Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028001.t1 | AES95696.1 | 84.3 | 543 | 66 | 3 | 1 | 539 | 62 | 589 | 2.20E-255 | 891.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028001.t1 | Q9M084 | 64.5 | 498 | 167 | 2 | 52 | 539 | 61 | 558 | 2.2e-184 | 646.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028001.t1 | G7KAW8 | 84.3 | 543 | 66 | 3 | 1 | 539 | 62 | 589 | 1.6e-255 | 891.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028001.t1 | MTR_5g028360 | 88.214 | 543 | 45 | 3 | 1 | 539 | 62 | 589 | 0.0 | 969 |
| MS.gene028001.t1 | MTR_1g014140 | 73.937 | 541 | 139 | 1 | 1 | 539 | 1 | 541 | 0.0 | 816 |
| MS.gene028001.t1 | MTR_4g100920 | 25.145 | 517 | 295 | 19 | 65 | 534 | 70 | 541 | 2.43e-33 | 134 |
| MS.gene028001.t1 | MTR_8g102050 | 30.605 | 281 | 175 | 8 | 269 | 536 | 275 | 548 | 1.31e-26 | 114 |
| MS.gene028001.t1 | MTR_7g101050 | 31.970 | 269 | 163 | 10 | 282 | 536 | 311 | 573 | 9.97e-26 | 111 |
| MS.gene028001.t1 | MTR_2g036600 | 22.292 | 480 | 322 | 15 | 91 | 531 | 121 | 588 | 5.92e-15 | 78.2 |
| MS.gene028001.t1 | MTR_8g104740 | 28.214 | 280 | 172 | 12 | 61 | 331 | 57 | 316 | 1.04e-11 | 68.2 |
| MS.gene028001.t1 | MTR_4g052070 | 26.172 | 256 | 166 | 8 | 83 | 331 | 65 | 304 | 2.04e-11 | 67.0 |
| MS.gene028001.t1 | MTR_4g127790 | 22.905 | 358 | 238 | 11 | 207 | 530 | 32 | 385 | 2.29e-11 | 66.2 |
| MS.gene028001.t1 | MTR_4g120810 | 27.358 | 318 | 194 | 14 | 22 | 331 | 26 | 314 | 2.36e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028001.t1 | AT4G31180 | 63.250 | 517 | 180 | 2 | 33 | 539 | 42 | 558 | 0.0 | 678 |
| MS.gene028001.t1 | AT4G31180 | 63.250 | 517 | 180 | 2 | 33 | 539 | 42 | 558 | 0.0 | 678 |
| MS.gene028001.t1 | AT4G26870 | 62.016 | 516 | 190 | 4 | 25 | 539 | 22 | 532 | 0.0 | 649 |
| MS.gene028001.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 106 | 562 | 3.45e-31 | 127 |
| MS.gene028001.t1 | AT4G17300 | 25.352 | 497 | 283 | 16 | 86 | 534 | 126 | 582 | 4.16e-31 | 127 |
| MS.gene028001.t1 | AT5G56680 | 29.603 | 277 | 175 | 8 | 273 | 536 | 300 | 569 | 1.36e-27 | 117 |
| MS.gene028001.t1 | AT1G70980 | 29.710 | 276 | 172 | 8 | 276 | 536 | 300 | 568 | 2.40e-25 | 110 |
| MS.gene028001.t1 | AT3G07420 | 23.792 | 269 | 191 | 8 | 273 | 532 | 368 | 631 | 2.39e-11 | 67.0 |
| MS.gene028001.t1 | AT4G33760 | 29.600 | 250 | 152 | 9 | 88 | 331 | 87 | 318 | 7.59e-11 | 65.5 |
Find 120 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGATACTTCTTACATTTC+TGG | 0.087614 | 5.2:-19269404 | None:intergenic |
| CTTATTACATTGATGCTTTC+AGG | 0.115749 | 5.2:+19270780 | MS.gene028001:CDS |
| CACACTCCAAAGTTGATTAA+TGG | 0.180357 | 5.2:+19269013 | MS.gene028001:CDS |
| TTCTAGAAGCATCCTCTATT+TGG | 0.181059 | 5.2:-19268400 | None:intergenic |
| GCACGTTCTTCTAACAATTT+TGG | 0.190994 | 5.2:-19270725 | None:intergenic |
| GACCCCTTAGCCACCAATTA+TGG | 0.254007 | 5.2:+19267873 | MS.gene028001:CDS |
| ATTCCGGCTACTCCTATTAA+AGG | 0.274375 | 5.2:+19268185 | MS.gene028001:CDS |
| TATTTCCACGTGACCCAAAA+AGG | 0.306266 | 5.2:+19271041 | MS.gene028001:CDS |
| TAATGGGATGTTGCCATAAT+TGG | 0.313034 | 5.2:-19267886 | None:intergenic |
| AGGCATCTGTGTGAGTTTAC+TGG | 0.353312 | 5.2:+19269199 | MS.gene028001:CDS |
| TTAGGTGAGGAGATAATTTC+AGG | 0.358661 | 5.2:+19270683 | MS.gene028001:intron |
| AAGTGCTTTGACCTGGGTCC+GGG | 0.362290 | 5.2:-19267946 | None:intergenic |
| TTGGATTGGAGCTCCTCTAA+TGG | 0.364039 | 5.2:-19267903 | None:intergenic |
| TGCTGAGTGGTGCCTTTAAT+AGG | 0.368885 | 5.2:-19268197 | None:intergenic |
| CAAGTGCTTTGACCTGGGTC+CGG | 0.371135 | 5.2:-19267947 | None:intergenic |
| CGGAAAATTCCTTGATTAGC+TGG | 0.377962 | 5.2:-19268729 | None:intergenic |
| GACGGGATGGACCGGTGTCT+TGG | 0.378797 | 5.2:-19267922 | None:intergenic |
| TGGTGGCTTTGGCGCAGGCT+TGG | 0.380508 | 5.2:+19270967 | MS.gene028001:CDS |
| TCATGGCGTTGTTTCCATTC+CGG | 0.380729 | 5.2:+19268169 | MS.gene028001:CDS |
| ATCTGCTCACTCACTGAATC+AGG | 0.382002 | 5.2:-19268101 | None:intergenic |
| ACCGATACCCTTTGGCCATA+AGG | 0.383226 | 5.2:+19270416 | MS.gene028001:CDS |
| TGGTGCAGGCTCTTTGCACT+TGG | 0.383919 | 5.2:-19267730 | None:intergenic |
| GCACCACTGCATGGTGGCTT+TGG | 0.390476 | 5.2:+19270956 | MS.gene028001:CDS |
| CTAGATCCATTAATCAACTT+TGG | 0.392041 | 5.2:-19269019 | None:intergenic |
| ACAACTTGTTCGTGTGAATC+AGG | 0.394922 | 5.2:+19268668 | MS.gene028001:CDS |
| CTCTATTTGGAAGGGTAAAA+CGG | 0.398471 | 5.2:-19268387 | None:intergenic |
