Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016069.t1 | XP_003588866.1 | 93.7 | 541 | 25 | 2 | 1 | 532 | 1 | 541 | 1.50E-269 | 938.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016069.t1 | Q9M084 | 67.0 | 500 | 148 | 2 | 50 | 532 | 59 | 558 | 4.3e-196 | 685.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016069.t1 | G7I885 | 93.7 | 541 | 25 | 2 | 1 | 532 | 1 | 541 | 1.1e-269 | 938.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016069.t1 | MTR_1g014140 | 94.096 | 542 | 21 | 3 | 1 | 532 | 1 | 541 | 0.0 | 1009 |
| MS.gene016069.t1 | MTR_5g028360 | 70.221 | 544 | 134 | 6 | 1 | 532 | 62 | 589 | 0.0 | 748 |
| MS.gene016069.t1 | MTR_4g100920 | 25.304 | 494 | 287 | 16 | 78 | 527 | 86 | 541 | 3.26e-30 | 124 |
| MS.gene016069.t1 | MTR_8g102050 | 30.961 | 281 | 174 | 8 | 262 | 529 | 275 | 548 | 4.12e-26 | 112 |
| MS.gene016069.t1 | MTR_7g101050 | 31.560 | 282 | 173 | 10 | 262 | 529 | 298 | 573 | 3.43e-25 | 109 |
| MS.gene016069.t1 | MTR_2g036600 | 23.984 | 492 | 325 | 15 | 72 | 524 | 107 | 588 | 2.88e-23 | 103 |
| MS.gene016069.t1 | MTR_4g127770 | 22.811 | 491 | 319 | 15 | 78 | 524 | 601 | 1075 | 2.29e-20 | 95.9 |
| MS.gene016069.t1 | MTR_4g127790 | 23.810 | 357 | 236 | 11 | 200 | 523 | 32 | 385 | 6.19e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016069.t1 | AT4G31180 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| MS.gene016069.t1 | AT4G31180 | 63.375 | 557 | 177 | 4 | 3 | 532 | 2 | 558 | 0.0 | 722 |
| MS.gene016069.t1 | AT4G26870 | 64.648 | 512 | 173 | 3 | 26 | 532 | 24 | 532 | 0.0 | 684 |
| MS.gene016069.t1 | AT5G56680 | 30.466 | 279 | 174 | 8 | 262 | 527 | 296 | 567 | 5.37e-27 | 115 |
| MS.gene016069.t1 | AT4G17300 | 25.482 | 467 | 253 | 15 | 112 | 527 | 160 | 582 | 1.23e-26 | 114 |
| MS.gene016069.t1 | AT4G17300 | 25.482 | 467 | 253 | 15 | 112 | 527 | 140 | 562 | 1.91e-26 | 113 |
| MS.gene016069.t1 | AT1G70980 | 28.571 | 280 | 180 | 7 | 262 | 527 | 293 | 566 | 4.10e-23 | 103 |
| MS.gene016069.t1 | AT3G07420 | 24.907 | 269 | 188 | 8 | 266 | 525 | 368 | 631 | 5.94e-12 | 68.9 |
Find 130 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTACATTGATTCTTTC+AGG | 0.118251 | 1.3:-8264316 | MS.gene016069:intron |
| CAGCTTTGCGAGTTCCTTCT+TGG | 0.187183 | 1.3:+8267498 | None:intergenic |
| ATTCCAGCCGCTCCTATTAA+AGG | 0.200895 | 1.3:-8267115 | MS.gene016069:CDS |
| CACAAGCAAATGTCAATATT+TGG | 0.203397 | 1.3:-8266214 | MS.gene016069:CDS |
| TTCTTAGTCATCAGAGAAAA+TGG | 0.255342 | 1.3:-8267253 | MS.gene016069:CDS |
| CAAACAAATTAACACCTTTA+GGG | 0.270476 | 1.3:+8265871 | None:intergenic |
| TCAAAAGAGTTACTGTAGTT+TGG | 0.284688 | 1.3:+8264620 | None:intergenic |
| TATGTAAGCCGCAGAGTATT+TGG | 0.299031 | 1.3:+8265687 | None:intergenic |
| TGAAATTGAGAAGGCCATTC+AGG | 0.299926 | 1.3:-8266855 | MS.gene016069:intron |
| TGTTGTGAGGCACCTTTAAT+AGG | 0.308209 | 1.3:+8267103 | None:intergenic |
| TGGAAAATTCCTTGATTTGC+TGG | 0.311128 | 1.3:+8266546 | None:intergenic |
| AGGCATCTGTGCGAGTTTAC+AGG | 0.319353 | 1.3:-8266130 | MS.gene016069:CDS |
| CAAAAGAGTTACTGTAGTTT+GGG | 0.335107 | 1.3:+8264621 | None:intergenic |
| CACCGTACAGTGCTTGGTTC+AGG | 0.346864 | 1.3:-8267227 | MS.gene016069:CDS |
| CACAATACAGTTTCCTCACT+TGG | 0.354867 | 1.3:+8266936 | None:intergenic |
| CAGAAGATTCCTTTACTCAT+AGG | 0.359787 | 1.3:-8266150 | MS.gene016069:CDS |
| CACACTCCTAAGTTGATTGC+TGG | 0.375345 | 1.3:-8266316 | MS.gene016069:CDS |
| TCAACTTCGGTCCAGTCGTC+AGG | 0.376176 | 1.3:+8267361 | None:intergenic |
| TAGCAAGGCATTGTATAAAA+TGG | 0.394303 | 1.3:+8264650 | None:intergenic |
| AGGTGGCGGCGGCAACTTCT+CGG | 0.397158 | 1.3:+8267458 | None:intergenic |
| GTACCACCACACGGTGGCTT+TGG | 0.402704 | 1.3:-8264098 | MS.gene016069:CDS |
| ACAACTTGTTCGTGTGAATC+AGG | 0.411639 | 1.3:-8266607 | MS.gene016069:CDS |
| TACAGGTCTTGATGTTGAAA+TGG | 0.423398 | 1.3:-8266113 | MS.gene016069:CDS |
| CAAGAAGGAACTCGCAAAGC+TGG | 0.423555 | 1.3:-8267497 | MS.gene016069:CDS |
| CAAAGGGAAACCTGCATGCC+TGG | 0.426932 | 1.3:-8266254 | MS.gene016069:CDS |
| AGGGTGGAGCTGCTGTCTTT+AGG | 0.428133 | 1.3:-8266285 | MS.gene016069:CDS |
| GGAGTAGAGATTGAACCTTT+TGG | 0.442706 | 1.3:-8264870 | MS.gene016069:CDS |
| AACACCTTTAGGGGTTCAAA+CGG | 0.444877 | 1.3:+8265881 | None:intergenic |
| ATCTGCGGACTCACTAAATC+AGG | 0.450583 | 1.3:+8267199 | None:intergenic |
| CTTGATTTGCTGGTGTTCGC+AGG | 0.452358 | 1.3:+8266556 | None:intergenic |
| TGGAGCTGCTGTCTTTAGGC+TGG | 0.464922 | 1.3:-8266281 | MS.gene016069:CDS |
| GATTAAGAAACATTATTATG+AGG | 0.466183 | 1.3:-8266089 | MS.gene016069:intron |
| TTAGGTGAGGAGATAATATC+AGG | 0.470682 | 1.3:-8264413 | MS.gene016069:intron |
| TATTAAAGGTGCCTCACAAC+AGG | 0.473545 | 1.3:-8267101 | MS.gene016069:intron |
