Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000626.t1 | AES95696.1 | 86.4 | 543 | 55 | 3 | 1 | 539 | 62 | 589 | 1.20E-261 | 912.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000626.t1 | Q9M084 | 64.3 | 498 | 168 | 2 | 52 | 539 | 61 | 558 | 8.5e-184 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000626.t1 | G7KAW8 | 86.4 | 543 | 55 | 3 | 1 | 539 | 62 | 589 | 8.5e-262 | 912.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000626.t1 | MTR_5g028360 | 88.214 | 543 | 45 | 3 | 1 | 539 | 62 | 589 | 0.0 | 969 |
| MS.gene000626.t1 | MTR_1g014140 | 73.752 | 541 | 140 | 1 | 1 | 539 | 1 | 541 | 0.0 | 814 |
| MS.gene000626.t1 | MTR_4g100920 | 25.145 | 517 | 295 | 19 | 65 | 534 | 70 | 541 | 9.64e-33 | 132 |
| MS.gene000626.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 1.18e-26 | 114 |
| MS.gene000626.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 1.13e-25 | 111 |
| MS.gene000626.t1 | MTR_2g036600 | 22.245 | 481 | 321 | 16 | 91 | 531 | 121 | 588 | 2.68e-14 | 76.3 |
| MS.gene000626.t1 | MTR_4g127790 | 22.905 | 358 | 238 | 11 | 207 | 530 | 32 | 385 | 2.11e-11 | 66.2 |
| MS.gene000626.t1 | MTR_4g052070 | 26.295 | 251 | 162 | 8 | 88 | 331 | 70 | 304 | 2.49e-11 | 66.6 |
| MS.gene000626.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 7.78e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000626.t1 | AT4G31180 | 63.250 | 517 | 180 | 2 | 33 | 539 | 42 | 558 | 0.0 | 677 |
| MS.gene000626.t1 | AT4G31180 | 63.250 | 517 | 180 | 2 | 33 | 539 | 42 | 558 | 0.0 | 677 |
| MS.gene000626.t1 | AT4G26870 | 61.822 | 516 | 191 | 4 | 25 | 539 | 22 | 532 | 0.0 | 645 |
| MS.gene000626.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 126 | 582 | 1.55e-30 | 126 |
| MS.gene000626.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 106 | 562 | 1.57e-30 | 125 |
| MS.gene000626.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 1.34e-27 | 117 |
| MS.gene000626.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 2.27e-25 | 110 |
| MS.gene000626.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 2.41e-11 | 67.0 |
Find 120 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.1:-19148401 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.1:+19150042 | MS.gene000626:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.1:+19148010 | MS.gene000626:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.1:-19147397 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.190994 | 5.1:-19149987 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.1:+19146870 | MS.gene000626:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.1:+19147182 | MS.gene000626:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.1:+19150303 | MS.gene000626:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.1:-19146883 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.1:+19148196 | MS.gene000626:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.1:+19149945 | MS.gene000626:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.1:-19146943 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.1:-19146900 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.1:-19147194 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.1:-19146944 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.1:-19147726 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.1:-19146919 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.1:+19150229 | MS.gene000626:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.1:+19147166 | MS.gene000626:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.1:-19147098 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.1:+19149678 | MS.gene000626:CDS |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.1:+19150218 | MS.gene000626:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.1:-19148016 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.394922 | 5.1:+19147665 | MS.gene000626:CDS |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.1:-19147384 | None:intergenic |
| TGGTGCAGGCTCTTTGCACT+CGG | 0.398760 | 5.1:-19146727 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.1:+19148072 | MS.gene000626:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.1:+19150224 | MS.gene000626:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.1:+19147149 | MS.gene000626:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.1:-19150036 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.1:+19149670 | MS.gene000626:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.1:+19146887 | MS.gene000626:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.1:-19146899 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.1:-19149693 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.1:-19146741 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.1:+19149253 | MS.gene000626:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.1:+19147427 | MS.gene000626:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.1:-19147383 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.1:-19146914 | None:intergenic |
| TGGCCATTTGTTGCCGATGT+CGG | 0.475441 | 5.1:-19146812 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.1:-19147990 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.1:+19147196 | MS.gene000626:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.1:+19147354 | MS.gene000626:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.1:-19146942 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.501457 | 5.1:+19146809 | MS.gene000626:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.1:-19146873 | None:intergenic |
