AlfalfaGEDB | MS.gene34567

M. sativa cultivar XinJiangDaYe / MS.gene34567

KEGG: K22503
GO: GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004815 GO:0005488 GO:0005524 GO:0005575 GO:0005737 GO:0006082 GO:0006139 GO:0006399 GO:0006418 GO:0006422 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016070 GO:0016874 GO:0016875 GO:0017076 GO:0019752 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034660 GO:0035639 GO:0036094 GO:0043038 GO:0043039 GO:0043167 GO:0043168 GO:0043170 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:0097367 GO:0110165 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564
PFAM: PF00152.23 PF01336.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34567.t1	XP_003588866.1	98.3	541	9	0	1	541	1	541	6.00E-290	1006.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34567.t1	Q9M084	68.0	500	150	2	52	541	59	558	1.1e-199	697.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34567.t1	G7I885	98.3	541	9	0	1	541	1	541	4.4e-290	1006.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050330	MS.gene34567	0.812704	3.71E-51	-1.69E-46
MS.gene052309	MS.gene34567	0.803049	4.20E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene34567	MS.gene68406	PPI
MS.gene34567	MS.gene41693	PPI
MS.gene34567	MS.gene92603	PPI
MS.gene34567	MS.gene98464	PPI
MS.gene34567	MS.gene031761	PPI
MS.gene34567	MS.gene69612	PPI
MS.gene34567	MS.gene016068	PPI
MS.gene62686	MS.gene34567	PPI
MS.gene34567	MS.gene000635	PPI
MS.gene34567	MS.gene26848	PPI
MS.gene035805	MS.gene34567	PPI
MS.gene51584	MS.gene34567	PPI
MS.gene015655	MS.gene34567	PPI
MS.gene052373	MS.gene34567	PPI
MS.gene87898	MS.gene34567	PPI
MS.gene009724	MS.gene34567	PPI
MS.gene34567	MS.gene71536	PPI
MS.gene33127	MS.gene34567	PPI
MS.gene34567	MS.gene98973	PPI
MS.gene82109	MS.gene34567	PPI
MS.gene51548	MS.gene34567	PPI
MS.gene34567	MS.gene037771	PPI
MS.gene71257	MS.gene34567	PPI
MS.gene34567	MS.gene016069	PPI
MS.gene34567	MS.gene066960	PPI
MS.gene34567	MS.gene025532	PPI
MS.gene34567	MS.gene98468	PPI
MS.gene67234	MS.gene34567	PPI
MS.gene34567	MS.gene83067	PPI
MS.gene028001	MS.gene34567	PPI
MS.gene51907	MS.gene34567	PPI
MS.gene67235	MS.gene34567	PPI
MS.gene000626	MS.gene34567	PPI
MS.gene34567	MS.gene49838	PPI
MS.gene34567	MS.gene026529	PPI
MS.gene79799	MS.gene34567	PPI
MS.gene34567	MS.gene064542	PPI
MS.gene34567	MS.gene016071	PPI
MS.gene33126	MS.gene34567	PPI
MS.gene34567	MS.gene99709	PPI
MS.gene34567	MS.gene052674	PPI
MS.gene042871	MS.gene34567	PPI
MS.gene80766	MS.gene34567	PPI
MS.gene26309	MS.gene34567	PPI
MS.gene34567	MS.gene71256	PPI
MS.gene34567	MS.gene47284	PPI
MS.gene067774	MS.gene34567	PPI
MS.gene34567	MS.gene55626	PPI
MS.gene34567	MS.gene020517	PPI
MS.gene34567	MS.gene052675	PPI
MS.gene34567	MS.gene98264	PPI
MS.gene34567	MS.gene039458	PPI
MS.gene51586	MS.gene34567	PPI
MS.gene067063	MS.gene34567	PPI
MS.gene34567	MS.gene052677	PPI
MS.gene016068	MS.gene34567	PPI
MS.gene34567	MS.gene73119	PPI
MS.gene34567	MS.gene065875	PPI
MS.gene34567	MS.gene061256	PPI
MS.gene34567	MS.gene51944	PPI
MS.gene34567	MS.gene25185	PPI
MS.gene51549	MS.gene34567	PPI
MS.gene34567	MS.gene030099	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34567.t1	MTR_1g014140	98.706	541	7	0	1	541	1	541	0.0	1104
MS.gene34567.t1	MTR_5g028360	71.009	545	137	4	1	541	62	589	0.0	771
MS.gene34567.t1	MTR_4g100920	25.506	494	286	16	87	536	86	541	5.03e-32	130
MS.gene34567.t1	MTR_8g102050	30.961	281	174	8	271	538	275	548	5.09e-28	118
MS.gene34567.t1	MTR_7g101050	31.560	282	173	10	271	538	298	573	5.02e-27	115
MS.gene34567.t1	MTR_2g036600	23.878	490	324	15	83	533	109	588	3.84e-23	103
MS.gene34567.t1	MTR_4g127770	22.200	491	322	15	87	533	601	1075	5.16e-20	94.7
MS.gene34567.t1	MTR_8g007295	22.691	498	295	18	90	533	111	572	6.44e-16	81.3
MS.gene34567.t1	MTR_4g127790	22.969	357	239	10	209	532	32	385	5.74e-15	77.4
MS.gene34567.t1	MTR_4g052070	27.953	254	150	9	92	333	72	304	2.20e-11	67.0
MS.gene34567.t1	MTR_8g011530	22.846	267	189	8	278	534	367	626	2.27e-11	67.0
MS.gene34567.t1	MTR_8g007295	24.468	282	180	9	90	368	111	362	7.58e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene34567.t1	AT4G31180	64.632	557	179	4	3	541	2	558	0.0	733
MS.gene34567.t1	AT4G31180	64.632	557	179	4	3	541	2	558	0.0	733
MS.gene34567.t1	AT4G26870	65.825	515	170	4	28	541	23	532	0.0	694
MS.gene34567.t1	AT5G56680	30.882	272	168	8	278	536	303	567	2.71e-29	122
MS.gene34567.t1	AT4G17300	25.751	466	251	15	122	536	161	582	2.87e-28	119
MS.gene34567.t1	AT4G17300	25.751	466	251	15	122	536	141	562	3.17e-28	119
MS.gene34567.t1	AT1G70980	29.304	273	173	7	278	536	300	566	3.01e-25	110
MS.gene34567.t1	AT3G13490	22.133	497	294	17	94	533	136	596	2.55e-17	85.9

Find 137 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAGCTTTGCGGCATCCTTCT+TGG	0.168840	6.3:-53099388	None:intergenic
ATTCCAGCCGCTCCTATTAA+AGG	0.200895	6.3:+53099789	MS.gene34567:CDS
CAAACAAATTAACACCTTTA+GGG	0.270476	6.3:-53101028	None:intergenic
ATGTCAATATGTGGTGATTT+TGG	0.279212	6.3:+53100694	MS.gene34567:CDS