| CAAAGGGCATCCTGCATGCC+TGG | 0.401678 | 5.2:+19269075 | MS.gene028001:CDS |
| CTGCATGGTGGCTTTGGCGC+AGG | 0.403327 | 5.2:+19270962 | MS.gene028001:CDS |
| GAGTCTGTGGTGGACGTTCA+TGG | 0.408170 | 5.2:+19268152 | MS.gene028001:CDS |
| AGCATCAATGTAATAAGATA+TGG | 0.416066 | 5.2:-19270774 | None:intergenic |
| TATCCTTCACCGATACCCTT+TGG | 0.424104 | 5.2:+19270408 | MS.gene028001:CDS |
| TTATGGCAACATCCCATTAG+AGG | 0.429972 | 5.2:+19267890 | MS.gene028001:CDS |
| TGGATTGGAGCTCCTCTAAT+GGG | 0.435677 | 5.2:-19267902 | None:intergenic |
| CGGCCATTTGTTGCCGATGT+CGG | 0.439008 | 5.2:-19267815 | None:intergenic |
| CATTGTATAGAACGGCCTTA+TGG | 0.447659 | 5.2:-19270431 | None:intergenic |
| GACGATGATGGTGCTGGTGC+AGG | 0.454321 | 5.2:-19267744 | None:intergenic |
| GGAGTAGAAATTGAGCCTTT+TGG | 0.454350 | 5.2:+19270223 | MS.gene028001:CDS |
| TGAATATGACAGGGCCAGTC+AGG | 0.454741 | 5.2:+19268430 | MS.gene028001:CDS |
| TCTATTTGGAAGGGTAAAAC+GGG | 0.465770 | 5.2:-19268386 | None:intergenic |
| GATGGACCGGTGTCTTGGAT+TGG | 0.465944 | 5.2:-19267917 | None:intergenic |
| GTGAATTGAAATGAAGTCTT+CGG | 0.483974 | 5.2:-19268993 | None:intergenic |
| TATTAAAGGCACCACTCAGC+AGG | 0.490348 | 5.2:+19268199 | MS.gene028001:CDS |
| CTAAATTGTATTGTGTGAGT+AGG | 0.490707 | 5.2:+19268357 | MS.gene028001:CDS |
| AGTGCTTTGACCTGGGTCCG+GGG | 0.493434 | 5.2:-19267945 | None:intergenic |
| GCTCCGACATCGGCAACAAA+TGG | 0.503015 | 5.2:+19267812 | MS.gene028001:CDS |
| TTGCCATAATTGGTGGCTAA+GGG | 0.506950 | 5.2:-19267876 | None:intergenic |
| GTACCTTTAGCGGTTCGAAT+GGG | 0.507990 | 5.2:-19269446 | None:intergenic |
| AATAATTCAGTTAGAATTCG+AGG | 0.508512 | 5.2:+19267984 | MS.gene028001:CDS |
| ATGTCGGAGCTTTACCAGCT+TGG | 0.509633 | 5.2:-19267799 | None:intergenic |
| GGTGCAGGCTCTTTGCACTT+GGG | 0.512211 | 5.2:-19267729 | None:intergenic |
| ACCTCAACTTCACAAGCAAA+TGG | 0.513847 | 5.2:+19269105 | MS.gene028001:CDS |
| GAAGTGAAGCTGAATATGAC+AGG | 0.516656 | 5.2:+19268420 | MS.gene028001:CDS |
| AATCGTCAAGTGCTTTGACC+TGG | 0.518195 | 5.2:-19267953 | None:intergenic |
| GCGCCAAAGCCACCATGCAG+TGG | 0.521064 | 5.2:-19270959 | None:intergenic |
| GATTGACTGCCACTATTTCG+AGG | 0.521814 | 5.2:+19269240 | MS.gene028001:CDS |
| ATCGTCAAGTGCTTTGACCT+GGG | 0.521979 | 5.2:-19267952 | None:intergenic |
| CTTCAACATTATCCGCAATA+CGG | 0.524897 | 5.2:-19268749 | None:intergenic |
| AGTACCTTTAGCGGTTCGAA+TGG | 0.527085 | 5.2:-19269447 | None:intergenic |
| CACCGGTCCATCCCGTCCCC+CGG | 0.527914 | 5.2:+19267928 | MS.gene028001:CDS |
| TCGGAGCTTTACCAGCTTGG+CGG | 0.531299 | 5.2:-19267796 | None:intergenic |
| TTGCAAACACCAGCTAATCA+AGG | 0.532269 | 5.2:+19268720 | MS.gene028001:CDS |
| AACGCCATCTTCTTACTCAC+TGG | 0.532690 | 5.2:-19268026 | None:intergenic |
| GCCTTATGGCCAAAGGGTAT+CGG | 0.533082 | 5.2:-19270417 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.536741 | 5.2:-19270238 | None:intergenic |
| GTTGCCATAATTGGTGGCTA+AGG | 0.537422 | 5.2:-19267877 | None:intergenic |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 5.2:-19269093 | None:intergenic |
| ACAGATATACCTCGAAATAG+TGG | 0.539941 | 5.2:-19269249 | None:intergenic |
| CAGAGGATTCCTTTACTCAC+AGG | 0.542220 | 5.2:+19269179 | MS.gene028001:CDS |
| ACACAGATGCCTGTGAGTAA+AGG | 0.545161 | 5.2:-19269188 | None:intergenic |
| GCCATTTGCTTGTGAAGTTG+AGG | 0.546111 | 5.2:-19269106 | None:intergenic |
| AGAAGCATCCTCTATTTGGA+AGG | 0.546640 | 5.2:-19268396 | None:intergenic |
| TAAATTGTATTGTGTGAGTA+GGG | 0.550079 | 5.2:+19268358 | MS.gene028001:CDS |
| CTGCGGCTTACATACGAAGA+AGG | 0.554330 | 5.2:+19269670 | MS.gene028001:CDS |
| CAAAGCACTTGACGATTCAC+TGG | 0.554919 | 5.2:+19267959 | MS.gene028001:CDS |
| AGCTCTCAGCCGTGAGTCTG+TGG | 0.557460 | 5.2:+19268139 | MS.gene028001:CDS |
| TGGCCAAAGGGTATCGGTGA+AGG | 0.560167 | 5.2:-19270411 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.560588 | 5.2:-19269085 | None:intergenic |
| TTTAATAGGAGTAGCCGGAA+TGG | 0.564133 | 5.2:-19268183 | None:intergenic |
| AGCTGGTAAAGCTCCGACAT+CGG | 0.569312 | 5.2:+19267802 | MS.gene028001:CDS |
| GTACCCATTCGAACCGCTAA+AGG | 0.573542 | 5.2:+19269443 | MS.gene028001:CDS |
| ACTGAAGCTGAAAGGAAACT+AGG | 0.576789 | 5.2:+19270256 | MS.gene028001:CDS |
| GTCGGTGCAATGTACCTGAC+TGG | 0.577872 | 5.2:-19268444 | None:intergenic |
| CACAAGCAAATGGCAATATG+TGG | 0.581777 | 5.2:+19269115 | MS.gene028001:CDS |