| GAGTCTATTGTCGATGTTGA+AGG | 0.473757 | 1.3:-8267148 | MS.gene016069:CDS |
| TTACAGTTCCAACTTGAGAC+TGG | 0.475421 | 1.3:+8266520 | None:intergenic |
| AATGCCATCTTCTTCCCAAC+TGG | 0.476125 | 1.3:+8267274 | None:intergenic |
| CTTTGCGAGTTCCTTCTTGG+AGG | 0.479823 | 1.3:+8267501 | None:intergenic |
| TGAGATTCTGAAGTTGACAT+TGG | 0.488423 | 1.3:+8267562 | None:intergenic |
| CGGTGGCTTTGGAGTAGGCT+TGG | 0.490259 | 1.3:-8264087 | MS.gene016069:CDS |
| GCAGCATCCTCGATATTAAA+CGG | 0.494569 | 1.3:+8266890 | None:intergenic |
| TGAGGCTCTCAATGATTCAC+TGG | 0.499024 | 1.3:-8267341 | MS.gene016069:CDS |
| TGGTTTCACCGTACAGTGCT+TGG | 0.499781 | 1.3:-8267233 | MS.gene016069:CDS |
| TTTGTTTCTGATGACAGTGT+CGG | 0.500363 | 1.3:+8267535 | None:intergenic |
| AAAATGGTCTTACAGCCAAC+GGG | 0.502027 | 1.3:+8264666 | None:intergenic |
| GTCTTACAGCCAACGGGTAC+CGG | 0.506627 | 1.3:+8264672 | None:intergenic |
| TCAGTATTCAAGTCACCAAA+AGG | 0.506705 | 1.3:+8264855 | None:intergenic |
| TCATTGAGCTCCCTGACGAC+TGG | 0.506929 | 1.3:-8267372 | MS.gene016069:CDS |
| CTAGATCCAGCAATCAACTT+AGG | 0.510006 | 1.3:+8266310 | None:intergenic |
| GGTGACTGAGCCAGGCATGC+AGG | 0.511713 | 1.3:+8266244 | None:intergenic |
| TTTAATAGGAGCGGCTGGAA+TGG | 0.513685 | 1.3:+8267117 | None:intergenic |
| GCACCTTTAATAGGAGCGGC+TGG | 0.516328 | 1.3:+8267112 | None:intergenic |
| CACAAGCTATTCGACCAGTT+GGG | 0.517268 | 1.3:-8267288 | MS.gene016069:CDS |
| GCACAAGCTATTCGACCAGT+TGG | 0.517849 | 1.3:-8267289 | MS.gene016069:CDS |
| TTCCACATCCAGTCTCAAGT+TGG | 0.521976 | 1.3:-8266528 | MS.gene016069:CDS |
| ACACCTTTAGGGGTTCAAAC+GGG | 0.524064 | 1.3:+8265882 | None:intergenic |
| CAGCCAACGGGTACCGGTGA+AGG | 0.524085 | 1.3:+8264678 | None:intergenic |
| CTGCGGCTTACATATGAAGA+AGG | 0.526092 | 1.3:-8265678 | MS.gene016069:CDS |
| AATGAATATATATACCTGAA+TGG | 0.529761 | 1.3:+8266841 | None:intergenic |
| GAAACTGTATTGTGTGAGTA+AGG | 0.532678 | 1.3:-8266927 | MS.gene016069:CDS |
| AAACAAATTAACACCTTTAG+GGG | 0.533347 | 1.3:+8265872 | None:intergenic |
| GAATAGCTTGTGCCCTCCCA+CGG | 0.535699 | 1.3:+8267299 | None:intergenic |
| CTGCGAACACCAGCAAATCA+AGG | 0.537117 | 1.3:-8266555 | MS.gene016069:CDS |
| GAAGTTGAGGTGACTGAGCC+AGG | 0.538658 | 1.3:+8266236 | None:intergenic |
| TCTTTAGGCTGGACTACAAA+GGG | 0.538957 | 1.3:-8266270 | MS.gene016069:CDS |
| AGAAAGGAAACTAGGCCAGC+TGG | 0.539715 | 1.3:-8264829 | MS.gene016069:CDS |
| TACTCTGCCGTTTAATATCG+AGG | 0.540763 | 1.3:-8266897 | MS.gene016069:CDS |
| AACAAGCAGGTTCTAATCCG+TGG | 0.542895 | 1.3:-8267316 | MS.gene016069:CDS |
| CGATGTAGCAGAGGTGGCGG+CGG | 0.543849 | 1.3:+8267447 | None:intergenic |
| TCGATATTAAACGGCAGAGT+AGG | 0.544830 | 1.3:+8266899 | None:intergenic |
| CGGCGGCAACTTCTCGGCGG+CGG | 0.544898 | 1.3:+8267464 | None:intergenic |
| CCACACGGTGGCTTTGGAGT+AGG | 0.547341 | 1.3:-8264092 | MS.gene016069:CDS |
| TTTGAACACAAAATGTAAGA+AGG | 0.547679 | 1.3:-8265930 | MS.gene016069:CDS |
| TAAAATGGTCTTACAGCCAA+CGG | 0.552316 | 1.3:+8264665 | None:intergenic |
| CGTCAGGGAGCTCAATGAGC+GGG | 0.553502 | 1.3:+8267377 | None:intergenic |
| GACATTTGCTTGTGAAGTTG+AGG | 0.558674 | 1.3:+8266223 | None:intergenic |
| GCACAGATGCCTATGAGTAA+AGG | 0.560403 | 1.3:+8266141 | None:intergenic |
| TTCCAACTTGAGACTGGATG+TGG | 0.562506 | 1.3:+8266526 | None:intergenic |
| AGTCGATGTAGCAGAGGTGG+CGG | 0.572655 | 1.3:+8267444 | None:intergenic |
| CAGAGTTCTATATCCTTCAC+CGG | 0.573477 | 1.3:-8264691 | MS.gene016069:CDS |
| ATTAAACGGCAGAGTAGGAA+TGG | 0.575600 | 1.3:+8266904 | None:intergenic |
| TAGTTTGGGTTGTCATAGCA+AGG | 0.575643 | 1.3:+8264635 | None:intergenic |
| GAAGAACGTGCACAAGCTTG+CGG | 0.577219 | 1.3:-8264359 | MS.gene016069:CDS |
| TCGACCAGTTGGGAAGAAGA+TGG | 0.581394 | 1.3:-8267278 | MS.gene016069:CDS |
| AGACTCACGGCTGAGAGCGG+CGG | 0.581736 | 1.3:+8267165 | None:intergenic |
| TGCACAAGCTTGCGGCATTG+AGG | 0.583418 | 1.3:-8264351 | MS.gene016069:CDS |
| ACTGAAGCAGAAAGGAAACT+AGG | 0.584857 | 1.3:-8264837 | MS.gene016069:CDS |
| GAGAGTCGATGTAGCAGAGG+TGG | 0.585897 | 1.3:+8267441 | None:intergenic |
| TGATTCACTGGAGAACAAGC+AGG | 0.586415 | 1.3:-8267329 | MS.gene016069:CDS |
| GTCTTTAGGCTGGACTACAA+AGG | 0.586503 | 1.3:-8266271 | MS.gene016069:CDS |
| AAACCATAATTGACAGCAAG+GGG | 0.592667 | 1.3:+8267403 | None:intergenic |
| ACTTGAATACTGAAGCAGAA+AGG | 0.595013 | 1.3:-8264845 | MS.gene016069:CDS |
| TGACGACTGGACCGAAGTTG+AGG | 0.595296 | 1.3:-8267359 | MS.gene016069:CDS |
| TGATTTAGTGAGTCCGCAGA+TGG | 0.596877 | 1.3:-8267197 | MS.gene016069:CDS |
| GTACCCGTTTGAACCCCTAA+AGG | 0.597654 | 1.3:-8265885 | MS.gene016069:intron |
| CAACTTCGGTCCAGTCGTCA+GGG | 0.601964 | 1.3:+8267362 | None:intergenic |
| AGAGAGAGTCGATGTAGCAG+AGG | 0.603238 | 1.3:+8267438 | None:intergenic |