TTCTTAGTCATCAGAGAAAA+TGG	0.279492	6.3:+53099651	MS.gene34567:CDS
CGGAAAATTCCTTGATTTGC+TGG	0.282793	6.3:-53100353	None:intergenic
TCAAAAGAGTTACTGTAGTT+TGG	0.284688	6.3:-53102277	None:intergenic
GATCCCCTTGCTGTCAATTA+TGG	0.290000	6.3:+53099477	MS.gene34567:CDS
TATGTAAGCCGCAGAGTATT+TGG	0.299031	6.3:-53101212	None:intergenic
TGAAATTGAGAAGGCCATTC+AGG	0.299926	6.3:+53100044	MS.gene34567:CDS
TGTTGTGAGGCACCTTTAAT+AGG	0.308209	6.3:-53099801	None:intergenic
AGGCATCTGTGCGAGTTTAC+AGG	0.319353	6.3:+53100769	MS.gene34567:CDS
CAAAAGAGTTACTGTAGTTT+GGG	0.335107	6.3:-53102276	None:intergenic
CACCGTACAGTGCTTGGTTC+AGG	0.346864	6.3:+53099677	MS.gene34567:CDS
CACAATACAGTTTCCTCACT+TGG	0.354867	6.3:-53099963	None:intergenic
CAGAAGATTCCTTTACTCAT+AGG	0.359787	6.3:+53100749	MS.gene34567:CDS
CACACTCCTAAGTTGATTGC+TGG	0.375345	6.3:+53100583	MS.gene34567:CDS
GTCCAGTCGTTGACATTGAC+AGG	0.393463	6.3:-53099534	None:intergenic
TAGCAAGGCATTGTATAAAA+TGG	0.394303	6.3:-53102247	None:intergenic
AGGTGGCGGCGGCAACTTCT+CGG	0.397158	6.3:-53099425	None:intergenic
GTACCACCACACGGTGGCTT+TGG	0.402704	6.3:+53102806	MS.gene34567:CDS
ACAACTTGTTCGTGTGAATC+AGG	0.411639	6.3:+53100292	MS.gene34567:CDS
CAAAGGGCAACCTGCATGCC+TGG	0.419819	6.3:+53100645	MS.gene34567:CDS
TACAGGTCTTGATGTTGAAA+TGG	0.423398	6.3:+53100786	MS.gene34567:CDS
CAAGAAGGATGCCGCAAAGC+TGG	0.423709	6.3:+53099389	MS.gene34567:CDS
AGGGTGGAGCTGCTGTCTTT+AGG	0.428133	6.3:+53100614	MS.gene34567:CDS
CTTTGCGGCATCCTTCTTGG+AGG	0.431699	6.3:-53099385	None:intergenic
GGAGTAGAGATTGAACCTTT+TGG	0.442706	6.3:+53102027	MS.gene34567:CDS
CATTGACAGGGGTCTTCGAT+TGG	0.443151	6.3:-53099521	None:intergenic
AACACCTTTAGGGGTTCAAA+CGG	0.444877	6.3:-53101018	None:intergenic
ATCTGCGGACTCACTAAATC+AGG	0.450583	6.3:-53099705	None:intergenic
CTTGATTTGCTGGTGTTCGC+AGG	0.452358	6.3:-53100343	None:intergenic
AACGCCATCTTCTTCCCAAC+TGG	0.452718	6.3:-53099630	None:intergenic
GCCCTCCCACGGATTAGAAC+CGG	0.456675	6.3:-53099594	None:intergenic
GCAGCATCCTCGATATTAAT+CGG	0.461821	6.3:-53100009	None:intergenic
TGGAGCTGCTGTCTTTAGGC+TGG	0.464922	6.3:+53100618	MS.gene34567:CDS
GATTAAGAAACATTATTATG+AGG	0.466183	6.3:+53100810	MS.gene34567:CDS
TTACATTTCCAACTTGAGAC+TGG	0.472065	6.3:-53100379	None:intergenic
TATTAAAGGTGCCTCACAAC+AGG	0.473545	6.3:+53099803	MS.gene34567:CDS
CGGTGGCTTTGGAGTAGGCT+TGG	0.490259	6.3:+53102817	MS.gene34567:CDS
TTAGGCGAGGAGATAATATC+AGG	0.491304	6.3:+53102490	MS.gene34567:intron
TGAGGCTCTCAATGATTCAC+TGG	0.499024	6.3:+53099563	MS.gene34567:CDS
TGGTTTCACCGTACAGTGCT+TGG	0.499781	6.3:+53099671	MS.gene34567:CDS
AAAATGGTCTTACAGCCAAC+GGG	0.502027	6.3:-53102231	None:intergenic
GTCTTACAGCCAACGGGTAC+CGG	0.506627	6.3:-53102225	None:intergenic
TCAGTATTCAAGTCACCAAA+AGG	0.506705	6.3:-53102042	None:intergenic
CTAGATCCAGCAATCAACTT+AGG	0.510006	6.3:-53100589	None:intergenic
TTTAATAGGAGCGGCTGGAA+TGG	0.513685	6.3:-53099787	None:intergenic
GAGTCTATTGTCGATGTCGA+AGG	0.513770	6.3:+53099756	MS.gene34567:CDS
GCACCTTTAATAGGAGCGGC+TGG	0.516328	6.3:-53099792	None:intergenic
CACAAGCTATTCGACCAGTT+GGG	0.517268	6.3:+53099616	MS.gene34567:CDS
GCACAAGCTATTCGACCAGT+TGG	0.517849	6.3:+53099615	MS.gene34567:CDS
ACACCTTTAGGGGTTCAAAC+GGG	0.524064	6.3:-53101017	None:intergenic
CAGCCAACGGGTACCGGTGA+AGG	0.524085	6.3:-53102219	None:intergenic
CTGCGGCTTACATATGAAGA+AGG	0.526092	6.3:+53101221	MS.gene34567:CDS
AATGAATATATATACCTGAA+TGG	0.529761	6.3:-53100058	None:intergenic
GAAACTGTATTGTGTGAGTA+AGG	0.532678	6.3:+53099972	MS.gene34567:CDS
AAACAAATTAACACCTTTAG+GGG	0.533347	6.3:-53101027	None:intergenic
GAATAGCTTGTGCCCTCCCA+CGG	0.535699	6.3:-53099605	None:intergenic
TTCCGCATCCAGTCTCAAGT+TGG	0.536075	6.3:+53100371	MS.gene34567:CDS
CTGCGAACACCAGCAAATCA+AGG	0.537117	6.3:+53100344	MS.gene34567:CDS
GAAGTTGAGGTGACTGAGCC+AGG	0.538658	6.3:-53100663	None:intergenic
AGAAAGGAAACTAGGCCAGC+TGG	0.539715	6.3:+53102068	MS.gene34567:CDS
TCTTTAGGCTGGACTACAAA+GGG	0.542694	6.3:+53100629	MS.gene34567:CDS
CGATGTAGCAGAGGTGGCGG+CGG	0.543849	6.3:-53099436	None:intergenic
CCACACGGTGGCTTTGGAGT+AGG	0.547341	6.3:+53102812	MS.gene34567:CDS
AACAAGCCGGTTCTAATCCG+TGG	0.547533	6.3:+53099588	MS.gene34567:CDS
TTTGAACACAAAATGTAAGA+AGG	0.547679	6.3:+53100969	MS.gene34567:CDS
CCCCTGTCAATGTCAACGAC+TGG	0.551263	6.3:+53099532	MS.gene34567:CDS
TAAAATGGTCTTACAGCCAA+CGG	0.552316	6.3:-53102232	None:intergenic
TCGATATTAATCGGCAGAGT+AGG	0.553228	6.3:-53100000	None:intergenic
GGTGACTGAGCCAGGCATGC+AGG	0.555621	6.3:-53100655	None:intergenic
TCGATTGGAGCTCAATGAGC+GGG	0.557785	6.3:-53099506	None:intergenic
GACATTTGCTTGTGAAGTTG+AGG	0.558674	6.3:-53100676	None:intergenic
GCACAGATGCCTATGAGTAA+AGG	0.560403	6.3:-53100758	None:intergenic
CACAAGCAAATGTCAATATG+TGG	0.561198	6.3:+53100685	MS.gene34567:CDS
TTCCAACTTGAGACTGGATG+CGG	0.563223	6.3:-53100373	None:intergenic
AGTCGATGTAGCAGAGGTGG+CGG	0.572655	6.3:-53099439	None:intergenic
CAGAGTTCTATATCCTTCAC+CGG	0.573477	6.3:+53102206	MS.gene34567:CDS
ATTAATCGGCAGAGTAGGAA+TGG	0.575600	6.3:-53099995	None:intergenic
TAGTTTGGGTTGTCATAGCA+AGG	0.575643	6.3:-53102262	None:intergenic
