Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98464.t1 | AES95696.1 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.50E-256 | 895.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98464.t1 | Q9M084 | 64.3 | 498 | 168 | 2 | 52 | 539 | 61 | 558 | 8.5e-184 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98464.t1 | G7KAW8 | 84.7 | 543 | 64 | 3 | 1 | 539 | 62 | 589 | 1.1e-256 | 895.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98464.t1 | MTR_5g028360 | 88.398 | 543 | 44 | 3 | 1 | 539 | 62 | 589 | 0.0 | 972 |
| MS.gene98464.t1 | MTR_1g014140 | 74.122 | 541 | 138 | 1 | 1 | 539 | 1 | 541 | 0.0 | 818 |
| MS.gene98464.t1 | MTR_4g100920 | 25.145 | 517 | 295 | 19 | 65 | 534 | 70 | 541 | 8.52e-33 | 132 |
| MS.gene98464.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 7.40e-27 | 114 |
| MS.gene98464.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 6.61e-26 | 112 |
| MS.gene98464.t1 | MTR_2g036600 | 22.245 | 481 | 321 | 16 | 91 | 531 | 121 | 588 | 2.00e-14 | 76.6 |
| MS.gene98464.t1 | MTR_4g127790 | 23.464 | 358 | 236 | 12 | 207 | 530 | 32 | 385 | 6.24e-12 | 67.8 |
| MS.gene98464.t1 | MTR_4g052070 | 26.295 | 251 | 162 | 8 | 88 | 331 | 70 | 304 | 2.35e-11 | 67.0 |
| MS.gene98464.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 5.65e-11 | 65.5 |
| MS.gene98464.t1 | MTR_8g104740 | 27.857 | 280 | 173 | 12 | 61 | 331 | 57 | 316 | 7.38e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98464.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene98464.t1 | AT4G31180 | 63.056 | 517 | 181 | 2 | 33 | 539 | 42 | 558 | 0.0 | 675 |
| MS.gene98464.t1 | AT4G26870 | 61.822 | 516 | 191 | 4 | 25 | 539 | 22 | 532 | 0.0 | 646 |
| MS.gene98464.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 106 | 562 | 1.50e-30 | 125 |
| MS.gene98464.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 126 | 582 | 1.61e-30 | 126 |
| MS.gene98464.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 8.06e-28 | 117 |
| MS.gene98464.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 1.38e-25 | 111 |
| MS.gene98464.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 2.23e-11 | 67.0 |
Find 121 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.4:-18937478 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.4:+18938878 | MS.gene98464:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.4:+18937087 | MS.gene98464:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.4:-18936474 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.230009 | 5.4:-18938823 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.4:+18935947 | MS.gene98464:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.4:+18936259 | MS.gene98464:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.4:+18939139 | MS.gene98464:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.4:-18935960 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.4:+18937273 | MS.gene98464:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.4:+18938781 | MS.gene98464:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.4:-18936020 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.4:-18935977 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.4:-18936271 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.4:-18936021 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.4:-18936803 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.4:-18935996 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.4:+18939065 | MS.gene98464:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.4:+18936243 | MS.gene98464:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.4:-18936175 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.4:+18938514 | MS.gene98464:CDS |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.4:+18939054 | MS.gene98464:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.4:-18937093 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.394922 | 5.4:+18936742 | MS.gene98464:CDS |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.4:-18936461 | None:intergenic |
| TGGTGCAGGCTCTTTGCACT+CGG | 0.398760 | 5.4:-18935804 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.4:+18937149 | MS.gene98464:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.4:+18939060 | MS.gene98464:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.4:+18936226 | MS.gene98464:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.4:-18938872 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.4:+18938506 | MS.gene98464:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.4:+18935964 | MS.gene98464:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.4:-18935976 | None:intergenic |
| CGGCCATTTGTTGCCGATGT+CGG | 0.439008 | 5.4:-18935889 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.4:-18938529 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.4:-18935818 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.4:+18938321 | MS.gene98464:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.4:+18936504 | MS.gene98464:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.4:-18936460 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.4:-18935991 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.4:-18937067 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.4:+18936273 | MS.gene98464:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.4:+18936431 | MS.gene98464:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.4:-18936019 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.503015 | 5.4:+18935886 | MS.gene98464:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.4:-18935950 | None:intergenic |
| GTACCTTTAGCGGTTCGAAT+GGG | 0.507990 | 5.4:-18937520 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.4:+18936058 | MS.gene98464:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.4:-18935873 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.4:+18937179 | MS.gene98464:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.4:+18936494 | MS.gene98464:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.4:-18936027 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.4:-18939057 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.4:+18937314 | MS.gene98464:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.4:-18936026 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.4:-18936823 | None:intergenic |