| ATCATTGAGAGCCTCAACTT+CGG | 0.607801 | 1.3:+8267348 | None:intergenic |
| ATCAAAACCAACCTGTTGTG+AGG | 0.608593 | 1.3:+8267090 | None:intergenic |
| TGAGGCACCTTTAATAGGAG+CGG | 0.608618 | 1.3:+8267108 | None:intergenic |
| TATCCTTCACCGGTACCCGT+TGG | 0.609544 | 1.3:-8264681 | MS.gene016069:CDS |
| CAGCAATCAACTTAGGAGTG+TGG | 0.611888 | 1.3:+8266317 | None:intergenic |
| GCGGCAAATTTCACCATCTG+CGG | 0.614321 | 1.3:+8267184 | None:intergenic |
| ATTGCTGGATCTAGTGAGGG+TGG | 0.614640 | 1.3:-8266301 | MS.gene016069:CDS |
| ACAAGCAGGTTCTAATCCGT+GGG | 0.615661 | 1.3:-8267315 | MS.gene016069:CDS |
| TATTGTCGATGTTGAAGGTG+TGG | 0.616511 | 1.3:-8267143 | MS.gene016069:CDS |
| AGCAGGTTCTAATCCGTGGG+AGG | 0.619320 | 1.3:-8267312 | MS.gene016069:CDS |
| ATCATGGTGCAATCCTGAGT+GGG | 0.620490 | 1.3:+8264000 | None:intergenic |
| AATAGACTCACGGCTGAGAG+CGG | 0.623488 | 1.3:+8267162 | None:intergenic |
| AAGTGAAGTTGAAATTGAGA+AGG | 0.624126 | 1.3:-8266864 | MS.gene016069:CDS |
| TAAGAAGGATCTCGAAGCTG+TGG | 0.629352 | 1.3:-8265915 | MS.gene016069:CDS |
| GTTGATTGCTGGATCTAGTG+AGG | 0.632210 | 1.3:-8266305 | MS.gene016069:CDS |
| CAACATCGACAATAGACTCA+CGG | 0.632667 | 1.3:+8267152 | None:intergenic |
| CGTGTAGTAATGCTCTTCTG+TGG | 0.635161 | 1.3:-8264062 | MS.gene016069:CDS |
| TGCCTGAACCAAGCACTGTA+CGG | 0.635520 | 1.3:+8267225 | None:intergenic |
| GCAGGTTCTAATCCGTGGGA+GGG | 0.639094 | 1.3:-8267311 | MS.gene016069:CDS |
| AGAAGGTATTCAGATGCTCA+AGG | 0.641602 | 1.3:-8265661 | MS.gene016069:intron |
| TTGATTGCTGGATCTAGTGA+GGG | 0.644845 | 1.3:-8266304 | MS.gene016069:CDS |
| ACTCCAAAGCCACCGTGTGG+TGG | 0.646949 | 1.3:+8264095 | None:intergenic |
| CATCATGGTGCAATCCTGAG+TGG | 0.650761 | 1.3:+8263999 | None:intergenic |
| TCGTCAGGGAGCTCAATGAG+CGG | 0.662590 | 1.3:+8267376 | None:intergenic |
| AGATATGGTGTACCACCACA+CGG | 0.671410 | 1.3:-8264107 | MS.gene016069:CDS |
| AAAACCATAATTGACAGCAA+GGG | 0.671638 | 1.3:+8267402 | None:intergenic |
| TATAGGTTGAAATCCAAGTG+AGG | 0.674003 | 1.3:-8266949 | MS.gene016069:intron |
| GCAATCCTGAGTGGGTCACG+TGG | 0.678111 | 1.3:+8264008 | None:intergenic |
| TGGCGGCGGCAACTTCTCGG+CGG | 0.684255 | 1.3:+8267461 | None:intergenic |
| CCTACTCCAAAGCCACCGTG+TGG | 0.729566 | 1.3:+8264092 | None:intergenic |
| AACCATAATTGACAGCAAGG+GGG | 0.738850 | 1.3:+8267404 | None:intergenic |
| AGTATCTTCCAAATACTCTG+CGG | 0.740430 | 1.3:-8265695 | MS.gene016069:CDS |
| TATGGTGTACCACCACACGG+TGG | 0.820152 | 1.3:-8264104 | MS.gene016069:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATAATATTAGAGAAAAT+AGG | + | chr1.3:8265068-8265087 | None:intergenic | 15.0% |
| !! | ATTATATAAATGTCATTGAA+AGG | - | chr1.3:8266183-8266202 | MS.gene016069:CDS | 15.0% |
| !! | TAACTATGATATATATAAGA+TGG | - | chr1.3:8266595-8266614 | MS.gene016069:CDS | 15.0% |
| !! | TTTCAATTTAATTCAAGAAA+AGG | - | chr1.3:8266406-8266425 | MS.gene016069:intron | 15.0% |
| !! | TTTCTTGAATTAAATTGAAA+AGG | + | chr1.3:8266406-8266425 | None:intergenic | 15.0% |
| !!! | ATAATTTTAAACTTTACTAC+AGG | + | chr1.3:8266138-8266157 | None:intergenic | 15.0% |
| !!! | GATTTTGATTTTGATTATAA+TGG | - | chr1.3:8264568-8264587 | MS.gene016069:intron | 15.0% |
| !! | AAATTGATGAAAATGTACTT+GGG | - | chr1.3:8266225-8266244 | MS.gene016069:CDS | 20.0% |
| !! | AACCAAATAATTGTTACTAT+TGG | - | chr1.3:8266376-8266395 | MS.gene016069:intron | 20.0% |
| !! | AATAGTAACAATTATTTGGT+TGG | + | chr1.3:8266377-8266396 | None:intergenic | 20.0% |
| !! | AATGAATATATATACCTGAA+TGG | + | chr1.3:8264722-8264741 | None:intergenic | 20.0% |
| !! | ACCAAATAATTGTTACTATT+GGG | - | chr1.3:8266377-8266396 | MS.gene016069:intron | 20.0% |
| !! | GATTAAGAAACATTATTATG+AGG | - | chr1.3:8265471-8265490 | MS.gene016069:intron | 20.0% |
| !! | TAAATTGATGAAAATGTACT+TGG | - | chr1.3:8266224-8266243 | MS.gene016069:CDS | 20.0% |
| !! | TCAATTACAACATTTCTAAT+CGG | + | chr1.3:8264746-8264765 | None:intergenic | 20.0% |
| !! | TGTAATTCTATTTATAGGTA+TGG | - | chr1.3:8266844-8266863 | MS.gene016069:intron | 20.0% |
| !!! | CAATTTATTTGTTTTGTAGT+GGG | - | chr1.3:8265750-8265769 | MS.gene016069:intron | 20.0% |
| !!! | CATTTCTTAAGTTAGTTTAT+CGG | + | chr1.3:8265152-8265171 | None:intergenic | 20.0% |
| !!! | TCAATTTATTTGTTTTGTAG+TGG | - | chr1.3:8265749-8265768 | MS.gene016069:intron | 20.0% |
| !!! | TCAATTTTACAAAATAGACA+GGG | + | chr1.3:8266026-8266045 | None:intergenic | 20.0% |
| !!! | TCTATTTTGTAAAATTGAGA+GGG | - | chr1.3:8266028-8266047 | MS.gene016069:intron | 20.0% |
| !!! | TCTGGTTATAATGATTTTAT+GGG | - | chr1.3:8267387-8267406 | MS.gene016069:CDS | 20.0% |
| !!! | TGTTGTTTTGTTTAATATAC+CGG | - | chr1.3:8264872-8264891 | MS.gene016069:CDS | 20.0% |