GAAGAACGTGCACAAGCTTG+CGG	0.577219	6.3:+53102544	MS.gene34567:CDS
TTTATCCACGTGACCCACTC+AGG	0.577438	6.3:+53102891	MS.gene34567:CDS
GTCTTTAGGCTGGACTACAA+AGG	0.579932	6.3:+53100628	MS.gene34567:CDS
TCGACCAGTTGGGAAGAAGA+TGG	0.581394	6.3:+53099626	MS.gene34567:CDS
AGACTCACGGCTGAGAGCGG+CGG	0.581736	6.3:-53099739	None:intergenic
TGCACAAGCTTGCGGCATTG+AGG	0.583418	6.3:+53102552	MS.gene34567:CDS
AATCATTGAGAGCCTCAACT+CGG	0.583678	6.3:-53099557	None:intergenic
ACTGAAGCAGAAAGGAAACT+AGG	0.584857	6.3:+53102060	MS.gene34567:CDS
GAGAGTCGATGTAGCAGAGG+TGG	0.585897	6.3:-53099442	None:intergenic
TACTCTGCCGATTAATATCG+AGG	0.589627	6.3:+53100002	MS.gene34567:CDS
TCCAGTCGTTGACATTGACA+GGG	0.592334	6.3:-53099533	None:intergenic
AGAGAGAGTCGATGTAGCAG+AGG	0.593608	6.3:-53099445	None:intergenic
ACTTGAATACTGAAGCAGAA+AGG	0.595013	6.3:+53102052	MS.gene34567:CDS
TGATTTAGTGAGTCCGCAGA+TGG	0.596877	6.3:+53099707	MS.gene34567:CDS
GTACCCGTTTGAACCCCTAA+AGG	0.597654	6.3:+53101014	MS.gene34567:CDS
ATCATTGAGAGCCTCAACTC+GGG	0.599803	6.3:-53099556	None:intergenic
CAACGACTGGACCCGAGTTG+AGG	0.600329	6.3:+53099545	MS.gene34567:CDS
TCAAGAGCCGACACTGTCAT+CGG	0.603493	6.3:+53099335	MS.gene34567:CDS
GATCCTTCCGATGACAGTGT+CGG	0.605021	6.3:-53099342	None:intergenic
TGAGGCACCTTTAATAGGAG+CGG	0.608618	6.3:-53099796	None:intergenic
TATCCTTCACCGGTACCCGT+TGG	0.609544	6.3:+53102216	MS.gene34567:CDS
GCCGGTTCTAATCCGTGGGA+GGG	0.610769	6.3:+53099593	MS.gene34567:CDS
TTCGATTGGAGCTCAATGAG+CGG	0.611035	6.3:-53099507	None:intergenic
CAGCAATCAACTTAGGAGTG+TGG	0.611888	6.3:-53100582	None:intergenic
TGATTCACTGGAGAACAAGC+CGG	0.613416	6.3:+53099575	MS.gene34567:CDS
GCGGCAAATTTCACCATCTG+CGG	0.614321	6.3:-53099720	None:intergenic
ATTGCTGGATCTAGTGAGGG+TGG	0.614640	6.3:+53100598	MS.gene34567:CDS
ATACCATAATTGACAGCAAG+GGG	0.614733	6.3:-53099480	None:intergenic
ACAAGCCGGTTCTAATCCGT+GGG	0.615482	6.3:+53099589	MS.gene34567:CDS
TATTGTCGATGTCGAAGGTG+TGG	0.616371	6.3:+53099761	MS.gene34567:CDS
ATCATGGTGCAATCCTGAGT+GGG	0.620490	6.3:-53102904	None:intergenic
AATAGACTCACGGCTGAGAG+CGG	0.623488	6.3:-53099742	None:intergenic
AGCCGGTTCTAATCCGTGGG+AGG	0.623958	6.3:+53099592	MS.gene34567:CDS
AAGTGAAGTTGAAATTGAGA+AGG	0.624126	6.3:+53100035	MS.gene34567:CDS
GAGCCGACACTGTCATCGGA+AGG	0.625324	6.3:+53099339	MS.gene34567:CDS
TAAGAAGGATCTCGAAGCTG+TGG	0.629352	6.3:+53100984	MS.gene34567:CDS
GTTGATTGCTGGATCTAGTG+AGG	0.632210	6.3:+53100594	MS.gene34567:CDS
CAATACCATAATTGACAGCA+AGG	0.634292	6.3:-53099482	None:intergenic
CGTGTAGTAATGCTCTTCTG+TGG	0.635161	6.3:+53102842	MS.gene34567:CDS
TGCCTGAACCAAGCACTGTA+CGG	0.635520	6.3:-53099679	None:intergenic
ATCATAACCAACCTGTTGTG+AGG	0.639858	6.3:-53099814	None:intergenic
AGAAGGTATTCAGATGCTCA+AGG	0.641602	6.3:+53101238	MS.gene34567:CDS
TTGATTGCTGGATCTAGTGA+GGG	0.644845	6.3:+53100595	MS.gene34567:CDS
ACTCCAAAGCCACCGTGTGG+TGG	0.646949	6.3:-53102809	None:intergenic
CATCATGGTGCAATCCTGAG+TGG	0.650761	6.3:-53102905	None:intergenic
CGACATCGACAATAGACTCA+CGG	0.651944	6.3:-53099752	None:intergenic
GAATCTTCTGCTCTAAACAC+AGG	0.652142	6.3:-53100736	None:intergenic
AGATATGGTGTACCACCACA+CGG	0.671410	6.3:+53102797	MS.gene34567:intron
TATAGGTTGAAATCCAAGTG+AGG	0.674003	6.3:+53099950	MS.gene34567:intron
GCAATCCTGAGTGGGTCACG+TGG	0.689157	6.3:-53102896	None:intergenic
AATACCATAATTGACAGCAA+GGG	0.690003	6.3:-53099481	None:intergenic
TGGCGGCGGCAACTTCTCGG+CGG	0.706873	6.3:-53099422	None:intergenic
CCTACTCCAAAGCCACCGTG+TGG	0.729566	6.3:-53102812	None:intergenic
CCAGTCGTTGACATTGACAG+GGG	0.731951	6.3:-53099532	None:intergenic
AGTATCTTCCAAATACTCTG+CGG	0.740430	6.3:+53101204	MS.gene34567:intron
TATGGTGTACCACCACACGG+TGG	0.820152	6.3:+53102800	MS.gene34567:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ACTAAATTATAATGATTTTA+TGG	+	chr6.3:53102730-53102749	MS.gene34567:intron	10.0%
!!!	CTAAATTATAATGATTTTAT+GGG	+	chr6.3:53102731-53102750	MS.gene34567:intron	10.0%
!!!	TAAATTATAATGATTTTATG+GGG	+	chr6.3:53102732-53102751	MS.gene34567:intron	10.0%
!!	AGAATAATATTAGAGAAAAT+AGG	-	chr6.3:53100407-53100426	None:intergenic	15.0%
!!	ATTATATAAATGTCATTGAA+AGG	+	chr6.3:53101522-53101541	MS.gene34567:intron	15.0%
!!	TTTCAATTTAATTCAAGAAA+AGG	+	chr6.3:53101745-53101764	MS.gene34567:intron	15.0%
!!	TTTCTTGAATTAAATTGAAA+AGG	-	chr6.3:53101745-53101764	None:intergenic	15.0%
!!!	ATCATTATAATTTAGTTTTC+TGG	-	chr6.3:53102726-53102745	None:intergenic	15.0%
!!!	GATTTTGATTTTGATTATAA+TGG	+	chr6.3:53099907-53099926	MS.gene34567:intron	15.0%
!!	AAATTGATGAAAATGTACTT+GGG	+	chr6.3:53101564-53101583	MS.gene34567:intron	20.0%
!!	AACCAAATAATTGTAACTAT+TGG	+	chr6.3:53101715-53101734	MS.gene34567:intron	20.0%
!!	AATAGTTACAATTATTTGGT+TGG	-	chr6.3:53101716-53101735	None:intergenic	20.0%
!!	AATGAATATATATACCTGAA+TGG	-	chr6.3:53100061-53100080	None:intergenic	20.0%
!!	ACCAAATAATTGTAACTATT+GGG	+	chr6.3:53101716-53101735	MS.gene34567:intron	20.0%
!!	ACTGTAACTATGATATATAT+AGG	+	chr6.3:53101928-53101947	MS.gene34567:intron	20.0%
!!	GATTAAGAAACATTATTATG+AGG	+	chr6.3:53100810-53100829	MS.gene34567:CDS	20.0%
