 35.0% | |
| ACATGAATTGAGAGAAGACT+TGG | + | chr5.3:58722624-58722643 | None:intergenic | 35.0% | |
| ACTACAAAATCCCCCATATT+TGG | + | chr5.3:58723891-58723910 | None:intergenic | 35.0% | |
| AGATGGTAGAAACTAGACTT+AGG | - | chr5.3:58720878-58720897 | MS.gene67234:intron | 35.0% | |
| AGTCAAATCACTAGAGGTAA+GGG | - | chr5.3:58720963-58720982 | MS.gene67234:intron | 35.0% | |
| AGTTAGGAGAGTAGATTAGT+GGG | - | chr5.3:58720939-58720958 | MS.gene67234:intron | 35.0% | |
| ATAAGAAGAGGGAAAGGATA+TGG | - | chr5.3:58722570-58722589 | MS.gene67234:intron | 35.0% | |
| ATTACGTTGCTTGAGAGTTA+TGG | - | chr5.3:58719592-58719611 | MS.gene67234:CDS | 35.0% | |
| CAACACTAAAATTGGGTCAT+CGG | - | chr5.3:58724511-58724530 | MS.gene67234:intron | 35.0% | |
| CAAGATCAGAAAGTGATGAT+GGG | + | chr5.3:58724042-58724061 | None:intergenic | 35.0% | |
| CTAACTCCCAAAAAAACCTT+CGG | - | chr5.3:58722733-58722752 | MS.gene67234:intron | 35.0% | |
| CTACAAAATCCCCCATATTT+GGG | + | chr5.3:58723890-58723909 | None:intergenic | 35.0% | |
| CTGATATACTCCCTACATAT+AGG | + | chr5.3:58720542-58720561 | None:intergenic | 35.0% | |
| GAACTCAAGAAATGTATTGG+AGG | + | chr5.3:58723866-58723885 | None:intergenic | 35.0% | |
| GAGGATGATTATGGTTTGAA+AGG | + | chr5.3:58722215-58722234 | None:intergenic | 35.0% | |
| GCTTATTCTCTCAATATGGA+AGG | - | chr5.3:58721442-58721461 | MS.gene67234:intron | 35.0% | |
| GGAGAAGAAAAAGAAACAAG+AGG | - | chr5.3:58722159-58722178 | MS.gene67234:intron | 35.0% | |
| GGATCTAGATATCAATGAGT+TGG | - | chr5.3:58721022-58721041 | MS.gene67234:intron | 35.0% | |
| GGCGTATTATGTATGAGAAA+AGG | - | chr5.3:58719988-58720007 | MS.gene67234:intron | 35.0% | |
| GTAAACTCTATGCAATCTAG+AGG | + | chr5.3:58724296-58724315 | None:intergenic | 35.0% | |
| GTAGCACCTATTAGAAAAGA+TGG | - | chr5.3:58720861-58720880 | MS.gene67234:intron | 35.0% | |
| GTTCAACTGAACCATATTTC+TGG | - | chr5.3:58723224-58723243 | MS.gene67234:intron | 35.0% | |
| GTTTGCAAGTTAGGAGATAA+AGG | - | chr5.3:58722430-58722449 | MS.gene67234:intron | 35.0% | |
| GTTTGTTTGGGAGTTAAAGA+GGG | + | chr5.3:58724005-58724024 | None:intergenic | 35.0% | |
| TACAAAATCCCCCATATTTG+GGG | + | chr5.3:58723889-58723908 | None:intergenic | 35.0% | |
| TACGTACTAAATAGCGTATC+GGG | + | chr5.3:58724402-58724421 | None:intergenic | 35.0% | |
| TAGTTAGGAGAGTAGATTAG+TGG | - | chr5.3:58720938-58720957 | MS.gene67234:intron | 35.0% | |
| TCAGAACCAAACCAGAAATA+TGG | + | chr5.3:58723238-58723257 | None:intergenic | 35.0% | |
| TCATACATAATACGCCCATT+TGG | + | chr5.3:58719984-58720003 | None:intergenic | 35.0% | |
| TCTAAAAACACACCCAAACA+AGG | + | chr5.3:58722496-58722515 | None:intergenic | 35.0% | |
| TCTTACAAGCGGCTATATTT+GGG | + | chr5.3:58721767-58721786 | None:intergenic | 35.0% | |
| TGATACAGGTATCCTATATC+CGG | - | chr5.3:58720432-58720451 | MS.gene67234:intron | 35.0% | |
| TTCTTACAAGCGGCTATATT+TGG | + | chr5.3:58721768-58721787 | None:intergenic | 35.0% | |