| ! | AAACAAATTAACACCTTTAG+GGG | + | chr1.3:8265691-8265710 | None:intergenic | 25.0% |
| ! | ACATTATTATGAGGTACATT+TGG | - | chr1.3:8265480-8265499 | MS.gene016069:intron | 25.0% |
| ! | AGGACATATAGTTATTTGAT+TGG | - | chr1.3:8266426-8266445 | MS.gene016069:intron | 25.0% |
| ! | ATCAGAAACAAAAAGCAAAA+AGG | - | chr1.3:8264036-8264055 | MS.gene016069:CDS | 25.0% |
| ! | CAAACAAATTAACACCTTTA+GGG | + | chr1.3:8265692-8265711 | None:intergenic | 25.0% |
| ! | CCAAATAATTGTTACTATTG+GGG | - | chr1.3:8266378-8266397 | MS.gene016069:intron | 25.0% |
| ! | GATAAACAAACAAATGTGAT+AGG | - | chr1.3:8265963-8265982 | MS.gene016069:CDS | 25.0% |
| ! | GTTCAATGTCTTTGTTAATA+CGG | - | chr1.3:8267337-8267356 | MS.gene016069:CDS | 25.0% |
| ! | TATAAGATTAAACTGTACAC+AGG | + | chr1.3:8266083-8266102 | None:intergenic | 25.0% |
| ! | TCGACTGTAATTCTATTTAT+AGG | - | chr1.3:8266839-8266858 | MS.gene016069:intron | 25.0% |
| ! | TGATTGATCATTTACAGATA+TGG | - | chr1.3:8267438-8267457 | MS.gene016069:CDS | 25.0% |
| ! | TTCAATGTCTTTGTTAATAC+GGG | - | chr1.3:8267338-8267357 | MS.gene016069:CDS | 25.0% |
| ! | TTTAAACTTTACTACAGGAT+TGG | + | chr1.3:8266133-8266152 | None:intergenic | 25.0% |
| ! | TTTAGTCATTTCATTGATGA+TGG | - | chr1.3:8266304-8266323 | MS.gene016069:CDS | 25.0% |
| ! | TTTGAACACAAAATGTAAGA+AGG | - | chr1.3:8265630-8265649 | MS.gene016069:intron | 25.0% |
| !! | AACTTAAGAAATGCATTTTG+CGG | - | chr1.3:8265159-8265178 | MS.gene016069:intron | 25.0% |
| !! | AGTTATAAAAGATTTGAGAC+AGG | + | chr1.3:8266774-8266793 | None:intergenic | 25.0% |
| !! | CTAAATGAGATCTCATTTTA+TGG | + | chr1.3:8266289-8266308 | None:intergenic | 25.0% |
| !! | CTATTTTGTAAAATTGAGAG+GGG | - | chr1.3:8266029-8266048 | MS.gene016069:intron | 25.0% |
| !! | CTCAATTTTACAAAATAGAC+AGG | + | chr1.3:8266027-8266046 | None:intergenic | 25.0% |
| !! | CTCTGGTTATAATGATTTTA+TGG | - | chr1.3:8267386-8267405 | MS.gene016069:CDS | 25.0% |
| !! | CTGGTTATAATGATTTTATG+GGG | - | chr1.3:8267388-8267407 | MS.gene016069:CDS | 25.0% |
| !! | GTCTATTTTGTAAAATTGAG+AGG | - | chr1.3:8266027-8266046 | MS.gene016069:intron | 25.0% |
| !! | GTTATAAAAGATTTGAGACA+GGG | + | chr1.3:8266773-8266792 | None:intergenic | 25.0% |
| !! | TATGGAAGTACAAACAAATT+TGG | + | chr1.3:8267072-8267091 | None:intergenic | 25.0% |
| !! | TGGAATTTTCAAAAATTGGA+GGG | + | chr1.3:8266357-8266376 | None:intergenic | 25.0% |
| !! | TGGTTGGAATTTTCAAAAAT+TGG | + | chr1.3:8266361-8266380 | None:intergenic | 25.0% |
| !! | TTGGAATTTTCAAAAATTGG+AGG | + | chr1.3:8266358-8266377 | None:intergenic | 25.0% |
| !!! | ACTGATACTTTTCTGTTTTT+TGG | - | chr1.3:8265560-8265579 | MS.gene016069:intron | 25.0% |
| !!! | CTAAAGGTGTTAATTTGTTT+GGG | - | chr1.3:8265691-8265710 | MS.gene016069:CDS | 25.0% |
| !!! | TGATCAATCATTTAGTTTTC+TGG | + | chr1.3:8267428-8267447 | None:intergenic | 25.0% |
| !!! | TTGATTATAATGGTGTTATG+TGG | - | chr1.3:8264578-8264597 | MS.gene016069:intron | 25.0% |
| AAAAACCATAATTGACAGCA+AGG | + | chr1.3:8264162-8264181 | None:intergenic | 30.0% | |
| AAAACCATAATTGACAGCAA+GGG | + | chr1.3:8264161-8264180 | None:intergenic | 30.0% | |
| AAGAATCAATGTAAGCAGAT+AGG | + | chr1.3:8267242-8267261 | None:intergenic | 30.0% | |
| AAGTGAAGTTGAAATTGAGA+AGG | - | chr1.3:8264696-8264715 | MS.gene016069:CDS | 30.0% | |
| AATCACAAAACCTAAGTAAC+AGG | + | chr1.3:8264498-8264517 | None:intergenic | 30.0% | |
| AATGCTTTGGTATGACAATT+TGG | - | chr1.3:8267009-8267028 | MS.gene016069:intron | 30.0% | |
| ACACACATCTTTAATCAGAA+AGG | + | chr1.3:8264848-8264867 | None:intergenic | 30.0% | |
| CAAAAGAGTTACTGTAGTTT+GGG | + | chr1.3:8266942-8266961 | None:intergenic | 30.0% | |
| CAAGTTAGTGACACTTATTT+AGG | - | chr1.3:8266453-8266472 | MS.gene016069:intron | 30.0% | |
| CACAAGCAAATGTCAATATT+TGG | - | chr1.3:8265346-8265365 | MS.gene016069:intron | 30.0% | |
| CCAAACAAATTAACACCTTT+AGG | + | chr1.3:8265693-8265712 | None:intergenic | 30.0% | |
| CCCCAATAGTAACAATTATT+TGG | + | chr1.3:8266381-8266400 | None:intergenic | 30.0% | |
| TCAAAAGAGTTACTGTAGTT+TGG | + | chr1.3:8266943-8266962 | None:intergenic | 30.0% | |
| TTCTTAGTCATCAGAGAAAA+TGG | - | chr1.3:8264307-8264326 | MS.gene016069:intron | 30.0% | |
| TTTACATCAAGACTCAGAAA+AGG | - | chr1.3:8266559-8266578 | MS.gene016069:CDS | 30.0% | |
| TTTGTGAGTTGTGATTGTTT+AGG | - | chr1.3:8264540-8264559 | MS.gene016069:intron | 30.0% | |
| ! | TATTTTGTCATGCAATGCTT+TGG | - | chr1.3:8266996-8267015 | MS.gene016069:intron | 30.0% |
| ! | TCTTAAGTTAGTTTATCGGT+AGG | + | chr1.3:8265148-8265167 | None:intergenic | 30.0% |
| !! | CCTAAAGGTGTTAATTTGTT+TGG | - | chr1.3:8265690-8265709 | MS.gene016069:CDS | 30.0% |
| !! | GTTTTGATATCCTGTTACTT+AGG | - | chr1.3:8264485-8264504 | MS.gene016069:intron | 30.0% |