!!	TAAATTGATGAAAATGTACT+TGG	+	chr6.3:53101563-53101582	MS.gene34567:intron	20.0%
!!	TAACTATGATATATATAGGA+TGG	+	chr6.3:53101932-53101951	MS.gene34567:intron	20.0%
!!	TCAATTACAACATTTCTAAT+CGG	-	chr6.3:53100085-53100104	None:intergenic	20.0%
!!	TGTAATTCTATTTATAGGTA+TGG	+	chr6.3:53102181-53102200	MS.gene34567:intron	20.0%
!!	TTTAAACTTTACAACAAGAT+TGG	-	chr6.3:53101472-53101491	None:intergenic	20.0%
!!!	CAATTTATTTGTTTTGTAGT+GGG	+	chr6.3:53101089-53101108	MS.gene34567:intron	20.0%
!!!	CATTTCTTAAGTTAGTTTAT+CGG	-	chr6.3:53100491-53100510	None:intergenic	20.0%
!!!	TCAATTTATTTGTTTTGTAG+TGG	+	chr6.3:53101088-53101107	MS.gene34567:intron	20.0%
!!!	TCAATTTTACAAAATAGACA+GGG	-	chr6.3:53101365-53101384	None:intergenic	20.0%
!!!	TCTATTTTGTAAAATTGAGA+GGG	+	chr6.3:53101367-53101386	MS.gene34567:intron	20.0%
!!!	TCTGGTTATAATGATTTTAT+GGG	+	chr6.3:53102685-53102704	MS.gene34567:intron	20.0%
!!!	TGTTGTTTTGTTTAATATAC+TGG	+	chr6.3:53100211-53100230	MS.gene34567:intron	20.0%
!	AAACAAATTAACACCTTTAG+GGG	-	chr6.3:53101030-53101049	None:intergenic	25.0%
!	AAAGGACATAGTTATTTGAT+TGG	+	chr6.3:53101763-53101782	MS.gene34567:intron	25.0%
!	ACATTATTATGAGGTACATT+TGG	+	chr6.3:53100819-53100838	MS.gene34567:intron	25.0%
!	ATCAGAAACAAAAAGCAAAA+AGG	+	chr6.3:53099362-53099381	MS.gene34567:CDS	25.0%
!	CAAACAAATTAACACCTTTA+GGG	-	chr6.3:53101031-53101050	None:intergenic	25.0%
!	CCAAATAATTGTAACTATTG+GGG	+	chr6.3:53101717-53101736	MS.gene34567:intron	25.0%
!	GATAAACAAACAAATGTGAT+AGG	+	chr6.3:53101302-53101321	MS.gene34567:intron	25.0%
!	GTTCAATGTCTTTGTTAATA+CGG	+	chr6.3:53102635-53102654	MS.gene34567:intron	25.0%
!	TATAAGATTAAACTGTACAC+AGG	-	chr6.3:53101422-53101441	None:intergenic	25.0%
!	TCGACTGTAATTCTATTTAT+AGG	+	chr6.3:53102176-53102195	MS.gene34567:intron	25.0%
!	TGATTGATCATTTACAGATA+TGG	+	chr6.3:53102782-53102801	MS.gene34567:intron	25.0%
!	TTCAATGTCTTTGTTAATAC+GGG	+	chr6.3:53102636-53102655	MS.gene34567:intron	25.0%
!	TTTAGTCATTTCATTGATGA+TGG	+	chr6.3:53101643-53101662	MS.gene34567:intron	25.0%
!	TTTGAACACAAAATGTAAGA+AGG	+	chr6.3:53100969-53100988	MS.gene34567:CDS	25.0%
!!	AACTTAAGAAATGCATTTTG+CGG	+	chr6.3:53100498-53100517	MS.gene34567:intron	25.0%
!!	AATGCTTTGTTATGACAATT+TGG	+	chr6.3:53102346-53102365	MS.gene34567:intron	25.0%
!!	ACTGATACTTTTGTGTTTTT+TGG	+	chr6.3:53100899-53100918	MS.gene34567:intron	25.0%
!!	AGTTATAAAAGATTTGAGAC+AGG	-	chr6.3:53102111-53102130	None:intergenic	25.0%
!!	CTAAATGAGATCTCATTTTA+TGG	-	chr6.3:53101628-53101647	None:intergenic	25.0%
!!	CTATTTTGTAAAATTGAGAG+GGG	+	chr6.3:53101368-53101387	MS.gene34567:intron	25.0%
!!	CTCAATTTTACAAAATAGAC+AGG	-	chr6.3:53101366-53101385	None:intergenic	25.0%
!!	CTCTGGTTATAATGATTTTA+TGG	+	chr6.3:53102684-53102703	MS.gene34567:intron	25.0%
!!	CTGGTTATAATGATTTTATG+GGG	+	chr6.3:53102686-53102705	MS.gene34567:intron	25.0%
!!	GTCTATTTTGTAAAATTGAG+AGG	+	chr6.3:53101366-53101385	MS.gene34567:intron	25.0%
!!	GTTATAAAAGATTTGAGACA+GGG	-	chr6.3:53102110-53102129	None:intergenic	25.0%
!!	GTTATGATATCTTGTTACTT+AGG	+	chr6.3:53099829-53099848	MS.gene34567:intron	25.0%
!!	TGGAATTTTCAAAAATTGGA+GGG	-	chr6.3:53101696-53101715	None:intergenic	25.0%
!!	TGGTTGGAATTTTCAAAAAT+TGG	-	chr6.3:53101700-53101719	None:intergenic	25.0%
!!	TTGGAATTTTCAAAAATTGG+AGG	-	chr6.3:53101697-53101716	None:intergenic	25.0%
!!!	CTAAAGGTGTTAATTTGTTT+GGG	+	chr6.3:53101030-53101049	MS.gene34567:intron	25.0%
!!!	TGATCAATCATTTAGTTTTC+TGG	-	chr6.3:53102772-53102791	None:intergenic	25.0%
!!!	TTCCTCTTTTAGTTAGTTTT+GGG	+	chr6.3:53101848-53101867	MS.gene34567:intron	25.0%
!!!	TTGATTATAATGGTGTTATG+TGG	+	chr6.3:53099917-53099936	MS.gene34567:intron	25.0%
!!!	TTTCCTCTTTTAGTTAGTTT+TGG	+	chr6.3:53101847-53101866	MS.gene34567:intron	25.0%
	AAGTGAAGTTGAAATTGAGA+AGG	+	chr6.3:53100035-53100054	MS.gene34567:CDS	30.0%
	AATACCATAATTGACAGCAA+GGG	-	chr6.3:53099484-53099503	None:intergenic	30.0%
	ACAAAGACATTGAACATGAT+AGG	-	chr6.3:53102630-53102649	None:intergenic	30.0%
	ACACACATCTTTAATCAGAA+AGG	-	chr6.3:53100187-53100206	None:intergenic	30.0%
	CAAAAGAGTTACTGTAGTTT+GGG	-	chr6.3:53102279-53102298	None:intergenic	30.0%
	CCAAACAAATTAACACCTTT+AGG	-	chr6.3:53101032-53101051	None:intergenic	30.0%
	CCCCAATAGTTACAATTATT+TGG	-	chr6.3:53101720-53101739	None:intergenic	30.0%
	TCAAAAGAGTTACTGTAGTT+TGG	-	chr6.3:53102280-53102299	None:intergenic	30.0%
	TTCTTAGTCATCAGAGAAAA+TGG	+	chr6.3:53099651-53099670	MS.gene34567:CDS	30.0%
	TTTGTGAGTTGTGATTGTTT+AGG	+	chr6.3:53099885-53099904	MS.gene34567:intron	30.0%
!	ATGTCAATATGTGGTGATTT+TGG	+	chr6.3:53100694-53100713	MS.gene34567:CDS	30.0%
!	TATGGAAGTACAAACACATT+TGG	-	chr6.3:53102415-53102434	None:intergenic	30.0%
!	TCTTAAGTTAGTTTATCGGT+AGG	-	chr6.3:53100487-53100506	None:intergenic	30.0%
!!	ATACTTTTGTGTTTTTTGGC+AGG	+	chr6.3:53100903-53100922	MS.gene34567:intron	30.0%
!!	CCTAAAGGTGTTAATTTGTT+TGG	+	chr6.3:53101029-53101048	MS.gene34567:intron	30.0%
!!	TAGCAAGGCATTGTATAAAA+TGG	-	chr6.3:53102250-53102269	None:intergenic	30.0%
!!	TTCATTGATGATGGTAGTTT+GGG	+	chr6.3:53101652-53101671	MS.gene34567:intron	30.0%