| GTACCTTTAGCGGTTCGAAT+GGG | 0.507990 | 5.1:-19148443 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.1:+19146981 | MS.gene000626:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.1:-19146796 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.1:+19148102 | MS.gene000626:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.1:+19147417 | MS.gene000626:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.1:-19146950 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.1:-19150221 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.1:+19148237 | MS.gene000626:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.1:-19146949 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.1:-19147746 | None:intergenic |
| AGTACCTTTAGCGGTTCGAA+TGG | 0.527085 | 5.1:-19148444 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.1:+19146925 | MS.gene000626:CDS |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.1:-19146793 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.1:+19147717 | MS.gene000626:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.1:-19147023 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.1:-19149679 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.1:-19149268 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.1:-19146874 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.1:-19148090 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.1:-19148246 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.1:+19148176 | MS.gene000626:CDS |
| GGTGCAGGCTCTTTGCACTC+GGG | 0.544258 | 5.1:-19146726 | None:intergenic |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.1:-19148185 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.1:-19148103 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.1:-19147393 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.1:+19147355 | MS.gene000626:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.1:+19148700 | MS.gene000626:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.1:+19146956 | MS.gene000626:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.1:+19147136 | MS.gene000626:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.1:-19149673 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.1:-19148082 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.1:-19147180 | None:intergenic |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.1:+19146799 | MS.gene000626:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.573542 | 5.1:+19148440 | MS.gene000626:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.1:+19149286 | MS.gene000626:CDS |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.1:+19148112 | MS.gene000626:CDS |
| GACAGAGGTAGTAGCAGCGG+TGG | 0.582801 | 5.1:-19146832 | None:intergenic |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.1:-19146753 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.1:-19147185 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.1:+19148021 | MS.gene000626:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.1:-19146941 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.1:-19146747 | None:intergenic |
| GTCGGTGTAATGTACCTGAC+TGG | 0.595013 | 5.1:-19147441 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.1:-19149685 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.1:-19149701 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.1:+19147064 | MS.gene000626:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.1:+19149746 | MS.gene000626:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.1:+19149278 | MS.gene000626:CDS |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.1:+19147019 | MS.gene000626:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.1:-19146880 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.1:-19146847 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.1:+19146982 | MS.gene000626:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.1:+19148025 | MS.gene000626:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.1:+19146743 | MS.gene000626:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.1:-19149686 | None:intergenic |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.616326 | 5.1:-19146835 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.1:+19148022 | MS.gene000626:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.1:+19150209 | MS.gene000626:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.1:-19148687 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.1:-19147392 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.1:-19146872 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.1:+19147139 | MS.gene000626:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.1:+19148215 | MS.gene000626:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.1:-19147145 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.1:+19148717 | MS.gene000626:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.1:+19148159 | MS.gene000626:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.1:+19150254 | MS.gene000626:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.1:+19147100 | MS.gene000626:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.1:+19148412 | MS.gene000626:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.1:+19146908 | MS.gene000626:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.1:+19147418 | MS.gene000626:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.1:-19150277 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.1:+19150212 | MS.gene000626:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.1:+19148683 | MS.gene000626:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5.1:19149521-19149540 | None:intergenic | 10.0% |