| !! | TAGCAAGGCATTGTATAAAA+TGG | + | chr1.3:8266913-8266932 | None:intergenic | 30.0% |
| !! | TTCATTGATGATGGTAGTTT+GGG | - | chr1.3:8266313-8266332 | MS.gene016069:CDS | 30.0% |
| !! | TTTCATTGATGATGGTAGTT+TGG | - | chr1.3:8266312-8266331 | MS.gene016069:CDS | 30.0% |
| !! | TTTCCTCTTGTAGTTAGTTT+TGG | - | chr1.3:8266510-8266529 | MS.gene016069:intron | 30.0% |
| !!! | ATACTTTTCTGTTTTTTGGC+AGG | - | chr1.3:8265564-8265583 | MS.gene016069:intron | 30.0% |
| !!! | ATTACTTTTCTAAAACCAGC+TGG | + | chr1.3:8266749-8266768 | None:intergenic | 30.0% |
| !!! | GTTGATGGTGATTTTTTAAC+TGG | - | chr1.3:8264917-8264936 | MS.gene016069:intron | 30.0% |
| !!! | TATGTGGTTTTGTTCTCTAT+AGG | - | chr1.3:8264594-8264613 | MS.gene016069:intron | 30.0% |
| !!! | TTCCTCTTGTAGTTAGTTTT+GGG | - | chr1.3:8266511-8266530 | MS.gene016069:intron | 30.0% |
| AAACCATAATTGACAGCAAG+GGG | + | chr1.3:8264160-8264179 | None:intergenic | 35.0% | |
| AACTATTGTTGAGGAATTCC+TGG | - | chr1.3:8266481-8266500 | MS.gene016069:intron | 35.0% | |
| ACAAAGACATTGAACACGAT+AGG | + | chr1.3:8267332-8267351 | None:intergenic | 35.0% | |
| ACTATTGTTGAGGAATTCCT+GGG | - | chr1.3:8266482-8266501 | MS.gene016069:intron | 35.0% | |
| ACTTGAATACTGAAGCAGAA+AGG | - | chr1.3:8266715-8266734 | MS.gene016069:intron | 35.0% | |
| AGTATCTTCCAAATACTCTG+CGG | - | chr1.3:8265865-8265884 | MS.gene016069:intron | 35.0% | |
| CAAATGTGATAGGATGATGA+TGG | - | chr1.3:8265973-8265992 | MS.gene016069:CDS | 35.0% | |
| CACCATCAACATTCATGTAA+GGG | + | chr1.3:8264907-8264926 | None:intergenic | 35.0% | |
| CAGAAGATTCCTTTACTCAT+AGG | - | chr1.3:8265410-8265429 | MS.gene016069:intron | 35.0% | |
| CTTTGTTAATACGGGTGTTT+AGG | - | chr1.3:8267346-8267365 | MS.gene016069:CDS | 35.0% | |
| GAAACTGTATTGTGTGAGTA+AGG | - | chr1.3:8264633-8264652 | MS.gene016069:CDS | 35.0% | |
| GAAGATACTGCACATTCATA+GGG | + | chr1.3:8265854-8265873 | None:intergenic | 35.0% | |
| GGAATTCCTCAACAATAGTT+AGG | + | chr1.3:8266481-8266500 | None:intergenic | 35.0% | |
| TACAGGTCTTGATGTTGAAA+TGG | - | chr1.3:8265447-8265466 | MS.gene016069:intron | 35.0% | |
| TAGGTTCCTAACTATTGTTG+AGG | - | chr1.3:8266472-8266491 | MS.gene016069:intron | 35.0% | |
| TCACCATCAACATTCATGTA+AGG | + | chr1.3:8264908-8264927 | None:intergenic | 35.0% | |
| TCAGTATTCAAGTCACCAAA+AGG | + | chr1.3:8266708-8266727 | None:intergenic | 35.0% | |
| TTAGGTGAGGAGATAATATC+AGG | - | chr1.3:8267147-8267166 | MS.gene016069:CDS | 35.0% | |
| ! | CCATAAAAGCTGAAGCTTTT+GGG | - | chr1.3:8267087-8267106 | MS.gene016069:intron | 35.0% |
| ! | GAGTAATGATTTTGCTTTGC+AGG | - | chr1.3:8266662-8266681 | MS.gene016069:intron | 35.0% |
| ! | GCACGCAATTAATCATGTTT+TGG | - | chr1.3:8267033-8267052 | MS.gene016069:intron | 35.0% |
| ! | TAAAATGGTCTTACAGCCAA+CGG | + | chr1.3:8266898-8266917 | None:intergenic | 35.0% |
| ! | TATAGGTTGAAATCCAAGTG+AGG | - | chr1.3:8264611-8264630 | MS.gene016069:CDS | 35.0% |
| ! | TATCCACATGCCTGAATTTT+TGG | - | chr1.3:8267179-8267198 | MS.gene016069:CDS | 35.0% |
| ! | TCCATAAAAGCTGAAGCTTT+TGG | - | chr1.3:8267086-8267105 | MS.gene016069:intron | 35.0% |
| ! | TCTTTTGATGTCTTCATTCG+AGG | - | chr1.3:8266955-8266974 | MS.gene016069:intron | 35.0% |
| ! | TTTGCGTTTGAAATTGTCGA+GGG | - | chr1.3:8265523-8265542 | MS.gene016069:intron | 35.0% |
| ! | TTTTGTAAAATTGAGAGGGG+TGG | - | chr1.3:8266032-8266051 | MS.gene016069:intron | 35.0% |
| !! | CTGCTTACATTGATTCTTTC+AGG | - | chr1.3:8267244-8267263 | MS.gene016069:CDS | 35.0% |
| !! | TCATTGATGATGGTAGTTTG+GGG | - | chr1.3:8266314-8266333 | MS.gene016069:CDS | 35.0% |
| !! | TGGAAAATTCCTTGATTTGC+TGG | + | chr1.3:8265017-8265036 | None:intergenic | 35.0% |
| !! | TTTGTTTCTGATGACAGTGT+CGG | + | chr1.3:8264028-8264047 | None:intergenic | 35.0% |
| !!! | TGTAGTTAGTTTTGGGAGTT+TGG | - | chr1.3:8266518-8266537 | MS.gene016069:intron | 35.0% |
| !!! | TTCTGTTTTTTGGCAGGTTA+TGG | - | chr1.3:8265570-8265589 | MS.gene016069:intron | 35.0% |
| AACCATAATTGACAGCAAGG+GGG | + | chr1.3:8264159-8264178 | None:intergenic | 40.0% | |
| ACTGAAGCAGAAAGGAAACT+AGG | - | chr1.3:8266723-8266742 | MS.gene016069:intron | 40.0% | |
| ATCAAAACCAACCTGTTGTG+AGG | + | chr1.3:8264473-8264492 | None:intergenic | 40.0% | |
| ATCATTGAGAGCCTCAACTT+CGG | + | chr1.3:8264215-8264234 | None:intergenic | 40.0% | |
| ATTAAACGGCAGAGTAGGAA+TGG | + | chr1.3:8264659-8264678 | None:intergenic | 40.0% | |
| CAACATCGACAATAGACTCA+CGG | + | chr1.3:8264411-8264430 | None:intergenic | 40.0% | |
| CACAATACAGTTTCCTCACT+TGG | + | chr1.3:8264627-8264646 | None:intergenic | 40.0% | |
| CAGAGTTCTATATCCTTCAC+CGG | - | chr1.3:8266869-8266888 | MS.gene016069:CDS | 40.0% | |
| CAGCACCAATCTCAAAAACA+CGG | + | chr1.3:8265381-8265400 | None:intergenic | 40.0% | |