| TCTGATGATTCCGACGATGA+TGG | 0.583276 | 5.2:-19267756 | None:intergenic |
| GTGCCTTTAATAGGAGTAGC+CGG | 0.584656 | 5.2:-19268188 | None:intergenic |
| GTTGATTAATGGATCTAGTG+AGG | 0.586296 | 5.2:+19269024 | MS.gene028001:CDS |
| GTGCTTTGACCTGGGTCCGG+GGG | 0.586355 | 5.2:-19267944 | None:intergenic |
| GACAGAGGTAGTAGCAGCGG+CGG | 0.587288 | 5.2:-19267835 | None:intergenic |
| GATTCCGACGATGATGGTGC+TGG | 0.590858 | 5.2:-19267750 | None:intergenic |
| AGAACGGCCTTATGGCCAAA+GGG | 0.597615 | 5.2:-19270423 | None:intergenic |
| GAGCAAGGCATTGTATAGAA+CGG | 0.599279 | 5.2:-19270439 | None:intergenic |
| TGTTGAAACTGTACAGTGCT+TGG | 0.600109 | 5.2:+19268067 | MS.gene028001:CDS |
| TCGTTTGACGTCTTTATCCG+TGG | 0.600195 | 5.2:+19270484 | MS.gene028001:CDS |
| ACTTGAATACTGAAGCTGAA+AGG | 0.602852 | 5.2:+19270248 | MS.gene028001:CDS |
| AGAGACAGAGGTAGTAGCAG+CGG | 0.604458 | 5.2:-19267838 | None:intergenic |
| ACGACCAGTGAGTAAGAAGA+TGG | 0.608825 | 5.2:+19268022 | MS.gene028001:CDS |
| TGGGATGTTGCCATAATTGG+TGG | 0.610485 | 5.2:-19267883 | None:intergenic |
| TGCTGAGAGATTAGAGACAG+AGG | 0.613637 | 5.2:-19267850 | None:intergenic |
| ATAATTCAGTTAGAATTCGA+GGG | 0.614687 | 5.2:+19267985 | MS.gene028001:CDS |
| ATTAATGGATCTAGTGAGGG+TGG | 0.615216 | 5.2:+19269028 | MS.gene028001:CDS |
| TGCACCAGCACCATCATCGT+CGG | 0.615748 | 5.2:+19267746 | MS.gene028001:CDS |
| TAGAACGGCCTTATGGCCAA+AGG | 0.615833 | 5.2:-19270424 | None:intergenic |
| TTGATTAATGGATCTAGTGA+GGG | 0.619081 | 5.2:+19269025 | MS.gene028001:CDS |
| AGATATGGTGCACCACTGCA+TGG | 0.619194 | 5.2:+19270947 | MS.gene028001:intron |
| TAAGCCGCAGAGTATTTCGC+AGG | 0.624017 | 5.2:-19269657 | None:intergenic |
| GAAGCATCCTCTATTTGGAA+GGG | 0.624822 | 5.2:-19268395 | None:intergenic |
| TGCCATAATTGGTGGCTAAG+GGG | 0.625961 | 5.2:-19267875 | None:intergenic |
| TCTCAGCCGTGAGTCTGTGG+TGG | 0.626818 | 5.2:+19268142 | MS.gene028001:CDS |
| CTGGTCTTGATGCTGAAATG+CGG | 0.628437 | 5.2:+19269218 | MS.gene028001:CDS |
| GAACGTCCACCACAGACTCA+CGG | 0.631311 | 5.2:-19268148 | None:intergenic |
| AGAAGGTATTGAGATGCTCA+AGG | 0.631343 | 5.2:+19269687 | MS.gene028001:CDS |
| CGGGGCTGTGTATAGAGCAG+AGG | 0.634042 | 5.2:+19269162 | MS.gene028001:CDS |
| CGTGTTGTAATGCTCTTCTG+TGG | 0.634961 | 5.2:+19270992 | MS.gene028001:CDS |
| TGATTCAGTGAGTGAGCAGA+TGG | 0.646610 | 5.2:+19268103 | MS.gene028001:CDS |
| AGAAGTATCTTGAAGCTGTG+AGG | 0.665661 | 5.2:+19269415 | MS.gene028001:CDS |
| GGAGCTCCAATCCAAGACAC+CGG | 0.683365 | 5.2:+19267911 | MS.gene028001:CDS |
| AAGTGAAGCTGAATATGACA+GGG | 0.700528 | 5.2:+19268421 | MS.gene028001:CDS |
| ATGTCATGCGAATATTATCG+AGG | 0.703735 | 5.2:-19271015 | None:intergenic |
| TATGGTGCACCACTGCATGG+TGG | 0.757084 | 5.2:+19270950 | MS.gene028001:CDS |
| AGTACCTGCGAAATACTCTG+CGG | 0.773213 | 5.2:+19269653 | MS.gene028001:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGTAGTAAAATATTAA+GGG | - | chr5.2:19270306-19270325 | None:intergenic | 10.0% |
| !! | TATTTAGTAGTAAAATATTA+AGG | - | chr5.2:19270307-19270326 | None:intergenic | 10.0% |
| !!! | AGGTTTTTATTAGTTTTTTA+GGG | + | chr5.2:19268219-19268238 | MS.gene028001:intron | 15.0% |
| !!! | ATAACTTTTGATTGTATTTT+CGG | + | chr5.2:19268944-19268963 | MS.gene028001:intron | 15.0% |
| !!! | ATCAATTAAAATTGACATTT+TGG | + | chr5.2:19269903-19269922 | MS.gene028001:intron | 15.0% |
| !!! | ATGATTTGTCTTATTTTATT+TGG | + | chr5.2:19269328-19269347 | MS.gene028001:intron | 15.0% |
| !!! | ATTACTTTTCTAAAACTAAT+TGG | - | chr5.2:19270282-19270301 | None:intergenic | 15.0% |
| !!! | TTATTGTTGTTATTATTTTC+TGG | + | chr5.2:19270884-19270903 | MS.gene028001:intron | 15.0% |
| !!! | TTTTTAAACTGAATTACAAA+GGG | + | chr5.2:19269059-19269078 | MS.gene028001:CDS | 15.0% |
| !! | AAATAATAACAACAATAACC+AGG | - | chr5.2:19270882-19270901 | None:intergenic | 20.0% |
| !! | AATAATAACAACAATAACCA+GGG | - | chr5.2:19270881-19270900 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAATGTTCAC+AGG | - | chr5.2:19269865-19269884 | None:intergenic | 20.0% |
| !! | TGGATTTCAATTCTATTTAT+AGG | + | chr5.2:19270368-19270387 | MS.gene028001:intron | 20.0% |
| !!! | ATGTCAATGTTTTTTTGTAA+TGG | + | chr5.2:19268631-19268650 | MS.gene028001:intron | 20.0% |
| !!! | CAGGTTTTTATTAGTTTTTT+AGG | + | chr5.2:19268218-19268237 | MS.gene028001:intron | 20.0% |
| !!! | CTATTATGTAAAACTGATTT+TGG | + | chr5.2:19270348-19270367 | MS.gene028001:intron | 20.0% |