| AGTACCTTTAGCGGTTCGAA+TGG | 0.527085 | 5.4:-18937521 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.4:+18936002 | MS.gene98464:CDS |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.4:-18935870 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.4:+18936794 | MS.gene98464:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.4:-18936100 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.4:-18938515 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.4:-18938336 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.4:-18935951 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.4:-18937167 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.4:-18937323 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.4:+18937253 | MS.gene98464:CDS |
| GGTGCAGGCTCTTTGCACTC+GGG | 0.544258 | 5.4:-18935803 | None:intergenic |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.4:-18937262 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.4:-18937180 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.4:-18936470 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.4:+18936432 | MS.gene98464:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.4:+18937768 | MS.gene98464:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.4:+18936033 | MS.gene98464:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.4:+18936213 | MS.gene98464:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.4:-18938509 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.4:-18937159 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.4:-18936257 | None:intergenic |
| ATTGTTAGAAGAACGTGCAC+AGG | 0.565590 | 5.4:+18938828 | MS.gene98464:CDS |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.4:+18935876 | MS.gene98464:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.573542 | 5.4:+18937517 | MS.gene98464:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.4:+18938354 | MS.gene98464:CDS |
| GTCGGTGCAATGTACCTGAC+TGG | 0.577872 | 5.4:-18936518 | None:intergenic |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.4:+18937189 | MS.gene98464:CDS |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.4:-18935830 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.4:-18936262 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.4:+18937098 | MS.gene98464:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.4:-18936018 | None:intergenic |
| GACAGAGGTAGTAGCAGCGG+CGG | 0.587288 | 5.4:-18935909 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.4:-18935824 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.4:-18938521 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.4:-18938537 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.4:+18936141 | MS.gene98464:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.4:+18938582 | MS.gene98464:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.4:+18938346 | MS.gene98464:CDS |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.604458 | 5.4:-18935912 | None:intergenic |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.4:+18936096 | MS.gene98464:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.4:-18935957 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.4:-18935924 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.4:+18936059 | MS.gene98464:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.4:+18937102 | MS.gene98464:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.4:+18935820 | MS.gene98464:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.4:-18938522 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.4:+18937099 | MS.gene98464:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.4:+18939045 | MS.gene98464:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.4:-18937755 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.4:-18936469 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.4:-18935949 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.4:+18936216 | MS.gene98464:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.4:+18937292 | MS.gene98464:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.4:-18936222 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.4:+18937785 | MS.gene98464:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.4:+18937236 | MS.gene98464:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.4:+18939090 | MS.gene98464:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.4:+18936177 | MS.gene98464:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.4:+18937489 | MS.gene98464:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.4:+18935985 | MS.gene98464:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.4:+18936495 | MS.gene98464:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.4:-18939113 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.4:+18939048 | MS.gene98464:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.4:+18937751 | MS.gene98464:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.4:18938404-18938423 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.4:18938405-18938424 | None:intergenic | 10.0% |
| !!! | ACTTTTTTTTTTTGTATTAT+AGG | + | chr5.4:18937541-18937560 | MS.gene98464:intron | 10.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.4:18936293-18936312 | MS.gene98464:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.4:18937018-18937037 | MS.gene98464:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.4:18938001-18938020 | MS.gene98464:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.4:18937402-18937421 | MS.gene98464:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.4:18938380-18938399 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.4:18938982-18939001 | MS.gene98464:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.4:18937133-18937152 | MS.gene98464:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.4:18938980-18938999 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.4:18938979-18938998 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.4:18937963-18937982 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.4:18938466-18938485 | MS.gene98464:intron | 20.0% |