| CTACAATCAAGATGAGAGTG+TGG | - | chr1.3:8264780-8264799 | MS.gene016069:intron | 40.0% | |
| CTAGATCCAGCAATCAACTT+AGG | + | chr1.3:8265253-8265272 | None:intergenic | 40.0% | |
| CTATTGTTGAGGAATTCCTG+GGG | - | chr1.3:8266483-8266502 | MS.gene016069:intron | 40.0% | |
| CTCCCAAAACTAACTACAAG+AGG | + | chr1.3:8266516-8266535 | None:intergenic | 40.0% | |
| CTCCCTTACATGAATGTTGA+TGG | - | chr1.3:8264902-8264921 | MS.gene016069:intron | 40.0% | |
| CTTCCAAAAATTCAGGCATG+TGG | + | chr1.3:8267185-8267204 | None:intergenic | 40.0% | |
| GAAAATGTACTTGGGTAGAC+AGG | - | chr1.3:8266233-8266252 | MS.gene016069:CDS | 40.0% | |
| GACAGGGATAAAAGACGTAA+AGG | + | chr1.3:8266010-8266029 | None:intergenic | 40.0% | |
| GACATTTGCTTGTGAAGTTG+AGG | + | chr1.3:8265340-8265359 | None:intergenic | 40.0% | |
| GAGTCTATTGTCGATGTTGA+AGG | - | chr1.3:8264412-8264431 | MS.gene016069:CDS | 40.0% | |
| GCACGTTCTTCCAAAAATTC+AGG | + | chr1.3:8267192-8267211 | None:intergenic | 40.0% | |
| GCAGCATCCTCGATATTAAA+CGG | + | chr1.3:8264673-8264692 | None:intergenic | 40.0% | |
| GGAAGATACTGCACATTCAT+AGG | + | chr1.3:8265855-8265874 | None:intergenic | 40.0% | |
| TACAAGAGGAAAAATACCCC+AGG | + | chr1.3:8266502-8266521 | None:intergenic | 40.0% | |
| TATTGTCGATGTTGAAGGTG+TGG | - | chr1.3:8264417-8264436 | MS.gene016069:intron | 40.0% | |
| TCGATATTAAACGGCAGAGT+AGG | + | chr1.3:8264664-8264683 | None:intergenic | 40.0% | |
| TCTTTAGGCTGGACTACAAA+GGG | - | chr1.3:8265290-8265309 | MS.gene016069:intron | 40.0% | |
| TGAAATTGAGAAGGCCATTC+AGG | - | chr1.3:8264705-8264724 | MS.gene016069:intron | 40.0% | |
| TTACAGTTCCAACTTGAGAC+TGG | + | chr1.3:8265043-8265062 | None:intergenic | 40.0% | |
| TTGATTGCTGGATCTAGTGA+GGG | - | chr1.3:8265256-8265275 | MS.gene016069:intron | 40.0% | |
| ! | AAAATGGTCTTACAGCCAAC+GGG | + | chr1.3:8266897-8266916 | None:intergenic | 40.0% |
| ! | AACACCTTTAGGGGTTCAAA+CGG | + | chr1.3:8265682-8265701 | None:intergenic | 40.0% |
| ! | ACAACTTGTTCGTGTGAATC+AGG | - | chr1.3:8264953-8264972 | MS.gene016069:intron | 40.0% |
| ! | ATGCATTTTGCGGTGTGATA+CGG | - | chr1.3:8265169-8265188 | MS.gene016069:intron | 40.0% |
| ! | CCCAAAAGCTTCAGCTTTTA+TGG | + | chr1.3:8267090-8267109 | None:intergenic | 40.0% |
| ! | CTATGCAATCCTTGTTGCTT+AGG | - | chr1.3:8267129-8267148 | MS.gene016069:CDS | 40.0% |
| ! | GATTTTGCTTTGCAGGAAGT+TGG | - | chr1.3:8266669-8266688 | MS.gene016069:intron | 40.0% |
| ! | GGAGTAGAGATTGAACCTTT+TGG | - | chr1.3:8266690-8266709 | MS.gene016069:intron | 40.0% |
| ! | GTTGCTGCTTGTAAGTTTGT+TGG | - | chr1.3:8265114-8265133 | MS.gene016069:intron | 40.0% |
| ! | GTTTGCGTTTGAAATTGTCG+AGG | - | chr1.3:8265522-8265541 | MS.gene016069:intron | 40.0% |
| ! | TACTCTGCCGTTTAATATCG+AGG | - | chr1.3:8264663-8264682 | MS.gene016069:CDS | 40.0% |
| ! | TATGTAAGCCGCAGAGTATT+TGG | + | chr1.3:8265876-8265895 | None:intergenic | 40.0% |
| ! | TGTTGTGAGGCACCTTTAAT+AGG | + | chr1.3:8264460-8264479 | None:intergenic | 40.0% |
| !! | AGAAGGTATTCAGATGCTCA+AGG | - | chr1.3:8265899-8265918 | MS.gene016069:CDS | 40.0% |
| !! | ATGTGATAGGATGATGATGG+CGG | - | chr1.3:8265976-8265995 | MS.gene016069:CDS | 40.0% |
| !! | TAGTTTGGGTTGTCATAGCA+AGG | + | chr1.3:8266928-8266947 | None:intergenic | 40.0% |
| !! | TATTAAAGGTGCCTCACAAC+AGG | - | chr1.3:8264459-8264478 | MS.gene016069:intron | 40.0% |
| !! | TGGAAGTTTAAGCACTGGTA+GGG | - | chr1.3:8266052-8266071 | MS.gene016069:intron | 40.0% |
| !!! | ATTTTTTAACTGGTGCAGGC+TGG | - | chr1.3:8264927-8264946 | MS.gene016069:intron | 40.0% |
| !!! | GGTGATTTTTTAACTGGTGC+AGG | - | chr1.3:8264923-8264942 | MS.gene016069:intron | 40.0% |
| AAGCAAAAAGGCCTCCAAGA+AGG | - | chr1.3:8264048-8264067 | MS.gene016069:CDS | 45.0% | |
| AATGCCATCTTCTTCCCAAC+TGG | + | chr1.3:8264289-8264308 | None:intergenic | 45.0% | |
| AGATATGGTGTACCACCACA+CGG | - | chr1.3:8267453-8267472 | MS.gene016069:CDS | 45.0% | |
| ATAACCAGAGCTCAGCAAGA+GGG | + | chr1.3:8267376-8267395 | None:intergenic | 45.0% | |
| ATCTCCTCACCTAAGCAACA+AGG | + | chr1.3:8267141-8267160 | None:intergenic | 45.0% | |
| ATCTGCGGACTCACTAAATC+AGG | + | chr1.3:8264364-8264383 | None:intergenic | 45.0% | |
| ATTCCAGCCGCTCCTATTAA+AGG | - | chr1.3:8264445-8264464 | MS.gene016069:intron | 45.0% | |
| CACAAGCTATTCGACCAGTT+GGG | - | chr1.3:8264272-8264291 | MS.gene016069:intron | 45.0% | |
| CAGCAATCAACTTAGGAGTG+TGG | + | chr1.3:8265246-8265265 | None:intergenic | 45.0% | |
| CATGTAAGGGAGACAAGTTC+CGG | + | chr1.3:8264894-8264913 | None:intergenic | 45.0% | |
| CGTGTAGTAATGCTCTTCTG+TGG | - | chr1.3:8267498-8267517 | MS.gene016069:CDS | 45.0% | |
| CTGCGGCTTACATATGAAGA+AGG | - | chr1.3:8265882-8265901 | MS.gene016069:intron | 45.0% | |