| !!! | GTCATGTTTAATATATTTTC+TGG | + | chr5.2:19268852-19268871 | MS.gene028001:intron | 20.0% |
| !!! | GTGTTATGAAAATTTGATTT+TGG | + | chr5.2:19268256-19268275 | MS.gene028001:intron | 20.0% |
| !!! | GTTTTTAAACTGAATTACAA+AGG | + | chr5.2:19269058-19269077 | MS.gene028001:CDS | 20.0% |
| !!! | TAACTTTTGATTGTATTTTC+GGG | + | chr5.2:19268945-19268964 | MS.gene028001:intron | 20.0% |
| !!! | TGTTTTAACTATGATCTAAT+TGG | + | chr5.2:19270138-19270157 | MS.gene028001:intron | 20.0% |
| !!! | TTATTTTATTTGGCAGATTA+TGG | + | chr5.2:19269338-19269357 | MS.gene028001:intron | 20.0% |
| ! | AAACATTGACATTCACATAA+AGG | - | chr5.2:19268623-19268642 | None:intergenic | 25.0% |
| ! | AAATTAAGACTAGAAGACTT+CGG | - | chr5.2:19270054-19270073 | None:intergenic | 25.0% |
| ! | AATAATTCAGTTAGAATTCG+AGG | + | chr5.2:19267984-19268003 | MS.gene028001:CDS | 25.0% |
| ! | AGCATCAATGTAATAAGATA+TGG | - | chr5.2:19270777-19270796 | None:intergenic | 25.0% |
| ! | ATAATTCAGTTAGAATTCGA+GGG | + | chr5.2:19267985-19268004 | MS.gene028001:CDS | 25.0% |
| ! | CAAACTCATCAAAATAACAT+TGG | - | chr5.2:19268805-19268824 | None:intergenic | 25.0% |
| ! | TAAACTATTCAACTTGTAAG+TGG | + | chr5.2:19269725-19269744 | MS.gene028001:intron | 25.0% |
| ! | TAAATTGTATTGTGTGAGTA+GGG | + | chr5.2:19268358-19268377 | MS.gene028001:CDS | 25.0% |
| ! | TCAAATCAAACAACAATAAC+AGG | - | chr5.2:19270641-19270660 | None:intergenic | 25.0% |
| !! | TATTAATGATTTTGCTTTGC+AGG | + | chr5.2:19270195-19270214 | MS.gene028001:intron | 25.0% |
| !!! | ACGTTTGTTGTATATAGATT+CGG | + | chr5.2:19268550-19268569 | MS.gene028001:intron | 25.0% |
| !!! | CAAAAAAAAAGTACCTTTAG+CGG | - | chr5.2:19269459-19269478 | None:intergenic | 25.0% |
| !!! | CTAGTCTTAATTTTCTCTTA+TGG | + | chr5.2:19270061-19270080 | MS.gene028001:intron | 25.0% |
| !!! | GTGGTTTTAAATTATTGATC+TGG | - | chr5.2:19268506-19268525 | None:intergenic | 25.0% |
| AACACAAATCTTAATCAGTG+TGG | - | chr5.2:19268525-19268544 | None:intergenic | 30.0% | |
| ACAGGAAACTTGAGATTTAA+TGG | - | chr5.2:19270623-19270642 | None:intergenic | 30.0% | |
| AGACAAATCATCAGTAAATC+AGG | - | chr5.2:19269319-19269338 | None:intergenic | 30.0% | |
| CAAGATACTTCTTACATTTC+TGG | - | chr5.2:19269407-19269426 | None:intergenic | 30.0% | |
| CGTGATAAAAGAAAGACTAA+AGG | - | chr5.2:19269788-19269807 | None:intergenic | 30.0% | |
| CTAAATTGTATTGTGTGAGT+AGG | + | chr5.2:19268357-19268376 | MS.gene028001:CDS | 30.0% | |
| CTAGATCCATTAATCAACTT+TGG | - | chr5.2:19269022-19269041 | None:intergenic | 30.0% | |
| CTTATTACATTGATGCTTTC+AGG | + | chr5.2:19270780-19270799 | MS.gene028001:CDS | 30.0% | |
| GTGAATTGAAATGAAGTCTT+CGG | - | chr5.2:19268996-19269015 | None:intergenic | 30.0% | |
| TCATAGTTGATCTTATGTAG+TGG | + | chr5.2:19269484-19269503 | MS.gene028001:intron | 30.0% | |
| TTAACTATGATCTAATTGGC+TGG | + | chr5.2:19270142-19270161 | MS.gene028001:intron | 30.0% | |
| TTTCTCTTATGGATAGTTCT+AGG | + | chr5.2:19270072-19270091 | MS.gene028001:intron | 30.0% | |
| ! | TGTGTGGTTTTCTTCATTAT+AGG | + | chr5.2:19268319-19268338 | MS.gene028001:intron | 30.0% |
| ! | TTGATTAATGGATCTAGTGA+GGG | + | chr5.2:19269025-19269044 | MS.gene028001:CDS | 30.0% |
| !! | AATGGAAGTGCTAATACATT+TGG | - | chr5.2:19270605-19270624 | None:intergenic | 30.0% |
| !! | CTATATATTTGTTGTCGCTT+AGG | + | chr5.2:19270665-19270684 | MS.gene028001:intron | 30.0% |
| !! | TGATTTTAACCGTGTTTTTG+AGG | + | chr5.2:19269138-19269157 | MS.gene028001:CDS | 30.0% |
| !!! | TGTTTTTTTGTAATGGATGC+AGG | + | chr5.2:19268638-19268657 | MS.gene028001:intron | 30.0% |
| AAACCAACTGGAAATTGGTT+AGG | + | chr5.2:19269986-19270005 | MS.gene028001:intron | 35.0% | |
| AAGTGAAGCTGAATATGACA+GGG | + | chr5.2:19268421-19268440 | MS.gene028001:CDS | 35.0% | |
| AATGTGTGATCTTCCAGATA+TGG | + | chr5.2:19270932-19270951 | MS.gene028001:intron | 35.0% | |
| ACAGATATACCTCGAAATAG+TGG | - | chr5.2:19269252-19269271 | None:intergenic | 35.0% | |
| ACTAATAAAAACCTGCTGAG+TGG | - | chr5.2:19268213-19268232 | None:intergenic | 35.0% | |
| ACTTGAATACTGAAGCTGAA+AGG | + | chr5.2:19270248-19270267 | MS.gene028001:CDS | 35.0% | |
| AGTAGAGACATCCTAAACAT+AGG | - | chr5.2:19270852-19270871 | None:intergenic | 35.0% | |
| AGTGTGAGTTGCATTGTTTA+GGG | + | chr5.2:19268279-19268298 | MS.gene028001:intron | 35.0% | |
| ATGTCATGCGAATATTATCG+AGG | - | chr5.2:19271018-19271037 | None:intergenic | 35.0% | |