| TTTGTTTGGGAGTTAAAGAG+GGG | + | chr5.3:58724004-58724023 | None:intergenic | 35.0% | |
| ! | AATGTATTGGAGGAAGCTTT+TGG | + | chr5.3:58723856-58723875 | None:intergenic | 35.0% |
| ! | ACTGAGCAGAATTAGTTCTT+TGG | + | chr5.3:58723176-58723195 | None:intergenic | 35.0% |
| ! | ATAGGTTAGCTCAAAAAGCT+TGG | + | chr5.3:58723119-58723138 | None:intergenic | 35.0% |
| ! | CTCTCAATATGGAAGGATTT+TGG | - | chr5.3:58721449-58721468 | MS.gene67234:intron | 35.0% |
| ! | GAGAAGACTTGGAAATGTTT+TGG | + | chr5.3:58722613-58722632 | None:intergenic | 35.0% |
| ! | GCATACTTAAGGGTTTGTTT+GGG | + | chr5.3:58724017-58724036 | None:intergenic | 35.0% |
| ! | TATCATTTATCCCTCTGAAG+TGG | - | chr5.3:58722280-58722299 | MS.gene67234:intron | 35.0% |
| ! | TGCTCTTGATTTTCCATTTC+GGG | - | chr5.3:58721267-58721286 | MS.gene67234:intron | 35.0% |
| ! | TGTTTCTTTTTCTTCTCCCT+TGG | + | chr5.3:58722157-58722176 | None:intergenic | 35.0% |
| ! | TTGGAGAAAGACATGGTTTT+CGG | - | chr5.3:58721041-58721060 | MS.gene67234:intron | 35.0% |
| ! | TTTTTGCTGGAGAGAAAATC+AGG | + | chr5.3:58724268-58724287 | None:intergenic | 35.0% |
| !! | AACTGTGAGTTTTGTGATAC+AGG | - | chr5.3:58720418-58720437 | MS.gene67234:intron | 35.0% |
| !! | ACTGAACCATATTTCTGGTT+TGG | - | chr5.3:58723229-58723248 | MS.gene67234:intron | 35.0% |
| !! | ATTTCTGGTTTGGTTCTGAT+TGG | - | chr5.3:58723239-58723258 | MS.gene67234:intron | 35.0% |
| !! | CCTAGTTTTCCATATTGTGT+GGG | + | chr5.3:58723508-58723527 | None:intergenic | 35.0% |
| !! | TGTTCTATTTGTTGTCGTTG+TGG | - | chr5.3:58721395-58721414 | MS.gene67234:intron | 35.0% |
| !!! | AATGCATCCGAAGGTTTTTT+TGG | + | chr5.3:58722743-58722762 | None:intergenic | 35.0% |
| !!! | ATGCATCCGAAGGTTTTTTT+GGG | + | chr5.3:58722742-58722761 | None:intergenic | 35.0% |
| !!! | ATTTTGTTTTGCTGGTCTTG+GGG | - | chr5.3:58721306-58721325 | MS.gene67234:intron | 35.0% |
| !!! | GATTTTGTTTTGCTGGTCTT+GGG | - | chr5.3:58721305-58721324 | MS.gene67234:intron | 35.0% |
| !!! | GGTAGTTTTGGATTTGTGTT+AGG | - | chr5.3:58719658-58719677 | MS.gene67234:intron | 35.0% |
| !!! | TTGTTTGGGTGTGTTTTTAG+AGG | - | chr5.3:58722495-58722514 | MS.gene67234:intron | 35.0% |
| !!! | TTTTAGGTTACAACGGTTCT+TGG | - | chr5.3:58719541-58719560 | MS.gene67234:CDS | 35.0% |
| AACAGACATTACCACTTCAG+AGG | + | chr5.3:58722294-58722313 | None:intergenic | 40.0% | |
| AAGAGGAGAAAGGTGAAGAA+TGG | - | chr5.3:58722176-58722195 | MS.gene67234:intron | 40.0% | |
| AATTAAGCGTAGCAGAGATG+AGG | - | chr5.3:58720760-58720779 | MS.gene67234:intron | 40.0% | |
| ACAAAATCCCCCATATTTGG+GGG | + | chr5.3:58723888-58723907 | None:intergenic | 40.0% | |
| ACAGACATTACCACTTCAGA+GGG | + | chr5.3:58722293-58722312 | None:intergenic | 40.0% | |
| ACATAATACGCCCATTTGGA+TGG | + | chr5.3:58719980-58719999 | None:intergenic | 40.0% | |
| ACCAGAACAGACCTAATGAT+AGG | + | chr5.3:58723137-58723156 | None:intergenic | 40.0% | |