| GCACAGATGCCTATGAGTAA+AGG | + | chr1.3:8265422-8265441 | None:intergenic | 45.0% | |
| GTCTTTAGGCTGGACTACAA+AGG | - | chr1.3:8265289-8265308 | MS.gene016069:intron | 45.0% | |
| GTTGATTGCTGGATCTAGTG+AGG | - | chr1.3:8265255-8265274 | MS.gene016069:intron | 45.0% | |
| TAAGAAGGATCTCGAAGCTG+TGG | - | chr1.3:8265645-8265664 | MS.gene016069:intron | 45.0% | |
| TATAACCAGAGCTCAGCAAG+AGG | + | chr1.3:8267377-8267396 | None:intergenic | 45.0% | |
| TCATTACTCGCTGCAAGACA+AGG | + | chr1.3:8266651-8266670 | None:intergenic | 45.0% | |
| TGAGGCTCTCAATGATTCAC+TGG | - | chr1.3:8264219-8264238 | MS.gene016069:intron | 45.0% | |
| TGATTCACTGGAGAACAAGC+AGG | - | chr1.3:8264231-8264250 | MS.gene016069:intron | 45.0% | |
| TGATTTAGTGAGTCCGCAGA+TGG | - | chr1.3:8264363-8264382 | MS.gene016069:CDS | 45.0% | |
| TTCCAACTTGAGACTGGATG+TGG | + | chr1.3:8265037-8265056 | None:intergenic | 45.0% | |
| TTCCACATCCAGTCTCAAGT+TGG | - | chr1.3:8265032-8265051 | MS.gene016069:intron | 45.0% | |
| TTTAATAGGAGCGGCTGGAA+TGG | + | chr1.3:8264446-8264465 | None:intergenic | 45.0% | |
| ! | AACAAGCAGGTTCTAATCCG+TGG | - | chr1.3:8264244-8264263 | MS.gene016069:intron | 45.0% |
| ! | ACAAGCAGGTTCTAATCCGT+GGG | - | chr1.3:8264245-8264264 | MS.gene016069:intron | 45.0% |
| ! | ACACCTTTAGGGGTTCAAAC+GGG | + | chr1.3:8265681-8265700 | None:intergenic | 45.0% |
| ! | CAATCCTTGTTGCTTAGGTG+AGG | - | chr1.3:8267134-8267153 | MS.gene016069:CDS | 45.0% |
| ! | TGAGGCACCTTTAATAGGAG+CGG | + | chr1.3:8264455-8264474 | None:intergenic | 45.0% |
| !! | CACACTCCTAAGTTGATTGC+TGG | - | chr1.3:8265244-8265263 | MS.gene016069:intron | 45.0% |
| !! | GTGGAAGTTTAAGCACTGGT+AGG | - | chr1.3:8266051-8266070 | MS.gene016069:intron | 45.0% |
| !!! | CTTCGCCGTGTTTTTGAGAT+TGG | - | chr1.3:8265373-8265392 | MS.gene016069:intron | 45.0% |
| AATAGACTCACGGCTGAGAG+CGG | + | chr1.3:8264401-8264420 | None:intergenic | 50.0% | |
| AGAAAGGAAACTAGGCCAGC+TGG | - | chr1.3:8266731-8266750 | MS.gene016069:intron | 50.0% | |
| AGAGAGAGTCGATGTAGCAG+AGG | + | chr1.3:8264125-8264144 | None:intergenic | 50.0% | |
| AGGCATCTGTGCGAGTTTAC+AGG | - | chr1.3:8265430-8265449 | MS.gene016069:intron | 50.0% | |
| AGGGGTGGAAGTTTAAGCAC+TGG | - | chr1.3:8266047-8266066 | MS.gene016069:intron | 50.0% | |
| ATTGCTGGATCTAGTGAGGG+TGG | - | chr1.3:8265259-8265278 | MS.gene016069:intron | 50.0% | |
| CAAGAAGGAACTCGCAAAGC+TGG | - | chr1.3:8264063-8264082 | MS.gene016069:CDS | 50.0% | |
| CAGCTTTGCGAGTTCCTTCT+TGG | + | chr1.3:8264065-8264084 | None:intergenic | 50.0% | |
| CTGCGAACACCAGCAAATCA+AGG | - | chr1.3:8265005-8265024 | MS.gene016069:intron | 50.0% | |
| CTTTGCGAGTTCCTTCTTGG+AGG | + | chr1.3:8264062-8264081 | None:intergenic | 50.0% | |
| GAAGAACGTGCACAAGCTTG+CGG | - | chr1.3:8267201-8267220 | MS.gene016069:CDS | 50.0% | |
| GCACAAGCTATTCGACCAGT+TGG | - | chr1.3:8264271-8264290 | MS.gene016069:intron | 50.0% | |
| GCGGCAAATTTCACCATCTG+CGG | + | chr1.3:8264379-8264398 | None:intergenic | 50.0% | |
| GTACCCGTTTGAACCCCTAA+AGG | - | chr1.3:8265675-8265694 | MS.gene016069:CDS | 50.0% | |
| TAACCAGAGCTCAGCAAGAG+GGG | + | chr1.3:8267375-8267394 | None:intergenic | 50.0% | |
| TCGACCAGTTGGGAAGAAGA+TGG | - | chr1.3:8264282-8264301 | MS.gene016069:intron | 50.0% | |
| TGGTTTCACCGTACAGTGCT+TGG | - | chr1.3:8264327-8264346 | MS.gene016069:CDS | 50.0% | |
| TTGCGGTGTGATACGGTGTT+GGG | - | chr1.3:8265176-8265195 | MS.gene016069:intron | 50.0% | |
| TTTGCGGTGTGATACGGTGT+TGG | - | chr1.3:8265175-8265194 | MS.gene016069:intron | 50.0% | |
| ! | GACCCCCTTGCTGTCAATTA+TGG | - | chr1.3:8264154-8264173 | MS.gene016069:intron | 50.0% |
| ! | TGCCTGAACCAAGCACTGTA+CGG | + | chr1.3:8264338-8264357 | None:intergenic | 50.0% |
| ! | TTTTTCCACGTGACCCACTC+AGG | - | chr1.3:8267547-8267566 | MS.gene016069:CDS | 50.0% |
| !! | AAAGGTGCCTCACAACAGGT+TGG | - | chr1.3:8264463-8264482 | MS.gene016069:intron | 50.0% |
| !! | CTTGATTTGCTGGTGTTCGC+AGG | + | chr1.3:8265007-8265026 | None:intergenic | 50.0% |
| AGGGTGGAGCTGCTGTCTTT+AGG | - | chr1.3:8265275-8265294 | MS.gene016069:intron | 55.0% | |
| AGTCGATGTAGCAGAGGTGG+CGG | + | chr1.3:8264119-8264138 | None:intergenic | 55.0% | |
| CAAAGGGAAACCTGCATGCC+TGG | - | chr1.3:8265306-8265325 | MS.gene016069:intron | 55.0% | |
| CAACTTCGGTCCAGTCGTCA+GGG | + | chr1.3:8264201-8264220 | None:intergenic | 55.0% | |
| CACCGTACAGTGCTTGGTTC+AGG | - | chr1.3:8264333-8264352 | MS.gene016069:CDS | 55.0% | |
| GAAGTTGAGGTGACTGAGCC+AGG | + | chr1.3:8265327-8265346 | None:intergenic | 55.0% | |
| GAGAGTCGATGTAGCAGAGG+TGG | + | chr1.3:8264122-8264141 | None:intergenic | 55.0% | |
| GCACCTTTAATAGGAGCGGC+TGG | + | chr1.3:8264451-8264470 | None:intergenic | 55.0% | |