| CTCTATTTGGAAGGGTAAAA+CGG | - | chr5.2:19268390-19268409 | None:intergenic | 35.0% | |
| CTTCAACATTATCCGCAATA+CGG | - | chr5.2:19268752-19268771 | None:intergenic | 35.0% | |
| GTCTCCAGAAAACATTTCAT+CGG | + | chr5.2:19269961-19269980 | MS.gene028001:intron | 35.0% | |
| TAATGGGATGTTGCCATAAT+TGG | - | chr5.2:19267889-19267908 | None:intergenic | 35.0% | |
| TATGATGGTATTGTGTTGTG+TGG | + | chr5.2:19268303-19268322 | MS.gene028001:intron | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | - | chr5.2:19270241-19270260 | None:intergenic | 35.0% | |
| TCTATTTGGAAGGGTAAAAC+GGG | - | chr5.2:19268389-19268408 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATTTC+AGG | + | chr5.2:19270683-19270702 | MS.gene028001:intron | 35.0% | |
| ! | ATACATTTGGAGAAGCATGA+CGG | - | chr5.2:19270592-19270611 | None:intergenic | 35.0% |
| ! | CACACTCCAAAGTTGATTAA+TGG | + | chr5.2:19269013-19269032 | MS.gene028001:CDS | 35.0% |
| ! | CAGTTTCAACATTTTCTCTG+AGG | - | chr5.2:19268058-19268077 | None:intergenic | 35.0% |
| ! | CTTGTTGTATCTTCTTACCA+CGG | - | chr5.2:19270504-19270523 | None:intergenic | 35.0% |
| ! | GCACGTTCTTCTAACAATTT+TGG | - | chr5.2:19270728-19270747 | None:intergenic | 35.0% |
| ! | GTGGTTTTCTTCATTATAGG+TGG | + | chr5.2:19268322-19268341 | MS.gene028001:intron | 35.0% |
| ! | GTTGATTAATGGATCTAGTG+AGG | + | chr5.2:19269024-19269043 | MS.gene028001:CDS | 35.0% |
| ! | TCAAGGAATTTTCCGTATTG+CGG | + | chr5.2:19268737-19268756 | MS.gene028001:CDS | 35.0% |
| ! | TGCATTGTTTAGGGTTATGA+TGG | + | chr5.2:19268288-19268307 | MS.gene028001:intron | 35.0% |
| ! | TGTCGCTTATACCTATGTTT+AGG | + | chr5.2:19270838-19270857 | MS.gene028001:intron | 35.0% |
| ! | TGTGTGTTTGAAATCGTTGA+GGG | + | chr5.2:19269287-19269306 | MS.gene028001:intron | 35.0% |
| ! | TTGTGTGTTTGAAATCGTTG+AGG | + | chr5.2:19269286-19269305 | MS.gene028001:intron | 35.0% |
| ! | TTTGCCGATGAAATGTTTTC+TGG | - | chr5.2:19269968-19269987 | None:intergenic | 35.0% |
| !! | TTCTAGAAGCATCCTCTATT+TGG | - | chr5.2:19268403-19268422 | None:intergenic | 35.0% |
| !! | TTTTGATTGTATTTTCGGGC+AGG | + | chr5.2:19268949-19268968 | MS.gene028001:intron | 35.0% |
| !!! | TAGTTTTGATCATCAGAGCA+AGG | - | chr5.2:19270457-19270476 | None:intergenic | 35.0% |
| !!! | TTTAACCGTGTTTTTGAGGT+CGG | + | chr5.2:19269142-19269161 | MS.gene028001:CDS | 35.0% |
| ACCTCAACTTCACAAGCAAA+TGG | + | chr5.2:19269105-19269124 | MS.gene028001:CDS | 40.0% | |
| ACTGAAGCTGAAAGGAAACT+AGG | + | chr5.2:19270256-19270275 | MS.gene028001:CDS | 40.0% | |
| ATTCCGGCTACTCCTATTAA+AGG | + | chr5.2:19268185-19268204 | MS.gene028001:CDS | 40.0% | |
| ATTTCATCGGCAAAACCAAC+TGG | + | chr5.2:19269974-19269993 | MS.gene028001:intron | 40.0% | |
| CACAAGCAAATGGCAATATG+TGG | + | chr5.2:19269115-19269134 | MS.gene028001:CDS | 40.0% | |
| CATTGTATAGAACGGCCTTA+TGG | - | chr5.2:19270434-19270453 | None:intergenic | 40.0% | |
| CGACTGTTCATCGTTAGTTA+CGG | + | chr5.2:19268463-19268482 | MS.gene028001:intron | 40.0% | |
| CGGAAAATTCCTTGATTAGC+TGG | - | chr5.2:19268732-19268751 | None:intergenic | 40.0% | |
| CGTAACTAACGATGAACAGT+CGG | - | chr5.2:19268465-19268484 | None:intergenic | 40.0% | |
| GAAGTGAAGCTGAATATGAC+AGG | + | chr5.2:19268420-19268439 | MS.gene028001:CDS | 40.0% | |
| GAGTGTGAGTTGCATTGTTT+AGG | + | chr5.2:19268278-19268297 | MS.gene028001:intron | 40.0% | |
| TATTTCCACGTGACCCAAAA+AGG | + | chr5.2:19271041-19271060 | MS.gene028001:CDS | 40.0% | |
| TGTTGAAACTGTACAGTGCT+TGG | + | chr5.2:19268067-19268086 | MS.gene028001:CDS | 40.0% | |
| TTAAGACTAGAAGACTTCGG+AGG | - | chr5.2:19270051-19270070 | None:intergenic | 40.0% | |
| TTATGGCAACATCCCATTAG+AGG | + | chr5.2:19267890-19267909 | MS.gene028001:CDS | 40.0% | |
| TTGCAAACACCAGCTAATCA+AGG | + | chr5.2:19268720-19268739 | MS.gene028001:CDS | 40.0% | |
| TTTAATAGGAGTAGCCGGAA+TGG | - | chr5.2:19268186-19268205 | None:intergenic | 40.0% | |
| ! | ACAACTTGTTCGTGTGAATC+AGG | + | chr5.2:19268668-19268687 | MS.gene028001:CDS | 40.0% |
| ! | ATTAATGGATCTAGTGAGGG+TGG | + | chr5.2:19269028-19269047 | MS.gene028001:CDS | 40.0% |
| ! | CGTTTTACCCTTCCAAATAG+AGG | + | chr5.2:19268388-19268407 | MS.gene028001:CDS | 40.0% |
| ! | GAAGCATCCTCTATTTGGAA+GGG | - | chr5.2:19268398-19268417 | None:intergenic | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | + | chr5.2:19270202-19270221 | MS.gene028001:intron | 40.0% |
| ! | GGAGTAGAAATTGAGCCTTT+TGG | + | chr5.2:19270223-19270242 | MS.gene028001:CDS | 40.0% |
| ! | GTGTGTTTGAAATCGTTGAG+GGG | + | chr5.2:19269288-19269307 | MS.gene028001:intron | 40.0% |
| ! | TTGCCATAATTGGTGGCTAA+GGG | - | chr5.2:19267879-19267898 | None:intergenic | 40.0% |
| !! | AGAAGCATCCTCTATTTGGA+AGG | - | chr5.2:19268399-19268418 | None:intergenic | 40.0% |
| !! | AGAAGGTATTGAGATGCTCA+AGG | + | chr5.2:19269687-19269706 | MS.gene028001:CDS | 40.0% |
| !! | AGAAGTATCTTGAAGCTGTG+AGG | + | chr5.2:19269415-19269434 | MS.gene028001:CDS | 40.0% |
| !! | ATGGAGTTAAGGCACTGATA+AGG | + | chr5.2:19269834-19269853 | MS.gene028001:intron | 40.0% |
| !! | GAGCAAGGCATTGTATAGAA+CGG | - | chr5.2:19270442-19270461 | None:intergenic | 40.0% |
| !! | TATTTGTTGTCGCTTAGGTG+AGG | + | chr5.2:19270670-19270689 | MS.gene028001:intron | 40.0% |
| !!! | TTAACCGTGTTTTTGAGGTC+GGG | + | chr5.2:19269143-19269162 | MS.gene028001:CDS | 40.0% |
| !!! | TTTTTGTAATGGATGCAGGC+TGG | + | chr5.2:19268642-19268661 | MS.gene028001:intron | 40.0% |
| AACGCCATCTTCTTACTCAC+TGG | - | chr5.2:19268029-19268048 | None:intergenic | 45.0% | |
| AAGCGACACTCAATGCTACA+TGG | - | chr5.2:19270826-19270845 | None:intergenic | 45.0% | |
| AAGTAAAAAAGCCGCCAAGC+TGG | + | chr5.2:19267785-19267804 | MS.gene028001:CDS | 45.0% | |
| AATCGTCAAGTGCTTTGACC+TGG | - | chr5.2:19267956-19267975 | None:intergenic | 45.0% | |
| ACACAGATGCCTGTGAGTAA+AGG | - | chr5.2:19269191-19269210 | None:intergenic | 45.0% | |
| ACATGCCAGCATCCTTTACA+GGG | - | chr5.2:19269931-19269950 | None:intergenic | 45.0% | |
| ACGACCAGTGAGTAAGAAGA+TGG | + | chr5.2:19268022-19268041 | MS.gene028001:CDS | 45.0% | |
| ACTGCAGATTCACAGGGTTA+TGG | - | chr5.2:19269636-19269655 | None:intergenic | 45.0% | |
| AGGCATCTGTGTGAGTTTAC+TGG | + | chr5.2:19269199-19269218 | MS.gene028001:CDS | 45.0% | |
| AGTACCTGCGAAATACTCTG+CGG | + | chr5.2:19269653-19269672 | MS.gene028001:intron | 45.0% | |
| AGTACCTTTAGCGGTTCGAA+TGG | - | chr5.2:19269450-19269469 | None:intergenic | 45.0% | |
| ATCACGACGCTGAGTTAGAA+AGG | + | chr5.2:19269802-19269821 | MS.gene028001:intron | 45.0% | |
| ATCGTCAAGTGCTTTGACCT+GGG | - | chr5.2:19267955-19267974 | None:intergenic | 45.0% | |
| ATCTGCTCACTCACTGAATC+AGG | - | chr5.2:19268104-19268123 | None:intergenic | 45.0% | |
| ATGTCTCTACTACTGAACCC+TGG | + | chr5.2:19270861-19270880 | MS.gene028001:intron | 45.0% | |
| CAGAGGATTCCTTTACTCAC+AGG | + | chr5.2:19269179-19269198 | MS.gene028001:CDS | 45.0% | |
| CGGCAAAACCAACTGGAAAT+TGG | + | chr5.2:19269981-19270000 | MS.gene028001:intron | 45.0% | |
| CGTGTTGTAATGCTCTTCTG+TGG | + | chr5.2:19270992-19271011 | MS.gene028001:CDS | 45.0% | |
| GAGCCTAACCAATTTCCAGT+TGG | - | chr5.2:19269992-19270011 | None:intergenic | 45.0% | |
| GATTGACTGCCACTATTTCG+AGG | + | chr5.2:19269240-19269259 | MS.gene028001:CDS | 45.0% | |
| GCCATTTGCTTGTGAAGTTG+AGG | - | chr5.2:19269109-19269128 | None:intergenic | 45.0% | |
| GTACCTTTAGCGGTTCGAAT+GGG | - | chr5.2:19269449-19269468 | None:intergenic | 45.0% | |
| GTGCCTTTAATAGGAGTAGC+CGG | - | chr5.2:19268191-19268210 | None:intergenic | 45.0% | |
| TATCCTTCACCGATACCCTT+TGG | + | chr5.2:19270408-19270427 | MS.gene028001:CDS | 45.0% | |
| TCGAGGTATATCTGTCACAC+TGG | + | chr5.2:19269257-19269276 | MS.gene028001:intron | 45.0% | |
| TCGTTTGACGTCTTTATCCG+TGG | + | chr5.2:19270484-19270503 | MS.gene028001:CDS | 45.0% | |
| TCTGATGATTCCGACGATGA+TGG | - | chr5.2:19267759-19267778 | None:intergenic | 45.0% | |
| TGATTCAGTGAGTGAGCAGA+TGG | + | chr5.2:19268103-19268122 | MS.gene028001:CDS | 45.0% | |
| TGCTGAGAGATTAGAGACAG+AGG | - | chr5.2:19267853-19267872 | None:intergenic | 45.0% | |
| TGCTGAGTGGTGCCTTTAAT+AGG | - | chr5.2:19268200-19268219 | None:intergenic | 45.0% | |
| TGGGATGTTGCCATAATTGG+TGG | - | chr5.2:19267886-19267905 | None:intergenic | 45.0% | |
| ! | CAAAGCACTTGACGATTCAC+TGG | + | chr5.2:19267959-19267978 | MS.gene028001:CDS | 45.0% |
| ! | GTTGCCATAATTGGTGGCTA+AGG | - | chr5.2:19267880-19267899 | None:intergenic | 45.0% |
| ! | TCATGGCGTTGTTTCCATTC+CGG | + | chr5.2:19268169-19268188 | MS.gene028001:CDS | 45.0% |
| ! | TGCCATAATTGGTGGCTAAG+GGG | - | chr5.2:19267878-19267897 | None:intergenic | 45.0% |
| ! | TGGATTGGAGCTCCTCTAAT+GGG | - | chr5.2:19267905-19267924 | None:intergenic | 45.0% |
| ! | TTGGATTGGAGCTCCTCTAA+TGG | - | chr5.2:19267906-19267925 | None:intergenic | 45.0% |
| !! | CTGGTCTTGATGCTGAAATG+CGG | + | chr5.2:19269218-19269237 | MS.gene028001:CDS | 45.0% |
| !! | TATTAAAGGCACCACTCAGC+AGG | + | chr5.2:19268199-19268218 | MS.gene028001:CDS | 45.0% |
| !!! | GACATTTTGGAGCCCTGTAA+AGG | + | chr5.2:19269916-19269935 | MS.gene028001:intron | 45.0% |
| !!! | GTAATCCTTTTTGGGTCACG+TGG | - | chr5.2:19271049-19271068 | None:intergenic | 45.0% |
| !!! | TAACCGTGTTTTTGAGGTCG+GGG | + | chr5.2:19269144-19269163 | MS.gene028001:CDS | 45.0% |
| ACACCCTAGGACAGAACAGT+GGG | - | chr5.2:19270014-19270033 | None:intergenic | 50.0% | |
| ACCGATACCCTTTGGCCATA+AGG | + | chr5.2:19270416-19270435 | MS.gene028001:CDS | 50.0% | |
| ACGACGCTGAGTTAGAAAGG+TGG | + | chr5.2:19269805-19269824 | MS.gene028001:intron | 50.0% | |
| AGAGACAGAGGTAGTAGCAG+CGG | - | chr5.2:19267841-19267860 | None:intergenic | 50.0% | |
| AGATATGGTGCACCACTGCA+TGG | + | chr5.2:19270947-19270966 | MS.gene028001:intron | 50.0% | |
| AGCTGGTAAAGCTCCGACAT+CGG | + | chr5.2:19267802-19267821 | MS.gene028001:CDS | 50.0% | |
| ATGCAGTGGTGCACCATATC+TGG | - | chr5.2:19270948-19270967 | None:intergenic | 50.0% | |
| ATGTCGGAGCTTTACCAGCT+TGG | - | chr5.2:19267802-19267821 | None:intergenic | 50.0% | |
| CACATGCCAGCATCCTTTAC+AGG | - | chr5.2:19269932-19269951 | None:intergenic | 50.0% | |
| CGACGCTGAGTTAGAAAGGT+GGG | + | chr5.2:19269806-19269825 | MS.gene028001:intron | 50.0% | |
| CTGCGGCTTACATACGAAGA+AGG | + | chr5.2:19269670-19269689 | MS.gene028001:CDS | 50.0% | |
| GACCCCTTAGCCACCAATTA+TGG | + | chr5.2:19267873-19267892 | MS.gene028001:CDS | 50.0% | |
| GTACCCATTCGAACCGCTAA+AGG | + | chr5.2:19269443-19269462 | MS.gene028001:CDS | 50.0% | |
| GTTAGAAAGGTGGGAGGTGA+TGG | + | chr5.2:19269815-19269834 | MS.gene028001:intron | 50.0% | |
| TGAATATGACAGGGCCAGTC+AGG | + | chr5.2:19268430-19268449 | MS.gene028001:CDS | 50.0% | |
| ! | AGAACGGCCTTATGGCCAAA+GGG | - | chr5.2:19270426-19270445 | None:intergenic | 50.0% |
| ! | GCAGGTACTGCAGATTCACA+GGG | - | chr5.2:19269642-19269661 | None:intergenic | 50.0% |
| ! | GCCTTATGGCCAAAGGGTAT+CGG | - | chr5.2:19270420-19270439 | None:intergenic | 50.0% |
| ! | TAAGCCGCAGAGTATTTCGC+AGG | - | chr5.2:19269660-19269679 | None:intergenic | 50.0% |
| ! | TAGAACGGCCTTATGGCCAA+AGG | - | chr5.2:19270427-19270446 | None:intergenic | 50.0% |
| AAGTGCTTTGACCTGGGTCC+GGG | - | chr5.2:19267949-19267968 | None:intergenic | 55.0% | |
| CAAGTGCTTTGACCTGGGTC+CGG | - | chr5.2:19267950-19267969 | None:intergenic | 55.0% | |
| CACACCCTAGGACAGAACAG+TGG | - | chr5.2:19270015-19270034 | None:intergenic | 55.0% | |
| CAGCCCCGACCTCAAAAACA+CGG | - | chr5.2:19269150-19269169 | None:intergenic | 55.0% | |
| CGCTGAGTTAGAAAGGTGGG+AGG | + | chr5.2:19269809-19269828 | MS.gene028001:intron | 55.0% | |
| GAACGTCCACCACAGACTCA+CGG | - | chr5.2:19268151-19268170 | None:intergenic | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | - | chr5.2:19269096-19269115 | None:intergenic | 55.0% | |
| GACTTCGGAGGATCAGCTCT+CGG | - | chr5.2:19270039-19270058 | None:intergenic | 55.0% | |
| GATGGACCGGTGTCTTGGAT+TGG | - | chr5.2:19267920-19267939 | None:intergenic | 55.0% | |
| GCTCCCACTGTTCTGTCCTA+GGG | + | chr5.2:19270008-19270027 | MS.gene028001:intron | 55.0% | |
| GCTCCGACATCGGCAACAAA+TGG | + | chr5.2:19267812-19267831 | MS.gene028001:CDS | 55.0% | |
| GGAGCTCCAATCCAAGACAC+CGG | + | chr5.2:19267911-19267930 | MS.gene028001:CDS | 55.0% | |
| GGTGCAGGCTCTTTGCACTT+GGG | - | chr5.2:19267732-19267751 | None:intergenic | 55.0% | |
| GTCGGTGCAATGTACCTGAC+TGG | - | chr5.2:19268447-19268466 | None:intergenic | 55.0% | |
| TATGGTGCACCACTGCATGG+TGG | + | chr5.2:19270950-19270969 | MS.gene028001:CDS | 55.0% | |
| TCGGAGCTTTACCAGCTTGG+CGG | - | chr5.2:19267799-19267818 | None:intergenic | 55.0% | |
| TGCACCAGCACCATCATCGT+CGG | + | chr5.2:19267746-19267765 | MS.gene028001:CDS | 55.0% | |
| TGGAGCCCTGTAAAGGATGC+TGG | + | chr5.2:19269923-19269942 | MS.gene028001:intron | 55.0% | |
| TGGTGCAGGCTCTTTGCACT+TGG | - | chr5.2:19267733-19267752 | None:intergenic | 55.0% | |
| ! | CGCAGGTACTGCAGATTCAC+AGG | - | chr5.2:19269643-19269662 | None:intergenic | 55.0% |
| ! | CGGCCATTTGTTGCCGATGT+CGG | - | chr5.2:19267818-19267837 | None:intergenic | 55.0% |
| ! | GATTCCGACGATGATGGTGC+TGG | - | chr5.2:19267753-19267772 | None:intergenic | 55.0% |
| !! | GAGTCTGTGGTGGACGTTCA+TGG | + | chr5.2:19268152-19268171 | MS.gene028001:CDS | 55.0% |
| !! | GGTGGGAGGTGATGGAGTTA+AGG | + | chr5.2:19269823-19269842 | MS.gene028001:intron | 55.0% |
| !! | TGGCCAAAGGGTATCGGTGA+AGG | - | chr5.2:19270414-19270433 | None:intergenic | 55.0% |
| AGCTCTCAGCCGTGAGTCTG+TGG | + | chr5.2:19268139-19268158 | MS.gene028001:CDS | 60.0% | |
| AGTGCTTTGACCTGGGTCCG+GGG | - | chr5.2:19267948-19267967 | None:intergenic | 60.0% | |
| CGGGGCTGTGTATAGAGCAG+AGG | + | chr5.2:19269162-19269181 | MS.gene028001:CDS | 60.0% | |
| GACAGAGGTAGTAGCAGCGG+CGG | - | chr5.2:19267838-19267857 | None:intergenic | 60.0% | |
| GCACCACTGCATGGTGGCTT+TGG | + | chr5.2:19270956-19270975 | MS.gene028001:CDS | 60.0% | |
| GGCTCCCACTGTTCTGTCCT+AGG | + | chr5.2:19270007-19270026 | MS.gene028001:intron | 60.0% | |
| TCAGCTCTCGGTCACACCCT+AGG | - | chr5.2:19270027-19270046 | None:intergenic | 60.0% | |
| TCTCAGCCGTGAGTCTGTGG+TGG | + | chr5.2:19268142-19268161 | MS.gene028001:CDS | 60.0% | |
| !! | CAAAGGGCATCCTGCATGCC+TGG | + | chr5.2:19269075-19269094 | MS.gene028001:CDS | 60.0% |
| !! | GACGATGATGGTGCTGGTGC+AGG | - | chr5.2:19267747-19267766 | None:intergenic | 60.0% |
| GACGGGATGGACCGGTGTCT+TGG | - | chr5.2:19267925-19267944 | None:intergenic | 65.0% | |
| GCGCCAAAGCCACCATGCAG+TGG | - | chr5.2:19270962-19270981 | None:intergenic | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | - | chr5.2:19269088-19269107 | None:intergenic | 65.0% | |
| GTGCTTTGACCTGGGTCCGG+GGG | - | chr5.2:19267947-19267966 | None:intergenic | 65.0% | |
| TTTGACCTGGGTCCGGGGGA+CGG | - | chr5.2:19267943-19267962 | None:intergenic | 65.0% | |
| !! | CTGCATGGTGGCTTTGGCGC+AGG | + | chr5.2:19270962-19270981 | MS.gene028001:CDS | 65.0% |
| !! | TGGTGGCTTTGGCGCAGGCT+TGG | + | chr5.2:19270967-19270986 | MS.gene028001:CDS | 65.0% |
| TTGACCTGGGTCCGGGGGAC+GGG | - | chr5.2:19267942-19267961 | None:intergenic | 70.0% | |
| CACCGGTCCATCCCGTCCCC+CGG | + | chr5.2:19267928-19267947 | MS.gene028001:CDS | 75.0% | |
| GTCCGGGGGACGGGATGGAC+CGG | - | chr5.2:19267933-19267952 | None:intergenic | 75.0% | |
| ! | CCATCCCGTCCCCCGGACCC+AGG | + | chr5.2:19267935-19267954 | MS.gene028001:CDS | 80.0% |
| ! | CCTGGGTCCGGGGGACGGGA+TGG | - | chr5.2:19267938-19267957 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 19267720 | 19271075 | 19267720 | ID=MS.gene028001 |
| chr5.2 | mRNA | 19267720 | 19271075 | 19267720 | ID=MS.gene028001.t1;Parent=MS.gene028001 |
| chr5.2 | exon | 19267720 | 19268220 | 19267720 | ID=MS.gene028001.t1.exon1;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19267720 | 19268220 | 19267720 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19268341 | 19268451 | 19268341 | ID=MS.gene028001.t1.exon2;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19268341 | 19268451 | 19268341 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19268660 | 19268773 | 19268660 | ID=MS.gene028001.t1.exon3;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19268660 | 19268773 | 19268660 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19268971 | 19269261 | 19268971 | ID=MS.gene028001.t1.exon4;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19268971 | 19269261 | 19268971 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19269354 | 19269464 | 19269354 | ID=MS.gene028001.t1.exon5;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19269354 | 19269464 | 19269354 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19269655 | 19269708 | 19269655 | ID=MS.gene028001.t1.exon6;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19269655 | 19269708 | 19269655 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19270217 | 19270296 | 19270217 | ID=MS.gene028001.t1.exon7;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19270217 | 19270296 | 19270217 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19270390 | 19270505 | 19270390 | ID=MS.gene028001.t1.exon8;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19270390 | 19270505 | 19270390 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19270687 | 19270801 | 19270687 | ID=MS.gene028001.t1.exon9;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19270687 | 19270801 | 19270687 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| chr5.2 | exon | 19270949 | 19271075 | 19270949 | ID=MS.gene028001.t1.exon10;Parent=MS.gene028001.t1 |
| chr5.2 | CDS | 19270949 | 19271075 | 19270949 | ID=cds.MS.gene028001.t1;Parent=MS.gene028001.t1 |
| Gene Sequence |
| Protein sequence |