!!	TTTCATTGATGATGGTAGTT+TGG	+	chr6.3:53101651-53101670	MS.gene34567:intron	30.0%
!!!	ATTACTTTTCTAAAACCAGC+TGG	-	chr6.3:53102086-53102105	None:intergenic	30.0%
!!!	GTTGATGGTGATTTTTTAAC+TGG	+	chr6.3:53100256-53100275	MS.gene34567:intron	30.0%
!!!	TATGTGGTTTTGTTCTCTAT+AGG	+	chr6.3:53099933-53099952	MS.gene34567:intron	30.0%
!!!	TTTAGTTAGTTTTGGGAGTT+TGG	+	chr6.3:53101855-53101874	MS.gene34567:intron	30.0%
	AACTATTGTTGAGGAATTCC+TGG	+	chr6.3:53101818-53101837	MS.gene34567:intron	35.0%
	ACTATTGTTGAGGAATTCCT+GGG	+	chr6.3:53101819-53101838	MS.gene34567:intron	35.0%
	ACTTGAATACTGAAGCAGAA+AGG	+	chr6.3:53102052-53102071	MS.gene34567:CDS	35.0%
	AGTATCTTCCAAATACTCTG+CGG	+	chr6.3:53101204-53101223	MS.gene34567:intron	35.0%
	ATACCATAATTGACAGCAAG+GGG	-	chr6.3:53099483-53099502	None:intergenic	35.0%
	CAAATGTGATAGGATGATGA+TGG	+	chr6.3:53101312-53101331	MS.gene34567:intron	35.0%
	CAAGTTAGTGACACTTGTTT+AGG	+	chr6.3:53101790-53101809	MS.gene34567:intron	35.0%
	CAATACCATAATTGACAGCA+AGG	-	chr6.3:53099485-53099504	None:intergenic	35.0%
	CACAAGCAAATGTCAATATG+TGG	+	chr6.3:53100685-53100704	MS.gene34567:CDS	35.0%
	CACCATCAACATTCATGTAA+GGG	-	chr6.3:53100246-53100265	None:intergenic	35.0%
	CAGAAGATTCCTTTACTCAT+AGG	+	chr6.3:53100749-53100768	MS.gene34567:CDS	35.0%
	CTCCCAAAACTAACTAAAAG+AGG	-	chr6.3:53101853-53101872	None:intergenic	35.0%
	CTTTGTTAATACGGGTGTTT+AGG	+	chr6.3:53102644-53102663	MS.gene34567:intron	35.0%
	GAAAATGTACTTGGGTAAAC+AGG	+	chr6.3:53101572-53101591	MS.gene34567:intron	35.0%
	GAAACTGTATTGTGTGAGTA+AGG	+	chr6.3:53099972-53099991	MS.gene34567:CDS	35.0%
	GAAGATACTGCACATTCATA+GGG	-	chr6.3:53101193-53101212	None:intergenic	35.0%
	GGAATTCCTCAACAATAGTT+AGG	-	chr6.3:53101818-53101837	None:intergenic	35.0%
	TAAAAGAGGAAAAATACCCC+AGG	-	chr6.3:53101839-53101858	None:intergenic	35.0%
	TACAGGTCTTGATGTTGAAA+TGG	+	chr6.3:53100786-53100805	MS.gene34567:CDS	35.0%
	TAGGTTCCTAACTATTGTTG+AGG	+	chr6.3:53101809-53101828	MS.gene34567:intron	35.0%
	TCACCATCAACATTCATGTA+AGG	-	chr6.3:53100247-53100266	None:intergenic	35.0%
	TCAGTATTCAAGTCACCAAA+AGG	-	chr6.3:53102045-53102064	None:intergenic	35.0%
	TTACATTTCCAACTTGAGAC+TGG	-	chr6.3:53100382-53100401	None:intergenic	35.0%
!	CCATAAAAGCTGAAGCTTTT+GGG	+	chr6.3:53102430-53102449	MS.gene34567:intron	35.0%
!	CTATTCAATCCTTGTTGCTT+AGG	+	chr6.3:53102472-53102491	MS.gene34567:intron	35.0%
!	GAGTAATGATTTTGCTTTGC+AGG	+	chr6.3:53101999-53102018	MS.gene34567:intron	35.0%
!	GCACGCAATTAATCATGTTT+TGG	+	chr6.3:53102370-53102389	MS.gene34567:intron	35.0%
!	TAAAATGGTCTTACAGCCAA+CGG	-	chr6.3:53102235-53102254	None:intergenic	35.0%
!	TATAGGTTGAAATCCAAGTG+AGG	+	chr6.3:53099950-53099969	MS.gene34567:intron	35.0%
!	TCCATAAAAGCTGAAGCTTT+TGG	+	chr6.3:53102429-53102448	MS.gene34567:intron	35.0%
!	TCTTTTGATGTCTTCATTCG+AGG	+	chr6.3:53102292-53102311	MS.gene34567:CDS	35.0%
!	TTTGCGTTTGAAATTGTCGA+GGG	+	chr6.3:53100862-53100881	MS.gene34567:intron	35.0%
!	TTTTGTAAAATTGAGAGGGG+TGG	+	chr6.3:53101371-53101390	MS.gene34567:intron	35.0%
!!	TCATTGATGATGGTAGTTTG+GGG	+	chr6.3:53101653-53101672	MS.gene34567:intron	35.0%
!!!	CTGCTTACATCGATTCTTTT+AGG	+	chr6.3:53102587-53102606	MS.gene34567:CDS	35.0%
!!!	TTGTGTTTTTTGGCAGGTTA+TGG	+	chr6.3:53100909-53100928	MS.gene34567:intron	35.0%
	AATCATTGAGAGCCTCAACT+CGG	-	chr6.3:53099560-53099579	None:intergenic	40.0%
	ACTGAAGCAGAAAGGAAACT+AGG	+	chr6.3:53102060-53102079	MS.gene34567:CDS	40.0%
	ATAACCAGAGCTCAGTAAGA+GGG	-	chr6.3:53102674-53102693	None:intergenic	40.0%
	ATCATAACCAACCTGTTGTG+AGG	-	chr6.3:53099817-53099836	None:intergenic	40.0%
	ATTAATCGGCAGAGTAGGAA+TGG	-	chr6.3:53099998-53100017	None:intergenic	40.0%
	CACAATACAGTTTCCTCACT+TGG	-	chr6.3:53099966-53099985	None:intergenic	40.0%
	CAGAGTTCTATATCCTTCAC+CGG	+	chr6.3:53102206-53102225	MS.gene34567:CDS	40.0%
	CAGGACCAATCTCAAAAACA+CGG	-	chr6.3:53100720-53100739	None:intergenic	40.0%
	CTACAATCAAGATGAGAGTG+TGG	+	chr6.3:53100119-53100138	MS.gene34567:intron	40.0%
	CTAGATCCAGCAATCAACTT+AGG	-	chr6.3:53100592-53100611	None:intergenic	40.0%
	CTATTGTTGAGGAATTCCTG+GGG	+	chr6.3:53101820-53101839	MS.gene34567:intron	40.0%
	CTCCCTTACATGAATGTTGA+TGG	+	chr6.3:53100241-53100260	MS.gene34567:intron	40.0%
	GACAGGGATAAAAGACGTAA+AGG	-	chr6.3:53101349-53101368	None:intergenic	40.0%
	GACATTTGCTTGTGAAGTTG+AGG	-	chr6.3:53100679-53100698	None:intergenic	40.0%
	GCACGTTCTTCCAAAAATTC+AGG	-	chr6.3:53102535-53102554	None:intergenic	40.0%
	GCAGCATCCTCGATATTAAT+CGG	-	chr6.3:53100012-53100031	None:intergenic	40.0%
	GGAAGATACTGCACATTCAT+AGG	-	chr6.3:53101194-53101213	None:intergenic	40.0%
	TATAACCAGAGCTCAGTAAG+AGG	-	chr6.3:53102675-53102694	None:intergenic	40.0%
	TCATTACTCGCTGCTAAACA+AGG	-	chr6.3:53101988-53102007	None:intergenic	40.0%
	TCGATATTAATCGGCAGAGT+AGG	-	chr6.3:53100003-53100022	None:intergenic	40.0%
	TCTTTAGGCTGGACTACAAA+GGG	+	chr6.3:53100629-53100648	MS.gene34567:CDS	40.0%
	TGAAATTGAGAAGGCCATTC+AGG	+	chr6.3:53100044-53100063	MS.gene34567:CDS	40.0%
	TTAGGCGAGGAGATAATATC+AGG	+	chr6.3:53102490-53102509	MS.gene34567:intron	40.0%