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.1:19149336-19149355 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5.1:19149522-19149541 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.1:19149337-19149356 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTTGTATTAT+AGG | + | chr5.1:19148465-19148484 | MS.gene000626:intron | 10.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | - | chr5.1:19149497-19149516 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5.1:19149520-19149539 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr5.1:19149456-19149475 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr5.1:19149457-19149476 | None:intergenic | 15.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.1:19147216-19147235 | MS.gene000626:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.1:19147941-19147960 | MS.gene000626:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.1:19148933-19148952 | MS.gene000626:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.1:19148325-19148344 | MS.gene000626:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.1:19149312-19149331 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.1:19150146-19150165 | MS.gene000626:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.1:19148056-19148075 | MS.gene000626:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.1:19150144-19150163 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.1:19150143-19150162 | None:intergenic | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | - | chr5.1:19149498-19149517 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.1:19148895-19148914 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.1:19149630-19149649 | MS.gene000626:intron | 20.0% |
| !!! | AAAAAAAAAAGTACCTTTAG+CGG | - | chr5.1:19148456-19148475 | None:intergenic | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.1:19147628-19147647 | MS.gene000626:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.1:19147215-19147234 | MS.gene000626:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.1:19149610-19149629 | MS.gene000626:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr5.1:19149387-19149406 | None:intergenic | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.1:19147849-19147868 | MS.gene000626:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.1:19147253-19147272 | MS.gene000626:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.1:19148055-19148074 | MS.gene000626:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.1:19147942-19147961 | MS.gene000626:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.1:19149168-19149187 | MS.gene000626:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.1:19148335-19148354 | MS.gene000626:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.1:19147620-19147639 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.1:19149084-19149103 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.1:19146981-19147000 | MS.gene000626:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.1:19150039-19150058 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.1:19146982-19147001 | MS.gene000626:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.1:19147802-19147821 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.1:19148755-19148774 | MS.gene000626:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.1:19147355-19147374 | MS.gene000626:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.1:19149903-19149922 | None:intergenic | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.1:19149225-19149244 | MS.gene000626:intron | 25.0% |
| !! | TTGAAATGACTCAGTTATTT+TGG | - | chr5.1:19149410-19149429 | None:intergenic | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.1:19147547-19147566 | MS.gene000626:intron | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.1:19149091-19149110 | MS.gene000626:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr5.1:19149388-19149407 | None:intergenic | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.1:19147503-19147522 | None:intergenic | 25.0% |
| !!! | TGAAATGACTCAGTTATTTT+GGG | - | chr5.1:19149409-19149428 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.1:19147522-19147541 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.1:19149885-19149904 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.1:19148316-19148335 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.1:19148404-19148423 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.1:19148818-19148837 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.1:19147354-19147373 | MS.gene000626:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.1:19148019-19148038 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.1:19150042-19150061 | MS.gene000626:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.1:19147993-19148012 | None:intergenic | 30.0% | |
| TCATAGTTGATCTTATGTAG+TGG | + | chr5.1:19148506-19148525 | MS.gene000626:intron | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.1:19149172-19149191 | MS.gene000626:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.1:19149102-19149121 | MS.gene000626:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.1:19147316-19147335 | MS.gene000626:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.1:19148022-19148041 | MS.gene000626:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.1:19149867-19149886 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.1:19149927-19149946 | MS.gene000626:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.1:19148135-19148154 | MS.gene000626:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.1:19147635-19147654 | MS.gene000626:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.1:19149016-19149035 | MS.gene000626:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.1:19147418-19147437 | MS.gene000626:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.1:19150194-19150213 | MS.gene000626:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.1:19148249-19148268 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.1:19147210-19147229 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.1:19149278-19149297 | MS.gene000626:CDS | 35.0% | |