| !!! | AAAAAAAAAAGTACCTTTAG+CGG | - | chr5.4:18937533-18937552 | None:intergenic | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.4:18936705-18936724 | MS.gene98464:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.4:18936292-18936311 | MS.gene98464:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.4:18938446-18938465 | MS.gene98464:intron | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.4:18936926-18936945 | MS.gene98464:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.4:18936330-18936349 | MS.gene98464:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.4:18937132-18937151 | MS.gene98464:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.4:18937019-18937038 | MS.gene98464:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.4:18938236-18938255 | MS.gene98464:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.4:18937412-18937431 | MS.gene98464:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.4:18936697-18936716 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.4:18938152-18938171 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.4:18936058-18936077 | MS.gene98464:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.4:18938875-18938894 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.4:18936059-18936078 | MS.gene98464:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.4:18936879-18936898 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.4:18937823-18937842 | MS.gene98464:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.4:18936432-18936451 | MS.gene98464:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.4:18938739-18938758 | None:intergenic | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.4:18938293-18938312 | MS.gene98464:intron | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.4:18936624-18936643 | MS.gene98464:intron | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.4:18938159-18938178 | MS.gene98464:intron | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.4:18936580-18936599 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.4:18936599-18936618 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.4:18938721-18938740 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.4:18937393-18937412 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.4:18937481-18937500 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.4:18937886-18937905 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.4:18936431-18936450 | MS.gene98464:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.4:18937096-18937115 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.4:18938878-18938897 | MS.gene98464:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.4:18937070-18937089 | None:intergenic | 30.0% | |
| TCATAGTTGATCTTATGTAG+TGG | + | chr5.4:18937582-18937601 | MS.gene98464:intron | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.4:18938240-18938259 | MS.gene98464:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.4:18938170-18938189 | MS.gene98464:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.4:18936393-18936412 | MS.gene98464:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.4:18937099-18937118 | MS.gene98464:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.4:18938703-18938722 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.4:18938763-18938782 | MS.gene98464:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.4:18937212-18937231 | MS.gene98464:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.4:18936712-18936731 | MS.gene98464:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.4:18938084-18938103 | MS.gene98464:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.4:18936495-18936514 | MS.gene98464:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.4:18939030-18939049 | MS.gene98464:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.4:18937326-18937345 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.4:18936287-18936306 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.4:18938346-18938365 | MS.gene98464:CDS | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.4:18938950-18938969 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.4:18936353-18936372 | MS.gene98464:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.4:18939116-18939135 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.4:18936464-18936483 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.4:18936826-18936845 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.4:18938059-18938078 | MS.gene98464:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.4:18935963-18935982 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.4:18936377-18936396 | MS.gene98464:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.4:18938339-18938358 | None:intergenic | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.4:18936463-18936482 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.4:18938781-18938800 | MS.gene98464:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.4:18938690-18938709 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.4:18937087-18937106 | MS.gene98464:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.4:18936132-18936151 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.4:18938602-18938621 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.4:18938826-18938845 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.4:18936396-18936415 | MS.gene98464:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.4:18937098-18937117 | MS.gene98464:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.4:18936811-18936830 | MS.gene98464:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.4:18936362-18936381 | MS.gene98464:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.4:18938936-18938955 | MS.gene98464:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.4:18937361-18937380 | MS.gene98464:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.4:18937360-18937379 | MS.gene98464:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.4:18938066-18938085 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.4:18936477-18936496 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.4:18937023-18937042 | MS.gene98464:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.4:18938555-18938574 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.4:18937216-18937235 | MS.gene98464:CDS | 35.0% |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.4:18937179-18937198 | MS.gene98464:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.4:18938354-18938373 | MS.gene98464:CDS | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.4:18936259-18936278 | MS.gene98464:CDS | 40.0% | |
| ATTGTTAGAAGAACGTGCAC+AGG | + | chr5.4:18938828-18938847 | MS.gene98464:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.4:18938072-18938091 | MS.gene98464:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.4:18937189-18937208 | MS.gene98464:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.4:18938532-18938551 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.4:18936537-18936556 | MS.gene98464:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.4:18936806-18936825 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.4:18936539-18936558 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.4:18936494-18936513 | MS.gene98464:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.4:18936352-18936371 | MS.gene98464:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.4:18939139-18939158 | MS.gene98464:CDS | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.4:18936141-18936160 | MS.gene98464:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.4:18938149-18938168 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.4:18935964-18935983 | MS.gene98464:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.4:18936794-18936813 | MS.gene98464:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.4:18936260-18936279 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.4:18936742-18936761 | MS.gene98464:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.4:18937102-18937121 | MS.gene98464:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.4:18936462-18936481 | MS.gene98464:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.4:18936472-18936491 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.4:18938300-18938319 | MS.gene98464:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.4:18938321-18938340 | MS.gene98464:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.4:18937362-18937381 | MS.gene98464:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.4:18935953-18935972 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.4:18936473-18936492 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.4:18937785-18937804 | MS.gene98464:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.4:18937489-18937508 | MS.gene98464:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.4:18937932-18937951 | MS.gene98464:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.4:18938540-18938559 | None:intergenic | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.4:18938768-18938787 | MS.gene98464:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.4:18937217-18937236 | MS.gene98464:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.4:18936716-18936735 | MS.gene98464:intron | 40.0% |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.4:18936103-18936122 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+GGG | - | chr5.4:18938924-18938943 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.4:18935859-18935878 | MS.gene98464:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.4:18936030-18936049 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.4:18937265-18937284 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.4:18938029-18938048 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.4:18936096-18936115 | MS.gene98464:CDS | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.4:18937273-18937292 | MS.gene98464:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.4:18937751-18937770 | MS.gene98464:intron | 45.0% | |
| AGTACCTTTAGCGGTTCGAA+TGG | - | chr5.4:18937524-18937543 | None:intergenic | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.4:18937900-18937919 | MS.gene98464:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.4:18936029-18936048 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.4:18936178-18936197 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.4:18938959-18938978 | MS.gene98464:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.4:18937253-18937272 | MS.gene98464:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.4:18938079-18938098 | MS.gene98464:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.4:18939090-18939109 | MS.gene98464:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.4:18938090-18938109 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.4:18937314-18937333 | MS.gene98464:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.4:18937183-18937202 | None:intergenic | 45.0% | |
| GTACCTTTAGCGGTTCGAAT+GGG | - | chr5.4:18937523-18937542 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.4:18936265-18936284 | None:intergenic | 45.0% | |
| TAAGCGACACTCAATGCTAC+AGG | - | chr5.4:18938925-18938944 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.4:18938506-18938525 | MS.gene98464:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.4:18937331-18937350 | MS.gene98464:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.4:18938582-18938601 | MS.gene98464:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.4:18935833-18935852 | None:intergenic | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.4:18936177-18936196 | MS.gene98464:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.4:18935927-18935946 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.4:18936274-18936293 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.4:18935960-18935979 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.4:18936033-18936052 | MS.gene98464:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.4:18935954-18935973 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.4:18936243-18936262 | MS.gene98464:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.4:18935952-18935971 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.4:18935979-18935998 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.4:18935980-18935999 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.4:18937292-18937311 | MS.gene98464:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.4:18936273-18936292 | MS.gene98464:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.4:18938014-18938033 | MS.gene98464:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.4:18939147-18939166 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.4:18937218-18937237 | MS.gene98464:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.4:18938112-18938131 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.4:18938514-18938533 | MS.gene98464:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.4:18937903-18937922 | MS.gene98464:intron | 50.0% | |
| ACTGCAGATTCACGGGGTTA+TGG | - | chr5.4:18937734-18937753 | None:intergenic | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.4:18935915-18935934 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.4:18939045-18939064 | MS.gene98464:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.4:18935876-18935895 | MS.gene98464:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.4:18939046-18939065 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.4:18935876-18935895 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.4:18938030-18938049 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.4:18937904-18937923 | MS.gene98464:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.4:18937768-18937787 | MS.gene98464:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.4:18935947-18935966 | MS.gene98464:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.4:18937517-18937536 | MS.gene98464:CDS | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.4:18937913-18937932 | MS.gene98464:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.4:18936504-18936523 | MS.gene98464:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.4:18938524-18938543 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.4:18938518-18938537 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.4:18937758-18937777 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.4:18938525-18938544 | None:intergenic | 50.0% |
| ! | TCGCAGGTACTGCAGATTCA+CGG | - | chr5.4:18937742-18937761 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.4:18936023-18936042 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.4:18936024-18936043 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.4:18938113-18938132 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.4:18937224-18937243 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.4:18937907-18937926 | MS.gene98464:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.4:18936225-18936244 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.4:18937170-18937189 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.4:18938137-18938156 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.4:18935994-18936013 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.4:18938106-18938125 | MS.gene98464:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.4:18935886-18935905 | MS.gene98464:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.4:18935985-18936004 | MS.gene98464:CDS | 55.0% | |
| GTCGGTGCAATGTACCTGAC+TGG | - | chr5.4:18936521-18936540 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.4:18939048-18939067 | MS.gene98464:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.4:18935873-18935892 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.4:18935820-18935839 | MS.gene98464:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.4:18938021-18938040 | MS.gene98464:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+CGG | - | chr5.4:18935807-18935826 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+GGG | - | chr5.4:18937741-18937760 | None:intergenic | 55.0% |
| ! | CGGCCATTTGTTGCCGATGT+CGG | - | chr5.4:18935892-18935911 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.4:18935827-18935846 | None:intergenic | 55.0% |
| ! | GCAGGTACTGCAGATTCACG+GGG | - | chr5.4:18937740-18937759 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.4:18936226-18936245 | MS.gene98464:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.4:18937921-18937940 | MS.gene98464:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.4:18938512-18938531 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.4:18936213-18936232 | MS.gene98464:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.4:18936022-18936041 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.4:18937236-18937255 | MS.gene98464:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+CGG | - | chr5.4:18935912-18935931 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.4:18939054-18939073 | MS.gene98464:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.4:18938105-18938124 | MS.gene98464:intron | 60.0% | |
| GGTGCAGGCTCTTTGCACTC+GGG | - | chr5.4:18935806-18935825 | None:intergenic | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.4:18938125-18938144 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.4:18936216-18936235 | MS.gene98464:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.4:18937149-18937168 | MS.gene98464:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.4:18935821-18935840 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.4:18935999-18936018 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.4:18939060-18939079 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.4:18937162-18937181 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.4:18936021-18936040 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.4:18936017-18936036 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.4:18939060-18939079 | MS.gene98464:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.4:18939065-18939084 | MS.gene98464:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.4:18936016-18936035 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.4:18936002-18936021 | MS.gene98464:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.4:18936007-18936026 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.4:18936009-18936028 | MS.gene98464:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.4:18936012-18936031 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 18935794 | 18939173 | 18935794 | ID=MS.gene98464 |
| chr5.4 | mRNA | 18935794 | 18939173 | 18935794 | ID=MS.gene98464.t1;Parent=MS.gene98464 |
| chr5.4 | exon | 18935794 | 18936294 | 18935794 | ID=MS.gene98464.t1.exon1;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18935794 | 18936294 | 18935794 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18936415 | 18936525 | 18936415 | ID=MS.gene98464.t1.exon2;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18936415 | 18936525 | 18936415 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18936734 | 18936847 | 18936734 | ID=MS.gene98464.t1.exon3;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18936734 | 18936847 | 18936734 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18937045 | 18937335 | 18937045 | ID=MS.gene98464.t1.exon4;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18937045 | 18937335 | 18937045 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18937428 | 18937538 | 18937428 | ID=MS.gene98464.t1.exon5;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18937428 | 18937538 | 18937428 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18937753 | 18937806 | 18937753 | ID=MS.gene98464.t1.exon6;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18937753 | 18937806 | 18937753 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18938315 | 18938394 | 18938315 | ID=MS.gene98464.t1.exon7;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18938315 | 18938394 | 18938315 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18938488 | 18938603 | 18938488 | ID=MS.gene98464.t1.exon8;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18938488 | 18938603 | 18938488 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18938785 | 18938899 | 18938785 | ID=MS.gene98464.t1.exon9;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18938785 | 18938899 | 18938785 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| chr5.4 | exon | 18939047 | 18939173 | 18939047 | ID=MS.gene98464.t1.exon10;Parent=MS.gene98464.t1 |
| chr5.4 | CDS | 18939047 | 18939173 | 18939047 | ID=cds.MS.gene98464.t1;Parent=MS.gene98464.t1 |
| Gene Sequence |
| Protein sequence |