| ACCTATCATTAGGTCTGTTC+TGG | - | chr5.3:58723133-58723152 | MS.gene67234:intron | 40.0% | |
| ACGTACTAAATAGCGTATCG+GGG | + | chr5.3:58724401-58724420 | None:intergenic | 40.0% | |
| AGAAAATAAACCCCAACGCA+AGG | - | chr5.3:58722680-58722699 | MS.gene67234:intron | 40.0% | |
| AGGATGTTGCATACTTGCAT+TGG | - | chr5.3:58720780-58720799 | MS.gene67234:intron | 40.0% | |
| ATTACAATATCCCCCCGAAA+TGG | + | chr5.3:58721283-58721302 | None:intergenic | 40.0% | |
| CAATAGTAGTCAACATGTCG+CGG | - | chr5.3:58723383-58723402 | MS.gene67234:intron | 40.0% | |
| CACTGTAAGATAACTTGAGC+AGG | + | chr5.3:58721679-58721698 | None:intergenic | 40.0% | |
| CAGTGATGGTAGTTAAGGTT+GGG | + | chr5.3:58723293-58723312 | None:intergenic | 40.0% | |
| CCCACACAATATGGAAAACT+AGG | - | chr5.3:58723505-58723524 | MS.gene67234:intron | 40.0% | |
| CGTCTGATATGCAACTAACT+TGG | - | chr5.3:58723197-58723216 | MS.gene67234:intron | 40.0% | |
| CTACCATCACTGGATTTCAT+TGG | - | chr5.3:58723301-58723320 | MS.gene67234:intron | 40.0% | |
| CTCGGTCCCCATATATATAT+TGG | - | chr5.3:58721230-58721249 | MS.gene67234:intron | 40.0% | |
| GAAACTAGACTTAGGTGGTT+TGG | - | chr5.3:58720886-58720905 | MS.gene67234:intron | 40.0% | |
| GAGTCAAATCACTAGAGGTA+AGG | - | chr5.3:58720962-58720981 | MS.gene67234:intron | 40.0% | |
| GGGGAACTCAAGAAATGTAT+TGG | + | chr5.3:58723869-58723888 | None:intergenic | 40.0% | |
| GTGAGTATGTGAGAAAGAGA+GGG | - | chr5.3:58722997-58723016 | MS.gene67234:intron | 40.0% | |
| GTGTCTCATATATTGCTTGG+TGG | - | chr5.3:58722831-58722850 | MS.gene67234:CDS | 40.0% | |
| GTGTTGTGAATTGCAGATTG+TGG | + | chr5.3:58724497-58724516 | None:intergenic | 40.0% | |
| GTTAGGAGAGTAGATTAGTG+GGG | - | chr5.3:58720940-58720959 | MS.gene67234:intron | 40.0% | |
| TAGCCGCTTGTAAGAATTCT+TGG | - | chr5.3:58721772-58721791 | MS.gene67234:intron | 40.0% | |
| TAGGACTAAAACCCCCAATA+TGG | + | chr5.3:58722657-58722676 | None:intergenic | 40.0% | |
| TCGAAGAGTAACTTTGAGCA+GGG | + | chr5.3:58720371-58720390 | None:intergenic | 40.0% | |
| TCTGTACAGCTGAGAAAAAG+AGG | - | chr5.3:58724138-58724157 | MS.gene67234:intron | 40.0% | |
| TCTTGAGTTCCCCCAAATAT+GGG | - | chr5.3:58723876-58723895 | MS.gene67234:intron | 40.0% | |
| TGAACTGGGCATTTCTTAGT+TGG | - | chr5.3:58719754-58719773 | MS.gene67234:intron | 40.0% | |
| TGAGTATGTGAGAAAGAGAG+GGG | - | chr5.3:58722998-58723017 | MS.gene67234:intron | 40.0% | |
| TGCTTAGGGTAAAAGGAAGA+AGG | + | chr5.3:58723974-58723993 | None:intergenic | 40.0% | |
| TGGTAGAAACTAGACTTAGG+TGG | - | chr5.3:58720881-58720900 | MS.gene67234:intron | 40.0% | |
| TGTCATATGTACGGGACAAA+GGG | - | chr5.3:58720707-58720726 | MS.gene67234:intron | 40.0% | |
| TGTGAGTATGTGAGAAAGAG+AGG | - | chr5.3:58722996-58723015 | MS.gene67234:intron | 40.0% | |
| TTCTTGAGTTCCCCCAAATA+TGG | - | chr5.3:58723875-58723894 | MS.gene67234:intron | 40.0% | |
| TTGACGTATGATAGAGGACT+CGG | - | chr5.3:58721212-58721231 | MS.gene67234:intron | 40.0% | |
| TTGTCATATGTACGGGACAA+AGG | - | chr5.3:58720706-58720725 | MS.gene67234:intron | 40.0% | |
| TTGTGAAATAGCGGTTATGG+AGG | - | chr5.3:58724425-58724444 | MS.gene67234:intron | 40.0% | |
| TTTCGGGGGGATATTGTAAT+TGG | - | chr5.3:58721283-58721302 | MS.gene67234:intron | 40.0% | |
| ! | AGTTTTCCATATTGTGTGGG+AGG | + | chr5.3:58723505-58723524 | None:intergenic | 40.0% |
| ! | ATGATGGGAGGCATACTTAA+GGG | + | chr5.3:58724027-58724046 | None:intergenic | 40.0% |
| ! | ATGTTCGAGTTCCTCCATAT+TGG | - | chr5.3:58722640-58722659 | MS.gene67234:intron | 40.0% |
| ! | CAATGAGTTGGAGAAAGACA+TGG | - | chr5.3:58721034-58721053 | MS.gene67234:intron | 40.0% |
| ! | CGAACAATACCCAGGTTTTA+AGG | - | chr5.3:58724824-58724843 | MS.gene67234:intron | 40.0% |
| ! | CTCTTGATTTTCCATTTCGG+GGG | - | chr5.3:58721269-58721288 | MS.gene67234:intron | 40.0% |
| ! | GCTCTTGATTTTCCATTTCG+GGG | - | chr5.3:58721268-58721287 | MS.gene67234:intron | 40.0% |
| ! | GGCATACTTAAGGGTTTGTT+TGG | + | chr5.3:58724018-58724037 | None:intergenic | 40.0% |
| ! | GGTTTGTTTGGGAGTTAAAG+AGG | + | chr5.3:58724006-58724025 | None:intergenic | 40.0% |
| ! | GTTTTCCATATTGTGTGGGA+GGG | + | chr5.3:58723504-58723523 | None:intergenic | 40.0% |
| ! | TATTGGAGGAAGCTTTTGGA+GGG | + | chr5.3:58723852-58723871 | None:intergenic | 40.0% |
| ! | TCTAGAGGCAAAGTTTTTGC+TGG | + | chr5.3:58724281-58724300 | None:intergenic | 40.0% |
| ! | TCTTGATTTTCCATTTCGGG+GGG | - | chr5.3:58721270-58721289 | MS.gene67234:intron | 40.0% |
| ! | TGGGGGATTTTGTAGTATGA+AGG | - | chr5.3:58723895-58723914 | MS.gene67234:intron | 40.0% |
| ! | TGGTTTTCGGTAGAACACTA+TGG | - | chr5.3:58721054-58721073 | MS.gene67234:intron | 40.0% |
| ! | TGTTCGAGTTCCTCCATATT+GGG | - | chr5.3:58722641-58722660 | MS.gene67234:intron | 40.0% |
| !! | GCCTAGTTTTCCATATTGTG+TGG | + | chr5.3:58723509-58723528 | None:intergenic | 40.0% |
| !!! | ACATGGGGTGGATTTTTTCT+AGG | + | chr5.3:58723480-58723499 | None:intergenic | 40.0% |
| !!! | AGGTTTTTTTGGGAGTTAGG+TGG | + | chr5.3:58722732-58722751 | None:intergenic | 40.0% |
| !!! | CGAAGGTTTTTTTGGGAGTT+AGG | + | chr5.3:58722735-58722754 | None:intergenic | 40.0% |
| !!! | GGATTTTGTTTTGCTGGTCT+TGG | - | chr5.3:58721304-58721323 | MS.gene67234:intron | 40.0% |
| !!! | TTTTGTTTTGCTGGTCTTGG+GGG | - | chr5.3:58721307-58721326 | MS.gene67234:intron | 40.0% |
| AAAGGGAGGTGAGAGCTTTA+GGG | - | chr5.3:58722448-58722467 | MS.gene67234:intron | 45.0% | |
| AAATAAACCCCAACGCAAGG+TGG | - | chr5.3:58722683-58722702 | MS.gene67234:intron | 45.0% | |
| AAGCGCACTTCCTTAAAACC+TGG | + | chr5.3:58724837-58724856 | None:intergenic | 45.0% | |
| AATAAACCCCAACGCAAGGT+GGG | - | chr5.3:58722684-58722703 | MS.gene67234:intron | 45.0% | |
| ACAATCATCCATGGCAATGC+AGG | - | chr5.3:58724905-58724924 | MS.gene67234:intron | 45.0% | |