	TTGATTGCTGGATCTAGTGA+GGG	+	chr6.3:53100595-53100614	MS.gene34567:CDS	40.0%
!	AAAATGGTCTTACAGCCAAC+GGG	-	chr6.3:53102234-53102253	None:intergenic	40.0%
!	AACACCTTTAGGGGTTCAAA+CGG	-	chr6.3:53101021-53101040	None:intergenic	40.0%
!	ACAACTTGTTCGTGTGAATC+AGG	+	chr6.3:53100292-53100311	MS.gene34567:CDS	40.0%
!	ACACATTTGGAGAAGCATGA+TGG	-	chr6.3:53102402-53102421	None:intergenic	40.0%
!	ATGCATTTTGCGGTGTGATA+CGG	+	chr6.3:53100508-53100527	MS.gene34567:intron	40.0%
!	CCCAAAAGCTTCAGCTTTTA+TGG	-	chr6.3:53102433-53102452	None:intergenic	40.0%
!	GAATCTTCTGCTCTAAACAC+AGG	-	chr6.3:53100739-53100758	None:intergenic	40.0%
!	GATTTTGCTTTGCAGGAAGT+TGG	+	chr6.3:53102006-53102025	MS.gene34567:intron	40.0%
!	GGAGTAGAGATTGAACCTTT+TGG	+	chr6.3:53102027-53102046	MS.gene34567:CDS	40.0%
!	GTTGCTGCTTGTAAGTTTGT+TGG	+	chr6.3:53100453-53100472	MS.gene34567:intron	40.0%
!	GTTTGCGTTTGAAATTGTCG+AGG	+	chr6.3:53100861-53100880	MS.gene34567:intron	40.0%
!	TACTCTGCCGATTAATATCG+AGG	+	chr6.3:53100002-53100021	MS.gene34567:CDS	40.0%
!	TATCCACGTGCCTGAATTTT+TGG	+	chr6.3:53102522-53102541	MS.gene34567:CDS	40.0%
!	TATGTAAGCCGCAGAGTATT+TGG	-	chr6.3:53101215-53101234	None:intergenic	40.0%
!	TGTTGTGAGGCACCTTTAAT+AGG	-	chr6.3:53099804-53099823	None:intergenic	40.0%
!!	AGAAGGTATTCAGATGCTCA+AGG	+	chr6.3:53101238-53101257	MS.gene34567:CDS	40.0%
!!	ATGTGATAGGATGATGATGG+CGG	+	chr6.3:53101315-53101334	MS.gene34567:intron	40.0%
!!	CGGAAAATTCCTTGATTTGC+TGG	-	chr6.3:53100356-53100375	None:intergenic	40.0%
!!	TAGTTTGGGTTGTCATAGCA+AGG	-	chr6.3:53102265-53102284	None:intergenic	40.0%
!!	TATTAAAGGTGCCTCACAAC+AGG	+	chr6.3:53099803-53099822	MS.gene34567:CDS	40.0%
!!	TGGAAGTTTAAGCACTGGTA+GGG	+	chr6.3:53101391-53101410	MS.gene34567:intron	40.0%
!!!	ATTTTTTAACTGGTGCAGGC+TGG	+	chr6.3:53100266-53100285	MS.gene34567:intron	40.0%
!!!	GGTGATTTTTTAACTGGTGC+AGG	+	chr6.3:53100262-53100281	MS.gene34567:intron	40.0%
!!!	TTTGGCCGTGTTTTTGAGAT+TGG	+	chr6.3:53100712-53100731	MS.gene34567:CDS	40.0%
	AAGCAAAAAGGCCTCCAAGA+AGG	+	chr6.3:53099374-53099393	MS.gene34567:CDS	45.0%
	AGATATGGTGTACCACCACA+CGG	+	chr6.3:53102797-53102816	MS.gene34567:intron	45.0%
	ATCATTGAGAGCCTCAACTC+GGG	-	chr6.3:53099559-53099578	None:intergenic	45.0%
	ATCTGCGGACTCACTAAATC+AGG	-	chr6.3:53099708-53099727	None:intergenic	45.0%
	ATTCCAGCCGCTCCTATTAA+AGG	+	chr6.3:53099789-53099808	MS.gene34567:CDS	45.0%
	CACAAGCTATTCGACCAGTT+GGG	+	chr6.3:53099616-53099635	MS.gene34567:CDS	45.0%
	CAGCAATCAACTTAGGAGTG+TGG	-	chr6.3:53100585-53100604	None:intergenic	45.0%
	CGACATCGACAATAGACTCA+CGG	-	chr6.3:53099755-53099774	None:intergenic	45.0%
	CGTGTAGTAATGCTCTTCTG+TGG	+	chr6.3:53102842-53102861	MS.gene34567:CDS	45.0%
	CTGCGGCTTACATATGAAGA+AGG	+	chr6.3:53101221-53101240	MS.gene34567:CDS	45.0%
	CTTCCAAAAATTCAGGCACG+TGG	-	chr6.3:53102528-53102547	None:intergenic	45.0%
	GAGTCTATTGTCGATGTCGA+AGG	+	chr6.3:53099756-53099775	MS.gene34567:CDS	45.0%
	GCACAGATGCCTATGAGTAA+AGG	-	chr6.3:53100761-53100780	None:intergenic	45.0%
	GTCTTTAGGCTGGACTACAA+AGG	+	chr6.3:53100628-53100647	MS.gene34567:CDS	45.0%
	GTTGATTGCTGGATCTAGTG+AGG	+	chr6.3:53100594-53100613	MS.gene34567:CDS	45.0%
	TAACCAGAGCTCAGTAAGAG+GGG	-	chr6.3:53102673-53102692	None:intergenic	45.0%
	TAAGAAGGATCTCGAAGCTG+TGG	+	chr6.3:53100984-53101003	MS.gene34567:CDS	45.0%
	TATTGTCGATGTCGAAGGTG+TGG	+	chr6.3:53099761-53099780	MS.gene34567:CDS	45.0%
	TCCAGTCGTTGACATTGACA+GGG	-	chr6.3:53099536-53099555	None:intergenic	45.0%
	TGAGGCTCTCAATGATTCAC+TGG	+	chr6.3:53099563-53099582	MS.gene34567:CDS	45.0%
	TGATTCACTGGAGAACAAGC+CGG	+	chr6.3:53099575-53099594	MS.gene34567:CDS	45.0%
	TGATTTAGTGAGTCCGCAGA+TGG	+	chr6.3:53099707-53099726	MS.gene34567:CDS	45.0%
	TTCCAACTTGAGACTGGATG+CGG	-	chr6.3:53100376-53100395	None:intergenic	45.0%
	TTCGATTGGAGCTCAATGAG+CGG	-	chr6.3:53099510-53099529	None:intergenic	45.0%
	TTTAATAGGAGCGGCTGGAA+TGG	-	chr6.3:53099790-53099809	None:intergenic	45.0%
!	ACACCTTTAGGGGTTCAAAC+GGG	-	chr6.3:53101020-53101039	None:intergenic	45.0%
!	GATCCCCTTGCTGTCAATTA+TGG	+	chr6.3:53099477-53099496	MS.gene34567:CDS	45.0%
!	TGAGGCACCTTTAATAGGAG+CGG	-	chr6.3:53099799-53099818	None:intergenic	45.0%
!!	CACACTCCTAAGTTGATTGC+TGG	+	chr6.3:53100583-53100602	MS.gene34567:CDS	45.0%
!!	GTGGAAGTTTAAGCACTGGT+AGG	+	chr6.3:53101390-53101409	MS.gene34567:intron	45.0%
	AACGCCATCTTCTTCCCAAC+TGG	-	chr6.3:53099633-53099652	None:intergenic	50.0%
	AATAGACTCACGGCTGAGAG+CGG	-	chr6.3:53099745-53099764	None:intergenic	50.0%
	AGAAAGGAAACTAGGCCAGC+TGG	+	chr6.3:53102068-53102087	MS.gene34567:CDS	50.0%
	AGAGAGAGTCGATGTAGCAG+AGG	-	chr6.3:53099448-53099467	None:intergenic	50.0%
	AGGCATCTGTGCGAGTTTAC+AGG	+	chr6.3:53100769-53100788	MS.gene34567:CDS	50.0%
	AGGGGTGGAAGTTTAAGCAC+TGG	+	chr6.3:53101386-53101405	MS.gene34567:intron	50.0%
	ATCTCCTCGCCTAAGCAACA+AGG	-	chr6.3:53102484-53102503	None:intergenic	50.0%
	ATTGCTGGATCTAGTGAGGG+TGG	+	chr6.3:53100598-53100617	MS.gene34567:CDS	50.0%
	CATTGACAGGGGTCTTCGAT+TGG	-	chr6.3:53099524-53099543	None:intergenic	50.0%
	CCAGTCGTTGACATTGACAG+GGG	-	chr6.3:53099535-53099554	None:intergenic	50.0%