| GTCTTACAGCCAACGGGTAC+CGG | + | chr1.3:8266891-8266910 | None:intergenic | 55.0% | |
| TATCCTTCACCGGTACCCGT+TGG | - | chr1.3:8266879-8266898 | MS.gene016069:CDS | 55.0% | |
| TATGGTGTACCACCACACGG+TGG | - | chr1.3:8267456-8267475 | MS.gene016069:CDS | 55.0% | |
| TCAACTTCGGTCCAGTCGTC+AGG | + | chr1.3:8264202-8264221 | None:intergenic | 55.0% | |
| TCATTGAGCTCCCTGACGAC+TGG | - | chr1.3:8264188-8264207 | MS.gene016069:intron | 55.0% | |
| TCGTCAGGGAGCTCAATGAG+CGG | + | chr1.3:8264187-8264206 | None:intergenic | 55.0% | |
| TGACGACTGGACCGAAGTTG+AGG | - | chr1.3:8264201-8264220 | MS.gene016069:intron | 55.0% | |
| TGCACAAGCTTGCGGCATTG+AGG | - | chr1.3:8267209-8267228 | MS.gene016069:CDS | 55.0% | |
| TGGAGCTGCTGTCTTTAGGC+TGG | - | chr1.3:8265279-8265298 | MS.gene016069:intron | 55.0% | |
| ! | AGCAGGTTCTAATCCGTGGG+AGG | - | chr1.3:8264248-8264267 | MS.gene016069:intron | 55.0% |
| ! | GAATAGCTTGTGCCCTCCCA+CGG | + | chr1.3:8264264-8264283 | None:intergenic | 55.0% |
| ! | GCAGGTTCTAATCCGTGGGA+GGG | - | chr1.3:8264249-8264268 | MS.gene016069:intron | 55.0% |
| ! | GGTGTGATACGGTGTTGGGT+AGG | - | chr1.3:8265180-8265199 | MS.gene016069:intron | 55.0% |
| ACTCCAAAGCCACCGTGTGG+TGG | + | chr1.3:8267468-8267487 | None:intergenic | 60.0% | |
| CCTACTCCAAAGCCACCGTG+TGG | + | chr1.3:8267471-8267490 | None:intergenic | 60.0% | |
| CGTCAGGGAGCTCAATGAGC+GGG | + | chr1.3:8264186-8264205 | None:intergenic | 60.0% | |
| GCAATCCTGAGTGGGTCACG+TGG | + | chr1.3:8267555-8267574 | None:intergenic | 60.0% | |
| GTACCACCACACGGTGGCTT+TGG | - | chr1.3:8267462-8267481 | MS.gene016069:CDS | 60.0% | |
| !! | CCACACGGTGGCTTTGGAGT+AGG | - | chr1.3:8267468-8267487 | MS.gene016069:CDS | 60.0% |
| !! | CGGTGGCTTTGGAGTAGGCT+TGG | - | chr1.3:8267473-8267492 | MS.gene016069:CDS | 60.0% |
| AGACTCACGGCTGAGAGCGG+CGG | + | chr1.3:8264398-8264417 | None:intergenic | 65.0% | |
| CTGCCCCTCTTGCTGAGCTC+TGG | - | chr1.3:8267369-8267388 | MS.gene016069:CDS | 65.0% | |
| GGTGACTGAGCCAGGCATGC+AGG | + | chr1.3:8265319-8265338 | None:intergenic | 65.0% | |
| ! | AGGTGGCGGCGGCAACTTCT+CGG | + | chr1.3:8264105-8264124 | None:intergenic | 65.0% |
| ! | CGATGTAGCAGAGGTGGCGG+CGG | + | chr1.3:8264116-8264135 | None:intergenic | 65.0% |
| !! | CAGCCAACGGGTACCGGTGA+AGG | + | chr1.3:8266885-8266904 | None:intergenic | 65.0% |
| TGGCGGCGGCAACTTCTCGG+CGG | + | chr1.3:8264102-8264121 | None:intergenic | 70.0% | |
| CGGCGGCAACTTCTCGGCGG+CGG | + | chr1.3:8264099-8264118 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 8264001 | 8267581 | 8264001 | ID=MS.gene016069 |
| chr1.3 | mRNA | 8264001 | 8267581 | 8264001 | ID=MS.gene016069.t1;Parent=MS.gene016069 |
| chr1.3 | exon | 8267102 | 8267581 | 8267102 | ID=MS.gene016069.t1.exon1;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8267102 | 8267581 | 8267102 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8266856 | 8266966 | 8266856 | ID=MS.gene016069.t1.exon2;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8266856 | 8266966 | 8266856 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8266524 | 8266637 | 8266524 | ID=MS.gene016069.t1.exon3;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8266524 | 8266637 | 8266524 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8266090 | 8266380 | 8266090 | ID=MS.gene016069.t1.exon4;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8266090 | 8266380 | 8266090 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8265886 | 8265996 | 8265886 | ID=MS.gene016069.t1.exon5;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8265886 | 8265996 | 8265886 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8265662 | 8265715 | 8265662 | ID=MS.gene016069.t1.exon6;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8265662 | 8265715 | 8265662 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8264819 | 8264898 | 8264819 | ID=MS.gene016069.t1.exon7;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8264819 | 8264898 | 8264819 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8264606 | 8264721 | 8264606 | ID=MS.gene016069.t1.exon8;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8264606 | 8264721 | 8264606 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8264317 | 8264431 | 8264317 | ID=MS.gene016069.t1.exon9;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8264317 | 8264431 | 8264317 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| chr1.3 | exon | 8264001 | 8264127 | 8264001 | ID=MS.gene016069.t1.exon10;Parent=MS.gene016069.t1 |
| chr1.3 | CDS | 8264001 | 8264127 | 8264001 | ID=cds.MS.gene016069.t1;Parent=MS.gene016069.t1 |
| Gene Sequence |
| Protein sequence |