| ACACATGGTGCAAGTAATGG+TGG | - | chr5.3:58724203-58724222 | MS.gene67234:intron | 45.0% | |
| AGATGAGGCACAATCATCCA+TGG | - | chr5.3:58724896-58724915 | MS.gene67234:intron | 45.0% | |
| AGCGCACTTCCTTAAAACCT+GGG | + | chr5.3:58724836-58724855 | None:intergenic | 45.0% | |
| AGTTGGACAATGTGTCCGTT+TGG | - | chr5.3:58719771-58719790 | MS.gene67234:intron | 45.0% | |
| ATATTGTGTGGGAGGGAACA+TGG | + | chr5.3:58723497-58723516 | None:intergenic | 45.0% | |
| ATCCTGCCGGTAGTTTCATA+AGG | + | chr5.3:58724789-58724808 | None:intergenic | 45.0% | |
| ATGCTCTTCGAACAATACCC+AGG | - | chr5.3:58724816-58724835 | MS.gene67234:intron | 45.0% | |
| ATGTTCCCTCCCACACAATA+TGG | - | chr5.3:58723496-58723515 | MS.gene67234:intron | 45.0% | |
| CAAACTCGGCTACACAACAA+TGG | + | chr5.3:58724458-58724477 | None:intergenic | 45.0% | |
| CAATCTTCTGTGCCTAATGG+TGG | - | chr5.3:58724179-58724198 | MS.gene67234:intron | 45.0% | |
| CCAACCTTAACTACCATCAC+TGG | - | chr5.3:58723291-58723310 | MS.gene67234:intron | 45.0% | |
| CCAGTGATGGTAGTTAAGGT+TGG | + | chr5.3:58723294-58723313 | None:intergenic | 45.0% | |
| CTCGAAGAGTAACTTTGAGC+AGG | + | chr5.3:58720372-58720391 | None:intergenic | 45.0% | |
| CTCTAGTTGCGAGTTTGTAG+TGG | - | chr5.3:58723664-58723683 | MS.gene67234:intron | 45.0% | |
| CTTGAGTTCCCCCAAATATG+GGG | - | chr5.3:58723877-58723896 | MS.gene67234:intron | 45.0% | |
| GACAACATTAGAGAAAGGCG+AGG | - | chr5.3:58720839-58720858 | MS.gene67234:intron | 45.0% | |
| GACTAAAACCCCCAATATGG+AGG | + | chr5.3:58722654-58722673 | None:intergenic | 45.0% | |
| GATGTGTGGTAAGACTAGAC+TGG | - | chr5.3:58720802-58720821 | MS.gene67234:intron | 45.0% | |
| GCAAGTTAGGAGATAAAGGG+AGG | - | chr5.3:58722434-58722453 | MS.gene67234:intron | 45.0% | |
| GCATACTTGCATTGGATGTG+TGG | - | chr5.3:58720788-58720807 | MS.gene67234:intron | 45.0% | |
| GGAACACATGGTGCAAGTAA+TGG | - | chr5.3:58724200-58724219 | MS.gene67234:intron | 45.0% | |
| TAAAGGGAGGTGAGAGCTTT+AGG | - | chr5.3:58722447-58722466 | MS.gene67234:intron | 45.0% | |
| TAACGGCTACAGTAGTGCTA+TGG | - | chr5.3:58724336-58724355 | MS.gene67234:intron | 45.0% | |
| TAGTTGCGAGTTTGTAGTGG+AGG | - | chr5.3:58723667-58723686 | MS.gene67234:intron | 45.0% | |
| TATGTACGGGACAAAGGGTT+TGG | - | chr5.3:58720712-58720731 | MS.gene67234:intron | 45.0% | |
| TATGTGAGAAAGAGAGGGGA+GGG | - | chr5.3:58723002-58723021 | MS.gene67234:intron | 45.0% | |
| TATTGTGTGGGAGGGAACAT+GGG | + | chr5.3:58723496-58723515 | None:intergenic | 45.0% | |
| TTGAGTTCCCCCAAATATGG+GGG | - | chr5.3:58723878-58723897 | MS.gene67234:intron | 45.0% | |
| ! | AGTTGCGAGTTTGTAGTGGA+GGG | - | chr5.3:58723668-58723687 | MS.gene67234:intron | 45.0% |
| ! | CGCGACATGTTGACTACTAT+TGG | + | chr5.3:58723385-58723404 | None:intergenic | 45.0% |
| ! | GTATTGGAGGAAGCTTTTGG+AGG | + | chr5.3:58723853-58723872 | None:intergenic | 45.0% |
| ! | GTTCGAGTTCCTCCATATTG+GGG | - | chr5.3:58722642-58722661 | MS.gene67234:intron | 45.0% |
| ! | TGTGTCTGAAATGCATCCGA+AGG | + | chr5.3:58722752-58722771 | None:intergenic | 45.0% |
| ! | TTCGAGTTCCTCCATATTGG+GGG | - | chr5.3:58722643-58722662 | MS.gene67234:intron | 45.0% |
| !! | AAGAGGGAAGCTTTGTTCCA+AGG | - | chr5.3:58722137-58722156 | MS.gene67234:intron | 45.0% |
| !! | AGAGGGAAGCTTTGTTCCAA+GGG | - | chr5.3:58722138-58722157 | MS.gene67234:intron | 45.0% |
| !! | AGGAGAGTGCTTAGGGTAAA+AGG | + | chr5.3:58723981-58724000 | None:intergenic | 45.0% |
| !! | GATCAGAAAGTGATGATGGG+AGG | + | chr5.3:58724039-58724058 | None:intergenic | 45.0% |
| !! | GATGATGGGAGGCATACTTA+AGG | + | chr5.3:58724028-58724047 | None:intergenic | 45.0% |
| !!! | GGGGTGGATTTTTTCTAGGT+GGG | + | chr5.3:58723476-58723495 | None:intergenic | 45.0% |
| !!! | GGGTGGATTTTTTCTAGGTG+GGG | + | chr5.3:58723475-58723494 | None:intergenic | 45.0% |
| !!! | GGTGGATTTTTTCTAGGTGG+GGG | + | chr5.3:58723474-58723493 | None:intergenic | 45.0% |
| !!! | TGGGGTGGATTTTTTCTAGG+TGG | + | chr5.3:58723477-58723496 | None:intergenic | 45.0% |
| !!! | TTTTTTCTAGGTGGGGGATG+AGG | + | chr5.3:58723468-58723487 | None:intergenic | 45.0% |
| AAACACACCCAAACAAGGCG+AGG | + | chr5.3:58722491-58722510 | None:intergenic | 50.0% | |
| ATAAACCCCAACGCAAGGTG+GGG | - | chr5.3:58722685-58722704 | MS.gene67234:intron | 50.0% | |
| ATAGTTCCCCACCTTGCGTT+GGG | + | chr5.3:58722694-58722713 | None:intergenic | 50.0% | |
| ATGGCAATGCAGGCTCTACA+AGG | - | chr5.3:58724915-58724934 | MS.gene67234:intron | 50.0% | |
| ATTGTGTGGGAGGGAACATG+GGG | + | chr5.3:58723495-58723514 | None:intergenic | 50.0% | |
| CATCTGTCGCACTGCATTAC+TGG | + | chr5.3:58721544-58721563 | None:intergenic | 50.0% | |
| CGGCCAATGAAATCCAGTGA+TGG | + | chr5.3:58723307-58723326 | None:intergenic | 50.0% | |
| CTAAAGACGCCTAAGCTTCG+AGG | - | chr5.3:58721483-58721502 | MS.gene67234:intron | 50.0% | |
| GAGTTAGGTGGAGACAGGAA+AGG | + | chr5.3:58722720-58722739 | None:intergenic | 50.0% | |
| GCACCATGTGTTCCACCATT+AGG | + | chr5.3:58724194-58724213 | None:intergenic | 50.0% | |
| GCATGTAGAGAGAAGACCTG+GGG | - | chr5.3:58720909-58720928 | MS.gene67234:intron | 50.0% | |
| GCTATGGCGCTATTGCATAG+CGG | - | chr5.3:58724352-58724371 | MS.gene67234:intron | 50.0% | |
| GGCATGTAGAGAGAAGACCT+GGG | - | chr5.3:58720908-58720927 | MS.gene67234:intron | 50.0% | |
| GTATGTGAGAAAGAGAGGGG+AGG | - | chr5.3:58723001-58723020 | MS.gene67234:intron | 50.0% | |
| GTGGGGAGTCAAATCACTAG+AGG | - | chr5.3:58720957-58720976 | MS.gene67234:intron | 50.0% | |
| GTTTGGGAGTTAAAGAGGGG+AGG | + | chr5.3:58724001-58724020 | None:intergenic | 50.0% | |
| TAAGCTTCGAGGACAGGCAT+GGG | - | chr5.3:58721494-58721513 | MS.gene67234:intron | 50.0% | |
| TACGGGACAAAGGGTTTGGA+CGG | - | chr5.3:58720716-58720735 | MS.gene67234:intron | 50.0% | |
| TGCCTTATGAAACTACCGGC+AGG | - | chr5.3:58724784-58724803 | MS.gene67234:intron | 50.0% | |
| TTAGAGGTGAGCAGTCGAGA+AGG | - | chr5.3:58722511-58722530 | MS.gene67234:intron | 50.0% | |
| TTGTAGAGCCTGCATTGCCA+TGG | + | chr5.3:58724916-58724935 | None:intergenic | 50.0% | |
| TTTGGGAGTTAGGTGGAGAC+AGG | + | chr5.3:58722725-58722744 | None:intergenic | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | + | chr5.3:58721103-58721122 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | + | chr5.3:58721104-58721123 | None:intergenic | 50.0% |
| ! | GTGCCTAATGGTGGAACACA+TGG | - | chr5.3:58724188-58724207 | MS.gene67234:intron | 50.0% |
| !! | AGAGCTTTAGGGAGAGACGA+GGG | - | chr5.3:58722459-58722478 | MS.gene67234:intron | 50.0% |
| !! | GGGAATACCTCGCCTTGTTT+GGG | - | chr5.3:58722481-58722500 | MS.gene67234:intron | 50.0% |
| AAAGAGAGGGGAGGGAAGAG+GGG | - | chr5.3:58723010-58723029 | MS.gene67234:intron | 55.0% | |
| AGAAAGAGAGGGGAGGGAAG+AGG | - | chr5.3:58723008-58723027 | MS.gene67234:intron | 55.0% | |
| CATGCCTGTCCTCGAAGCTT+AGG | + | chr5.3:58721495-58721514 | None:intergenic | 55.0% | |
| CGCTTGATCGAAGCAAAGCC+AGG | - | chr5.3:58724852-58724871 | MS.gene67234:intron | 55.0% | |
| CTAAGCTTCGAGGACAGGCA+TGG | - | chr5.3:58721493-58721512 | MS.gene67234:intron | 55.0% | |
| CTCCTAACTACAGCATCCCC+AGG | + | chr5.3:58720928-58720947 | None:intergenic | 55.0% | |
| CTTATCCCACCAAGTGGGGT+CGG | + | chr5.3:58721099-58721118 | None:intergenic | 55.0% | |
| GAAAGAGAGGGGAGGGAAGA+GGG | - | chr5.3:58723009-58723028 | MS.gene67234:intron | 55.0% | |
| GACCTGGGGATGCTGTAGTT+AGG | - | chr5.3:58720923-58720942 | MS.gene67234:intron | 55.0% | |
| GAGCATTTCGAGCATCCTGC+CGG | + | chr5.3:58724802-58724821 | None:intergenic | 55.0% | |
| GATAGTTCCCCACCTTGCGT+TGG | + | chr5.3:58722695-58722714 | None:intergenic | 55.0% | |
| GGGCATGTAGAGAGAAGACC+TGG | - | chr5.3:58720907-58720926 | MS.gene67234:intron | 55.0% | |
| GGTTGGGCACAGTTCAGTTC+AGG | + | chr5.3:58723277-58723296 | None:intergenic | 55.0% | |
| GTGGGGGATGAGGAAACTGA+TGG | + | chr5.3:58723458-58723477 | None:intergenic | 55.0% | |
| TAGTTCCCCACCTTGCGTTG+GGG | + | chr5.3:58722693-58722712 | None:intergenic | 55.0% | |
| TCGAGAAGGAGGCTTACGAG+TGG | - | chr5.3:58722525-58722544 | MS.gene67234:intron | 55.0% | |
| TGTATGTAGCCGACCCCACT+TGG | - | chr5.3:58721087-58721106 | MS.gene67234:intron | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | + | chr5.3:58721105-58721124 | None:intergenic | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | - | chr5.3:58721102-58721121 | MS.gene67234:intron | 55.0% |
| ! | GGGGAATACCTCGCCTTGTT+TGG | - | chr5.3:58722480-58722499 | MS.gene67234:intron | 55.0% |
| !! | AAGAGGGGAGGAGAGTGCTT+AGG | + | chr5.3:58723989-58724008 | None:intergenic | 55.0% |
| !! | AGAGGGGAGGAGAGTGCTTA+GGG | + | chr5.3:58723988-58724007 | None:intergenic | 55.0% |
| !! | AGCTTTAGGGAGAGACGAGG+GGG | - | chr5.3:58722461-58722480 | MS.gene67234:intron | 55.0% |
| !! | GAGAGCTTTAGGGAGAGACG+AGG | - | chr5.3:58722458-58722477 | MS.gene67234:intron | 55.0% |
| !! | GAGCTTTAGGGAGAGACGAG+GGG | - | chr5.3:58722460-58722479 | MS.gene67234:intron | 55.0% |
| AGCAGGCCTCATTCCGTCCA+GGG | - | chr5.3:58724709-58724728 | MS.gene67234:intron | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | - | chr5.3:58721090-58721109 | MS.gene67234:intron | 60.0% | |
| GACGCCTAAGCTTCGAGGAC+AGG | - | chr5.3:58721488-58721507 | MS.gene67234:intron | 60.0% | |
| GAGGTGAGCAGTCGAGAAGG+AGG | - | chr5.3:58722514-58722533 | MS.gene67234:intron | 60.0% | |
| GTTGGGAGCAGCTGCCTCTT+GGG | + | chr5.3:58724742-58724761 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | - | chr5.3:58721091-58721110 | MS.gene67234:intron | 60.0% | |
| TGTTGGGAGCAGCTGCCTCT+TGG | + | chr5.3:58724743-58724762 | None:intergenic | 60.0% | |
| ! | CGACCCCACTTGGTGGGATA+AGG | - | chr5.3:58721097-58721116 | MS.gene67234:intron | 60.0% |
| ACCGGACCCTGGACGGAATG+AGG | + | chr5.3:58724718-58724737 | None:intergenic | 65.0% | |
| AGCAGCTGCCTCTTGGGCAC+CGG | + | chr5.3:58724736-58724755 | None:intergenic | 65.0% | |
| CAGCAGGCCTCATTCCGTCC+AGG | - | chr5.3:58724708-58724727 | MS.gene67234:intron | 65.0% | |
| GCCTCATTCCGTCCAGGGTC+CGG | - | chr5.3:58724714-58724733 | MS.gene67234:intron | 65.0% | |
| GTGTGGGAGGGAACATGGGG+TGG | + | chr5.3:58723492-58723511 | None:intergenic | 65.0% | |
| TCCAGGGTCCGGTGCCCAAG+AGG | - | chr5.3:58724725-58724744 | MS.gene67234:intron | 70.0% | |
| !! | CTTGGGCACCGGACCCTGGA+CGG | + | chr5.3:58724725-58724744 | None:intergenic | 70.0% |
| !! | GCCTCTTGGGCACCGGACCC+TGG | + | chr5.3:58724729-58724748 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 58719394 | 58724989 | 58719394 | ID=MS.gene67234 |
| chr5.3 | mRNA | 58719394 | 58724989 | 58719394 | ID=MS.gene67234.t1;Parent=MS.gene67234 |
| chr5.3 | exon | 58724917 | 58724989 | 58724917 | ID=MS.gene67234.t1.exon1;Parent=MS.gene67234.t1 |
| chr5.3 | CDS | 58724917 | 58724989 | 58724917 | ID=cds.MS.gene67234.t1;Parent=MS.gene67234.t1 |
| chr5.3 | exon | 58722790 | 58722962 | 58722790 | ID=MS.gene67234.t1.exon2;Parent=MS.gene67234.t1 |
| chr5.3 | CDS | 58722790 | 58722962 | 58722790 | ID=cds.MS.gene67234.t1;Parent=MS.gene67234.t1 |
| chr5.3 | exon | 58722196 | 58722289 | 58722196 | ID=MS.gene67234.t1.exon3;Parent=MS.gene67234.t1 |
| chr5.3 | CDS | 58722196 | 58722289 | 58722196 | ID=cds.MS.gene67234.t1;Parent=MS.gene67234.t1 |
| chr5.3 | exon | 58720151 | 58720236 | 58720151 | ID=MS.gene67234.t1.exon4;Parent=MS.gene67234.t1 |
| chr5.3 | CDS | 58720151 | 58720236 | 58720151 | ID=cds.MS.gene67234.t1;Parent=MS.gene67234.t1 |
| chr5.3 | exon | 58719394 | 58719669 | 58719394 | ID=MS.gene67234.t1.exon5;Parent=MS.gene67234.t1 |
| chr5.3 | CDS | 58719394 | 58719669 | 58719394 | ID=cds.MS.gene67234.t1;Parent=MS.gene67234.t1 |
| Gene Sequence |
| Protein sequence |