	CTGCGAACACCAGCAAATCA+AGG	+	chr6.3:53100344-53100363	MS.gene34567:CDS	50.0%
	GAAGAACGTGCACAAGCTTG+CGG	+	chr6.3:53102544-53102563	MS.gene34567:CDS	50.0%
	GATCCTTCCGATGACAGTGT+CGG	-	chr6.3:53099345-53099364	None:intergenic	50.0%
	GCACAAGCTATTCGACCAGT+TGG	+	chr6.3:53099615-53099634	MS.gene34567:CDS	50.0%
	GCGGCAAATTTCACCATCTG+CGG	-	chr6.3:53099723-53099742	None:intergenic	50.0%
	GTACCCGTTTGAACCCCTAA+AGG	+	chr6.3:53101014-53101033	MS.gene34567:CDS	50.0%
	GTCCAGTCGTTGACATTGAC+AGG	-	chr6.3:53099537-53099556	None:intergenic	50.0%
	TCAAGAGCCGACACTGTCAT+CGG	+	chr6.3:53099335-53099354	MS.gene34567:CDS	50.0%
	TCGACCAGTTGGGAAGAAGA+TGG	+	chr6.3:53099626-53099645	MS.gene34567:CDS	50.0%
	TCGATTGGAGCTCAATGAGC+GGG	-	chr6.3:53099509-53099528	None:intergenic	50.0%
	TGGTTTCACCGTACAGTGCT+TGG	+	chr6.3:53099671-53099690	MS.gene34567:CDS	50.0%
	TTCCGCATCCAGTCTCAAGT+TGG	+	chr6.3:53100371-53100390	MS.gene34567:CDS	50.0%
	TTGCGGTGTGATACGGTGTT+GGG	+	chr6.3:53100515-53100534	MS.gene34567:intron	50.0%
	TTTATCCACGTGACCCACTC+AGG	+	chr6.3:53102891-53102910	MS.gene34567:CDS	50.0%
	TTTGCGGTGTGATACGGTGT+TGG	+	chr6.3:53100514-53100533	MS.gene34567:intron	50.0%
!	AACAAGCCGGTTCTAATCCG+TGG	+	chr6.3:53099588-53099607	MS.gene34567:CDS	50.0%
!	ACAAGCCGGTTCTAATCCGT+GGG	+	chr6.3:53099589-53099608	MS.gene34567:CDS	50.0%
!	CAATCCTTGTTGCTTAGGCG+AGG	+	chr6.3:53102477-53102496	MS.gene34567:intron	50.0%
!	TGCCTGAACCAAGCACTGTA+CGG	-	chr6.3:53099682-53099701	None:intergenic	50.0%
!!	AAAGGTGCCTCACAACAGGT+TGG	+	chr6.3:53099807-53099826	MS.gene34567:intron	50.0%
!!	CTTGATTTGCTGGTGTTCGC+AGG	-	chr6.3:53100346-53100365	None:intergenic	50.0%
!!!	GCGTTGCTTTTCCAGCTTTG+CGG	-	chr6.3:53099403-53099422	None:intergenic	50.0%
	AGGGTGGAGCTGCTGTCTTT+AGG	+	chr6.3:53100614-53100633	MS.gene34567:CDS	55.0%
	AGTCGATGTAGCAGAGGTGG+CGG	-	chr6.3:53099442-53099461	None:intergenic	55.0%
	CAAGAAGGATGCCGCAAAGC+TGG	+	chr6.3:53099389-53099408	MS.gene34567:CDS	55.0%
	CACCGTACAGTGCTTGGTTC+AGG	+	chr6.3:53099677-53099696	MS.gene34567:CDS	55.0%
	CAGCTTTGCGGCATCCTTCT+TGG	-	chr6.3:53099391-53099410	None:intergenic	55.0%
	CCCCTGTCAATGTCAACGAC+TGG	+	chr6.3:53099532-53099551	MS.gene34567:CDS	55.0%
	CTTTGCGGCATCCTTCTTGG+AGG	-	chr6.3:53099388-53099407	None:intergenic	55.0%
	GAAGTTGAGGTGACTGAGCC+AGG	-	chr6.3:53100666-53100685	None:intergenic	55.0%
	GAGAGTCGATGTAGCAGAGG+TGG	-	chr6.3:53099445-53099464	None:intergenic	55.0%
	GCACCTTTAATAGGAGCGGC+TGG	-	chr6.3:53099795-53099814	None:intergenic	55.0%
	GTCTTACAGCCAACGGGTAC+CGG	-	chr6.3:53102228-53102247	None:intergenic	55.0%
	TATCCTTCACCGGTACCCGT+TGG	+	chr6.3:53102216-53102235	MS.gene34567:CDS	55.0%
	TATGGTGTACCACCACACGG+TGG	+	chr6.3:53102800-53102819	MS.gene34567:CDS	55.0%
	TGCACAAGCTTGCGGCATTG+AGG	+	chr6.3:53102552-53102571	MS.gene34567:CDS	55.0%
	TGGAGCTGCTGTCTTTAGGC+TGG	+	chr6.3:53100618-53100637	MS.gene34567:CDS	55.0%
!	GAATAGCTTGTGCCCTCCCA+CGG	-	chr6.3:53099608-53099627	None:intergenic	55.0%
!	GGTGTGATACGGTGTTGGGT+AGG	+	chr6.3:53100519-53100538	MS.gene34567:intron	55.0%
	ACTCCAAAGCCACCGTGTGG+TGG	-	chr6.3:53102812-53102831	None:intergenic	60.0%
	CAAAGGGCAACCTGCATGCC+TGG	+	chr6.3:53100645-53100664	MS.gene34567:CDS	60.0%
	CAACGACTGGACCCGAGTTG+AGG	+	chr6.3:53099545-53099564	MS.gene34567:CDS	60.0%
	CCTACTCCAAAGCCACCGTG+TGG	-	chr6.3:53102815-53102834	None:intergenic	60.0%
	CTGCCCCTCTTACTGAGCTC+TGG	+	chr6.3:53102667-53102686	MS.gene34567:intron	60.0%
	GAGCCGACACTGTCATCGGA+AGG	+	chr6.3:53099339-53099358	MS.gene34567:CDS	60.0%
	GCAATCCTGAGTGGGTCACG+TGG	-	chr6.3:53102899-53102918	None:intergenic	60.0%
	GTACCACCACACGGTGGCTT+TGG	+	chr6.3:53102806-53102825	MS.gene34567:CDS	60.0%
!	AGCCGGTTCTAATCCGTGGG+AGG	+	chr6.3:53099592-53099611	MS.gene34567:CDS	60.0%
!	GCCGGTTCTAATCCGTGGGA+GGG	+	chr6.3:53099593-53099612	MS.gene34567:CDS	60.0%
!!	CCACACGGTGGCTTTGGAGT+AGG	+	chr6.3:53102812-53102831	MS.gene34567:CDS	60.0%
!!	CGGTGGCTTTGGAGTAGGCT+TGG	+	chr6.3:53102817-53102836	MS.gene34567:CDS	60.0%
!!	GCCCTCCCACGGATTAGAAC+CGG	-	chr6.3:53099597-53099616	None:intergenic	60.0%
	AGACTCACGGCTGAGAGCGG+CGG	-	chr6.3:53099742-53099761	None:intergenic	65.0%
	GGTGACTGAGCCAGGCATGC+AGG	-	chr6.3:53100658-53100677	None:intergenic	65.0%
!	AGGTGGCGGCGGCAACTTCT+CGG	-	chr6.3:53099428-53099447	None:intergenic	65.0%
!	CGATGTAGCAGAGGTGGCGG+CGG	-	chr6.3:53099439-53099458	None:intergenic	65.0%
!!	CAGCCAACGGGTACCGGTGA+AGG	-	chr6.3:53102222-53102241	None:intergenic	65.0%
	TGGCGGCGGCAACTTCTCGG+CGG	-	chr6.3:53099425-53099444	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	53099318	53102925	53099318	ID=MS.gene34567
chr6.3	mRNA	53099318	53102925	53099318	ID=MS.gene34567.t1;Parent=MS.gene34567
chr6.3	exon	53099318	53099824	53099318	ID=MS.gene34567.t1.exon1;Parent=MS.gene34567.t1
chr6.3	CDS	53099318	53099824	53099318	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53099955	53100065	53099955	ID=MS.gene34567.t1.exon2;Parent=MS.gene34567.t1
chr6.3	CDS	53099955	53100065	53099955	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53100284	53100397	53100284	ID=MS.gene34567.t1.exon3;Parent=MS.gene34567.t1