| AGAAAATGGGTCAGATATTC+CGG | - | chr5.1:19149374-19149393 | None:intergenic | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.1:19150114-19150133 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.1:19147276-19147295 | MS.gene000626:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.1:19150280-19150299 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.1:19147387-19147406 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.1:19147749-19147768 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.1:19148991-19149010 | MS.gene000626:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.1:19146886-19146905 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.1:19147300-19147319 | MS.gene000626:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.1:19149271-19149290 | None:intergenic | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.1:19147386-19147405 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.1:19149945-19149964 | MS.gene000626:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.1:19149854-19149873 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.1:19148010-19148029 | MS.gene000626:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.1:19147055-19147074 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.1:19149766-19149785 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.1:19149990-19150009 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.1:19147319-19147338 | MS.gene000626:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.1:19148021-19148040 | MS.gene000626:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.1:19147734-19147753 | MS.gene000626:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.1:19147285-19147304 | MS.gene000626:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.1:19150100-19150119 | MS.gene000626:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.1:19148284-19148303 | MS.gene000626:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.1:19148283-19148302 | MS.gene000626:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.1:19148998-19149017 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.1:19147400-19147419 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.1:19147946-19147965 | MS.gene000626:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.1:19149719-19149738 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.1:19148139-19148158 | MS.gene000626:CDS | 35.0% |
| AATCTGTGTGAAATGAGCCA+AGG | + | chr5.1:19149541-19149560 | MS.gene000626:intron | 40.0% | |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.1:19148102-19148121 | MS.gene000626:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.1:19149286-19149305 | MS.gene000626:CDS | 40.0% | |
| AGCCAAGGGGTCAAATAAAT+TGG | + | chr5.1:19149556-19149575 | MS.gene000626:intron | 40.0% | |
| AGGGGTCAAATAAATTGGGA+CGG | + | chr5.1:19149561-19149580 | MS.gene000626:intron | 40.0% | |
| ATCTGTGTGAAATGAGCCAA+GGG | + | chr5.1:19149542-19149561 | MS.gene000626:intron | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.1:19147182-19147201 | MS.gene000626:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.1:19149004-19149023 | MS.gene000626:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.1:19148112-19148131 | MS.gene000626:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.1:19149696-19149715 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.1:19147460-19147479 | MS.gene000626:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.1:19147729-19147748 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.1:19147462-19147481 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | - | chr5.1:19149373-19149392 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.1:19147417-19147436 | MS.gene000626:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.1:19147275-19147294 | MS.gene000626:intron | 40.0% | |
| GCCAAGGGGTCAAATAAATT+GGG | + | chr5.1:19149557-19149576 | MS.gene000626:intron | 40.0% | |
| GTCAAATAAATTGGGACGGA+GGG | + | chr5.1:19149565-19149584 | MS.gene000626:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.1:19150303-19150322 | MS.gene000626:CDS | 40.0% | |
| TCCCAATTTATTTGACCCCT+TGG | - | chr5.1:19149561-19149580 | None:intergenic | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.1:19147064-19147083 | MS.gene000626:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.1:19149081-19149100 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.1:19146887-19146906 | MS.gene000626:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.1:19147717-19147736 | MS.gene000626:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.1:19147183-19147202 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.1:19147665-19147684 | MS.gene000626:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.1:19148025-19148044 | MS.gene000626:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.1:19147385-19147404 | MS.gene000626:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.1:19147395-19147414 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.1:19149232-19149251 | MS.gene000626:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.1:19149253-19149272 | MS.gene000626:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.1:19148285-19148304 | MS.gene000626:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.1:19146876-19146895 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.1:19147396-19147415 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.1:19148717-19148736 | MS.gene000626:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.1:19148412-19148431 | MS.gene000626:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.1:19148864-19148883 | MS.gene000626:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.1:19149704-19149723 | None:intergenic | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.1:19149932-19149951 | MS.gene000626:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.1:19148140-19148159 | MS.gene000626:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.1:19147639-19147658 | MS.gene000626:intron | 40.0% |
| AAATATTACTCCCTCCGTCC+CGG | + | chr5.1:19149352-19149371 | MS.gene000626:intron | 45.0% | |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.1:19147026-19147045 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+GGG | - | chr5.1:19150088-19150107 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.1:19146782-19146801 | MS.gene000626:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.1:19146953-19146972 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.1:19148188-19148207 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.1:19148961-19148980 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.1:19147019-19147038 | MS.gene000626:CDS | 45.0% | |
| ACTGCAGATTCACAGGGTTA+TGG | - | chr5.1:19148666-19148685 | None:intergenic | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.1:19148196-19148215 | MS.gene000626:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.1:19148683-19148702 | MS.gene000626:intron | 45.0% | |
| AGTACCTTTAGCGGTTCGAA+TGG | - | chr5.1:19148447-19148466 | None:intergenic | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.1:19148832-19148851 | MS.gene000626:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.1:19146952-19146971 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.1:19147101-19147120 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.1:19150123-19150142 | MS.gene000626:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.1:19148176-19148195 | MS.gene000626:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.1:19149011-19149030 | MS.gene000626:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.1:19150254-19150273 | MS.gene000626:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.1:19149022-19149041 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.1:19148237-19148256 | MS.gene000626:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.1:19148106-19148125 | None:intergenic | 45.0% | |
| GGTCAAATAAATTGGGACGG+AGG | + | chr5.1:19149564-19149583 | MS.gene000626:intron | 45.0% | |
| GTACCTTTAGCGGTTCGAAT+GGG | - | chr5.1:19148446-19148465 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.1:19147188-19147207 | None:intergenic | 45.0% | |
| TAAGCGACACTCAATGCTAC+AGG | - | chr5.1:19150089-19150108 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.1:19149670-19149689 | MS.gene000626:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.1:19148254-19148273 | MS.gene000626:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.1:19149746-19149765 | MS.gene000626:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.1:19146756-19146775 | None:intergenic | 45.0% | |
| TCTGTGTGAAATGAGCCAAG+GGG | + | chr5.1:19149543-19149562 | MS.gene000626:intron | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.1:19147100-19147119 | MS.gene000626:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.1:19146850-19146869 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.1:19147197-19147216 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.1:19146883-19146902 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.1:19146956-19146975 | MS.gene000626:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.1:19146877-19146896 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.1:19147166-19147185 | MS.gene000626:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.1:19146875-19146894 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.1:19146902-19146921 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.1:19146903-19146922 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.1:19148215-19148234 | MS.gene000626:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.1:19147196-19147215 | MS.gene000626:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.1:19148946-19148965 | MS.gene000626:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.1:19150311-19150330 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.1:19148141-19148160 | MS.gene000626:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.1:19149044-19149063 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.1:19149678-19149697 | MS.gene000626:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.1:19148835-19148854 | MS.gene000626:intron | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.1:19146838-19146857 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.1:19150209-19150228 | MS.gene000626:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.1:19146799-19146818 | MS.gene000626:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.1:19150210-19150229 | None:intergenic | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr5.1:19149369-19149388 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.1:19146799-19146818 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.1:19148962-19148981 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.1:19148836-19148855 | MS.gene000626:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.1:19148700-19148719 | MS.gene000626:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.1:19146870-19146889 | MS.gene000626:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.1:19148440-19148459 | MS.gene000626:CDS | 50.0% | |
| GTCGGTGTAATGTACCTGAC+TGG | - | chr5.1:19147444-19147463 | None:intergenic | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.1:19148845-19148864 | MS.gene000626:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.1:19147427-19147446 | MS.gene000626:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.1:19149688-19149707 | None:intergenic | 50.0% |
| ! | GCAGGTACTGCAGATTCACA+GGG | - | chr5.1:19148672-19148691 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.1:19149682-19149701 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.1:19148690-19148709 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.1:19149689-19149708 | None:intergenic | 50.0% |
| ! | TGGCCATTTGTTGCCGATGT+CGG | - | chr5.1:19146815-19146834 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.1:19146946-19146965 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.1:19146947-19146966 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.1:19149045-19149064 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.1:19148147-19148166 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.1:19148839-19148858 | MS.gene000626:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.1:19147148-19147167 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.1:19148093-19148112 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.1:19149069-19149088 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.1:19146917-19146936 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.1:19149038-19149057 | MS.gene000626:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.1:19146809-19146828 | MS.gene000626:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.1:19146908-19146927 | MS.gene000626:CDS | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr5.1:19149365-19149384 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.1:19150212-19150231 | MS.gene000626:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.1:19146796-19146815 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.1:19146743-19146762 | MS.gene000626:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.1:19148953-19148972 | MS.gene000626:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+CGG | - | chr5.1:19146730-19146749 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+AGG | - | chr5.1:19148673-19148692 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.1:19146750-19146769 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.1:19147149-19147168 | MS.gene000626:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.1:19148853-19148872 | MS.gene000626:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.1:19149676-19149695 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.1:19147136-19147155 | MS.gene000626:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.1:19146945-19146964 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.1:19148159-19148178 | MS.gene000626:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+TGG | - | chr5.1:19146835-19146854 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.1:19150218-19150237 | MS.gene000626:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.1:19149037-19149056 | MS.gene000626:intron | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | - | chr5.1:19149366-19149385 | None:intergenic | 60.0% | |
| GGTGCAGGCTCTTTGCACTC+GGG | - | chr5.1:19146729-19146748 | None:intergenic | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.1:19149057-19149076 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.1:19147139-19147158 | MS.gene000626:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.1:19148072-19148091 | MS.gene000626:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.1:19146744-19146763 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.1:19146922-19146941 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.1:19150224-19150243 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.1:19148085-19148104 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.1:19146944-19146963 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.1:19146940-19146959 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.1:19150224-19150243 | MS.gene000626:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.1:19150229-19150248 | MS.gene000626:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.1:19146939-19146958 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.1:19146925-19146944 | MS.gene000626:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.1:19146930-19146949 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.1:19146932-19146951 | MS.gene000626:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.1:19146935-19146954 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 19146717 | 19150337 | 19146717 | ID=MS.gene000626 |
| chr5.1 | mRNA | 19146717 | 19150337 | 19146717 | ID=MS.gene000626.t1;Parent=MS.gene000626 |
| chr5.1 | exon | 19146717 | 19147217 | 19146717 | ID=MS.gene000626.t1.exon1;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19146717 | 19147217 | 19146717 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19147338 | 19147448 | 19147338 | ID=MS.gene000626.t1.exon2;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19147338 | 19147448 | 19147338 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19147657 | 19147770 | 19147657 | ID=MS.gene000626.t1.exon3;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19147657 | 19147770 | 19147657 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19147968 | 19148258 | 19147968 | ID=MS.gene000626.t1.exon4;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19147968 | 19148258 | 19147968 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19148351 | 19148461 | 19148351 | ID=MS.gene000626.t1.exon5;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19148351 | 19148461 | 19148351 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19148685 | 19148738 | 19148685 | ID=MS.gene000626.t1.exon6;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19148685 | 19148738 | 19148685 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19149247 | 19149326 | 19149247 | ID=MS.gene000626.t1.exon7;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19149247 | 19149326 | 19149247 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19149652 | 19149767 | 19149652 | ID=MS.gene000626.t1.exon8;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19149652 | 19149767 | 19149652 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19149949 | 19150063 | 19149949 | ID=MS.gene000626.t1.exon9;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19149949 | 19150063 | 19149949 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| chr5.1 | exon | 19150211 | 19150337 | 19150211 | ID=MS.gene000626.t1.exon10;Parent=MS.gene000626.t1 |
| chr5.1 | CDS | 19150211 | 19150337 | 19150211 | ID=cds.MS.gene000626.t1;Parent=MS.gene000626.t1 |
| Gene Sequence |
| Protein sequence |