chr6.3	CDS	53100284	53100397	53100284	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53100541	53100831	53100541	ID=MS.gene34567.t1.exon4;Parent=MS.gene34567.t1
chr6.3	CDS	53100541	53100831	53100541	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53100925	53101035	53100925	ID=MS.gene34567.t1.exon5;Parent=MS.gene34567.t1
chr6.3	CDS	53100925	53101035	53100925	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53101206	53101259	53101206	ID=MS.gene34567.t1.exon6;Parent=MS.gene34567.t1
chr6.3	CDS	53101206	53101259	53101206	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53102021	53102100	53102021	ID=MS.gene34567.t1.exon7;Parent=MS.gene34567.t1
chr6.3	CDS	53102021	53102100	53102021	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53102198	53102313	53102198	ID=MS.gene34567.t1.exon8;Parent=MS.gene34567.t1
chr6.3	CDS	53102198	53102313	53102198	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53102494	53102608	53102494	ID=MS.gene34567.t1.exon9;Parent=MS.gene34567.t1
chr6.3	CDS	53102494	53102608	53102494	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1
chr6.3	exon	53102799	53102925	53102799	ID=MS.gene34567.t1.exon10;Parent=MS.gene34567.t1
chr6.3	CDS	53102799	53102925	53102799	ID=cds.MS.gene34567.t1;Parent=MS.gene34567.t1

Gene Sequence

>MS.gene34567

ATGTCAACTTCAGAATCTCAAGAGCCGACACTGTCATCGGAAGGATCAGAAACAAAAAGCAAAAAGGCCTCCAAGAAGGATGCCGCAAAGCTGGAAAAGCAACGCCGCCGAGAAGTTGCCGCCGCCACCTCTGCTACATCGACTCTCTCTGTCGAAGATGATCCCCTTGCTGTCAATTATGGTATTGTCCCGCTCATTGAGCTCCAATCGAAGACCCCTGTCAATGTCAACGACTGGACCCGAGTTGAGGCTCTCAATGATTCACTGGAGAACAAGCCGGTTCTAATCCGTGGGAGGGCACAAGCTATTCGACCAGTTGGGAAGAAGATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTCAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGGTTATGATATCTTGTTACTTAGGTTTTGTGATTTTGTCAGTGTTTTGAATTTAGAGTTTGTGAGTTGTGATTGTTTAGGATTTTGATTTTGATTATAATGGTGTTATGTGGTTTTGTTCTCTATAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGTATATATATTCATTACCGATTAGAAATGTTGTAATTGAAGTTGTAGCAAACACTACAATCAAGATGAGAGTGTGGTGTTTCAGCTGCAATTACTATCTTGCATGTCGCAGTTTAAAACCTTTCTGATTAAAGATGTGTGTTTGTTGTTGTTTTGTTTAATATACTGGAACTTGTCTCCCTTACATGAATGTTGATGGTGATTTTTTAACTGGTGCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCGCATCCAGTCTCAAGTTGGAAATGTAAAGCCTATTTTCTCTAATATTATTCTGACAAGTTTTTTTTTATTTAATCATAGTTGCTGCTTGTAAGTTTGTTGGAATAATTGCCTACCGATAAACTAACTTAAGAAATGCATTTTGCGGTGTGATACGGTGTTGGGTAGGCGTTCAGACAATTTTTATTAGCTGAAAGCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCTGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTACATTTGGCTAAATGAAAATTTTGAGTGTTTGCGTTTGAAATTGTCGAGGGACATAATATGATTTACTGATACTTTTGTGTTTTTTGGCAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGGTGTTAATTTGTTTGGGATTTGTTATTTATTATACTATCTGTTTCATATTGTTCAATTTATTTGTTTTGTAGTGGGTATATCATGTTTATTTGTGCAATATACTAATATTAGACGCAAATGAATGCATTGTTACATTTTGTGATCTGATTATATCCCTATGAATGTGCAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGTAAGCTTAAATATTTCTTAACTAATTAACTTGCAAGTTGTCGATAAACAAACAAATGTGATAGGATGATGATGGCGGTGCTTGAACCTTTACGTCTTTTATCCCTGTCTATTTTGTAAAATTGAGAGGGGTGGAAGTTTAAGCACTGGTAGGGACTAGCCTGTGTACAGTTTAATCTTATAGATTATCATACTGAATATTCACTCTCACCAATCTTGTTGTAAAGTTTAAAATTGTATAATAGTCAAATTATTGAAACTATATTATATAAATGTCATTGAAAGGTGATAGTGATACATAATGTAAATTGATGAAAATGTACTTGGGTAAACAGGATACTAGAACTAATGTCAGCTTCAGATTGTCCATAAAATGAGATCTCATTTAGTCATTTCATTGATGATGGTAGTTTGGGGAACAAATAAAAGCTTTACCCTCCAATTTTTGAAAATTCCAACCAAATAATTGTAACTATTGGGGAGCCTTTTCAATTTAATTCAAGAAAAGGACATAGTTATTTGATTGGTGAGCAAGTTAGTGACACTTGTTTAGGTTCCTAACTATTGTTGAGGAATTCCTGGGGTATTTTTCCTCTTTTAGTTAGTTTTGGGAGTTTGGTTGCACTGTTTAGAATCATTTACATCAAGACTCAGAAAAGAACTTATTCTACTGTAACTATGATATATATAGGATGGTAGAAATTTACAGTATTCTTGTCTTAGTATCCTTGTTTAGCAGCGAGTAATGATTTTGCTTTGCAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTAATTCCCTGTCTCAAATCTTTTATAACTAAATATTGTCTTTTGTTATTATATGCTATAATTTCAAATTGTTTTTCGACTGTAATTCTATTTATAGGTATGGAACAGAGTTCTATATCCTTCACCGGTACCCGTTGGCTGTAAGACCATTTTATACAATGCCTTGCTATGACAACCCAAACTACAGTAACTCTTTTGATGTCTTCATTCGAGGTAAGCAGAGAAATTAAGTTATTTTGTCATGCAATGCTTTGTTATGACAATTTGGTGCACGCAATTAATCATGTTTTGGTTTTAACCATCATGCTTCTCCAAATGTGTTTGTACTTCCATAAAAGCTGAAGCTTTTGGGTGTCATTTGATTTTAACTTCTATTCAATCCTTGTTGCTTAGGCGAGGAGATAATATCAGGAGCTCAGCGTATCCACGTGCCTGAATTTTTGGAAGAACGTGCACAAGCTTGCGGCATTGAGGTCAAGACAATATCTGCTTACATCGATTCTTTTAGGTAATATATTTACTTATTCCTATCATGTTCAATGTCTTTGTTAATACGGGTGTTTAGGCTGCCCCTCTTACTGAGCTCTGGTTATAATGATTTTATGGGGTAAAAGATTGCTTACCAGAAAACTAAATTATAATGATTTTATGGGGTAAAAGATTGCTTACCAGAAAACTAAATGATTGATCATTTACAGATATGGTGTACCACCACACGGTGGCTTTGGAGTAGGCTTGGAGCGTGTAGTAATGCTCTTCTGTGGCTTGAACAACATTCGCAAAACATCACTTTATCCACGTGACCCACTCAGGATTGCACCATGA

Protein sequence

>MS.gene34567.t1

MSTSESQEPTLSSEGSETKSKKASKKDAAKLEKQRRREVAAATSATSTLSVEDDPLAVNYGIVPLIELQSKTPVNVNDWTRVEALNDSLENKPVLIRGRAQAIRPVGKKMAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFRIQSQVGNAFRQFLLAESFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPNYSNSFDVFIRGEEIISGAQRIHVPEFLEERAQACGIEVKTISAYIDSFRYGVPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP